Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:04:12 (1674113): wrapper (7.7.26015): starting
12:04:12 (1674113): wrapper: running run_atlas (--nthreads 4)
[2024-06-12 12:04:12] Arguments: --nthreads 4
[2024-06-12 12:04:12] Threads: 4
[2024-06-12 12:04:12] Checking for CVMFS
[2024-06-12 12:04:12] No cvmfs_config command found, will try listing directly
[2024-06-12 12:04:12] CVMFS is ok
[2024-06-12 12:04:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-12 12:04:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-12 12:04:12] Further information can be found at the LHC@home message board.
[2024-06-12 12:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-12 12:04:12] Checking for apptainer binary...
[2024-06-12 12:04:12] which: no apptainer in ((null))
[2024-06-12 12:04:12] apptainer is not installed, using version from CVMFS
[2024-06-12 12:04:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-12 12:04:13] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-06-12 12:04:13] apptainer works
[2024-06-12 12:04:13] Set ATHENA_PROC_NUMBER=4
[2024-06-12 12:04:13] Set ATHENA_CORE_NUMBER=4
[2024-06-12 12:04:13] Starting ATLAS job with PandaID=6223401668
[2024-06-12 12:04:13] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-12 19:19:42]  *** The last 200 lines of the pilot log: ***
[2024-06-12 19:19:42] 2024-06-12 17:19:21,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-06-12 19:19:42] 2024-06-12 17:19:21,546 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-12 19:19:42] 2024-06-12 17:19:21,550 | INFO     | fitting pss+swap vs Time
[2024-06-12 19:19:42] 2024-06-12 17:19:21,551 | INFO     | model: linear, x: [1718186686.0, 1718186747.0, 1718186808.0, 1718186869.0, 1718186930.0, 1718186991.0, 1718187052.0, 1718187113.0, 1718187174.0, 1718187235.0, 1718
[2024-06-12 19:19:42] 2024-06-12 17:19:21,551 | INFO     | sum of square deviations: 24311253967.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,554 | INFO     | sum of deviations: 177886434965.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,554 | INFO     | mean x: 1718199709.5
[2024-06-12 19:19:42] 2024-06-12 17:19:21,554 | INFO     | mean y: 2324116.2242990653
[2024-06-12 19:19:42] 2024-06-12 17:19:21,554 | INFO     | -- intersect: -12569813104.4939
[2024-06-12 19:19:42] 2024-06-12 17:19:21,554 | INFO     | intersect: -12569813104.4939
[2024-06-12 19:19:42] 2024-06-12 17:19:21,554 | INFO     | chi2: 4.7874065625186395
[2024-06-12 19:19:42] 2024-06-12 17:19:21,555 | INFO     | model: linear, x: [1718186686.0, 1718186747.0, 1718186808.0, 1718186869.0, 1718186930.0, 1718186991.0, 1718187052.0, 1718187113.0, 1718187174.0, 1718187235.0, 1718
[2024-06-12 19:19:42] 2024-06-12 17:19:21,555 | INFO     | sum of square deviations: 23469135852.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,557 | INFO     | sum of deviations: 202520070821.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,557 | INFO     | mean x: 1718199557.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,557 | INFO     | mean y: 2328531.1063829786
[2024-06-12 19:19:42] 2024-06-12 17:19:21,557 | INFO     | -- intersect: -14824374001.215338
[2024-06-12 19:19:42] 2024-06-12 17:19:21,558 | INFO     | intersect: -14824374001.215338
[2024-06-12 19:19:42] 2024-06-12 17:19:21,558 | INFO     | chi2: 4.023610113446132
[2024-06-12 19:19:42] 2024-06-12 17:19:21,558 | INFO     | current chi2=4.023610113446132 (change=15.954284205824298 %)
[2024-06-12 19:19:42] 2024-06-12 17:19:21,558 | INFO     | right removable region: 422
[2024-06-12 19:19:42] 2024-06-12 17:19:21,558 | INFO     | model: linear, x: [1718186991.0, 1718187052.0, 1718187113.0, 1718187174.0, 1718187235.0, 1718187296.0, 1718187357.0, 1718187418.0, 1718187479.0, 1718187540.0, 1718
[2024-06-12 19:19:42] 2024-06-12 17:19:21,558 | INFO     | sum of square deviations: 23469135852.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,561 | INFO     | sum of deviations: 82664133835.00003
[2024-06-12 19:19:42] 2024-06-12 17:19:21,561 | INFO     | mean x: 1718199862.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,561 | INFO     | mean y: 2341332.1300236406
[2024-06-12 19:19:42] 2024-06-12 17:19:21,561 | INFO     | -- intersect: -6049585941.346589
[2024-06-12 19:19:42] 2024-06-12 17:19:21,561 | INFO     | intersect: -6049585941.346589
[2024-06-12 19:19:42] 2024-06-12 17:19:21,562 | INFO     | chi2: 2.5653219699547405
[2024-06-12 19:19:42] 2024-06-12 17:19:21,562 | INFO     | current chi2=2.5653219699547405 (change=46.415205467631466 %)
[2024-06-12 19:19:42] 2024-06-12 17:19:21,562 | INFO     | model: linear, x: [1718187296.0, 1718187357.0, 1718187418.0, 1718187479.0, 1718187540.0, 1718187601.0, 1718187662.0, 1718187723.0, 1718187784.0, 1718187845.0, 1718
[2024-06-12 19:19:42] 2024-06-12 17:19:21,562 | INFO     | sum of square deviations: 22646692524.5
[2024-06-12 19:19:42] 2024-06-12 17:19:21,565 | INFO     | sum of deviations: -4414893208.5
[2024-06-12 19:19:42] 2024-06-12 17:19:21,565 | INFO     | mean x: 1718200014.5
[2024-06-12 19:19:42] 2024-06-12 17:19:21,565 | INFO     | mean y: 2357478.629186603
[2024-06-12 19:19:42] 2024-06-12 17:19:21,565 | INFO     | -- intersect: 337314539.8713174
[2024-06-12 19:19:42] 2024-06-12 17:19:21,565 | INFO     | intersect: 337314539.8713174
[2024-06-12 19:19:42] 2024-06-12 17:19:21,565 | INFO     | chi2: 0.889752122447683
[2024-06-12 19:19:42] 2024-06-12 17:19:21,566 | INFO     | current chi2=0.889752122447683 (change=65.31616175791841 %)
[2024-06-12 19:19:42] 2024-06-12 17:19:21,566 | INFO     | model: linear, x: [1718187601.0, 1718187662.0, 1718187723.0, 1718187784.0, 1718187845.0, 1718187906.0, 1718187967.0, 1718188028.0, 1718188089.0, 1718188150.0, 1718
[2024-06-12 19:19:42] 2024-06-12 17:19:21,566 | INFO     | sum of square deviations: 21843691422.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,569 | INFO     | sum of deviations: -21344280518.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,569 | INFO     | mean x: 1718200167.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,569 | INFO     | mean y: 2360679.9394673123
[2024-06-12 19:19:42] 2024-06-12 17:19:21,569 | INFO     | -- intersect: 1681277747.6648552
[2024-06-12 19:19:42] 2024-06-12 17:19:21,569 | INFO     | intersect: 1681277747.6648552
[2024-06-12 19:19:42] 2024-06-12 17:19:21,569 | INFO     | chi2: 0.7901783680701904
[2024-06-12 19:19:42] 2024-06-12 17:19:21,569 | INFO     | current chi2=0.7901783680701904 (change=11.191179190847897 %)
[2024-06-12 19:19:42] 2024-06-12 17:19:21,569 | INFO     | left removable region: 30
[2024-06-12 19:19:42] 2024-06-12 17:19:21,570 | INFO     | model: linear, x: [1718188516.0, 1718188577.0, 1718188638.0, 1718188699.0, 1718188760.0, 1718188821.0, 1718188882.0, 1718188943.0, 1718189004.0, 1718189065.0, 1718
[2024-06-12 19:19:42] 2024-06-12 17:19:21,570 | INFO     | sum of square deviations: 18678147418.0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,573 | INFO     | sum of deviations: 754361349.5000035
[2024-06-12 19:19:42] 2024-06-12 17:19:21,573 | INFO     | mean x: 1718200441.5
[2024-06-12 19:19:42] 2024-06-12 17:19:21,573 | INFO     | mean y: 2366501.1454081633
[2024-06-12 19:19:42] 2024-06-12 17:19:21,573 | INFO     | -- intersect: -67027104.9095669
[2024-06-12 19:19:42] 2024-06-12 17:19:21,573 | INFO     | intersect: -67027104.9095669
[2024-06-12 19:19:42] 2024-06-12 17:19:21,573 | INFO     | chi2: 0.002708795559535448
[2024-06-12 19:19:42] 2024-06-12 17:19:21,573 | INFO     | -- intersect: -67027104.9095669
[2024-06-12 19:19:42] 2024-06-12 17:19:21,573 | INFO     | current memory leak: 0.04 B/s (using 392 data points, chi2=0.00)
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | ..............................
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | . Timing measurements:
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | . get job = 0 s
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | . initial setup = 1 s
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | . payload setup = 5 s
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | . stage-in = 0 s
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | . payload execution = 26068 s
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | . stage-out = 1 s
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | . log creation = 0 s
[2024-06-12 19:19:42] 2024-06-12 17:19:21,574 | INFO     | ..............................
[2024-06-12 19:19:42] 2024-06-12 17:19:21,632 | INFO     | 
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | job summary report
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | --------------------------------------------------
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | PanDA job id: 6223401668
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | task id: 38920995
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | errors: (none)
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | pilot state: finished 
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | transexitcode: 0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | exeerrorcode: 0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | exeerrordiag: 
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | exitcode: 0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | exitmsg: OK
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | cpuconsumptiontime: 101490 s
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | nevents: 400
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | neventsw: 0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | pid: 1685774
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | pgrp: 1685774
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | corecount: 4
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | event service: False
[2024-06-12 19:19:42] 2024-06-12 17:19:21,633 | INFO     | sizes: {0: 2393366, 4: 2393572, 11: 2393600, 26077: 2429754, 26079: 2438736, 26081: 2438792, 26086: 2439090}
[2024-06-12 19:19:42] 2024-06-12 17:19:21,634 | INFO     | --------------------------------------------------
[2024-06-12 19:19:42] 2024-06-12 17:19:21,634 | INFO     | 
[2024-06-12 19:19:42] 2024-06-12 17:19:21,634 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,652 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,653 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,653 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,653 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,653 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,653 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-12 19:19:42] 2024-06-12 17:19:21,653 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,653 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-12 19:19:42] 2024-06-12 17:19:21,653 | INFO     | job 6223401668 has completed (purged errors)
[2024-06-12 19:19:42] 2024-06-12 17:19:21,653 | INFO     | overall cleanup function is called
[2024-06-12 19:19:42] 2024-06-12 17:19:22,660 | INFO     | --- collectZombieJob: --- 10, [1685774]
[2024-06-12 19:19:42] 2024-06-12 17:19:22,660 | INFO     | zombie collector waiting for pid 1685774
[2024-06-12 19:19:42] 2024-06-12 17:19:22,660 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-12 19:19:42] 2024-06-12 17:19:23,666 | INFO     | collected zombie processes
[2024-06-12 19:19:42] 2024-06-12 17:19:23,666 | INFO     | will now attempt to kill all subprocesses of pid=1685774
[2024-06-12 19:19:42] 2024-06-12 17:19:23,818 | INFO     | process IDs to be killed: [1685774] (in reverse order)
[2024-06-12 19:19:42] 2024-06-12 17:19:23,943 | WARNING  | found no corresponding commands to process id(s)
[2024-06-12 19:19:42] 2024-06-12 17:19:23,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-12 19:19:42] 2024-06-12 17:19:23,952 | INFO     | did not find any defunct processes belonging to 1685774
[2024-06-12 19:19:42] 2024-06-12 17:19:23,962 | INFO     | did not find any defunct processes belonging to 1685774
[2024-06-12 19:19:42] 2024-06-12 17:19:23,962 | INFO     | ready for new job
[2024-06-12 19:19:42] 2024-06-12 17:19:23,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-12 19:19:42] 2024-06-12 17:19:23,965 | INFO     | *************************************
[2024-06-12 19:19:42] 2024-06-12 17:19:23,965 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-12 19:19:42] 2024-06-12 17:19:23,965 | INFO     | *************************************
[2024-06-12 19:19:42] 2024-06-12 17:19:23,965 | INFO     | 
[2024-06-12 19:19:42] 2024-06-12 17:19:23,969 | INFO     | architecture information:
[2024-06-12 19:19:42] 2024-06-12 17:19:23,969 | INFO     | executing command: cat /etc/os-release
[2024-06-12 19:19:42] 2024-06-12 17:19:23,985 | INFO     | cat /etc/os-release:
[2024-06-12 19:19:42] NAME="CentOS Linux"
[2024-06-12 19:19:42] VERSION="7 (Core)"
[2024-06-12 19:19:42] ID="centos"
[2024-06-12 19:19:42] ID_LIKE="rhel fedora"
[2024-06-12 19:19:42] VERSION_ID="7"
[2024-06-12 19:19:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-12 19:19:42] ANSI_COLOR="0;31"
[2024-06-12 19:19:42] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-12 19:19:42] HOME_URL="https://www.centos.org/"
[2024-06-12 19:19:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-12 19:19:42] 
[2024-06-12 19:19:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-12 19:19:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-12 19:19:42] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-12 19:19:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-12 19:19:42] 
[2024-06-12 19:19:42] 2024-06-12 17:19:23,986 | INFO     | *************************************
[2024-06-12 19:19:42] 2024-06-12 17:19:24,488 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2024-06-12 19:19:42] 2024-06-12 17:19:24,510 | INFO     | sufficient remaining disk space (612840243200 B)
[2024-06-12 19:19:42] 2024-06-12 17:19:24,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-12 19:19:42] 2024-06-12 17:19:24,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-12 19:19:42] 2024-06-12 17:19:24,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-12 19:19:42] 2024-06-12 17:19:24,512 | INFO     | aborting loop
[2024-06-12 19:19:42] 2024-06-12 17:19:24,626 | INFO     | all job control threads have been joined
[2024-06-12 19:19:42] 2024-06-12 17:19:24,705 | INFO     | found 0 job(s) in 20 queues
[2024-06-12 19:19:42] 2024-06-12 17:19:24,705 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-12 19:19:42] 2024-06-12 17:19:24,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-12 19:19:42] 2024-06-12 17:19:24,744 | INFO     | all payload control threads have been joined
[2024-06-12 19:19:42] 2024-06-12 17:19:24,891 | INFO     | all data control threads have been joined
[2024-06-12 19:19:42] 2024-06-12 17:19:25,173 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-12 19:19:42] 2024-06-12 17:19:25,516 | INFO     | [job] retrieve thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:25,517 | INFO     | [job] job monitor thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:25,632 | INFO     | [job] control thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:25,656 | INFO     | [payload] validate_pre thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:25,751 | INFO     | [payload] control thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:25,896 | INFO     | [data] control thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:26,048 | INFO     | [payload] execute_payloads thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:26,201 | INFO     | [payload] failed_post thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:26,544 | INFO     | [data] copytool_in thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:26,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-12 19:19:42] 2024-06-12 17:19:26,827 | INFO     | [job] validate thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:26,854 | INFO     | [job] create_data_payload thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:27,012 | INFO     | [payload] validate_post thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:27,178 | INFO     | [data] copytool_out thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:27,626 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-12 19:19:42] 2024-06-12 17:19:27,649 | INFO     | [job] queue monitor thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:31,628 | INFO     | [data] queue_monitor thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:34,820 | INFO     | job.realtimelogging is not enabled
[2024-06-12 19:19:42] 2024-06-12 17:19:35,826 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-12 19:19:42] 2024-06-12 17:19:36,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47908768506944)>', '<ExcThread(monitor, started 47908943959808)>']
[2024-06-12 19:19:42] 2024-06-12 17:19:36,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-12 19:19:42] 2024-06-12 17:19:36,762 | INFO     | [monitor] control thread has ended
[2024-06-12 19:19:42] 2024-06-12 17:19:41,442 | INFO     | all workflow threads have been joined
[2024-06-12 19:19:42] 2024-06-12 17:19:41,443 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-12 19:19:42] 2024-06-12 17:19:41,443 | INFO     | traces error code: 0
[2024-06-12 19:19:42] 2024-06-12 17:19:41,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-12 19:19:42] 2024-06-12 17:19:41,521 [wrapper] ==== pilot stdout END ====
[2024-06-12 19:19:42] 2024-06-12 17:19:41,524 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-12 19:19:42] 2024-06-12 17:19:41,526 [wrapper] pilotpid: 1678450
[2024-06-12 19:19:42] 2024-06-12 17:19:41,529 [wrapper] Pilot exit status: 0
[2024-06-12 19:19:42] 2024-06-12 17:19:41,542 [wrapper] pandaids: 6223401668
[2024-06-12 19:19:42] 2024-06-12 17:19:41,632 [wrapper] cleanup supervisor_pilot 2596380 1678451
[2024-06-12 19:19:42] 2024-06-12 17:19:41,634 [wrapper] Test setup, not cleaning
[2024-06-12 19:19:42] 2024-06-12 17:19:41,637 [wrapper] ==== wrapper stdout END ====
[2024-06-12 19:19:42] 2024-06-12 17:19:41,639 [wrapper] ==== wrapper stderr END ====
[2024-06-12 19:19:42] 2024-06-12 17:19:41,643 [wrapper] apfmon messages muted
[2024-06-12 19:19:42]  *** Error codes and diagnostics ***
[2024-06-12 19:19:42]     "exeErrorCode": 0,
[2024-06-12 19:19:42]     "exeErrorDiag": "",
[2024-06-12 19:19:42]     "pilotErrorCode": 0,
[2024-06-12 19:19:42]     "pilotErrorDiag": "",
[2024-06-12 19:19:42]  *** Listing of results directory ***
[2024-06-12 19:19:42] total 973192
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc    469443 Jun  6 18:03 pilot3.tar.gz
[2024-06-12 19:19:42] -rwx------ 1 boinc boinc     32308 Jun  6 18:13 runpilot2-wrapper.sh
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc      5654 Jun  6 18:13 queuedata.json
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc       100 Jun 12 12:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-12 19:19:42] -rwxr-xr-x 1 boinc boinc      7986 Jun 12 12:04 run_atlas
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc       105 Jun 12 12:04 job.xml
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc      6663 Jun 12 12:04 init_data.xml
[2024-06-12 19:19:42] -rw-r--r-- 2 boinc boinc 632264989 Jun 12 12:04 EVNT.38776180._000963.pool.root.1
[2024-06-12 19:19:42] -rw-r--r-- 2 boinc boinc     17537 Jun 12 12:04 start_atlas.sh
[2024-06-12 19:19:42] drwxrwx--x 2 boinc boinc      4096 Jun 12 12:04 shared
[2024-06-12 19:19:42] -rw-r--r-- 2 boinc boinc    482038 Jun 12 12:04 input.tar.gz
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc         0 Jun 12 12:04 boinc_lockfile
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc      2615 Jun 12 12:04 pandaJob.out
[2024-06-12 19:19:42] -rw------- 1 boinc boinc       424 Jun 12 12:04 setup.sh.local
[2024-06-12 19:19:42] -rw------- 1 boinc boinc   1024957 Jun 12 12:04 agis_schedconf.cvmfs.json
[2024-06-12 19:19:42] -rw------- 1 boinc boinc   1324173 Jun 12 12:04 cric_ddmendpoints.json
[2024-06-12 19:19:42] drwx------ 4 boinc boinc      4096 Jun 12 12:04 pilot3
[2024-06-12 19:19:42] -rw------- 1 boinc boinc        95 Jun 12 19:18 pilot_heartbeat.json
[2024-06-12 19:19:42] -rw------- 1 boinc boinc 353896993 Jun 12 19:18 HITS.38920995._045094.pool.root.1
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc       532 Jun 12 19:18 boinc_task_state.xml
[2024-06-12 19:19:42] -rw------- 1 boinc boinc      1053 Jun 12 19:19 memory_monitor_summary.json
[2024-06-12 19:19:42] -rw------- 1 boinc boinc         0 Jun 12 19:19 agis_ddmendpoints.agis.ALL.json
[2024-06-12 19:19:42] -rw------- 1 boinc boinc    471538 Jun 12 19:19 log.38920995._045094.job.log.tgz.1
[2024-06-12 19:19:42] -rw------- 1 boinc boinc      7774 Jun 12 19:19 heartbeat.json
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc        29 Jun 12 19:19 wrapper_checkpoint.txt
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc      8192 Jun 12 19:19 boinc_mmap_file
[2024-06-12 19:19:42] -rw------- 1 boinc boinc      4293 Jun 12 19:19 pilotlog.txt
[2024-06-12 19:19:42] -rw------- 1 boinc boinc   2950967 Jun 12 19:19 log.38920995._045094.job.log.1
[2024-06-12 19:19:42] -rw------- 1 boinc boinc       357 Jun 12 19:19 output.list
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc       620 Jun 12 19:19 runtime_log
[2024-06-12 19:19:42] -rw------- 1 boinc boinc   3440640 Jun 12 19:19 result.tar.gz
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc     11410 Jun 12 19:19 runtime_log.err
[2024-06-12 19:19:42] -rw------- 1 boinc boinc       661 Jun 12 19:19 CNpLDm2uUZ5nsSi4ap6QjLDmwznN0nGgGQJmpmIZDmdXUKDm1dkT1n.diag
[2024-06-12 19:19:42] -rw-r--r-- 1 boinc boinc     21266 Jun 12 19:19 stderr.txt
[2024-06-12 19:19:42] HITS file was successfully produced:
[2024-06-12 19:19:42] -rw------- 1 boinc boinc 353896993 Jun 12 19:18 shared/HITS.pool.root.1
[2024-06-12 19:19:42]  *** Contents of shared directory: ***
[2024-06-12 19:19:42] total 966912
[2024-06-12 19:19:42] -rw-r--r-- 2 boinc boinc 632264989 Jun 12 12:04 ATLAS.root_0
[2024-06-12 19:19:42] -rw-r--r-- 2 boinc boinc     17537 Jun 12 12:04 start_atlas.sh
[2024-06-12 19:19:42] -rw-r--r-- 2 boinc boinc    482038 Jun 12 12:04 input.tar.gz
[2024-06-12 19:19:42] -rw------- 1 boinc boinc 353896993 Jun 12 19:18 HITS.pool.root.1
[2024-06-12 19:19:42] -rw------- 1 boinc boinc   3440640 Jun 12 19:19 result.tar.gz
19:19:43 (1674113): run_atlas exited; CPU time 100975.364379
19:19:43 (1674113): called boinc_finish(0)

</stderr_txt>
]]>

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