Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:38:06 (2572663): wrapper (7.7.26015): starting
22:38:06 (2572663): wrapper: running run_atlas (--nthreads 4)
[2024-06-12 22:38:06] Arguments: --nthreads 4
[2024-06-12 22:38:06] Threads: 4
[2024-06-12 22:38:06] Checking for CVMFS
[2024-06-12 22:38:06] No cvmfs_config command found, will try listing directly
[2024-06-12 22:38:06] CVMFS is ok
[2024-06-12 22:38:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-12 22:38:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-12 22:38:06] Further information can be found at the LHC@home message board.
[2024-06-12 22:38:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-12 22:38:06] Checking for apptainer binary...
[2024-06-12 22:38:06] which: no apptainer in ((null))
[2024-06-12 22:38:06] apptainer is not installed, using version from CVMFS
[2024-06-12 22:38:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-12 22:38:07] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut29.grid.cesnet.cz
[2024-06-12 22:38:07] apptainer works
[2024-06-12 22:38:07] Set ATHENA_PROC_NUMBER=4
[2024-06-12 22:38:07] Set ATHENA_CORE_NUMBER=4
[2024-06-12 22:38:07] Starting ATLAS job with PandaID=6223236056
[2024-06-12 22:38:07] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-13 09:08:33]  *** The last 200 lines of the pilot log: ***
[2024-06-13 09:08:33] 2024-06-13 07:08:19,739 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-06-13 09:08:33] 2024-06-13 07:08:19,751 | INFO     | fitting pss+swap vs Time
[2024-06-13 09:08:33] 2024-06-13 07:08:19,752 | INFO     | model: linear, x: [1718224717.0, 1718224778.0, 1718224839.0, 1718224900.0, 1718224961.0, 1718225022.0, 1718225083.0, 1718225144.0, 1718225205.0, 1718225266.0, 1718
[2024-06-13 09:08:33] 2024-06-13 07:08:19,753 | INFO     | sum of square deviations: 73901348415.0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,763 | INFO     | sum of deviations: 255038515683.49997
[2024-06-13 09:08:33] 2024-06-13 07:08:19,764 | INFO     | mean x: 1718243596.5
[2024-06-13 09:08:33] 2024-06-13 07:08:19,764 | INFO     | mean y: 2335473.314516129
[2024-06-13 09:08:33] 2024-06-13 07:08:19,764 | INFO     | -- intersect: -5927438554.260494
[2024-06-13 09:08:33] 2024-06-13 07:08:19,764 | INFO     | intersect: -5927438554.260494
[2024-06-13 09:08:33] 2024-06-13 07:08:19,765 | INFO     | chi2: 4.638068835350012
[2024-06-13 09:08:33] 2024-06-13 07:08:19,766 | INFO     | model: linear, x: [1718224717.0, 1718224778.0, 1718224839.0, 1718224900.0, 1718224961.0, 1718225022.0, 1718225083.0, 1718225144.0, 1718225205.0, 1718225266.0, 1718
[2024-06-13 09:08:33] 2024-06-13 07:08:19,766 | INFO     | sum of square deviations: 72127789580.0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,776 | INFO     | sum of deviations: 292362107657.0001
[2024-06-13 09:08:33] 2024-06-13 07:08:19,777 | INFO     | mean x: 1718243444.0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,777 | INFO     | mean y: 2338660.4292682926
[2024-06-13 09:08:33] 2024-06-13 07:08:19,777 | INFO     | -- intersect: -6962373244.383588
[2024-06-13 09:08:33] 2024-06-13 07:08:19,777 | INFO     | intersect: -6962373244.383588
[2024-06-13 09:08:33] 2024-06-13 07:08:19,778 | INFO     | chi2: 3.8490754728052163
[2024-06-13 09:08:33] 2024-06-13 07:08:19,778 | INFO     | current chi2=3.8490754728052163 (change=17.011247365095524 %)
[2024-06-13 09:08:33] 2024-06-13 07:08:19,778 | INFO     | right removable region: 614
[2024-06-13 09:08:33] 2024-06-13 07:08:19,779 | INFO     | model: linear, x: [1718225022.0, 1718225083.0, 1718225144.0, 1718225205.0, 1718225266.0, 1718225327.0, 1718225388.0, 1718225449.0, 1718225510.0, 1718225571.0, 1718
[2024-06-13 09:08:33] 2024-06-13 07:08:19,780 | INFO     | sum of square deviations: 72127789580.0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,790 | INFO     | sum of deviations: 109992883646.99997
[2024-06-13 09:08:33] 2024-06-13 07:08:19,790 | INFO     | mean x: 1718243749.0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,790 | INFO     | mean y: 2347932.743089431
[2024-06-13 09:08:33] 2024-06-13 07:08:19,790 | INFO     | -- intersect: -2617926248.144155
[2024-06-13 09:08:33] 2024-06-13 07:08:19,790 | INFO     | intersect: -2617926248.144155
[2024-06-13 09:08:33] 2024-06-13 07:08:19,791 | INFO     | chi2: 2.2766068397683448
[2024-06-13 09:08:33] 2024-06-13 07:08:19,791 | INFO     | current chi2=2.2766068397683448 (change=50.91476818074131 %)
[2024-06-13 09:08:33] 2024-06-13 07:08:19,792 | INFO     | model: linear, x: [1718225327.0, 1718225388.0, 1718225449.0, 1718225510.0, 1718225571.0, 1718225632.0, 1718225693.0, 1718225754.0, 1718225815.0, 1718225876.0, 1718
[2024-06-13 09:08:33] 2024-06-13 07:08:19,793 | INFO     | sum of square deviations: 70382835932.5
[2024-06-13 09:08:33] 2024-06-13 07:08:19,799 | INFO     | sum of deviations: -5109671557.500004
[2024-06-13 09:08:33] 2024-06-13 07:08:19,800 | INFO     | mean x: 1718243901.5
[2024-06-13 09:08:33] 2024-06-13 07:08:19,800 | INFO     | mean y: 2357991.995081967
[2024-06-13 09:08:33] 2024-06-13 07:08:19,800 | INFO     | -- intersect: 127099512.79373863
[2024-06-13 09:08:33] 2024-06-13 07:08:19,800 | INFO     | intersect: 127099512.79373863
[2024-06-13 09:08:33] 2024-06-13 07:08:19,800 | INFO     | chi2: 0.9073955403610504
[2024-06-13 09:08:33] 2024-06-13 07:08:19,801 | INFO     | current chi2=0.9073955403610504 (change=60.142633127932534 %)
[2024-06-13 09:08:33] 2024-06-13 07:08:19,801 | INFO     | model: linear, x: [1718225632.0, 1718225693.0, 1718225754.0, 1718225815.0, 1718225876.0, 1718225937.0, 1718225998.0, 1718226059.0, 1718226120.0, 1718226181.0, 1718
[2024-06-13 09:08:33] 2024-06-13 07:08:19,801 | INFO     | sum of square deviations: 68666254910.0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,806 | INFO     | sum of deviations: -24297871299.0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,807 | INFO     | mean x: 1718244054.0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,807 | INFO     | mean y: 2359691.0842975206
[2024-06-13 09:08:33] 2024-06-13 07:08:19,807 | INFO     | -- intersect: 610368281.8991714
[2024-06-13 09:08:33] 2024-06-13 07:08:19,807 | INFO     | intersect: 610368281.8991714
[2024-06-13 09:08:33] 2024-06-13 07:08:19,807 | INFO     | chi2: 0.8424003958786579
[2024-06-13 09:08:33] 2024-06-13 07:08:19,807 | INFO     | current chi2=0.8424003958786579 (change=7.162823883455623 %)
[2024-06-13 09:08:33] 2024-06-13 07:08:19,807 | INFO     | left removable region: 30
[2024-06-13 09:08:33] 2024-06-13 07:08:19,808 | INFO     | model: linear, x: [1718226547.0, 1718226608.0, 1718226669.0, 1718226730.0, 1718226791.0, 1718226852.0, 1718226913.0, 1718226974.0, 1718227035.0, 1718227096.0, 1718
[2024-06-13 09:08:33] 2024-06-13 07:08:19,808 | INFO     | sum of square deviations: 61761195210.0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,813 | INFO     | sum of deviations: 35677846987.49999
[2024-06-13 09:08:33] 2024-06-13 07:08:19,813 | INFO     | mean x: 1718244328.5
[2024-06-13 09:08:33] 2024-06-13 07:08:19,813 | INFO     | mean y: 2361141.8989726026
[2024-06-13 09:08:33] 2024-06-13 07:08:19,813 | INFO     | -- intersect: -990224219.0371257
[2024-06-13 09:08:33] 2024-06-13 07:08:19,813 | INFO     | intersect: -990224219.0371257
[2024-06-13 09:08:33] 2024-06-13 07:08:19,814 | INFO     | chi2: 0.016393791554263397
[2024-06-13 09:08:33] 2024-06-13 07:08:19,814 | INFO     | -- intersect: -990224219.0371257
[2024-06-13 09:08:33] 2024-06-13 07:08:19,814 | INFO     | current memory leak: 0.58 B/s (using 584 data points, chi2=0.02)
[2024-06-13 09:08:33] 2024-06-13 07:08:19,814 | INFO     | ..............................
[2024-06-13 09:08:33] 2024-06-13 07:08:19,815 | INFO     | . Timing measurements:
[2024-06-13 09:08:33] 2024-06-13 07:08:19,815 | INFO     | . get job = 0 s
[2024-06-13 09:08:33] 2024-06-13 07:08:19,815 | INFO     | . initial setup = 1 s
[2024-06-13 09:08:33] 2024-06-13 07:08:19,815 | INFO     | . payload setup = 4 s
[2024-06-13 09:08:33] 2024-06-13 07:08:19,815 | INFO     | . stage-in = 0 s
[2024-06-13 09:08:33] 2024-06-13 07:08:19,815 | INFO     | . payload execution = 37778 s
[2024-06-13 09:08:33] 2024-06-13 07:08:19,815 | INFO     | . stage-out = 1 s
[2024-06-13 09:08:33] 2024-06-13 07:08:19,815 | INFO     | . log creation = 0 s
[2024-06-13 09:08:33] 2024-06-13 07:08:19,815 | INFO     | ..............................
[2024-06-13 09:08:33] 2024-06-13 07:08:19,877 | WARNING  | process 2583787 is no longer using CPU - aborting
[2024-06-13 09:08:33] 2024-06-13 07:08:19,877 | INFO     | aborting job monitoring since job object (job id=6223236056) has expired
[2024-06-13 09:08:33] 2024-06-13 07:08:19,877 | INFO     | 
[2024-06-13 09:08:33] 2024-06-13 07:08:19,877 | INFO     | job summary report
[2024-06-13 09:08:33] 2024-06-13 07:08:19,877 | INFO     | --------------------------------------------------
[2024-06-13 09:08:33] 2024-06-13 07:08:19,878 | INFO     | PanDA job id: 6223236056
[2024-06-13 09:08:33] 2024-06-13 07:08:19,878 | INFO     | task id: 38921001
[2024-06-13 09:08:33] 2024-06-13 07:08:19,878 | INFO     | errors: (none)
[2024-06-13 09:08:33] 2024-06-13 07:08:19,878 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-13 09:08:33] 2024-06-13 07:08:19,878 | INFO     | pilot state: finished 
[2024-06-13 09:08:33] 2024-06-13 07:08:19,878 | INFO     | transexitcode: 0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,878 | INFO     | exeerrorcode: 0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,878 | INFO     | exeerrordiag: 
[2024-06-13 09:08:33] 2024-06-13 07:08:19,878 | INFO     | exitcode: 0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,879 | INFO     | exitmsg: OK
[2024-06-13 09:08:33] 2024-06-13 07:08:19,879 | INFO     | cpuconsumptiontime: 147934 s
[2024-06-13 09:08:33] 2024-06-13 07:08:19,879 | INFO     | nevents: 400
[2024-06-13 09:08:33] 2024-06-13 07:08:19,879 | INFO     | neventsw: 0
[2024-06-13 09:08:33] 2024-06-13 07:08:19,879 | INFO     | pid: 2583787
[2024-06-13 09:08:33] 2024-06-13 07:08:19,879 | INFO     | pgrp: 2583787
[2024-06-13 09:08:33] 2024-06-13 07:08:19,879 | INFO     | corecount: 4
[2024-06-13 09:08:33] 2024-06-13 07:08:19,879 | INFO     | event service: False
[2024-06-13 09:08:33] 2024-06-13 07:08:19,879 | INFO     | sizes: {0: 2392544, 1: 2393479, 4: 2393685, 11: 2393713, 37786: 2435412, 37787: 2444394, 37788: 2444578, 37791: 2444748}
[2024-06-13 09:08:33] 2024-06-13 07:08:19,880 | INFO     | --------------------------------------------------
[2024-06-13 09:08:33] 2024-06-13 07:08:19,880 | INFO     | 
[2024-06-13 09:08:33] 2024-06-13 07:08:19,880 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2024-06-13 09:08:33] 2024-06-13 07:08:19,896 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,897 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,897 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,897 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,898 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-13 09:08:33] 2024-06-13 07:08:19,899 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,899 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-13 09:08:33] 2024-06-13 07:08:19,899 | INFO     | job 6223236056 has completed (purged errors)
[2024-06-13 09:08:33] 2024-06-13 07:08:19,899 | INFO     | overall cleanup function is called
[2024-06-13 09:08:33] 2024-06-13 07:08:20,906 | INFO     | --- collectZombieJob: --- 10, [2583787]
[2024-06-13 09:08:33] 2024-06-13 07:08:20,906 | INFO     | zombie collector waiting for pid 2583787
[2024-06-13 09:08:33] 2024-06-13 07:08:20,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-13 09:08:33] 2024-06-13 07:08:21,912 | INFO     | collected zombie processes
[2024-06-13 09:08:33] 2024-06-13 07:08:21,912 | INFO     | will now attempt to kill all subprocesses of pid=2583787
[2024-06-13 09:08:33] 2024-06-13 07:08:22,034 | INFO     | process IDs to be killed: [2583787] (in reverse order)
[2024-06-13 09:08:33] 2024-06-13 07:08:22,108 | WARNING  | found no corresponding commands to process id(s)
[2024-06-13 09:08:33] 2024-06-13 07:08:22,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-13 09:08:33] 2024-06-13 07:08:22,116 | INFO     | did not find any defunct processes belonging to 2583787
[2024-06-13 09:08:33] 2024-06-13 07:08:22,120 | INFO     | did not find any defunct processes belonging to 2583787
[2024-06-13 09:08:33] 2024-06-13 07:08:22,120 | INFO     | ready for new job
[2024-06-13 09:08:33] 2024-06-13 07:08:22,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-13 09:08:33] 2024-06-13 07:08:22,122 | INFO     | *************************************
[2024-06-13 09:08:33] 2024-06-13 07:08:22,122 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-13 09:08:33] 2024-06-13 07:08:22,122 | INFO     | *************************************
[2024-06-13 09:08:33] 2024-06-13 07:08:22,122 | INFO     | 
[2024-06-13 09:08:33] 2024-06-13 07:08:22,124 | INFO     | architecture information:
[2024-06-13 09:08:33] 2024-06-13 07:08:22,124 | INFO     | executing command: cat /etc/os-release
[2024-06-13 09:08:33] 2024-06-13 07:08:22,135 | INFO     | cat /etc/os-release:
[2024-06-13 09:08:33] NAME="CentOS Linux"
[2024-06-13 09:08:33] VERSION="7 (Core)"
[2024-06-13 09:08:33] ID="centos"
[2024-06-13 09:08:33] ID_LIKE="rhel fedora"
[2024-06-13 09:08:33] VERSION_ID="7"
[2024-06-13 09:08:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-13 09:08:33] ANSI_COLOR="0;31"
[2024-06-13 09:08:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-13 09:08:33] HOME_URL="https://www.centos.org/"
[2024-06-13 09:08:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-13 09:08:33] 
[2024-06-13 09:08:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-13 09:08:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-13 09:08:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-13 09:08:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-13 09:08:33] 
[2024-06-13 09:08:33] 2024-06-13 07:08:22,135 | INFO     | *************************************
[2024-06-13 09:08:33] 2024-06-13 07:08:22,637 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2024-06-13 09:08:33] 2024-06-13 07:08:22,658 | INFO     | sufficient remaining disk space (1637823283200 B)
[2024-06-13 09:08:33] 2024-06-13 07:08:22,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-13 09:08:33] 2024-06-13 07:08:22,659 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-13 09:08:33] 2024-06-13 07:08:22,806 | INFO     | found 0 job(s) in 20 queues
[2024-06-13 09:08:33] 2024-06-13 07:08:22,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-13 09:08:33] 2024-06-13 07:08:22,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-13 09:08:33] 2024-06-13 07:08:22,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-13 09:08:33] 2024-06-13 07:08:22,886 | INFO     | all data control threads have been joined
[2024-06-13 09:08:33] 2024-06-13 07:08:23,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-13 09:08:33] 2024-06-13 07:08:23,384 | INFO     | aborting loop
[2024-06-13 09:08:33] 2024-06-13 07:08:23,665 | INFO     | [job] retrieve thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:23,722 | INFO     | all job control threads have been joined
[2024-06-13 09:08:33] 2024-06-13 07:08:23,734 | INFO     | [payload] validate_pre thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:23,761 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:23,869 | INFO     | all payload control threads have been joined
[2024-06-13 09:08:33] 2024-06-13 07:08:23,887 | INFO     | [data] control thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:24,040 | INFO     | [payload] validate_post thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:24,109 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-13 09:08:33] 2024-06-13 07:08:24,277 | INFO     | [job] create_data_payload thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:24,390 | INFO     | [job] job monitor thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:24,401 | INFO     | [data] copytool_in thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:24,556 | INFO     | [job] validate thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:24,727 | INFO     | [job] control thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:24,874 | INFO     | [payload] control thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:24,884 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-13 09:08:33] 2024-06-13 07:08:24,982 | INFO     | [payload] execute_payloads thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:25,196 | INFO     | [payload] failed_post thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:25,889 | INFO     | [job] queue monitor thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:26,114 | INFO     | [data] copytool_out thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:26,880 | INFO     | [data] queue_monitor thread has finished
[2024-06-13 09:08:33] 2024-06-13 07:08:27,280 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47951165912128)>', '<ExcThread(monitor, started 47951345567488)>']
[2024-06-13 09:08:33] 2024-06-13 07:08:27,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-13 09:08:33] 2024-06-13 07:08:27,830 | INFO     | [monitor] control thread has ended
[2024-06-13 09:08:33] 2024-06-13 07:08:32,305 | INFO     | all workflow threads have been joined
[2024-06-13 09:08:33] 2024-06-13 07:08:32,305 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-13 09:08:33] 2024-06-13 07:08:32,305 | INFO     | traces error code: 0
[2024-06-13 09:08:33] 2024-06-13 07:08:32,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-13 09:08:33] 2024-06-13 07:08:32,385 [wrapper] ==== pilot stdout END ====
[2024-06-13 09:08:33] 2024-06-13 07:08:32,387 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-13 09:08:33] 2024-06-13 07:08:32,389 [wrapper] pilotpid: 2576859
[2024-06-13 09:08:33] 2024-06-13 07:08:32,391 [wrapper] Pilot exit status: 0
[2024-06-13 09:08:33] 2024-06-13 07:08:32,396 [wrapper] pandaids: 6223236056
[2024-06-13 09:08:33] 2024-06-13 07:08:32,438 [wrapper] cleanup supervisor_pilot 3539121 2576861
[2024-06-13 09:08:33] 2024-06-13 07:08:32,439 [wrapper] Test setup, not cleaning
[2024-06-13 09:08:33] 2024-06-13 07:08:32,441 [wrapper] ==== wrapper stdout END ====
[2024-06-13 09:08:33] 2024-06-13 07:08:32,443 [wrapper] ==== wrapper stderr END ====
[2024-06-13 09:08:33] 2024-06-13 07:08:32,446 [wrapper] apfmon messages muted
[2024-06-13 09:08:33]  *** Error codes and diagnostics ***
[2024-06-13 09:08:33]     "exeErrorCode": 0,
[2024-06-13 09:08:33]     "exeErrorDiag": "",
[2024-06-13 09:08:33]     "pilotErrorCode": 0,
[2024-06-13 09:08:33]     "pilotErrorDiag": "",
[2024-06-13 09:08:33]  *** Listing of results directory ***
[2024-06-13 09:08:33] total 952384
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc    469443 Jun  6 12:05 pilot3.tar.gz
[2024-06-13 09:08:33] -rwx------ 1 boinc boinc     32308 Jun  6 12:13 runpilot2-wrapper.sh
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc      5654 Jun  6 12:13 queuedata.json
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc       100 Jun 12 22:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-13 09:08:33] -rwxr-xr-x 1 boinc boinc      7986 Jun 12 22:38 run_atlas
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc       105 Jun 12 22:38 job.xml
[2024-06-13 09:08:33] -rw-r--r-- 2 boinc boinc 614932095 Jun 12 22:38 EVNT.38776190._000498.pool.root.1
[2024-06-13 09:08:33] -rw-r--r-- 2 boinc boinc     17537 Jun 12 22:38 start_atlas.sh
[2024-06-13 09:08:33] drwxrwx--x 2 boinc boinc      4096 Jun 12 22:38 shared
[2024-06-13 09:08:33] -rw-r--r-- 2 boinc boinc    482052 Jun 12 22:38 input.tar.gz
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc      6457 Jun 12 22:38 init_data.xml
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc         0 Jun 12 22:38 boinc_lockfile
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc      2653 Jun 12 22:38 pandaJob.out
[2024-06-13 09:08:33] -rw------- 1 boinc boinc       424 Jun 12 22:38 setup.sh.local
[2024-06-13 09:08:33] -rw------- 1 boinc boinc   1026730 Jun 12 22:38 agis_schedconf.cvmfs.json
[2024-06-13 09:08:33] -rw------- 1 boinc boinc   1324173 Jun 12 22:38 cric_ddmendpoints.json
[2024-06-13 09:08:33] drwx------ 4 boinc boinc      4096 Jun 12 22:38 pilot3
[2024-06-13 09:08:33] -rw------- 1 boinc boinc 346608424 Jun 13 09:07 HITS.38921001._037946.pool.root.1
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc       533 Jun 13 09:07 boinc_task_state.xml
[2024-06-13 09:08:33] -rw------- 1 boinc boinc        95 Jun 13 09:08 pilot_heartbeat.json
[2024-06-13 09:08:33] -rw------- 1 boinc boinc      1046 Jun 13 09:08 memory_monitor_summary.json
[2024-06-13 09:08:33] -rw------- 1 boinc boinc         0 Jun 13 09:08 agis_ddmendpoints.agis.ALL.json
[2024-06-13 09:08:33] -rw------- 1 boinc boinc    593674 Jun 13 09:08 log.38921001._037946.job.log.tgz.1
[2024-06-13 09:08:33] -rw------- 1 boinc boinc      7766 Jun 13 09:08 heartbeat.json
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc      8192 Jun 13 09:08 boinc_mmap_file
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc        29 Jun 13 09:08 wrapper_checkpoint.txt
[2024-06-13 09:08:33] -rw------- 1 boinc boinc      4222 Jun 13 09:08 pilotlog.txt
[2024-06-13 09:08:33] -rw------- 1 boinc boinc   4488230 Jun 13 09:08 log.38921001._037946.job.log.1
[2024-06-13 09:08:33] -rw------- 1 boinc boinc       357 Jun 13 09:08 output.list
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc       620 Jun 13 09:08 runtime_log
[2024-06-13 09:08:33] -rw------- 1 boinc boinc   5099520 Jun 13 09:08 result.tar.gz
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc     11410 Jun 13 09:08 runtime_log.err
[2024-06-13 09:08:33] -rw------- 1 boinc boinc       661 Jun 13 09:08 fIDMDmNIPZ5n9Rq4apOajLDm4fhM0noT9bVo2ijZDmaVOKDm20THln.diag
[2024-06-13 09:08:33] -rw-r--r-- 1 boinc boinc     21341 Jun 13 09:08 stderr.txt
[2024-06-13 09:08:33] HITS file was successfully produced:
[2024-06-13 09:08:33] -rw------- 1 boinc boinc 346608424 Jun 13 09:07 shared/HITS.pool.root.1
[2024-06-13 09:08:33]  *** Contents of shared directory: ***
[2024-06-13 09:08:33] total 944488
[2024-06-13 09:08:33] -rw-r--r-- 2 boinc boinc 614932095 Jun 12 22:38 ATLAS.root_0
[2024-06-13 09:08:33] -rw-r--r-- 2 boinc boinc     17537 Jun 12 22:38 start_atlas.sh
[2024-06-13 09:08:33] -rw-r--r-- 2 boinc boinc    482052 Jun 12 22:38 input.tar.gz
[2024-06-13 09:08:33] -rw------- 1 boinc boinc 346608424 Jun 13 09:07 HITS.pool.root.1
[2024-06-13 09:08:33] -rw------- 1 boinc boinc   5099520 Jun 13 09:08 result.tar.gz
09:08:35 (2572663): run_atlas exited; CPU time 147344.573371
09:08:35 (2572663): called boinc_finish(0)

</stderr_txt>
]]>

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