Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:53:56 (3520663): wrapper (7.7.26015): starting
04:53:56 (3520663): wrapper: running run_atlas (--nthreads 4)
[2024-06-11 04:53:56] Arguments: --nthreads 4
[2024-06-11 04:53:56] Threads: 4
[2024-06-11 04:53:56] Checking for CVMFS
[2024-06-11 04:53:56] No cvmfs_config command found, will try listing directly
[2024-06-11 04:53:56] CVMFS is ok
[2024-06-11 04:53:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-06-11 04:53:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-06-11 04:53:56] Further information can be found at the LHC@home message board.
[2024-06-11 04:53:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-06-11 04:53:56] Checking for apptainer binary...
[2024-06-11 04:53:56] which: no apptainer in ((null))
[2024-06-11 04:53:56] apptainer is not installed, using version from CVMFS
[2024-06-11 04:53:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-06-11 04:53:57] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-06-11 04:53:57] apptainer works
[2024-06-11 04:53:57] Set ATHENA_PROC_NUMBER=4
[2024-06-11 04:53:57] Set ATHENA_CORE_NUMBER=4
[2024-06-11 04:53:57] Starting ATLAS job with PandaID=6222787063
[2024-06-11 04:53:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-06-11 12:04:59]  *** The last 200 lines of the pilot log: ***
[2024-06-11 12:04:59] 2024-06-11 10:04:44,055 | INFO     | chi2: 0.003216272563212745
[2024-06-11 12:04:59] 2024-06-11 10:04:44,055 | INFO     | current chi2=0.003216272563212745 (change=49.52945538573812 %)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,055 | INFO     | model: linear, x: [1718076307.0, 1718076368.0, 1718076429.0, 1718076490.0, 1718076551.0, 1718076612.0, 1718076673.0, 1718076734.0, 1718076795.0, 1718076856.0, 1718
[2024-06-11 12:04:59] 2024-06-11 10:04:44,055 | INFO     | sum of square deviations: 18821458012.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,058 | INFO     | sum of deviations: 24127198606.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,058 | INFO     | mean x: 1718088263.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,058 | INFO     | mean y: 2357853.3765903306
[2024-06-11 12:04:59] 2024-06-11 10:04:44,058 | INFO     | -- intersect: -2200056896.7245755
[2024-06-11 12:04:59] 2024-06-11 10:04:44,058 | INFO     | intersect: -2200056896.7245755
[2024-06-11 12:04:59] 2024-06-11 10:04:44,058 | INFO     | chi2: 0.002126005660187914
[2024-06-11 12:04:59] 2024-06-11 10:04:44,058 | INFO     | current chi2=0.002126005660187914 (change=33.89846107867673 %)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,058 | INFO     | model: linear, x: [1718076612.0, 1718076673.0, 1718076734.0, 1718076795.0, 1718076856.0, 1718076917.0, 1718076978.0, 1718077039.0, 1718077100.0, 1718077161.0, 1718
[2024-06-11 12:04:59] 2024-06-11 10:04:44,059 | INFO     | sum of square deviations: 18112179597.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,061 | INFO     | sum of deviations: 21653634789.5
[2024-06-11 12:04:59] 2024-06-11 10:04:44,061 | INFO     | mean x: 1718088415.5
[2024-06-11 12:04:59] 2024-06-11 10:04:44,061 | INFO     | mean y: 2358384.6417525774
[2024-06-11 12:04:59] 2024-06-11 10:04:44,061 | INFO     | -- intersect: -2051666029.4861753
[2024-06-11 12:04:59] 2024-06-11 10:04:44,061 | INFO     | intersect: -2051666029.4861753
[2024-06-11 12:04:59] 2024-06-11 10:04:44,061 | INFO     | chi2: 0.0014322252489786746
[2024-06-11 12:04:59] 2024-06-11 10:04:44,061 | INFO     | current chi2=0.0014322252489786746 (change=32.63304628962829 %)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,062 | INFO     | model: linear, x: [1718076917.0, 1718076978.0, 1718077039.0, 1718077100.0, 1718077161.0, 1718077222.0, 1718077283.0, 1718077344.0, 1718077405.0, 1718077466.0, 1718
[2024-06-11 12:04:59] 2024-06-11 10:04:44,062 | INFO     | sum of square deviations: 17420948032.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,064 | INFO     | sum of deviations: 19649847467.000004
[2024-06-11 12:04:59] 2024-06-11 10:04:44,064 | INFO     | mean x: 1718088568.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,064 | INFO     | mean y: 2358826.678851175
[2024-06-11 12:04:59] 2024-06-11 10:04:44,064 | INFO     | -- intersect: -1935548239.8013105
[2024-06-11 12:04:59] 2024-06-11 10:04:44,064 | INFO     | intersect: -1935548239.8013105
[2024-06-11 12:04:59] 2024-06-11 10:04:44,064 | INFO     | chi2: 0.0010529117847386238
[2024-06-11 12:04:59] 2024-06-11 10:04:44,065 | INFO     | current chi2=0.0010529117847386238 (change=26.484204527921896 %)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,065 | INFO     | model: linear, x: [1718077222.0, 1718077283.0, 1718077344.0, 1718077405.0, 1718077466.0, 1718077527.0, 1718077588.0, 1718077649.0, 1718077710.0, 1718077771.0, 1718
[2024-06-11 12:04:59] 2024-06-11 10:04:44,065 | INFO     | sum of square deviations: 16747530754.5
[2024-06-11 12:04:59] 2024-06-11 10:04:44,067 | INFO     | sum of deviations: 17871615665.999996
[2024-06-11 12:04:59] 2024-06-11 10:04:44,067 | INFO     | mean x: 1718088720.5
[2024-06-11 12:04:59] 2024-06-11 10:04:44,067 | INFO     | mean y: 2359229.1587301586
[2024-06-11 12:04:59] 2024-06-11 10:04:44,067 | INFO     | -- intersect: -1831046646.7860181
[2024-06-11 12:04:59] 2024-06-11 10:04:44,067 | INFO     | intersect: -1831046646.7860181
[2024-06-11 12:04:59] 2024-06-11 10:04:44,067 | INFO     | chi2: 0.0007560633148800509
[2024-06-11 12:04:59] 2024-06-11 10:04:44,067 | INFO     | current chi2=0.0007560633148800509 (change=28.19309976022948 %)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,068 | INFO     | model: linear, x: [1718077527.0, 1718077588.0, 1718077649.0, 1718077710.0, 1718077771.0, 1718077832.0, 1718077893.0, 1718077954.0, 1718078015.0, 1718078076.0, 1718
[2024-06-11 12:04:59] 2024-06-11 10:04:44,068 | INFO     | sum of square deviations: 16091695202.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,070 | INFO     | sum of deviations: 16457051408.000002
[2024-06-11 12:04:59] 2024-06-11 10:04:44,070 | INFO     | mean x: 1718088873.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,070 | INFO     | mean y: 2359558.0589812333
[2024-06-11 12:04:59] 2024-06-11 10:04:44,070 | INFO     | -- intersect: -1754737910.6377654
[2024-06-11 12:04:59] 2024-06-11 10:04:44,070 | INFO     | intersect: -1754737910.6377654
[2024-06-11 12:04:59] 2024-06-11 10:04:44,070 | INFO     | chi2: 0.0006089559855770291
[2024-06-11 12:04:59] 2024-06-11 10:04:44,070 | INFO     | current chi2=0.0006089559855770291 (change=19.45701192053742 %)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,070 | INFO     | left removable region: 100
[2024-06-11 12:04:59] 2024-06-11 10:04:44,071 | INFO     | model: linear, x: [1718080577.0, 1718080638.0, 1718080699.0, 1718080760.0, 1718080821.0, 1718080882.0, 1718080943.0, 1718081004.0, 1718081065.0, 1718081126.0, 1718
[2024-06-11 12:04:59] 2024-06-11 10:04:44,071 | INFO     | sum of square deviations: 9877610318.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,072 | INFO     | sum of deviations: 7473909588.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,072 | INFO     | mean x: 1718090215.0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,072 | INFO     | mean y: 2361632.643533123
[2024-06-11 12:04:59] 2024-06-11 10:04:44,072 | INFO     | -- intersect: -1297634066.4718244
[2024-06-11 12:04:59] 2024-06-11 10:04:44,072 | INFO     | intersect: -1297634066.4718244
[2024-06-11 12:04:59] 2024-06-11 10:04:44,073 | INFO     | chi2: 0.00016104794550211867
[2024-06-11 12:04:59] 2024-06-11 10:04:44,073 | INFO     | -- intersect: -1297634066.4718244
[2024-06-11 12:04:59] 2024-06-11 10:04:44,073 | INFO     | current memory leak: 0.76 B/s (using 317 data points, chi2=0.00)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | ..............................
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | . Timing measurements:
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | . get job = 0 s
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | . initial setup = 1 s
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | . payload setup = 6 s
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | . stage-in = 0 s
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | . payload execution = 25799 s
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | . stage-out = 1 s
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | . log creation = 0 s
[2024-06-11 12:04:59] 2024-06-11 10:04:44,074 | INFO     | ..............................
[2024-06-11 12:04:59] 2024-06-11 10:04:44,140 | INFO     | 
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | job summary report
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | --------------------------------------------------
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | PanDA job id: 6222787063
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | task id: 38920995
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | errors: (none)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | status: LOG_TRANSFER = DONE 
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | pilot state: finished 
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | transexitcode: 0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | exeerrorcode: 0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | exeerrordiag: 
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | exitcode: 0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,141 | INFO     | exitmsg: OK
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | cpuconsumptiontime: 100449 s
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | nevents: 400
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | neventsw: 0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | pid: 3532917
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | pgrp: 3532917
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | corecount: 4
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | event service: False
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | sizes: {0: 2393367, 5: 2393573, 11: 2393629, 25809: 2429534, 25810: 2429533, 25811: 2438573, 25814: 2438757, 25819: 2438927}
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | --------------------------------------------------
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | 
[2024-06-11 12:04:59] 2024-06-11 10:04:44,142 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2024-06-11 12:04:59] 2024-06-11 10:04:44,209 | WARNING  | process 3532917 is no longer using CPU - aborting
[2024-06-11 12:04:59] 2024-06-11 10:04:44,209 | INFO     | aborting job monitoring since job object (job id=6222787063) has expired
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue jobs had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue payloads had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue data_in had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue data_out had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,228 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue completed_jobids has 1 job(s)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | queue messages had 0 job(s) [purged]
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | job 6222787063 has completed (purged errors)
[2024-06-11 12:04:59] 2024-06-11 10:04:44,229 | INFO     | overall cleanup function is called
[2024-06-11 12:04:59] 2024-06-11 10:04:45,236 | INFO     | --- collectZombieJob: --- 10, [3532917]
[2024-06-11 12:04:59] 2024-06-11 10:04:45,236 | INFO     | zombie collector waiting for pid 3532917
[2024-06-11 12:04:59] 2024-06-11 10:04:45,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-06-11 12:04:59] 2024-06-11 10:04:46,241 | INFO     | collected zombie processes
[2024-06-11 12:04:59] 2024-06-11 10:04:46,241 | INFO     | will now attempt to kill all subprocesses of pid=3532917
[2024-06-11 12:04:59] 2024-06-11 10:04:46,445 | INFO     | process IDs to be killed: [3532917] (in reverse order)
[2024-06-11 12:04:59] 2024-06-11 10:04:46,603 | WARNING  | found no corresponding commands to process id(s)
[2024-06-11 12:04:59] 2024-06-11 10:04:46,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-06-11 12:04:59] 2024-06-11 10:04:46,619 | INFO     | did not find any defunct processes belonging to 3532917
[2024-06-11 12:04:59] 2024-06-11 10:04:46,635 | INFO     | did not find any defunct processes belonging to 3532917
[2024-06-11 12:04:59] 2024-06-11 10:04:46,635 | INFO     | ready for new job
[2024-06-11 12:04:59] 2024-06-11 10:04:46,635 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-06-11 12:04:59] 2024-06-11 10:04:46,638 | INFO     | *************************************
[2024-06-11 12:04:59] 2024-06-11 10:04:46,638 | INFO     | ***  PanDA Pilot version 3.7.6.8  ***
[2024-06-11 12:04:59] 2024-06-11 10:04:46,638 | INFO     | *************************************
[2024-06-11 12:04:59] 2024-06-11 10:04:46,638 | INFO     | 
[2024-06-11 12:04:59] 2024-06-11 10:04:46,645 | INFO     | architecture information:
[2024-06-11 12:04:59] 2024-06-11 10:04:46,645 | INFO     | executing command: cat /etc/os-release
[2024-06-11 12:04:59] 2024-06-11 10:04:46,660 | INFO     | cat /etc/os-release:
[2024-06-11 12:04:59] NAME="CentOS Linux"
[2024-06-11 12:04:59] VERSION="7 (Core)"
[2024-06-11 12:04:59] ID="centos"
[2024-06-11 12:04:59] ID_LIKE="rhel fedora"
[2024-06-11 12:04:59] VERSION_ID="7"
[2024-06-11 12:04:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-06-11 12:04:59] ANSI_COLOR="0;31"
[2024-06-11 12:04:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-06-11 12:04:59] HOME_URL="https://www.centos.org/"
[2024-06-11 12:04:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-06-11 12:04:59] 
[2024-06-11 12:04:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-06-11 12:04:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-06-11 12:04:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-06-11 12:04:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-06-11 12:04:59] 
[2024-06-11 12:04:59] 2024-06-11 10:04:46,660 | INFO     | *************************************
[2024-06-11 12:04:59] 2024-06-11 10:04:47,163 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2024-06-11 12:04:59] 2024-06-11 10:04:47,182 | INFO     | sufficient remaining disk space (3145901015040 B)
[2024-06-11 12:04:59] 2024-06-11 10:04:47,182 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-06-11 12:04:59] 2024-06-11 10:04:47,183 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-06-11 12:04:59] 2024-06-11 10:04:47,183 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-06-11 12:04:59] 2024-06-11 10:04:47,306 | INFO     | all data control threads have been joined
[2024-06-11 12:04:59] 2024-06-11 10:04:47,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-06-11 12:04:59] 2024-06-11 10:04:47,716 | INFO     | aborting loop
[2024-06-11 12:04:59] 2024-06-11 10:04:47,972 | INFO     | found 0 job(s) in 20 queues
[2024-06-11 12:04:59] 2024-06-11 10:04:47,972 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-06-11 12:04:59] 2024-06-11 10:04:47,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-06-11 12:04:59] 2024-06-11 10:04:48,187 | INFO     | [job] retrieve thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:48,187 | INFO     | all payload control threads have been joined
[2024-06-11 12:04:59] 2024-06-11 10:04:48,300 | INFO     | [data] copytool_in thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:48,312 | INFO     | [data] control thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:48,430 | INFO     | [payload] validate_post thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:48,495 | INFO     | [job] validate thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:48,666 | INFO     | [job] create_data_payload thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:48,721 | INFO     | [job] job monitor thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:48,731 | INFO     | all job control threads have been joined
[2024-06-11 12:04:59] 2024-06-11 10:04:48,753 | INFO     | [payload] run_realtimelog thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:48,962 | INFO     | [payload] execute_payloads thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:49,052 | INFO     | [payload] failed_post thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:49,128 | INFO     | [payload] validate_pre thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:49,151 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-06-11 12:04:59] 2024-06-11 10:04:49,188 | INFO     | [data] copytool_out thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:49,193 | INFO     | [payload] control thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:49,437 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-06-11 12:04:59] 2024-06-11 10:04:49,736 | INFO     | [job] control thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:50,157 | INFO     | [job] queue monitor thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:53,442 | INFO     | [data] queue_monitor thread has finished
[2024-06-11 12:04:59] 2024-06-11 10:04:53,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47754932536384)>', '<ExcThread(monitor, started 47755106150144)>']
[2024-06-11 12:04:59] 2024-06-11 10:04:54,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-06-11 12:04:59] 2024-06-11 10:04:54,002 | INFO     | [monitor] control thread has ended
[2024-06-11 12:04:59] 2024-06-11 10:04:58,550 | INFO     | all workflow threads have been joined
[2024-06-11 12:04:59] 2024-06-11 10:04:58,550 | INFO     | end of generic workflow (traces error code: 0)
[2024-06-11 12:04:59] 2024-06-11 10:04:58,551 | INFO     | traces error code: 0
[2024-06-11 12:04:59] 2024-06-11 10:04:58,551 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-06-11 12:04:59] 2024-06-11 10:04:58,633 [wrapper] ==== pilot stdout END ====
[2024-06-11 12:04:59] 2024-06-11 10:04:58,635 [wrapper] ==== wrapper stdout RESUME ====
[2024-06-11 12:04:59] 2024-06-11 10:04:58,636 [wrapper] pilotpid: 3525355
[2024-06-11 12:04:59] 2024-06-11 10:04:58,638 [wrapper] Pilot exit status: 0
[2024-06-11 12:04:59] 2024-06-11 10:04:58,645 [wrapper] pandaids: 6222787063
[2024-06-11 12:04:59] 2024-06-11 10:04:58,731 [wrapper] cleanup supervisor_pilot 1687381 3525356
[2024-06-11 12:04:59] 2024-06-11 10:04:58,735 [wrapper] Test setup, not cleaning
[2024-06-11 12:04:59] 2024-06-11 10:04:58,737 [wrapper] ==== wrapper stdout END ====
[2024-06-11 12:04:59] 2024-06-11 10:04:58,739 [wrapper] ==== wrapper stderr END ====
[2024-06-11 12:04:59] 2024-06-11 10:04:58,743 [wrapper] apfmon messages muted
[2024-06-11 12:04:59]  *** Error codes and diagnostics ***
[2024-06-11 12:04:59]     "exeErrorCode": 0,
[2024-06-11 12:04:59]     "exeErrorDiag": "",
[2024-06-11 12:04:59]     "pilotErrorCode": 0,
[2024-06-11 12:04:59]     "pilotErrorDiag": "",
[2024-06-11 12:04:59]  *** Listing of results directory ***
[2024-06-11 12:04:59] total 972736
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc    469443 Jun  6 01:42 pilot3.tar.gz
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc      5654 Jun  6 01:45 queuedata.json
[2024-06-11 12:04:59] -rwx------ 1 boinc boinc     32308 Jun  6 01:47 runpilot2-wrapper.sh
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc       100 Jun 11 04:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-06-11 12:04:59] -rwxr-xr-x 1 boinc boinc      7986 Jun 11 04:53 run_atlas
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc       105 Jun 11 04:53 job.xml
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc      6646 Jun 11 04:53 init_data.xml
[2024-06-11 12:04:59] -rw-r--r-- 2 boinc boinc 635731420 Jun 11 04:53 EVNT.38776180._000817.pool.root.1
[2024-06-11 12:04:59] -rw-r--r-- 2 boinc boinc     17537 Jun 11 04:53 start_atlas.sh
[2024-06-11 12:04:59] drwxrwx--x 2 boinc boinc      4096 Jun 11 04:53 shared
[2024-06-11 12:04:59] -rw-r--r-- 2 boinc boinc    482041 Jun 11 04:53 input.tar.gz
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc         0 Jun 11 04:53 boinc_lockfile
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc      2615 Jun 11 04:53 pandaJob.out
[2024-06-11 12:04:59] -rw------- 1 boinc boinc       424 Jun 11 04:53 setup.sh.local
[2024-06-11 12:04:59] -rw------- 1 boinc boinc   1021101 Jun 11 04:54 agis_schedconf.cvmfs.json
[2024-06-11 12:04:59] -rw------- 1 boinc boinc   1324173 Jun 11 04:54 cric_ddmendpoints.json
[2024-06-11 12:04:59] drwx------ 4 boinc boinc      4096 Jun 11 04:54 pilot3
[2024-06-11 12:04:59] -rw------- 1 boinc boinc 349233482 Jun 11 12:03 HITS.38920995._040374.pool.root.1
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc       531 Jun 11 12:03 boinc_task_state.xml
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc        28 Jun 11 12:04 wrapper_checkpoint.txt
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc      8192 Jun 11 12:04 boinc_mmap_file
[2024-06-11 12:04:59] -rw------- 1 boinc boinc        95 Jun 11 12:04 pilot_heartbeat.json
[2024-06-11 12:04:59] -rw------- 1 boinc boinc      1040 Jun 11 12:04 memory_monitor_summary.json
[2024-06-11 12:04:59] -rw------- 1 boinc boinc         0 Jun 11 12:04 agis_ddmendpoints.agis.ALL.json
[2024-06-11 12:04:59] -rw------- 1 boinc boinc    485220 Jun 11 12:04 log.38920995._040374.job.log.tgz.1
[2024-06-11 12:04:59] -rw------- 1 boinc boinc      7718 Jun 11 12:04 heartbeat.json
[2024-06-11 12:04:59] -rw------- 1 boinc boinc      4223 Jun 11 12:04 pilotlog.txt
[2024-06-11 12:04:59] -rw------- 1 boinc boinc   3302279 Jun 11 12:04 log.38920995._040374.job.log.1
[2024-06-11 12:04:59] -rw------- 1 boinc boinc       357 Jun 11 12:04 output.list
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc       620 Jun 11 12:04 runtime_log
[2024-06-11 12:04:59] -rw------- 1 boinc boinc   3809280 Jun 11 12:04 result.tar.gz
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc     11429 Jun 11 12:04 runtime_log.err
[2024-06-11 12:04:59] -rw------- 1 boinc boinc       659 Jun 11 12:04 PYmLDmYWFZ5n7Olcko1bjSoqABFKDmABFKDmOtvXDmillKDmXu5sXn.diag
[2024-06-11 12:04:59] -rw-r--r-- 1 boinc boinc     21441 Jun 11 12:04 stderr.txt
[2024-06-11 12:04:59] HITS file was successfully produced:
[2024-06-11 12:04:59] -rw------- 1 boinc boinc 349233482 Jun 11 12:03 shared/HITS.pool.root.1
[2024-06-11 12:04:59]  *** Contents of shared directory: ***
[2024-06-11 12:04:59] total 966104
[2024-06-11 12:04:59] -rw-r--r-- 2 boinc boinc 635731420 Jun 11 04:53 ATLAS.root_0
[2024-06-11 12:04:59] -rw-r--r-- 2 boinc boinc     17537 Jun 11 04:53 start_atlas.sh
[2024-06-11 12:04:59] -rw-r--r-- 2 boinc boinc    482041 Jun 11 04:53 input.tar.gz
[2024-06-11 12:04:59] -rw------- 1 boinc boinc 349233482 Jun 11 12:03 HITS.pool.root.1
[2024-06-11 12:04:59] -rw------- 1 boinc boinc   3809280 Jun 11 12:04 result.tar.gz
12:05:01 (3520663): run_atlas exited; CPU time 99810.400387
12:05:01 (3520663): called boinc_finish(0)

</stderr_txt>
]]>

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