Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:03:05 (3453015): wrapper (7.7.26015): starting
17:03:05 (3453015): wrapper: running run_atlas (--nthreads 4)
[2024-05-26 17:03:05] Arguments: --nthreads 4
[2024-05-26 17:03:05] Threads: 4
[2024-05-26 17:03:05] Checking for CVMFS
[2024-05-26 17:03:05] No cvmfs_config command found, will try listing directly
[2024-05-26 17:03:05] CVMFS is ok
[2024-05-26 17:03:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-26 17:03:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-26 17:03:05] Further information can be found at the LHC@home message board.
[2024-05-26 17:03:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-26 17:03:05] Checking for apptainer binary...
[2024-05-26 17:03:05] which: no apptainer in ((null))
[2024-05-26 17:03:05] apptainer is not installed, using version from CVMFS
[2024-05-26 17:03:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-26 17:03:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2024-05-26 17:03:06] apptainer works
[2024-05-26 17:03:06] Set ATHENA_PROC_NUMBER=4
[2024-05-26 17:03:06] Set ATHENA_CORE_NUMBER=4
[2024-05-26 17:03:06] Starting ATLAS job with PandaID=6211830999
[2024-05-26 17:03:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-26 22:32:18]  *** The last 200 lines of the pilot log: ***
[2024-05-26 22:32:18] 2024-05-26 20:31:56,351 | INFO     | chi2: 0.0893734569110891
[2024-05-26 22:32:18] 2024-05-26 20:31:56,351 | INFO     | current chi2=0.0893734569110891 (change=94.00953179534504 %)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,351 | INFO     | model: linear, x: [1716736732.0, 1716736793.0, 1716736854.0, 1716736915.0, 1716736976.0, 1716737037.0, 1716737098.0, 1716737159.0, 1716737220.0, 1716737281.0, 1716
[2024-05-26 22:32:18] 2024-05-26 20:31:56,351 | INFO     | sum of square deviations: 9059954057.0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,352 | INFO     | sum of deviations: 10368665472.500002
[2024-05-26 22:32:18] 2024-05-26 20:31:56,352 | INFO     | mean x: 1716746095.5
[2024-05-26 22:32:18] 2024-05-26 20:31:56,352 | INFO     | mean y: 2362105.2564935065
[2024-05-26 22:32:18] 2024-05-26 20:31:56,353 | INFO     | -- intersect: -1962368163.072729
[2024-05-26 22:32:18] 2024-05-26 20:31:56,353 | INFO     | intersect: -1962368163.072729
[2024-05-26 22:32:18] 2024-05-26 20:31:56,353 | INFO     | chi2: 0.0045953933350277995
[2024-05-26 22:32:18] 2024-05-26 20:31:56,353 | INFO     | current chi2=0.0045953933350277995 (change=94.85821238894295 %)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,353 | INFO     | model: linear, x: [1716737037.0, 1716737098.0, 1716737159.0, 1716737220.0, 1716737281.0, 1716737342.0, 1716737403.0, 1716737464.0, 1716737525.0, 1716737586.0, 1716
[2024-05-26 22:32:18] 2024-05-26 20:31:56,353 | INFO     | sum of square deviations: 8625843592.0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,355 | INFO     | sum of deviations: 7580775366.000002
[2024-05-26 22:32:18] 2024-05-26 20:31:56,355 | INFO     | mean x: 1716746248.0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,355 | INFO     | mean y: 2363082.5346534653
[2024-05-26 22:32:18] 2024-05-26 20:31:56,355 | INFO     | -- intersect: -1506389948.7145283
[2024-05-26 22:32:18] 2024-05-26 20:31:56,355 | INFO     | intersect: -1506389948.7145283
[2024-05-26 22:32:18] 2024-05-26 20:31:56,355 | INFO     | chi2: 0.0021176866299223215
[2024-05-26 22:32:18] 2024-05-26 20:31:56,355 | INFO     | current chi2=0.0021176866299223215 (change=53.917184546956506 %)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,355 | INFO     | model: linear, x: [1716737342.0, 1716737403.0, 1716737464.0, 1716737525.0, 1716737586.0, 1716737647.0, 1716737708.0, 1716737769.0, 1716737830.0, 1716737891.0, 1716
[2024-05-26 22:32:18] 2024-05-26 20:31:56,355 | INFO     | sum of square deviations: 8205826414.5
[2024-05-26 22:32:18] 2024-05-26 20:31:56,357 | INFO     | sum of deviations: 5753575631.999998
[2024-05-26 22:32:18] 2024-05-26 20:31:56,357 | INFO     | mean x: 1716746400.5
[2024-05-26 22:32:18] 2024-05-26 20:31:56,357 | INFO     | mean y: 2363745.436241611
[2024-05-26 22:32:18] 2024-05-26 20:31:56,357 | INFO     | -- intersect: -1201345638.2751567
[2024-05-26 22:32:18] 2024-05-26 20:31:56,357 | INFO     | intersect: -1201345638.2751567
[2024-05-26 22:32:18] 2024-05-26 20:31:56,357 | INFO     | chi2: 0.001143387824104485
[2024-05-26 22:32:18] 2024-05-26 20:31:56,357 | INFO     | current chi2=0.001143387824104485 (change=46.00769500318253 %)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,357 | INFO     | model: linear, x: [1716737647.0, 1716737708.0, 1716737769.0, 1716737830.0, 1716737891.0, 1716737952.0, 1716738013.0, 1716738074.0, 1716738135.0, 1716738196.0, 1716
[2024-05-26 22:32:18] 2024-05-26 20:31:56,358 | INFO     | sum of square deviations: 7799669962.0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,359 | INFO     | sum of deviations: 4757962607.000001
[2024-05-26 22:32:18] 2024-05-26 20:31:56,359 | INFO     | mean x: 1716746553.0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,359 | INFO     | mean y: 2364118.0443686005
[2024-05-26 22:32:18] 2024-05-26 20:31:56,359 | INFO     | -- intersect: -1044887361.1420202
[2024-05-26 22:32:18] 2024-05-26 20:31:56,359 | INFO     | intersect: -1044887361.1420202
[2024-05-26 22:32:18] 2024-05-26 20:31:56,359 | INFO     | chi2: 0.0008415316309175821
[2024-05-26 22:32:18] 2024-05-26 20:31:56,359 | INFO     | current chi2=0.0008415316309175821 (change=26.40015809363024 %)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,360 | INFO     | model: linear, x: [1716737952.0, 1716738013.0, 1716738074.0, 1716738135.0, 1716738196.0, 1716738257.0, 1716738318.0, 1716738379.0, 1716738440.0, 1716738501.0, 1716
[2024-05-26 22:32:18] 2024-05-26 20:31:56,360 | INFO     | sum of square deviations: 7407141672.0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,361 | INFO     | sum of deviations: 4706143686.5
[2024-05-26 22:32:18] 2024-05-26 20:31:56,361 | INFO     | mean x: 1716746705.5
[2024-05-26 22:32:18] 2024-05-26 20:31:56,361 | INFO     | mean y: 2364137.628472222
[2024-05-26 22:32:18] 2024-05-26 20:31:56,361 | INFO     | -- intersect: -1088374642.21007
[2024-05-26 22:32:18] 2024-05-26 20:31:56,361 | INFO     | intersect: -1088374642.21007
[2024-05-26 22:32:18] 2024-05-26 20:31:56,361 | INFO     | chi2: 0.000808621938862286
[2024-05-26 22:32:18] 2024-05-26 20:31:56,361 | INFO     | current chi2=0.000808621938862286 (change=3.9106898476783725 %)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,361 | INFO     | left removable region: 70
[2024-05-26 22:32:18] 2024-05-26 20:31:56,362 | INFO     | model: linear, x: [1716740087.0, 1716740148.0, 1716740209.0, 1716740270.0, 1716740331.0, 1716740392.0, 1716740453.0, 1716740514.0, 1716740575.0, 1716740636.0, 1716
[2024-05-26 22:32:18] 2024-05-26 20:31:56,362 | INFO     | sum of square deviations: 4672638308.0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,363 | INFO     | sum of deviations: 4109592082.0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,363 | INFO     | mean x: 1716747590.0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,363 | INFO     | mean y: 2364085.7975708502
[2024-05-26 22:32:18] 2024-05-26 20:31:56,363 | INFO     | -- intersect: -1507517877.5843425
[2024-05-26 22:32:18] 2024-05-26 20:31:56,363 | INFO     | intersect: -1507517877.5843425
[2024-05-26 22:32:18] 2024-05-26 20:31:56,363 | INFO     | chi2: 0.0005515142376941704
[2024-05-26 22:32:18] 2024-05-26 20:31:56,363 | INFO     | -- intersect: -1507517877.5843425
[2024-05-26 22:32:18] 2024-05-26 20:31:56,363 | INFO     | current memory leak: 0.88 B/s (using 247 data points, chi2=0.00)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | ..............................
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | . Timing measurements:
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | . get job = 0 s
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | . initial setup = 1 s
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | . payload setup = 4 s
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | . stage-in = 0 s
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | . payload execution = 19691 s
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | . stage-out = 1 s
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | . log creation = 0 s
[2024-05-26 22:32:18] 2024-05-26 20:31:56,364 | INFO     | ..............................
[2024-05-26 22:32:18] 2024-05-26 20:31:56,417 | INFO     | 
[2024-05-26 22:32:18] 2024-05-26 20:31:56,417 | INFO     | job summary report
[2024-05-26 22:32:18] 2024-05-26 20:31:56,418 | INFO     | --------------------------------------------------
[2024-05-26 22:32:18] 2024-05-26 20:31:56,418 | INFO     | PanDA job id: 6211830999
[2024-05-26 22:32:18] 2024-05-26 20:31:56,418 | INFO     | task id: 38920995
[2024-05-26 22:32:18] 2024-05-26 20:31:56,418 | INFO     | errors: (none)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,418 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-26 22:32:18] 2024-05-26 20:31:56,418 | INFO     | pilot state: finished 
[2024-05-26 22:32:18] 2024-05-26 20:31:56,418 | INFO     | transexitcode: 0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,419 | INFO     | exeerrorcode: 0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,419 | INFO     | exeerrordiag: 
[2024-05-26 22:32:18] 2024-05-26 20:31:56,419 | INFO     | exitcode: 0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,419 | INFO     | exitmsg: OK
[2024-05-26 22:32:18] 2024-05-26 20:31:56,419 | INFO     | cpuconsumptiontime: 75821 s
[2024-05-26 22:32:18] 2024-05-26 20:31:56,419 | INFO     | nevents: 400
[2024-05-26 22:32:18] 2024-05-26 20:31:56,419 | INFO     | neventsw: 0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,419 | INFO     | pid: 3466563
[2024-05-26 22:32:18] 2024-05-26 20:31:56,419 | INFO     | pgrp: 3466563
[2024-05-26 22:32:18] 2024-05-26 20:31:56,420 | INFO     | corecount: 4
[2024-05-26 22:32:18] 2024-05-26 20:31:56,420 | INFO     | event service: False
[2024-05-26 22:32:18] 2024-05-26 20:31:56,420 | INFO     | sizes: {0: 2378663, 3: 2378869, 11: 2378897, 19699: 2412161, 19700: 2421143, 19703: 2421199, 19707: 2421497}
[2024-05-26 22:32:18] 2024-05-26 20:31:56,420 | INFO     | --------------------------------------------------
[2024-05-26 22:32:18] 2024-05-26 20:31:56,420 | INFO     | 
[2024-05-26 22:32:18] 2024-05-26 20:31:56,420 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2024-05-26 22:32:18] 2024-05-26 20:31:56,443 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,443 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,443 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,443 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,443 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,443 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,444 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-26 22:32:18] 2024-05-26 20:31:56,445 | INFO     | job 6211830999 has completed (purged errors)
[2024-05-26 22:32:18] 2024-05-26 20:31:56,445 | INFO     | overall cleanup function is called
[2024-05-26 22:32:18] 2024-05-26 20:31:57,452 | INFO     | --- collectZombieJob: --- 10, [3466563]
[2024-05-26 22:32:18] 2024-05-26 20:31:57,453 | INFO     | zombie collector waiting for pid 3466563
[2024-05-26 22:32:18] 2024-05-26 20:31:57,453 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-26 22:32:18] 2024-05-26 20:31:58,458 | INFO     | collected zombie processes
[2024-05-26 22:32:18] 2024-05-26 20:31:58,458 | INFO     | will now attempt to kill all subprocesses of pid=3466563
[2024-05-26 22:32:18] 2024-05-26 20:31:58,595 | INFO     | process IDs to be killed: [3466563] (in reverse order)
[2024-05-26 22:32:18] 2024-05-26 20:31:58,683 | WARNING  | found no corresponding commands to process id(s)
[2024-05-26 22:32:18] 2024-05-26 20:31:58,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-26 22:32:18] 2024-05-26 20:31:58,691 | INFO     | did not find any defunct processes belonging to 3466563
[2024-05-26 22:32:18] 2024-05-26 20:31:58,696 | INFO     | did not find any defunct processes belonging to 3466563
[2024-05-26 22:32:18] 2024-05-26 20:31:58,697 | INFO     | ready for new job
[2024-05-26 22:32:18] 2024-05-26 20:31:58,697 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-26 22:32:18] 2024-05-26 20:31:58,698 | INFO     | *************************************
[2024-05-26 22:32:18] 2024-05-26 20:31:58,698 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-26 22:32:18] 2024-05-26 20:31:58,699 | INFO     | *************************************
[2024-05-26 22:32:18] 2024-05-26 20:31:58,699 | INFO     | 
[2024-05-26 22:32:18] 2024-05-26 20:31:58,701 | INFO     | architecture information:
[2024-05-26 22:32:18] 2024-05-26 20:31:58,701 | INFO     | executing command: cat /etc/os-release
[2024-05-26 22:32:18] 2024-05-26 20:31:58,715 | INFO     | cat /etc/os-release:
[2024-05-26 22:32:18] NAME="CentOS Linux"
[2024-05-26 22:32:18] VERSION="7 (Core)"
[2024-05-26 22:32:18] ID="centos"
[2024-05-26 22:32:18] ID_LIKE="rhel fedora"
[2024-05-26 22:32:18] VERSION_ID="7"
[2024-05-26 22:32:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-26 22:32:18] ANSI_COLOR="0;31"
[2024-05-26 22:32:18] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-26 22:32:18] HOME_URL="https://www.centos.org/"
[2024-05-26 22:32:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-26 22:32:18] 
[2024-05-26 22:32:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-26 22:32:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-26 22:32:18] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-26 22:32:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-26 22:32:18] 
[2024-05-26 22:32:18] 2024-05-26 20:31:58,715 | INFO     | *************************************
[2024-05-26 22:32:18] 2024-05-26 20:31:59,218 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2024-05-26 22:32:18] 2024-05-26 20:31:59,243 | INFO     | sufficient remaining disk space (685533822976 B)
[2024-05-26 22:32:18] 2024-05-26 20:31:59,244 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-26 22:32:18] 2024-05-26 20:31:59,244 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-26 22:32:18] 2024-05-26 20:31:59,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-26 22:32:18] 2024-05-26 20:31:59,245 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-26 22:32:18] 2024-05-26 20:31:59,245 | INFO     | aborting loop
[2024-05-26 22:32:18] 2024-05-26 20:31:59,245 | INFO     | found 0 job(s) in 20 queues
[2024-05-26 22:32:18] 2024-05-26 20:31:59,245 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-26 22:32:18] 2024-05-26 20:31:59,246 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-26 22:32:18] 2024-05-26 20:31:59,367 | INFO     | all payload control threads have been joined
[2024-05-26 22:32:18] 2024-05-26 20:31:59,815 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-26 22:32:18] 2024-05-26 20:31:59,873 | INFO     | all data control threads have been joined
[2024-05-26 22:32:18] 2024-05-26 20:32:00,250 | INFO     | [job] retrieve thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:00,251 | INFO     | [job] job monitor thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:00,299 | INFO     | [payload] validate_post thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:00,373 | INFO     | [payload] control thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:00,624 | INFO     | [data] copytool_in thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:00,879 | INFO     | [data] control thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:00,921 | INFO     | all job control threads have been joined
[2024-05-26 22:32:18] 2024-05-26 20:32:00,981 | INFO     | [payload] execute_payloads thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:01,087 | INFO     | [job] validate thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:01,203 | INFO     | [payload] validate_pre thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:01,293 | INFO     | [payload] failed_post thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:01,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-26 22:32:18] 2024-05-26 20:32:01,471 | INFO     | [job] create_data_payload thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:01,821 | INFO     | [data] copytool_out thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:01,927 | INFO     | [job] control thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:02,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-26 22:32:18] 2024-05-26 20:32:02,428 | INFO     | [job] queue monitor thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:06,178 | INFO     | [data] queue_monitor thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:09,937 | INFO     | job.realtimelogging is not enabled
[2024-05-26 22:32:18] 2024-05-26 20:32:10,943 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-26 22:32:18] 2024-05-26 20:32:11,937 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47620260394048)>', '<ExcThread(monitor, started 47620433745664)>']
[2024-05-26 22:32:18] 2024-05-26 20:32:12,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-26 22:32:18] 2024-05-26 20:32:12,306 | INFO     | [monitor] control thread has ended
[2024-05-26 22:32:18] 2024-05-26 20:32:16,961 | INFO     | all workflow threads have been joined
[2024-05-26 22:32:18] 2024-05-26 20:32:16,962 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-26 22:32:18] 2024-05-26 20:32:16,962 | INFO     | traces error code: 0
[2024-05-26 22:32:18] 2024-05-26 20:32:16,962 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-26 22:32:18] 2024-05-26 20:32:17,051 [wrapper] ==== pilot stdout END ====
[2024-05-26 22:32:18] 2024-05-26 20:32:17,053 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-26 22:32:18] 2024-05-26 20:32:17,055 [wrapper] pilotpid: 3457365
[2024-05-26 22:32:18] 2024-05-26 20:32:17,057 [wrapper] Pilot exit status: 0
[2024-05-26 22:32:18] 2024-05-26 20:32:17,065 [wrapper] pandaids: 6211830999
[2024-05-26 22:32:18] 2024-05-26 20:32:17,143 [wrapper] cleanup supervisor_pilot 4035971 3457366
[2024-05-26 22:32:18] 2024-05-26 20:32:17,145 [wrapper] Test setup, not cleaning
[2024-05-26 22:32:18] 2024-05-26 20:32:17,147 [wrapper] ==== wrapper stdout END ====
[2024-05-26 22:32:18] 2024-05-26 20:32:17,149 [wrapper] ==== wrapper stderr END ====
[2024-05-26 22:32:18] 2024-05-26 20:32:17,154 [wrapper] apfmon messages muted
[2024-05-26 22:32:18]  *** Error codes and diagnostics ***
[2024-05-26 22:32:18]     "exeErrorCode": 0,
[2024-05-26 22:32:18]     "exeErrorDiag": "",
[2024-05-26 22:32:18]     "pilotErrorCode": 0,
[2024-05-26 22:32:18]     "pilotErrorDiag": "",
[2024-05-26 22:32:18]  *** Listing of results directory ***
[2024-05-26 22:32:18] total 969564
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc    467845 May 22 00:25 pilot3.tar.gz
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc      5633 May 22 00:40 queuedata.json
[2024-05-26 22:32:18] -rwx------ 1 boinc boinc     32308 May 22 00:40 runpilot2-wrapper.sh
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc       100 May 26 17:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-26 22:32:18] -rwxr-xr-x 1 boinc boinc      7986 May 26 17:02 run_atlas
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc       105 May 26 17:02 job.xml
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc      6663 May 26 17:03 init_data.xml
[2024-05-26 22:32:18] -rw-r--r-- 2 boinc boinc 633573770 May 26 17:03 EVNT.38776180._000174.pool.root.1
[2024-05-26 22:32:18] -rw-r--r-- 2 boinc boinc     17537 May 26 17:03 start_atlas.sh
[2024-05-26 22:32:18] drwxrwx--x 2 boinc boinc      4096 May 26 17:03 shared
[2024-05-26 22:32:18] -rw-r--r-- 2 boinc boinc    480000 May 26 17:03 input.tar.gz
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc         0 May 26 17:03 boinc_lockfile
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc      2614 May 26 17:03 pandaJob.out
[2024-05-26 22:32:18] -rw------- 1 boinc boinc       424 May 26 17:03 setup.sh.local
[2024-05-26 22:32:18] -rw------- 1 boinc boinc   1010157 May 26 17:03 agis_schedconf.cvmfs.json
[2024-05-26 22:32:18] -rw------- 1 boinc boinc   1317222 May 26 17:03 cric_ddmendpoints.json
[2024-05-26 22:32:18] drwx------ 4 boinc boinc      4096 May 26 17:03 pilot3
[2024-05-26 22:32:18] -rw------- 1 boinc boinc        95 May 26 22:31 pilot_heartbeat.json
[2024-05-26 22:32:18] -rw------- 1 boinc boinc 350286066 May 26 22:31 HITS.38920995._007103.pool.root.1
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc       532 May 26 22:31 boinc_task_state.xml
[2024-05-26 22:32:18] -rw------- 1 boinc boinc      1051 May 26 22:31 memory_monitor_summary.json
[2024-05-26 22:32:18] -rw------- 1 boinc boinc         0 May 26 22:31 agis_ddmendpoints.agis.ALL.json
[2024-05-26 22:32:18] -rw------- 1 boinc boinc    427180 May 26 22:31 log.38920995._007103.job.log.tgz.1
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc      8192 May 26 22:31 boinc_mmap_file
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc        28 May 26 22:31 wrapper_checkpoint.txt
[2024-05-26 22:32:18] -rw------- 1 boinc boinc      7769 May 26 22:31 heartbeat.json
[2024-05-26 22:32:18] -rw------- 1 boinc boinc      4416 May 26 22:32 pilotlog.txt
[2024-05-26 22:32:18] -rw------- 1 boinc boinc   2301696 May 26 22:32 log.38920995._007103.job.log.1
[2024-05-26 22:32:18] -rw------- 1 boinc boinc       357 May 26 22:32 output.list
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc       620 May 26 22:32 runtime_log
[2024-05-26 22:32:18] -rw------- 1 boinc boinc   2744320 May 26 22:32 result.tar.gz
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc     11410 May 26 22:32 runtime_log.err
[2024-05-26 22:32:18] -rw------- 1 boinc boinc       659 May 26 22:32 N76KDmBLnT5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmoTPKDmK8W1qn.diag
[2024-05-26 22:32:18] -rw-r--r-- 1 boinc boinc     21400 May 26 22:32 stderr.txt
[2024-05-26 22:32:18] HITS file was successfully produced:
[2024-05-26 22:32:18] -rw------- 1 boinc boinc 350286066 May 26 22:31 shared/HITS.pool.root.1
[2024-05-26 22:32:18]  *** Contents of shared directory: ***
[2024-05-26 22:32:18] total 963988
[2024-05-26 22:32:18] -rw-r--r-- 2 boinc boinc 633573770 May 26 17:03 ATLAS.root_0
[2024-05-26 22:32:18] -rw-r--r-- 2 boinc boinc     17537 May 26 17:03 start_atlas.sh
[2024-05-26 22:32:18] -rw-r--r-- 2 boinc boinc    480000 May 26 17:03 input.tar.gz
[2024-05-26 22:32:18] -rw------- 1 boinc boinc 350286066 May 26 22:31 HITS.pool.root.1
[2024-05-26 22:32:18] -rw------- 1 boinc boinc   2744320 May 26 22:32 result.tar.gz
22:32:19 (3453015): run_atlas exited; CPU time 75427.120510
22:32:19 (3453015): called boinc_finish(0)

</stderr_txt>
]]>

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