Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:51:51 (1237297): wrapper (7.7.26015): starting
23:51:51 (1237297): wrapper: running run_atlas (--nthreads 4)
[2024-05-26 23:51:51] Arguments: --nthreads 4
[2024-05-26 23:51:51] Threads: 4
[2024-05-26 23:51:51] Checking for CVMFS
[2024-05-26 23:51:51] No cvmfs_config command found, will try listing directly
[2024-05-26 23:51:51] CVMFS is ok
[2024-05-26 23:51:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-26 23:51:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-26 23:51:51] Further information can be found at the LHC@home message board.
[2024-05-26 23:51:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-26 23:51:51] Checking for apptainer binary...
[2024-05-26 23:51:51] which: no apptainer in ((null))
[2024-05-26 23:51:51] apptainer is not installed, using version from CVMFS
[2024-05-26 23:51:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-26 23:51:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-26 23:51:52] apptainer works
[2024-05-26 23:51:52] Set ATHENA_PROC_NUMBER=4
[2024-05-26 23:51:52] Set ATHENA_CORE_NUMBER=4
[2024-05-26 23:51:52] Starting ATLAS job with PandaID=6210824754
[2024-05-26 23:51:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-27 01:41:04]  *** The last 200 lines of the pilot log: ***
[2024-05-27 01:41:04] 2024-05-26 23:40:43,784 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-27 01:41:04] 2024-05-26 23:40:43,784 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-27 01:41:04] 2024-05-26 23:40:43,786 | INFO     | fitting pss+swap vs Time
[2024-05-27 01:41:04] 2024-05-26 23:40:43,786 | INFO     | model: linear, x: [1716760345.0, 1716760406.0, 1716760467.0, 1716760528.0, 1716760589.0, 1716760650.0, 1716760711.0, 1716760772.0, 1716760833.0, 1716760894.0, 1716
[2024-05-27 01:41:04] 2024-05-26 23:40:43,786 | INFO     | sum of square deviations: 379832238.0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,786 | INFO     | sum of deviations: 38762096322.00001
[2024-05-27 01:41:04] 2024-05-26 23:40:43,787 | INFO     | mean x: 1716763578.0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,787 | INFO     | mean y: 2179851.0654205605
[2024-05-27 01:41:04] 2024-05-26 23:40:43,787 | INFO     | -- intersect: -175194521521.44254
[2024-05-27 01:41:04] 2024-05-26 23:40:43,787 | INFO     | intersect: -175194521521.44254
[2024-05-27 01:41:04] 2024-05-26 23:40:43,787 | INFO     | chi2: 4.808953939100912
[2024-05-27 01:41:04] 2024-05-26 23:40:43,787 | INFO     | model: linear, x: [1716760345.0, 1716760406.0, 1716760467.0, 1716760528.0, 1716760589.0, 1716760650.0, 1716760711.0, 1716760772.0, 1716760833.0, 1716760894.0, 1716
[2024-05-27 01:41:04] 2024-05-26 23:40:43,787 | INFO     | sum of square deviations: 329031285.5
[2024-05-27 01:41:04] 2024-05-26 23:40:43,788 | INFO     | sum of deviations: 43444943071.49999
[2024-05-27 01:41:04] 2024-05-26 23:40:43,788 | INFO     | mean x: 1716763425.5
[2024-05-27 01:41:04] 2024-05-26 23:40:43,788 | INFO     | mean y: 2193113.3039215687
[2024-05-27 01:41:04] 2024-05-26 23:40:43,788 | INFO     | -- intersect: -226677434554.1411
[2024-05-27 01:41:04] 2024-05-26 23:40:43,788 | INFO     | intersect: -226677434554.1411
[2024-05-27 01:41:04] 2024-05-26 23:40:43,788 | INFO     | chi2: 3.9310456238247777
[2024-05-27 01:41:04] 2024-05-26 23:40:43,788 | INFO     | current chi2=3.9310456238247777 (change=18.25570230852054 %)
[2024-05-27 01:41:04] 2024-05-26 23:40:43,788 | INFO     | right removable region: 101
[2024-05-27 01:41:04] 2024-05-26 23:40:43,789 | INFO     | model: linear, x: [1716760650.0, 1716760711.0, 1716760772.0, 1716760833.0, 1716760894.0, 1716760955.0, 1716761016.0, 1716761077.0, 1716761138.0, 1716761199.0, 1716
[2024-05-27 01:41:04] 2024-05-26 23:40:43,789 | INFO     | sum of square deviations: 329031285.5
[2024-05-27 01:41:04] 2024-05-26 23:40:43,789 | INFO     | sum of deviations: 15455738817.499996
[2024-05-27 01:41:04] 2024-05-26 23:40:43,789 | INFO     | mean x: 1716763730.5
[2024-05-27 01:41:04] 2024-05-26 23:40:43,789 | INFO     | mean y: 2249458.088235294
[2024-05-27 01:41:04] 2024-05-26 23:40:43,789 | INFO     | -- intersect: -80640087606.13283
[2024-05-27 01:41:04] 2024-05-26 23:40:43,789 | INFO     | intersect: -80640087606.13283
[2024-05-27 01:41:04] 2024-05-26 23:40:43,789 | INFO     | chi2: 2.3884962233762703
[2024-05-27 01:41:04] 2024-05-26 23:40:43,789 | INFO     | current chi2=2.3884962233762703 (change=50.33231231524695 %)
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | model: linear, x: [1716760955.0, 1716761016.0, 1716761077.0, 1716761138.0, 1716761199.0, 1716761260.0, 1716761321.0, 1716761382.0, 1716761443.0, 1716761504.0, 1716
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | sum of square deviations: 282974608.0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | sum of deviations: -3279105386.0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | mean x: 1716763883.0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | mean y: 2311530.0515463916
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | -- intersect: 19896144885.006046
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | intersect: 19896144885.006046
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | chi2: 0.940752867504798
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | current chi2=0.940752867504798 (change=60.61317333066609 %)
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | model: linear, x: [1716761260.0, 1716761321.0, 1716761382.0, 1716761443.0, 1716761504.0, 1716761565.0, 1716761626.0, 1716761687.0, 1716761748.0, 1716761809.0, 1716
[2024-05-27 01:41:04] 2024-05-26 23:40:43,790 | INFO     | sum of square deviations: 241429643.0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | sum of deviations: -4901803870.5
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | mean x: 1716764035.5
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | mean y: 2317290.032608696
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | -- intersect: 34858188712.37116
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | intersect: 34858188712.37116
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | chi2: 0.9091603440149819
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | current chi2=0.9091603440149819 (change=3.3582170813478798 %)
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | left removable region: 30
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | model: linear, x: [1716762175.0, 1716762236.0, 1716762297.0, 1716762358.0, 1716762419.0, 1716762480.0, 1716762541.0, 1716762602.0, 1716762663.0, 1716762724.0, 1716
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | sum of square deviations: 110960220.0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | sum of deviations: 431590006.00000006
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | mean x: 1716764310.0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | mean y: 2343835.0140845072
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | -- intersect: -6675169230.961144
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | intersect: -6675169230.961144
[2024-05-27 01:41:04] 2024-05-26 23:40:43,791 | INFO     | chi2: 5.026930415768261e-05
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | -- intersect: -6675169230.961144
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | current memory leak: 3.89 B/s (using 71 data points, chi2=0.00)
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | ..............................
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | . Timing measurements:
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | . get job = 0 s
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | . initial setup = 1 s
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | . payload setup = 5 s
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | . stage-in = 0 s
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | . payload execution = 6491 s
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | . stage-out = 0 s
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | . log creation = 0 s
[2024-05-27 01:41:04] 2024-05-26 23:40:43,792 | INFO     | ..............................
[2024-05-27 01:41:04] 2024-05-26 23:40:43,842 | INFO     | 
[2024-05-27 01:41:04] 2024-05-26 23:40:43,842 | INFO     | job summary report
[2024-05-27 01:41:04] 2024-05-26 23:40:43,842 | INFO     | --------------------------------------------------
[2024-05-27 01:41:04] 2024-05-26 23:40:43,842 | INFO     | PanDA job id: 6210824754
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | task id: 38776104
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | errors: (none)
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | pilot state: finished 
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | transexitcode: 0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | exeerrorcode: 0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | exeerrordiag: 
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | exitcode: 0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | exitmsg: OK
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | cpuconsumptiontime: 23241 s
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | nevents: 400
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | neventsw: 0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | pid: 1249811
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | pgrp: 1249811
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | corecount: 4
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | event service: False
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | sizes: {0: 2378575, 1: 2378774, 4: 2378980, 11: 2379008, 6500: 2406079, 6501: 2415061, 6503: 2415245, 6508: 2415415}
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | --------------------------------------------------
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | 
[2024-05-27 01:41:04] 2024-05-26 23:40:43,843 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2024-05-27 01:41:04] 2024-05-26 23:40:43,862 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,862 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,862 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,862 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,862 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,862 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,862 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | job 6210824754 has completed (purged errors)
[2024-05-27 01:41:04] 2024-05-26 23:40:43,863 | INFO     | overall cleanup function is called
[2024-05-27 01:41:04] 2024-05-26 23:40:44,870 | INFO     | --- collectZombieJob: --- 10, [1249811]
[2024-05-27 01:41:04] 2024-05-26 23:40:44,870 | INFO     | zombie collector waiting for pid 1249811
[2024-05-27 01:41:04] 2024-05-26 23:40:44,871 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-27 01:41:04] 2024-05-26 23:40:45,876 | INFO     | collected zombie processes
[2024-05-27 01:41:04] 2024-05-26 23:40:45,876 | INFO     | will now attempt to kill all subprocesses of pid=1249811
[2024-05-27 01:41:04] 2024-05-26 23:40:46,093 | INFO     | process IDs to be killed: [1249811] (in reverse order)
[2024-05-27 01:41:04] 2024-05-26 23:40:46,258 | WARNING  | found no corresponding commands to process id(s)
[2024-05-27 01:41:04] 2024-05-26 23:40:46,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-27 01:41:04] 2024-05-26 23:40:46,269 | INFO     | did not find any defunct processes belonging to 1249811
[2024-05-27 01:41:04] 2024-05-26 23:40:46,276 | INFO     | did not find any defunct processes belonging to 1249811
[2024-05-27 01:41:04] 2024-05-26 23:40:46,276 | INFO     | ready for new job
[2024-05-27 01:41:04] 2024-05-26 23:40:46,276 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-27 01:41:04] 2024-05-26 23:40:46,277 | INFO     | *************************************
[2024-05-27 01:41:04] 2024-05-26 23:40:46,277 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-27 01:41:04] 2024-05-26 23:40:46,277 | INFO     | *************************************
[2024-05-27 01:41:04] 2024-05-26 23:40:46,277 | INFO     | 
[2024-05-27 01:41:04] 2024-05-26 23:40:46,282 | INFO     | architecture information:
[2024-05-27 01:41:04] 2024-05-26 23:40:46,282 | INFO     | executing command: cat /etc/os-release
[2024-05-27 01:41:04] 2024-05-26 23:40:46,296 | INFO     | cat /etc/os-release:
[2024-05-27 01:41:04] NAME="CentOS Linux"
[2024-05-27 01:41:04] VERSION="7 (Core)"
[2024-05-27 01:41:04] ID="centos"
[2024-05-27 01:41:04] ID_LIKE="rhel fedora"
[2024-05-27 01:41:04] VERSION_ID="7"
[2024-05-27 01:41:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-27 01:41:04] ANSI_COLOR="0;31"
[2024-05-27 01:41:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-27 01:41:04] HOME_URL="https://www.centos.org/"
[2024-05-27 01:41:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-27 01:41:04] 
[2024-05-27 01:41:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-27 01:41:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-27 01:41:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-27 01:41:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-27 01:41:04] 
[2024-05-27 01:41:04] 2024-05-26 23:40:46,297 | INFO     | *************************************
[2024-05-27 01:41:04] 2024-05-26 23:40:46,800 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2024-05-27 01:41:04] 2024-05-26 23:40:46,818 | INFO     | sufficient remaining disk space (3244413681664 B)
[2024-05-27 01:41:04] 2024-05-26 23:40:46,818 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-27 01:41:04] 2024-05-26 23:40:46,818 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-27 01:41:04] 2024-05-26 23:40:46,819 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-27 01:41:04] 2024-05-26 23:40:46,819 | INFO     | aborting loop
[2024-05-27 01:41:04] 2024-05-26 23:40:47,101 | INFO     | all data control threads have been joined
[2024-05-27 01:41:04] 2024-05-26 23:40:47,247 | INFO     | all payload control threads have been joined
[2024-05-27 01:41:04] 2024-05-26 23:40:47,290 | INFO     | found 0 job(s) in 20 queues
[2024-05-27 01:41:04] 2024-05-26 23:40:47,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-27 01:41:04] 2024-05-26 23:40:47,291 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-27 01:41:04] 2024-05-26 23:40:47,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-27 01:41:04] 2024-05-26 23:40:47,824 | INFO     | [job] retrieve thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:47,824 | INFO     | [job] job monitor thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:47,857 | INFO     | [job] validate thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:47,859 | INFO     | [payload] execute_payloads thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:48,046 | INFO     | [payload] failed_post thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:48,107 | INFO     | [data] control thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:48,121 | INFO     | [payload] validate_pre thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:48,122 | INFO     | [job] create_data_payload thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:48,253 | INFO     | [payload] control thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:48,356 | INFO     | all job control threads have been joined
[2024-05-27 01:41:04] 2024-05-26 23:40:48,621 | INFO     | [payload] validate_post thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:48,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-27 01:41:04] 2024-05-26 23:40:49,148 | INFO     | [data] copytool_in thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:49,362 | INFO     | [job] control thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:49,720 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-27 01:41:04] 2024-05-26 23:40:49,777 | INFO     | [data] copytool_out thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:49,859 | INFO     | [job] queue monitor thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:53,725 | INFO     | [data] queue_monitor thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:57,355 | INFO     | job.realtimelogging is not enabled
[2024-05-27 01:41:04] 2024-05-26 23:40:58,360 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-27 01:41:04] 2024-05-26 23:40:58,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47569856300096)>', '<ExcThread(monitor, started 47570027550464)>']
[2024-05-27 01:41:04] 2024-05-26 23:40:59,329 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-27 01:41:04] 2024-05-26 23:40:59,330 | INFO     | [monitor] control thread has ended
[2024-05-27 01:41:04] 2024-05-26 23:41:03,999 | INFO     | all workflow threads have been joined
[2024-05-27 01:41:04] 2024-05-26 23:41:03,999 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-27 01:41:04] 2024-05-26 23:41:03,999 | INFO     | traces error code: 0
[2024-05-27 01:41:04] 2024-05-26 23:41:03,999 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-27 01:41:04] 2024-05-26 23:41:04,057 [wrapper] ==== pilot stdout END ====
[2024-05-27 01:41:04] 2024-05-26 23:41:04,059 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-27 01:41:04] 2024-05-26 23:41:04,061 [wrapper] pilotpid: 1242168
[2024-05-27 01:41:04] 2024-05-26 23:41:04,062 [wrapper] Pilot exit status: 0
[2024-05-27 01:41:04] 2024-05-26 23:41:04,069 [wrapper] pandaids: 6210824754
[2024-05-27 01:41:04] 2024-05-26 23:41:04,134 [wrapper] cleanup supervisor_pilot 1895759 1242169
[2024-05-27 01:41:04] 2024-05-26 23:41:04,137 [wrapper] Test setup, not cleaning
[2024-05-27 01:41:04] 2024-05-26 23:41:04,139 [wrapper] ==== wrapper stdout END ====
[2024-05-27 01:41:04] 2024-05-26 23:41:04,141 [wrapper] ==== wrapper stderr END ====
[2024-05-27 01:41:04] 2024-05-26 23:41:04,145 [wrapper] apfmon messages muted
[2024-05-27 01:41:04]  *** Error codes and diagnostics ***
[2024-05-27 01:41:04]     "exeErrorCode": 0,
[2024-05-27 01:41:04]     "exeErrorDiag": "",
[2024-05-27 01:41:04]     "pilotErrorCode": 0,
[2024-05-27 01:41:04]     "pilotErrorDiag": "",
[2024-05-27 01:41:04]  *** Listing of results directory ***
[2024-05-27 01:41:04] total 820516
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc      5633 May 20 22:53 queuedata.json
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc    467845 May 20 22:53 pilot3.tar.gz
[2024-05-27 01:41:04] -rwx------ 1 boinc boinc     32308 May 20 22:54 runpilot2-wrapper.sh
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc       100 May 26 23:51 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-27 01:41:04] -rwxr-xr-x 1 boinc boinc      7986 May 26 23:51 run_atlas
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc       105 May 26 23:51 job.xml
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc      6643 May 26 23:51 init_data.xml
[2024-05-27 01:41:04] -rw-r--r-- 2 boinc boinc 604510766 May 26 23:51 EVNT.38776100._000931.pool.root.1
[2024-05-27 01:41:04] -rw-r--r-- 2 boinc boinc     17537 May 26 23:51 start_atlas.sh
[2024-05-27 01:41:04] drwxrwx--x 2 boinc boinc      4096 May 26 23:51 shared
[2024-05-27 01:41:04] -rw-r--r-- 2 boinc boinc    480002 May 26 23:51 input.tar.gz
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc         0 May 26 23:51 boinc_lockfile
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc      2645 May 26 23:51 pandaJob.out
[2024-05-27 01:41:04] -rw------- 1 boinc boinc       424 May 26 23:51 setup.sh.local
[2024-05-27 01:41:04] -rw------- 1 boinc boinc   1010165 May 26 23:51 agis_schedconf.cvmfs.json
[2024-05-27 01:41:04] -rw------- 1 boinc boinc         0 May 26 23:52 agis_ddmendpoints.agis.ALL.json
[2024-05-27 01:41:04] -rw------- 1 boinc boinc   1317222 May 26 23:52 cric_ddmendpoints.json
[2024-05-27 01:41:04] drwx------ 4 boinc boinc      4096 May 26 23:52 pilot3
[2024-05-27 01:41:04] -rw------- 1 boinc boinc 230277009 May 27 01:40 HITS.38776104._030004.pool.root.1
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc       530 May 27 01:40 boinc_task_state.xml
[2024-05-27 01:41:04] -rw------- 1 boinc boinc        95 May 27 01:40 pilot_heartbeat.json
[2024-05-27 01:41:04] -rw------- 1 boinc boinc      1041 May 27 01:40 memory_monitor_summary.json
[2024-05-27 01:41:04] -rw------- 1 boinc boinc    279894 May 27 01:40 log.38776104._030004.job.log.tgz.1
[2024-05-27 01:41:04] -rw------- 1 boinc boinc      7717 May 27 01:40 heartbeat.json
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc        27 May 27 01:40 wrapper_checkpoint.txt
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc      8192 May 27 01:40 boinc_mmap_file
[2024-05-27 01:41:04] -rw------- 1 boinc boinc      4294 May 27 01:41 pilotlog.txt
[2024-05-27 01:41:04] -rw------- 1 boinc boinc    670602 May 27 01:41 log.38776104._030004.job.log.1
[2024-05-27 01:41:04] -rw------- 1 boinc boinc       357 May 27 01:41 output.list
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc       620 May 27 01:41 runtime_log
[2024-05-27 01:41:04] -rw------- 1 boinc boinc    972800 May 27 01:41 result.tar.gz
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc     11409 May 27 01:41 runtime_log.err
[2024-05-27 01:41:04] -rw------- 1 boinc boinc       656 May 27 01:41 kvbKDm6CPT5n7Olcko1bjSoqABFKDmABFKDmOtvXDmXdbKDmkQWnbm.diag
[2024-05-27 01:41:04] -rw-r--r-- 1 boinc boinc     21271 May 27 01:41 stderr.txt
[2024-05-27 01:41:04] HITS file was successfully produced:
[2024-05-27 01:41:04] -rw------- 1 boinc boinc 230277009 May 27 01:40 shared/HITS.pool.root.1
[2024-05-27 01:41:04]  *** Contents of shared directory: ***
[2024-05-27 01:41:04] total 816676
[2024-05-27 01:41:04] -rw-r--r-- 2 boinc boinc 604510766 May 26 23:51 ATLAS.root_0
[2024-05-27 01:41:04] -rw-r--r-- 2 boinc boinc     17537 May 26 23:51 start_atlas.sh
[2024-05-27 01:41:04] -rw-r--r-- 2 boinc boinc    480002 May 26 23:51 input.tar.gz
[2024-05-27 01:41:04] -rw------- 1 boinc boinc 230277009 May 27 01:40 HITS.pool.root.1
[2024-05-27 01:41:04] -rw------- 1 boinc boinc    972800 May 27 01:41 result.tar.gz
01:41:06 (1237297): run_atlas exited; CPU time 23022.699517
01:41:06 (1237297): called boinc_finish(0)

</stderr_txt>
]]>

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