Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:58:33 (3149693): wrapper (7.7.26015): starting
08:58:33 (3149693): wrapper: running run_atlas (--nthreads 4)
[2024-05-26 08:58:33] Arguments: --nthreads 4
[2024-05-26 08:58:33] Threads: 4
[2024-05-26 08:58:33] Checking for CVMFS
[2024-05-26 08:58:33] No cvmfs_config command found, will try listing directly
[2024-05-26 08:58:33] CVMFS is ok
[2024-05-26 08:58:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-26 08:58:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-26 08:58:33] Further information can be found at the LHC@home message board.
[2024-05-26 08:58:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-26 08:58:33] Checking for apptainer binary...
[2024-05-26 08:58:33] which: no apptainer in ((null))
[2024-05-26 08:58:33] apptainer is not installed, using version from CVMFS
[2024-05-26 08:58:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-26 08:58:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2024-05-26 08:58:34] apptainer works
[2024-05-26 08:58:34] Set ATHENA_PROC_NUMBER=4
[2024-05-26 08:58:34] Set ATHENA_CORE_NUMBER=4
[2024-05-26 08:58:34] Starting ATLAS job with PandaID=6210448924
[2024-05-26 08:58:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-26 14:55:55]  *** The last 200 lines of the pilot log: ***
[2024-05-26 14:55:55] 2024-05-26 12:55:33,391 | INFO     | fitting pss+swap vs Time
[2024-05-26 14:55:55] 2024-05-26 12:55:33,392 | INFO     | model: linear, x: [1716706746.0, 1716706807.0, 1716706868.0, 1716706929.0, 1716706990.0, 1716707051.0, 1716707112.0, 1716707173.0, 1716707234.0, 1716707295.0, 1716
[2024-05-26 14:55:55] 2024-05-26 12:55:33,392 | INFO     | sum of square deviations: 13408995600.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,395 | INFO     | sum of deviations: 156710476931.99997
[2024-05-26 14:55:55] 2024-05-26 12:55:33,396 | INFO     | mean x: 1716717421.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,396 | INFO     | mean y: 2311084.3333333335
[2024-05-26 14:55:55] 2024-05-26 12:55:33,396 | INFO     | -- intersect: -20060907207.89901
[2024-05-26 14:55:55] 2024-05-26 12:55:33,396 | INFO     | intersect: -20060907207.89901
[2024-05-26 14:55:55] 2024-05-26 12:55:33,397 | INFO     | chi2: 4.784304905709482
[2024-05-26 14:55:55] 2024-05-26 12:55:33,397 | INFO     | model: linear, x: [1716706746.0, 1716706807.0, 1716706868.0, 1716706929.0, 1716706990.0, 1716707051.0, 1716707112.0, 1716707173.0, 1716707234.0, 1716707295.0, 1716
[2024-05-26 14:55:55] 2024-05-26 12:55:33,397 | INFO     | sum of square deviations: 12844082682.5
[2024-05-26 14:55:55] 2024-05-26 12:55:33,400 | INFO     | sum of deviations: 176888351867.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,401 | INFO     | mean x: 1716717268.5
[2024-05-26 14:55:55] 2024-05-26 12:55:33,401 | INFO     | mean y: 2316460.895953757
[2024-05-26 14:55:55] 2024-05-26 12:55:33,401 | INFO     | -- intersect: -23640266334.08467
[2024-05-26 14:55:55] 2024-05-26 12:55:33,401 | INFO     | intersect: -23640266334.08467
[2024-05-26 14:55:55] 2024-05-26 12:55:33,401 | INFO     | chi2: 3.9773038969606995
[2024-05-26 14:55:55] 2024-05-26 12:55:33,401 | INFO     | current chi2=3.9773038969606995 (change=16.86767513052368 %)
[2024-05-26 14:55:55] 2024-05-26 12:55:33,401 | INFO     | right removable region: 345
[2024-05-26 14:55:55] 2024-05-26 12:55:33,402 | INFO     | model: linear, x: [1716707051.0, 1716707112.0, 1716707173.0, 1716707234.0, 1716707295.0, 1716707356.0, 1716707417.0, 1716707478.0, 1716707539.0, 1716707600.0, 1716
[2024-05-26 14:55:55] 2024-05-26 12:55:33,402 | INFO     | sum of square deviations: 12844082682.5
[2024-05-26 14:55:55] 2024-05-26 12:55:33,405 | INFO     | sum of deviations: 74239624769.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,405 | INFO     | mean x: 1716717573.5
[2024-05-26 14:55:55] 2024-05-26 12:55:33,405 | INFO     | mean y: 2333312.167630058
[2024-05-26 14:55:55] 2024-05-26 12:55:33,405 | INFO     | -- intersect: -9920404779.875029
[2024-05-26 14:55:55] 2024-05-26 12:55:33,405 | INFO     | intersect: -9920404779.875029
[2024-05-26 14:55:55] 2024-05-26 12:55:33,406 | INFO     | chi2: 2.354174252772321
[2024-05-26 14:55:55] 2024-05-26 12:55:33,406 | INFO     | current chi2=2.354174252772321 (change=50.79380810443536 %)
[2024-05-26 14:55:55] 2024-05-26 12:55:33,406 | INFO     | model: linear, x: [1716707356.0, 1716707417.0, 1716707478.0, 1716707539.0, 1716707600.0, 1716707661.0, 1716707722.0, 1716707783.0, 1716707844.0, 1716707905.0, 1716
[2024-05-26 14:55:55] 2024-05-26 12:55:33,407 | INFO     | sum of square deviations: 12295263090.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,410 | INFO     | sum of deviations: 7426055576.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,410 | INFO     | mean x: 1716717726.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,410 | INFO     | mean y: 2351877.824046921
[2024-05-26 14:55:55] 2024-05-26 12:55:33,410 | INFO     | -- intersect: -1034506068.8716134
[2024-05-26 14:55:55] 2024-05-26 12:55:33,410 | INFO     | intersect: -1034506068.8716134
[2024-05-26 14:55:55] 2024-05-26 12:55:33,411 | INFO     | chi2: 0.8881556015152491
[2024-05-26 14:55:55] 2024-05-26 12:55:33,411 | INFO     | current chi2=0.8881556015152491 (change=62.273157967413 %)
[2024-05-26 14:55:55] 2024-05-26 12:55:33,411 | INFO     | model: linear, x: [1716707661.0, 1716707722.0, 1716707783.0, 1716707844.0, 1716707905.0, 1716707966.0, 1716708027.0, 1716708088.0, 1716708149.0, 1716708210.0, 1716
[2024-05-26 14:55:55] 2024-05-26 12:55:33,411 | INFO     | sum of square deviations: 11762304260.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,414 | INFO     | sum of deviations: -3378338325.4999924
[2024-05-26 14:55:55] 2024-05-26 12:55:33,415 | INFO     | mean x: 1716717878.5
[2024-05-26 14:55:55] 2024-05-26 12:55:33,415 | INFO     | mean y: 2354958.288690476
[2024-05-26 14:55:55] 2024-05-26 12:55:33,415 | INFO     | -- intersect: 495426186.06932515
[2024-05-26 14:55:55] 2024-05-26 12:55:33,415 | INFO     | intersect: 495426186.06932515
[2024-05-26 14:55:55] 2024-05-26 12:55:33,415 | INFO     | chi2: 0.8391016669650854
[2024-05-26 14:55:55] 2024-05-26 12:55:33,415 | INFO     | current chi2=0.8391016669650854 (change=5.523123928563264 %)
[2024-05-26 14:55:55] 2024-05-26 12:55:33,415 | INFO     | left removable region: 30
[2024-05-26 14:55:55] 2024-05-26 12:55:33,416 | INFO     | model: linear, x: [1716708576.0, 1716708637.0, 1716708698.0, 1716708759.0, 1716708820.0, 1716708881.0, 1716708942.0, 1716709003.0, 1716709064.0, 1716709125.0, 1716
[2024-05-26 14:55:55] 2024-05-26 12:55:33,416 | INFO     | sum of square deviations: 9691828230.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,419 | INFO     | sum of deviations: 13792343695.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,419 | INFO     | mean x: 1716718153.0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,419 | INFO     | mean y: 2362608.980952381
[2024-05-26 14:55:55] 2024-05-26 12:55:33,419 | INFO     | -- intersect: -2440681802.426409
[2024-05-26 14:55:55] 2024-05-26 12:55:33,419 | INFO     | intersect: -2440681802.426409
[2024-05-26 14:55:55] 2024-05-26 12:55:33,419 | INFO     | chi2: 0.001542755763408805
[2024-05-26 14:55:55] 2024-05-26 12:55:33,420 | INFO     | -- intersect: -2440681802.426409
[2024-05-26 14:55:55] 2024-05-26 12:55:33,420 | INFO     | current memory leak: 1.42 B/s (using 315 data points, chi2=0.00)
[2024-05-26 14:55:55] 2024-05-26 12:55:33,420 | INFO     | ..............................
[2024-05-26 14:55:55] 2024-05-26 12:55:33,421 | INFO     | . Timing measurements:
[2024-05-26 14:55:55] 2024-05-26 12:55:33,421 | INFO     | . get job = 0 s
[2024-05-26 14:55:55] 2024-05-26 12:55:33,421 | INFO     | . initial setup = 1 s
[2024-05-26 14:55:55] 2024-05-26 12:55:33,421 | INFO     | . payload setup = 4 s
[2024-05-26 14:55:55] 2024-05-26 12:55:33,421 | INFO     | . stage-in = 0 s
[2024-05-26 14:55:55] 2024-05-26 12:55:33,421 | INFO     | . payload execution = 21380 s
[2024-05-26 14:55:55] 2024-05-26 12:55:33,421 | INFO     | . stage-out = 1 s
[2024-05-26 14:55:55] 2024-05-26 12:55:33,421 | INFO     | . log creation = 0 s
[2024-05-26 14:55:55] 2024-05-26 12:55:33,421 | INFO     | ..............................
[2024-05-26 14:55:55] 2024-05-26 12:55:33,489 | INFO     | 
[2024-05-26 14:55:55] 2024-05-26 12:55:33,490 | INFO     | job summary report
[2024-05-26 14:55:55] 2024-05-26 12:55:33,490 | INFO     | --------------------------------------------------
[2024-05-26 14:55:55] 2024-05-26 12:55:33,490 | INFO     | PanDA job id: 6210448924
[2024-05-26 14:55:55] 2024-05-26 12:55:33,490 | INFO     | task id: 38920995
[2024-05-26 14:55:55] 2024-05-26 12:55:33,491 | INFO     | errors: (none)
[2024-05-26 14:55:55] 2024-05-26 12:55:33,491 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-26 14:55:55] 2024-05-26 12:55:33,491 | INFO     | pilot state: finished 
[2024-05-26 14:55:55] 2024-05-26 12:55:33,491 | INFO     | transexitcode: 0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,491 | INFO     | exeerrorcode: 0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,492 | INFO     | exeerrordiag: 
[2024-05-26 14:55:55] 2024-05-26 12:55:33,492 | INFO     | exitcode: 0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,492 | INFO     | exitmsg: OK
[2024-05-26 14:55:55] 2024-05-26 12:55:33,492 | INFO     | cpuconsumptiontime: 82441 s
[2024-05-26 14:55:55] 2024-05-26 12:55:33,492 | INFO     | nevents: 400
[2024-05-26 14:55:55] 2024-05-26 12:55:33,492 | INFO     | neventsw: 0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,493 | INFO     | pid: 3161322
[2024-05-26 14:55:55] 2024-05-26 12:55:33,493 | INFO     | pgrp: 3161322
[2024-05-26 14:55:55] 2024-05-26 12:55:33,493 | INFO     | corecount: 4
[2024-05-26 14:55:55] 2024-05-26 12:55:33,493 | INFO     | event service: False
[2024-05-26 14:55:55] 2024-05-26 12:55:33,493 | INFO     | sizes: {0: 2377192, 1: 2378739, 4: 2378945, 11: 2378973, 21388: 2413116, 21389: 2422098, 21391: 2422282, 21395: 2422452}
[2024-05-26 14:55:55] 2024-05-26 12:55:33,493 | INFO     | --------------------------------------------------
[2024-05-26 14:55:55] 2024-05-26 12:55:33,494 | INFO     | 
[2024-05-26 14:55:55] 2024-05-26 12:55:33,494 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-05-26 14:55:55] 2024-05-26 12:55:33,515 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,517 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,517 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,517 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,517 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-26 14:55:55] 2024-05-26 12:55:33,517 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,517 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-26 14:55:55] 2024-05-26 12:55:33,517 | INFO     | job 6210448924 has completed (purged errors)
[2024-05-26 14:55:55] 2024-05-26 12:55:33,517 | INFO     | overall cleanup function is called
[2024-05-26 14:55:55] 2024-05-26 12:55:34,524 | INFO     | --- collectZombieJob: --- 10, [3161322]
[2024-05-26 14:55:55] 2024-05-26 12:55:34,524 | INFO     | zombie collector waiting for pid 3161322
[2024-05-26 14:55:55] 2024-05-26 12:55:34,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-26 14:55:55] 2024-05-26 12:55:35,526 | INFO     | collected zombie processes
[2024-05-26 14:55:55] 2024-05-26 12:55:35,526 | INFO     | will now attempt to kill all subprocesses of pid=3161322
[2024-05-26 14:55:55] 2024-05-26 12:55:35,697 | INFO     | process IDs to be killed: [3161322] (in reverse order)
[2024-05-26 14:55:55] 2024-05-26 12:55:35,830 | WARNING  | found no corresponding commands to process id(s)
[2024-05-26 14:55:55] 2024-05-26 12:55:35,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-26 14:55:55] 2024-05-26 12:55:35,841 | INFO     | did not find any defunct processes belonging to 3161322
[2024-05-26 14:55:55] 2024-05-26 12:55:35,851 | INFO     | did not find any defunct processes belonging to 3161322
[2024-05-26 14:55:55] 2024-05-26 12:55:35,851 | INFO     | ready for new job
[2024-05-26 14:55:55] 2024-05-26 12:55:35,851 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-26 14:55:55] 2024-05-26 12:55:35,854 | INFO     | *************************************
[2024-05-26 14:55:55] 2024-05-26 12:55:35,854 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-26 14:55:55] 2024-05-26 12:55:35,854 | INFO     | *************************************
[2024-05-26 14:55:55] 2024-05-26 12:55:35,854 | INFO     | 
[2024-05-26 14:55:55] 2024-05-26 12:55:35,859 | INFO     | architecture information:
[2024-05-26 14:55:55] 2024-05-26 12:55:35,859 | INFO     | executing command: cat /etc/os-release
[2024-05-26 14:55:55] 2024-05-26 12:55:35,875 | INFO     | cat /etc/os-release:
[2024-05-26 14:55:55] NAME="CentOS Linux"
[2024-05-26 14:55:55] VERSION="7 (Core)"
[2024-05-26 14:55:55] ID="centos"
[2024-05-26 14:55:55] ID_LIKE="rhel fedora"
[2024-05-26 14:55:55] VERSION_ID="7"
[2024-05-26 14:55:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-26 14:55:55] ANSI_COLOR="0;31"
[2024-05-26 14:55:55] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-26 14:55:55] HOME_URL="https://www.centos.org/"
[2024-05-26 14:55:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-26 14:55:55] 
[2024-05-26 14:55:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-26 14:55:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-26 14:55:55] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-26 14:55:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-26 14:55:55] 
[2024-05-26 14:55:55] 2024-05-26 12:55:35,876 | INFO     | *************************************
[2024-05-26 14:55:55] 2024-05-26 12:55:36,379 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-05-26 14:55:55] 2024-05-26 12:55:36,403 | INFO     | sufficient remaining disk space (674602418176 B)
[2024-05-26 14:55:55] 2024-05-26 12:55:36,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-26 14:55:55] 2024-05-26 12:55:36,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-26 14:55:55] 2024-05-26 12:55:36,556 | INFO     | all data control threads have been joined
[2024-05-26 14:55:55] 2024-05-26 12:55:36,684 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-26 14:55:55] 2024-05-26 12:55:36,685 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-26 14:55:55] 2024-05-26 12:55:36,685 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-26 14:55:55] 2024-05-26 12:55:36,685 | INFO     | will abort loop
[2024-05-26 14:55:55] 2024-05-26 12:55:36,838 | INFO     | all payload control threads have been joined
[2024-05-26 14:55:55] 2024-05-26 12:55:37,106 | INFO     | found 0 job(s) in 20 queues
[2024-05-26 14:55:55] 2024-05-26 12:55:37,106 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-26 14:55:55] 2024-05-26 12:55:37,106 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-26 14:55:55] 2024-05-26 12:55:37,409 | INFO     | [job] retrieve thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:37,514 | INFO     | [data] copytool_in thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:37,561 | INFO     | [data] control thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:37,667 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-26 14:55:55] 2024-05-26 12:55:37,688 | INFO     | [job] job monitor thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:37,809 | INFO     | all job control threads have been joined
[2024-05-26 14:55:55] 2024-05-26 12:55:37,844 | INFO     | [payload] control thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:37,968 | INFO     | [payload] validate_post thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:38,227 | INFO     | [job] create_data_payload thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:38,260 | INFO     | [job] validate thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:38,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-26 14:55:55] 2024-05-26 12:55:38,516 | INFO     | [payload] validate_pre thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:38,655 | INFO     | [payload] failed_post thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:38,704 | INFO     | [payload] execute_payloads thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:38,815 | INFO     | [job] control thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:39,505 | INFO     | [job] queue monitor thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:39,671 | INFO     | [data] copytool_out thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:39,674 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-26 14:55:55] 2024-05-26 12:55:43,680 | INFO     | [data] queue_monitor thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:47,445 | INFO     | job.realtimelogging is not enabled
[2024-05-26 14:55:55] 2024-05-26 12:55:48,450 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-26 14:55:55] 2024-05-26 12:55:49,279 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47101302514752)>', '<ExcThread(monitor, started 47101477967616)>']
[2024-05-26 14:55:55] 2024-05-26 12:55:50,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-26 14:55:55] 2024-05-26 12:55:50,170 | INFO     | [monitor] control thread has ended
[2024-05-26 14:55:55] 2024-05-26 12:55:54,305 | INFO     | all workflow threads have been joined
[2024-05-26 14:55:55] 2024-05-26 12:55:54,305 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-26 14:55:55] 2024-05-26 12:55:54,305 | INFO     | traces error code: 0
[2024-05-26 14:55:55] 2024-05-26 12:55:54,306 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-26 14:55:55] 2024-05-26 12:55:54,400 [wrapper] ==== pilot stdout END ====
[2024-05-26 14:55:55] 2024-05-26 12:55:54,403 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-26 14:55:55] 2024-05-26 12:55:54,405 [wrapper] pilotpid: 3154296
[2024-05-26 14:55:55] 2024-05-26 12:55:54,408 [wrapper] Pilot exit status: 0
[2024-05-26 14:55:55] 2024-05-26 12:55:54,419 [wrapper] pandaids: 6210448924
[2024-05-26 14:55:55] 2024-05-26 12:55:54,495 [wrapper] cleanup supervisor_pilot 3926789 3154297
[2024-05-26 14:55:55] 2024-05-26 12:55:54,498 [wrapper] Test setup, not cleaning
[2024-05-26 14:55:55] 2024-05-26 12:55:54,501 [wrapper] ==== wrapper stdout END ====
[2024-05-26 14:55:55] 2024-05-26 12:55:54,503 [wrapper] ==== wrapper stderr END ====
[2024-05-26 14:55:55] 2024-05-26 12:55:54,508 [wrapper] apfmon messages muted
[2024-05-26 14:55:55]  *** Error codes and diagnostics ***
[2024-05-26 14:55:55]     "exeErrorCode": 0,
[2024-05-26 14:55:55]     "exeErrorDiag": "",
[2024-05-26 14:55:55]     "pilotErrorCode": 0,
[2024-05-26 14:55:55]     "pilotErrorDiag": "",
[2024-05-26 14:55:55]  *** Listing of results directory ***
[2024-05-26 14:55:55] total 970804
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc    467845 May 20 11:13 pilot3.tar.gz
[2024-05-26 14:55:55] -rwx------ 1 boinc boinc     32308 May 20 11:39 runpilot2-wrapper.sh
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc      5633 May 20 11:39 queuedata.json
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc       100 May 26 08:47 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-26 14:55:55] -rwxr-xr-x 1 boinc boinc      7986 May 26 08:47 run_atlas
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc       105 May 26 08:47 job.xml
[2024-05-26 14:55:55] -rw-r--r-- 2 boinc boinc 634014533 May 26 08:58 EVNT.38776180._000097.pool.root.1
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc      6663 May 26 08:58 init_data.xml
[2024-05-26 14:55:55] -rw-r--r-- 2 boinc boinc     17537 May 26 08:58 start_atlas.sh
[2024-05-26 14:55:55] drwxrwx--x 2 boinc boinc      4096 May 26 08:58 shared
[2024-05-26 14:55:55] -rw-r--r-- 2 boinc boinc    480000 May 26 08:58 input.tar.gz
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc         0 May 26 08:58 boinc_lockfile
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc      2613 May 26 08:58 pandaJob.out
[2024-05-26 14:55:55] -rw------- 1 boinc boinc       424 May 26 08:58 setup.sh.local
[2024-05-26 14:55:55] -rw------- 1 boinc boinc   1010165 May 26 08:58 agis_schedconf.cvmfs.json
[2024-05-26 14:55:55] -rw------- 1 boinc boinc   1317222 May 26 08:58 cric_ddmendpoints.json
[2024-05-26 14:55:55] drwx------ 4 boinc boinc      4096 May 26 08:58 pilot3
[2024-05-26 14:55:55] -rw------- 1 boinc boinc 350649352 May 26 14:54 HITS.38920995._005605.pool.root.1
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc       531 May 26 14:54 boinc_task_state.xml
[2024-05-26 14:55:55] -rw------- 1 boinc boinc      1049 May 26 14:55 memory_monitor_summary.json
[2024-05-26 14:55:55] -rw------- 1 boinc boinc         0 May 26 14:55 agis_ddmendpoints.agis.ALL.json
[2024-05-26 14:55:55] -rw------- 1 boinc boinc    421599 May 26 14:55 log.38920995._005605.job.log.tgz.1
[2024-05-26 14:55:55] -rw------- 1 boinc boinc      7762 May 26 14:55 heartbeat.json
[2024-05-26 14:55:55] -rw------- 1 boinc boinc        95 May 26 14:55 pilot_heartbeat.json
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc      8192 May 26 14:55 boinc_mmap_file
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc        28 May 26 14:55 wrapper_checkpoint.txt
[2024-05-26 14:55:55] -rw------- 1 boinc boinc      4479 May 26 14:55 pilotlog.txt
[2024-05-26 14:55:55] -rw------- 1 boinc boinc   2541418 May 26 14:55 log.38920995._005605.job.log.1
[2024-05-26 14:55:55] -rw------- 1 boinc boinc       357 May 26 14:55 output.list
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc       620 May 26 14:55 runtime_log
[2024-05-26 14:55:55] -rw------- 1 boinc boinc   2979840 May 26 14:55 result.tar.gz
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc     11410 May 26 14:55 runtime_log.err
[2024-05-26 14:55:55] -rw------- 1 boinc boinc       658 May 26 14:55 9rMKDmcfET5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmKdNKDmbpqacn.diag
[2024-05-26 14:55:55] -rw-r--r-- 1 boinc boinc     21303 May 26 14:55 stderr.txt
[2024-05-26 14:55:55] HITS file was successfully produced:
[2024-05-26 14:55:55] -rw------- 1 boinc boinc 350649352 May 26 14:54 shared/HITS.pool.root.1
[2024-05-26 14:55:55]  *** Contents of shared directory: ***
[2024-05-26 14:55:55] total 965000
[2024-05-26 14:55:55] -rw-r--r-- 2 boinc boinc 634014533 May 26 08:58 ATLAS.root_0
[2024-05-26 14:55:55] -rw-r--r-- 2 boinc boinc     17537 May 26 08:58 start_atlas.sh
[2024-05-26 14:55:55] -rw-r--r-- 2 boinc boinc    480000 May 26 08:58 input.tar.gz
[2024-05-26 14:55:55] -rw------- 1 boinc boinc 350649352 May 26 14:54 HITS.pool.root.1
[2024-05-26 14:55:55] -rw------- 1 boinc boinc   2979840 May 26 14:55 result.tar.gz
14:55:56 (3149693): run_atlas exited; CPU time 82021.460458
14:55:56 (3149693): called boinc_finish(0)

</stderr_txt>
]]>

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