Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:39:40 (4125211): wrapper (7.7.26015): starting
23:39:40 (4125211): wrapper: running run_atlas (--nthreads 4)
[2024-05-25 23:39:40] Arguments: --nthreads 4
[2024-05-25 23:39:40] Threads: 4
[2024-05-25 23:39:40] Checking for CVMFS
[2024-05-25 23:39:40] No cvmfs_config command found, will try listing directly
[2024-05-25 23:39:40] CVMFS is ok
[2024-05-25 23:39:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-25 23:39:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-25 23:39:40] Further information can be found at the LHC@home message board.
[2024-05-25 23:39:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-25 23:39:40] Checking for apptainer binary...
[2024-05-25 23:39:40] which: no apptainer in ((null))
[2024-05-25 23:39:40] apptainer is not installed, using version from CVMFS
[2024-05-25 23:39:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-25 23:39:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2024-05-25 23:39:41] apptainer works
[2024-05-25 23:39:41] Set ATHENA_PROC_NUMBER=4
[2024-05-25 23:39:41] Set ATHENA_CORE_NUMBER=4
[2024-05-25 23:39:41] Starting ATLAS job with PandaID=6210419337
[2024-05-25 23:39:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-26 01:44:38]  *** The last 200 lines of the pilot log: ***
[2024-05-26 01:44:38] 2024-05-25 23:43:08,296 | INFO     | model: linear, x: [1716674740.0, 1716674801.0, 1716674862.0, 1716674923.0, 1716674984.0, 1716675045.0, 1716675106.0, 1716675167.0, 1716675228.0, 1716675289.0, 1716
[2024-05-26 01:44:38] 2024-05-25 23:43:08,296 | INFO     | sum of square deviations: 274312120.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,297 | INFO     | sum of deviations: 288138105.5
[2024-05-26 01:44:38] 2024-05-25 23:43:08,297 | INFO     | mean x: 1716677637.5
[2024-05-26 01:44:38] 2024-05-25 23:43:08,297 | INFO     | mean y: 2344673.59375
[2024-05-26 01:44:38] 2024-05-25 23:43:08,297 | INFO     | -- intersect: -1800857613.725767
[2024-05-26 01:44:38] 2024-05-25 23:43:08,297 | INFO     | intersect: -1800857613.725767
[2024-05-26 01:44:38] 2024-05-25 23:43:08,297 | INFO     | chi2: 0.000989357777226564
[2024-05-26 01:44:38] 2024-05-25 23:43:08,298 | INFO     | current chi2=0.000989357777226564 (change=81.52021080426364 %)
[2024-05-26 01:44:38] 2024-05-25 23:43:08,298 | INFO     | model: linear, x: [1716675045.0, 1716675106.0, 1716675167.0, 1716675228.0, 1716675289.0, 1716675350.0, 1716675411.0, 1716675472.0, 1716675533.0, 1716675594.0, 1716
[2024-05-26 01:44:38] 2024-05-25 23:43:08,298 | INFO     | sum of square deviations: 233641590.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,298 | INFO     | sum of deviations: 302147213.00000006
[2024-05-26 01:44:38] 2024-05-25 23:43:08,299 | INFO     | mean x: 1716677790.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,299 | INFO     | mean y: 2344655.5274725277
[2024-05-26 01:44:38] 2024-05-25 23:43:08,299 | INFO     | -- intersect: -2217677087.4657135
[2024-05-26 01:44:38] 2024-05-25 23:43:08,299 | INFO     | intersect: -2217677087.4657135
[2024-05-26 01:44:38] 2024-05-25 23:43:08,299 | INFO     | chi2: 5.711530583306045e-05
[2024-05-26 01:44:38] 2024-05-25 23:43:08,299 | INFO     | current chi2=5.711530583306045e-05 (change=94.22703220738103 %)
[2024-05-26 01:44:38] 2024-05-25 23:43:08,299 | INFO     | model: linear, x: [1716675350.0, 1716675411.0, 1716675472.0, 1716675533.0, 1716675594.0, 1716675655.0, 1716675716.0, 1716675777.0, 1716675838.0, 1716675899.0, 1716
[2024-05-26 01:44:38] 2024-05-25 23:43:08,299 | INFO     | sum of square deviations: 197203697.5
[2024-05-26 01:44:38] 2024-05-25 23:43:08,300 | INFO     | sum of deviations: 179143397.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,300 | INFO     | mean x: 1716677942.5
[2024-05-26 01:44:38] 2024-05-25 23:43:08,300 | INFO     | mean y: 2345168.7674418604
[2024-05-26 01:44:38] 2024-05-25 23:43:08,300 | INFO     | -- intersect: -1557116048.608671
[2024-05-26 01:44:38] 2024-05-25 23:43:08,300 | INFO     | intersect: -1557116048.608671
[2024-05-26 01:44:38] 2024-05-25 23:43:08,301 | INFO     | chi2: 2.183668261755627e-05
[2024-05-26 01:44:38] 2024-05-25 23:43:08,301 | INFO     | current chi2=2.183668261755627e-05 (change=61.76737163698003 %)
[2024-05-26 01:44:38] 2024-05-25 23:43:08,301 | INFO     | model: linear, x: [1716675655.0, 1716675716.0, 1716675777.0, 1716675838.0, 1716675899.0, 1716675960.0, 1716676021.0, 1716676082.0, 1716676143.0, 1716676204.0, 1716
[2024-05-26 01:44:38] 2024-05-25 23:43:08,301 | INFO     | sum of square deviations: 164765880.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,301 | INFO     | sum of deviations: 114567271.99999999
[2024-05-26 01:44:38] 2024-05-25 23:43:08,302 | INFO     | mean x: 1716678095.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,302 | INFO     | mean y: 2345471.7901234566
[2024-05-26 01:44:38] 2024-05-25 23:43:08,302 | INFO     | -- intersect: -1191318691.2411232
[2024-05-26 01:44:38] 2024-05-25 23:43:08,302 | INFO     | intersect: -1191318691.2411232
[2024-05-26 01:44:38] 2024-05-25 23:43:08,302 | INFO     | chi2: 1.3357781474274609e-05
[2024-05-26 01:44:38] 2024-05-25 23:43:08,302 | INFO     | current chi2=1.3357781474274609e-05 (change=38.82870531105668 %)
[2024-05-26 01:44:38] 2024-05-25 23:43:08,302 | INFO     | model: linear, x: [1716675960.0, 1716676021.0, 1716676082.0, 1716676143.0, 1716676204.0, 1716676265.0, 1716676326.0, 1716676387.0, 1716676448.0, 1716676509.0, 1716
[2024-05-26 01:44:38] 2024-05-25 23:43:08,302 | INFO     | sum of square deviations: 136095575.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,303 | INFO     | sum of deviations: 64136406.5
[2024-05-26 01:44:38] 2024-05-25 23:43:08,303 | INFO     | mean x: 1716678247.5
[2024-05-26 01:44:38] 2024-05-25 23:43:08,303 | INFO     | mean y: 2345740.8815789474
[2024-05-26 01:44:38] 2024-05-25 23:43:08,303 | INFO     | -- intersect: -806656123.5167867
[2024-05-26 01:44:38] 2024-05-25 23:43:08,303 | INFO     | intersect: -806656123.5167867
[2024-05-26 01:44:38] 2024-05-25 23:43:08,304 | INFO     | chi2: 6.079442949546307e-06
[2024-05-26 01:44:38] 2024-05-25 23:43:08,304 | INFO     | current chi2=6.079442949546307e-06 (change=54.48762984141834 %)
[2024-05-26 01:44:38] 2024-05-25 23:43:08,304 | INFO     | left removable region not found
[2024-05-26 01:44:38] 2024-05-25 23:43:08,304 | INFO     | model: linear, x: [1716673215.0, 1716673276.0, 1716673337.0, 1716673398.0, 1716673459.0, 1716673520.0, 1716673581.0, 1716673642.0, 1716673703.0, 1716673764.0, 1716
[2024-05-26 01:44:38] 2024-05-25 23:43:08,304 | INFO     | sum of square deviations: 471562330.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,305 | INFO     | sum of deviations: 55601101365.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,305 | INFO     | mean x: 1716676692.0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,305 | INFO     | mean y: 2192663.3913043477
[2024-05-26 01:44:38] 2024-05-25 23:43:08,305 | INFO     | -- intersect: -202408196569.40616
[2024-05-26 01:44:38] 2024-05-25 23:43:08,305 | INFO     | intersect: -202408196569.40616
[2024-05-26 01:44:38] 2024-05-25 23:43:08,305 | INFO     | chi2: 4.711388530194879
[2024-05-26 01:44:38] 2024-05-25 23:43:08,306 | INFO     | -- intersect: -202408196569.40616
[2024-05-26 01:44:38] 2024-05-25 23:43:08,306 | INFO     | current memory leak: 117.91 B/s (using 115 data points, chi2=4.71)
[2024-05-26 01:44:38] 2024-05-25 23:43:08,306 | INFO     | ..............................
[2024-05-26 01:44:38] 2024-05-25 23:43:08,306 | INFO     | . Timing measurements:
[2024-05-26 01:44:38] 2024-05-25 23:43:08,306 | INFO     | . get job = 0 s
[2024-05-26 01:44:38] 2024-05-25 23:43:08,307 | INFO     | . initial setup = 1 s
[2024-05-26 01:44:38] 2024-05-25 23:43:08,307 | INFO     | . payload setup = 5 s
[2024-05-26 01:44:38] 2024-05-25 23:43:08,307 | INFO     | . stage-in = 0 s
[2024-05-26 01:44:38] 2024-05-25 23:43:08,307 | INFO     | . payload execution = 7366 s
[2024-05-26 01:44:38] 2024-05-25 23:43:08,307 | INFO     | . stage-out = 0 s
[2024-05-26 01:44:38] 2024-05-25 23:43:08,307 | INFO     | . log creation = 0 s
[2024-05-26 01:44:38] 2024-05-25 23:43:08,307 | INFO     | ..............................
[2024-05-26 01:44:38] 2024-05-25 23:43:08,410 | INFO     | 
[2024-05-26 01:44:38] 2024-05-25 23:43:08,410 | INFO     | job summary report
[2024-05-26 01:44:38] 2024-05-25 23:43:08,410 | INFO     | --------------------------------------------------
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | PanDA job id: 6210419337
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | task id: 38776104
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | errors: (none)
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | pilot state: finished 
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | transexitcode: 0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | exeerrorcode: 0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | exeerrordiag: 
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | exitcode: 0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | exitmsg: OK
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | cpuconsumptiontime: 26021 s
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | nevents: 400
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | neventsw: 0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | pid: 4138155
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | pgrp: 4138155
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | corecount: 4
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | event service: False
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | sizes: {0: 2378746, 5: 2378952, 11: 2379008, 7374: 2406515, 7376: 2415497, 7378: 2415553, 7382: 2415851}
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | --------------------------------------------------
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | 
[2024-05-26 01:44:38] 2024-05-25 23:43:08,411 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2024-05-26 01:44:38] 2024-05-25 23:43:08,469 | WARNING  | process 4138155 is no longer using CPU - aborting
[2024-05-26 01:44:38] 2024-05-25 23:43:08,470 | INFO     | aborting job monitoring since job object (job id=6210419337) has expired
[2024-05-26 01:44:38] 2024-05-25 23:43:08,486 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,487 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,487 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,487 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,488 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,488 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,488 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,488 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-26 01:44:38] 2024-05-25 23:43:08,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,489 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-26 01:44:38] 2024-05-25 23:43:08,489 | INFO     | job 6210419337 has completed (purged errors)
[2024-05-26 01:44:38] 2024-05-25 23:43:08,489 | INFO     | overall cleanup function is called
[2024-05-26 01:44:38] 2024-05-25 23:43:09,497 | INFO     | --- collectZombieJob: --- 10, [4138155]
[2024-05-26 01:44:38] 2024-05-25 23:43:09,497 | INFO     | zombie collector waiting for pid 4138155
[2024-05-26 01:44:38] 2024-05-25 23:43:09,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-26 01:44:38] 2024-05-25 23:43:10,501 | INFO     | collected zombie processes
[2024-05-26 01:44:38] 2024-05-25 23:43:10,502 | INFO     | will now attempt to kill all subprocesses of pid=4138155
[2024-05-26 01:44:38] 2024-05-25 23:43:10,683 | INFO     | process IDs to be killed: [4138155] (in reverse order)
[2024-05-26 01:44:38] 2024-05-25 23:43:10,825 | WARNING  | found no corresponding commands to process id(s)
[2024-05-26 01:44:38] 2024-05-25 23:43:10,825 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-26 01:44:38] 2024-05-25 23:43:10,837 | INFO     | did not find any defunct processes belonging to 4138155
[2024-05-26 01:44:38] 2024-05-25 23:43:10,845 | INFO     | did not find any defunct processes belonging to 4138155
[2024-05-26 01:44:38] 2024-05-25 23:43:10,845 | INFO     | ready for new job
[2024-05-26 01:44:38] 2024-05-25 23:43:10,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-26 01:44:38] 2024-05-25 23:43:10,846 | INFO     | *************************************
[2024-05-26 01:44:38] 2024-05-25 23:43:10,846 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-26 01:44:38] 2024-05-25 23:43:10,847 | INFO     | *************************************
[2024-05-26 01:44:38] 2024-05-25 23:43:10,847 | INFO     | 
[2024-05-26 01:44:38] 2024-05-25 23:43:10,851 | INFO     | architecture information:
[2024-05-26 01:44:38] 2024-05-25 23:43:10,851 | INFO     | executing command: cat /etc/os-release
[2024-05-26 01:44:38] 2024-05-25 23:43:10,865 | INFO     | cat /etc/os-release:
[2024-05-26 01:44:38] NAME="CentOS Linux"
[2024-05-26 01:44:38] VERSION="7 (Core)"
[2024-05-26 01:44:38] ID="centos"
[2024-05-26 01:44:38] ID_LIKE="rhel fedora"
[2024-05-26 01:44:38] VERSION_ID="7"
[2024-05-26 01:44:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-26 01:44:38] ANSI_COLOR="0;31"
[2024-05-26 01:44:38] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-26 01:44:38] HOME_URL="https://www.centos.org/"
[2024-05-26 01:44:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-26 01:44:38] 
[2024-05-26 01:44:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-26 01:44:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-26 01:44:38] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-26 01:44:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-26 01:44:38] 
[2024-05-26 01:44:38] 2024-05-25 23:43:10,865 | INFO     | *************************************
[2024-05-26 01:44:38] 2024-05-25 23:43:11,368 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2024-05-26 01:44:38] 2024-05-25 23:43:11,384 | INFO     | sufficient remaining disk space (3278170488832 B)
[2024-05-26 01:44:38] 2024-05-25 23:43:11,384 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-26 01:44:38] 2024-05-25 23:43:11,384 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-26 01:44:38] 2024-05-25 23:43:11,384 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-26 01:44:38] 2024-05-25 23:43:11,385 | INFO     | found 0 job(s) in 20 queues
[2024-05-26 01:44:38] 2024-05-25 23:43:11,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-26 01:44:38] 2024-05-25 23:43:11,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-26 01:44:38] 2024-05-25 23:43:11,422 | INFO     | all payload control threads have been joined
[2024-05-26 01:44:38] 2024-05-25 23:43:11,474 | INFO     | all data control threads have been joined
[2024-05-26 01:44:38] 2024-05-25 23:43:11,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-26 01:44:38] 2024-05-25 23:43:11,978 | INFO     | aborting loop
[2024-05-26 01:44:38] 2024-05-25 23:43:12,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-26 01:44:38] 2024-05-25 23:43:12,390 | INFO     | [job] retrieve thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:12,408 | INFO     | all job control threads have been joined
[2024-05-26 01:44:38] 2024-05-25 23:43:12,428 | INFO     | [payload] control thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:12,479 | INFO     | [data] control thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:12,773 | INFO     | [payload] validate_post thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:12,869 | INFO     | [payload] failed_post thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:12,983 | INFO     | [job] job monitor thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:13,414 | INFO     | [job] control thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:13,420 | INFO     | [job] validate thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:13,420 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-26 01:44:38] 2024-05-25 23:43:13,421 | INFO     | [data] copytool_in thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:13,503 | INFO     | [payload] execute_payloads thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:13,509 | INFO     | [job] create_data_payload thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:13,683 | INFO     | [payload] validate_pre thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:14,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-26 01:44:38] 2024-05-25 23:43:14,378 | INFO     | [data] copytool_out thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:14,426 | INFO     | [job] queue monitor thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:18,254 | INFO     | [data] queue_monitor thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:21,676 | INFO     | job.realtimelogging is not enabled
[2024-05-26 01:44:38] 2024-05-25 23:43:22,681 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-26 01:44:38] 2024-05-25 23:43:23,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47337147991104)>', '<ExcThread(monitor, started 47337657341696)>']
[2024-05-26 01:44:38] 2024-05-25 23:43:24,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-26 01:44:38] 2024-05-25 23:43:24,450 | INFO     | [monitor] control thread has ended
[2024-05-26 01:44:38] 2024-05-25 23:43:28,899 | INFO     | all workflow threads have been joined
[2024-05-26 01:44:38] 2024-05-25 23:43:28,899 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-26 01:44:38] 2024-05-25 23:43:28,900 | INFO     | traces error code: 0
[2024-05-26 01:44:38] 2024-05-25 23:43:28,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-26 01:44:38] 2024-05-25 23:43:28,967 [wrapper] ==== pilot stdout END ====
[2024-05-26 01:44:38] 2024-05-25 23:43:28,969 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-26 01:44:38] 2024-05-25 23:43:28,971 [wrapper] pilotpid: 4130186
[2024-05-26 01:44:38] 2024-05-25 23:43:28,973 [wrapper] Pilot exit status: 0
[2024-05-26 01:44:38] 2024-05-25 23:43:28,983 [wrapper] pandaids: 6210419337
[2024-05-26 01:44:38] 2024-05-25 23:43:29,070 [wrapper] cleanup supervisor_pilot  551342 4130187
[2024-05-26 01:44:38] 2024-05-25 23:43:29,073 [wrapper] Test setup, not cleaning
[2024-05-26 01:44:38] 2024-05-25 23:43:29,075 [wrapper] ==== wrapper stdout END ====
[2024-05-26 01:44:38] 2024-05-25 23:43:29,077 [wrapper] ==== wrapper stderr END ====
[2024-05-26 01:44:38] 2024-05-25 23:43:29,081 [wrapper] apfmon messages muted
[2024-05-26 01:44:38]  *** Error codes and diagnostics ***
[2024-05-26 01:44:38]     "exeErrorCode": 0,
[2024-05-26 01:44:38]     "exeErrorDiag": "",
[2024-05-26 01:44:38]     "pilotErrorCode": 0,
[2024-05-26 01:44:38]     "pilotErrorDiag": "",
[2024-05-26 01:44:38]  *** Listing of results directory ***
[2024-05-26 01:44:38] total 1008808
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc    467845 May 20 10:30 pilot3.tar.gz
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc      5633 May 20 10:48 queuedata.json
[2024-05-26 01:44:38] -rwx------ 1 boinc boinc     32308 May 20 10:48 runpilot2-wrapper.sh
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc       100 May 25 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-26 01:44:38] -rwxr-xr-x 1 boinc boinc      7986 May 25 10:14 run_atlas
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc       105 May 25 10:14 job.xml
[2024-05-26 01:44:38] -rw------- 2 boinc boinc 189530112 May 25 10:22 copy_JHqTDg
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc      6644 May 25 23:39 init_data.xml
[2024-05-26 01:44:38] -rw-r--r-- 2 boinc boinc 602766878 May 25 23:39 EVNT.38776100._000865.pool.root.1
[2024-05-26 01:44:38] drwxrwx--x 2 boinc boinc      4096 May 25 23:39 shared
[2024-05-26 01:44:38] -rw-r--r-- 2 boinc boinc    480003 May 25 23:39 input.tar.gz
[2024-05-26 01:44:38] -rw-r--r-- 2 boinc boinc     17537 May 25 23:39 start_atlas.sh
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc         0 May 25 23:39 boinc_lockfile
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc      2645 May 25 23:39 pandaJob.out
[2024-05-26 01:44:38] -rw------- 1 boinc boinc       424 May 25 23:39 setup.sh.local
[2024-05-26 01:44:38] -rw------- 1 boinc boinc   1010165 May 25 23:39 agis_schedconf.cvmfs.json
[2024-05-26 01:44:38] -rw------- 1 boinc boinc         0 May 25 23:39 agis_ddmendpoints.agis.ALL.json
[2024-05-26 01:44:38] -rw------- 1 boinc boinc   1317222 May 25 23:39 cric_ddmendpoints.json
[2024-05-26 01:44:38] drwx------ 4 boinc boinc      4096 May 25 23:39 pilot3
[2024-05-26 01:44:38] -rw------- 1 boinc boinc 235066296 May 26 01:42 HITS.38776104._027615.pool.root.1
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc       531 May 26 01:42 boinc_task_state.xml
[2024-05-26 01:44:38] -rw------- 1 boinc boinc      1039 May 26 01:42 memory_monitor_summary.json
[2024-05-26 01:44:38] -rw------- 1 boinc boinc    268780 May 26 01:43 log.38776104._027615.job.log.tgz.1
[2024-05-26 01:44:38] -rw------- 1 boinc boinc      7718 May 26 01:43 heartbeat.json
[2024-05-26 01:44:38] -rw------- 1 boinc boinc        95 May 26 01:43 pilot_heartbeat.json
[2024-05-26 01:44:38] -rw------- 1 boinc boinc      4417 May 26 01:43 pilotlog.txt
[2024-05-26 01:44:38] -rw------- 1 boinc boinc    802511 May 26 01:43 log.38776104._027615.job.log.1
[2024-05-26 01:44:38] -rw------- 1 boinc boinc       357 May 26 01:43 output.list
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc       620 May 26 01:43 runtime_log
[2024-05-26 01:44:38] -rw------- 1 boinc boinc   1085440 May 26 01:43 result.tar.gz
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc     11409 May 26 01:43 runtime_log.err
[2024-05-26 01:44:38] -rw------- 1 boinc boinc       655 May 26 01:43 R8sLDmTsDT5n7Olcko1bjSoqABFKDmABFKDmOtvXDmELbKDmQl0Eqm.diag
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc        27 May 26 01:44 wrapper_checkpoint.txt
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc      8192 May 26 01:44 boinc_mmap_file
[2024-05-26 01:44:38] -rw-r--r-- 1 boinc boinc     21418 May 26 01:44 stderr.txt
[2024-05-26 01:44:38] HITS file was successfully produced:
[2024-05-26 01:44:38] -rw------- 1 boinc boinc 235066296 May 26 01:42 shared/HITS.pool.root.1
[2024-05-26 01:44:38]  *** Contents of shared directory: ***
[2024-05-26 01:44:38] total 1004852
[2024-05-26 01:44:38] -rw------- 2 boinc boinc 189530112 May 25 10:22 copy_JHqTDg
[2024-05-26 01:44:38] -rw-r--r-- 2 boinc boinc 602766878 May 25 23:39 ATLAS.root_0
[2024-05-26 01:44:38] -rw-r--r-- 2 boinc boinc    480003 May 25 23:39 input.tar.gz
[2024-05-26 01:44:38] -rw-r--r-- 2 boinc boinc     17537 May 25 23:39 start_atlas.sh
[2024-05-26 01:44:38] -rw------- 1 boinc boinc 235066296 May 26 01:42 HITS.pool.root.1
[2024-05-26 01:44:38] -rw------- 1 boinc boinc   1085440 May 26 01:43 result.tar.gz
01:44:40 (4125211): run_atlas exited; CPU time 25858.124916
01:44:40 (4125211): called boinc_finish(0)

</stderr_txt>
]]>

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