Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:46:21 (3348783): wrapper (7.7.26015): starting
10:46:21 (3348783): wrapper: running run_atlas (--nthreads 4)
[2024-05-26 10:46:21] Arguments: --nthreads 4
[2024-05-26 10:46:21] Threads: 4
[2024-05-26 10:46:21] Checking for CVMFS
[2024-05-26 10:46:21] No cvmfs_config command found, will try listing directly
[2024-05-26 10:46:21] CVMFS is ok
[2024-05-26 10:46:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-26 10:46:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-26 10:46:21] Further information can be found at the LHC@home message board.
[2024-05-26 10:46:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-26 10:46:21] Checking for apptainer binary...
[2024-05-26 10:46:21] which: no apptainer in ((null))
[2024-05-26 10:46:21] apptainer is not installed, using version from CVMFS
[2024-05-26 10:46:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-26 10:46:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-26 10:46:22] apptainer works
[2024-05-26 10:46:22] Set ATHENA_PROC_NUMBER=4
[2024-05-26 10:46:22] Set ATHENA_CORE_NUMBER=4
[2024-05-26 10:46:22] Starting ATLAS job with PandaID=6210076062
[2024-05-26 10:46:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-26 13:06:55]  *** The last 200 lines of the pilot log: ***
[2024-05-26 13:06:55] 2024-05-26 11:06:34,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-26 13:06:55] 2024-05-26 11:06:34,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-26 13:06:55] 2024-05-26 11:06:34,016 | INFO     | fitting pss+swap vs Time
[2024-05-26 13:06:55] 2024-05-26 11:06:34,016 | INFO     | model: linear, x: [1716713216.0, 1716713277.0, 1716713338.0, 1716713399.0, 1716713460.0, 1716713521.0, 1716713582.0, 1716713643.0, 1716713704.0, 1716713765.0, 1716
[2024-05-26 13:06:55] 2024-05-26 11:06:34,016 | INFO     | sum of square deviations: 814878534.5
[2024-05-26 13:06:55] 2024-05-26 11:06:34,017 | INFO     | sum of deviations: 50425194665.5
[2024-05-26 13:06:55] 2024-05-26 11:06:34,017 | INFO     | mean x: 1716717394.5
[2024-05-26 13:06:55] 2024-05-26 11:06:34,017 | INFO     | mean y: 2223914.6304347827
[2024-05-26 13:06:55] 2024-05-26 11:06:34,017 | INFO     | -- intersect: -106229324884.75993
[2024-05-26 13:06:55] 2024-05-26 11:06:34,017 | INFO     | intersect: -106229324884.75993
[2024-05-26 13:06:55] 2024-05-26 11:06:34,018 | INFO     | chi2: 4.85501766266304
[2024-05-26 13:06:55] 2024-05-26 11:06:34,018 | INFO     | model: linear, x: [1716713216.0, 1716713277.0, 1716713338.0, 1716713399.0, 1716713460.0, 1716713521.0, 1716713582.0, 1716713643.0, 1716713704.0, 1716713765.0, 1716
[2024-05-26 13:06:55] 2024-05-26 11:06:34,018 | INFO     | sum of square deviations: 729472282.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,019 | INFO     | sum of deviations: 56887807061.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,019 | INFO     | mean x: 1716717242.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,019 | INFO     | mean y: 2234994.172932331
[2024-05-26 13:06:55] 2024-05-26 11:06:34,019 | INFO     | -- intersect: -133875750024.57524
[2024-05-26 13:06:55] 2024-05-26 11:06:34,019 | INFO     | intersect: -133875750024.57524
[2024-05-26 13:06:55] 2024-05-26 11:06:34,019 | INFO     | chi2: 4.058426279810153
[2024-05-26 13:06:55] 2024-05-26 11:06:34,019 | INFO     | current chi2=4.058426279810153 (change=16.407589800938986 %)
[2024-05-26 13:06:55] 2024-05-26 11:06:34,019 | INFO     | right removable region: 132
[2024-05-26 13:06:55] 2024-05-26 11:06:34,020 | INFO     | model: linear, x: [1716713521.0, 1716713582.0, 1716713643.0, 1716713704.0, 1716713765.0, 1716713826.0, 1716713887.0, 1716713948.0, 1716714009.0, 1716714070.0, 1716
[2024-05-26 13:06:55] 2024-05-26 11:06:34,020 | INFO     | sum of square deviations: 729472282.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,020 | INFO     | sum of deviations: 19504682228.999996
[2024-05-26 13:06:55] 2024-05-26 11:06:34,020 | INFO     | mean x: 1716717547.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,021 | INFO     | mean y: 2278905.977443609
[2024-05-26 13:06:55] 2024-05-26 11:06:34,021 | INFO     | -- intersect: -45899438071.36943
[2024-05-26 13:06:55] 2024-05-26 11:06:34,021 | INFO     | intersect: -45899438071.36943
[2024-05-26 13:06:55] 2024-05-26 11:06:34,021 | INFO     | chi2: 2.3640227600662627
[2024-05-26 13:06:55] 2024-05-26 11:06:34,021 | INFO     | current chi2=2.3640227600662627 (change=51.30763831722982 %)
[2024-05-26 13:06:55] 2024-05-26 11:06:34,021 | INFO     | model: linear, x: [1716713826.0, 1716713887.0, 1716713948.0, 1716714009.0, 1716714070.0, 1716714131.0, 1716714192.0, 1716714253.0, 1716714314.0, 1716714375.0, 1716
[2024-05-26 13:06:55] 2024-05-26 11:06:34,021 | INFO     | sum of square deviations: 650252192.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,022 | INFO     | sum of deviations: -5398849835.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,022 | INFO     | mean x: 1716717699.5
[2024-05-26 13:06:55] 2024-05-26 11:06:34,022 | INFO     | mean y: 2326861.53125
[2024-05-26 13:06:55] 2024-05-26 11:06:34,022 | INFO     | -- intersect: 14255721440.918003
[2024-05-26 13:06:55] 2024-05-26 11:06:34,022 | INFO     | intersect: 14255721440.918003
[2024-05-26 13:06:55] 2024-05-26 11:06:34,023 | INFO     | chi2: 0.8819251343390688
[2024-05-26 13:06:55] 2024-05-26 11:06:34,023 | INFO     | current chi2=0.8819251343390688 (change=62.693881411093145 %)
[2024-05-26 13:06:55] 2024-05-26 11:06:34,023 | INFO     | model: linear, x: [1716714131.0, 1716714192.0, 1716714253.0, 1716714314.0, 1716714375.0, 1716714436.0, 1716714497.0, 1716714558.0, 1716714619.0, 1716714680.0, 1716
[2024-05-26 13:06:55] 2024-05-26 11:06:34,023 | INFO     | sum of square deviations: 576985702.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,024 | INFO     | sum of deviations: -7391544215.999999
[2024-05-26 13:06:55] 2024-05-26 11:06:34,024 | INFO     | mean x: 1716717852.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,024 | INFO     | mean y: 2330869.4796747966
[2024-05-26 13:06:55] 2024-05-26 11:06:34,024 | INFO     | -- intersect: 21994549854.231125
[2024-05-26 13:06:55] 2024-05-26 11:06:34,024 | INFO     | intersect: 21994549854.231125
[2024-05-26 13:06:55] 2024-05-26 11:06:34,024 | INFO     | chi2: 0.8432655846994132
[2024-05-26 13:06:55] 2024-05-26 11:06:34,024 | INFO     | current chi2=0.8432655846994132 (change=4.383540975802653 %)
[2024-05-26 13:06:55] 2024-05-26 11:06:34,024 | INFO     | left removable region: 30
[2024-05-26 13:06:55] 2024-05-26 11:06:34,024 | INFO     | model: linear, x: [1716715046.0, 1716715107.0, 1716715168.0, 1716715229.0, 1716715290.0, 1716715351.0, 1716715412.0, 1716715473.0, 1716715534.0, 1716715595.0, 1716
[2024-05-26 13:06:55] 2024-05-26 11:06:34,025 | INFO     | sum of square deviations: 329031285.5
[2024-05-26 13:06:55] 2024-05-26 11:06:34,025 | INFO     | sum of deviations: 956571317.0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,025 | INFO     | mean x: 1716718126.5
[2024-05-26 13:06:55] 2024-05-26 11:06:34,025 | INFO     | mean y: 2346380.294117647
[2024-05-26 13:06:55] 2024-05-26 11:06:34,025 | INFO     | -- intersect: -4988556891.072391
[2024-05-26 13:06:55] 2024-05-26 11:06:34,025 | INFO     | intersect: -4988556891.072391
[2024-05-26 13:06:55] 2024-05-26 11:06:34,026 | INFO     | chi2: 0.00011420660731137435
[2024-05-26 13:06:55] 2024-05-26 11:06:34,026 | INFO     | -- intersect: -4988556891.072391
[2024-05-26 13:06:55] 2024-05-26 11:06:34,026 | INFO     | current memory leak: 2.91 B/s (using 102 data points, chi2=0.00)
[2024-05-26 13:06:55] 2024-05-26 11:06:34,026 | INFO     | ..............................
[2024-05-26 13:06:55] 2024-05-26 11:06:34,026 | INFO     | . Timing measurements:
[2024-05-26 13:06:55] 2024-05-26 11:06:34,027 | INFO     | . get job = 0 s
[2024-05-26 13:06:55] 2024-05-26 11:06:34,027 | INFO     | . initial setup = 1 s
[2024-05-26 13:06:55] 2024-05-26 11:06:34,027 | INFO     | . payload setup = 5 s
[2024-05-26 13:06:55] 2024-05-26 11:06:34,027 | INFO     | . stage-in = 0 s
[2024-05-26 13:06:55] 2024-05-26 11:06:34,027 | INFO     | . payload execution = 8372 s
[2024-05-26 13:06:55] 2024-05-26 11:06:34,027 | INFO     | . stage-out = 0 s
[2024-05-26 13:06:55] 2024-05-26 11:06:34,027 | INFO     | . log creation = 0 s
[2024-05-26 13:06:55] 2024-05-26 11:06:34,027 | INFO     | ..............................
[2024-05-26 13:06:55] 2024-05-26 11:06:34,615 | INFO     | 
[2024-05-26 13:06:55] 2024-05-26 11:06:34,615 | INFO     | job summary report
[2024-05-26 13:06:55] 2024-05-26 11:06:34,615 | INFO     | --------------------------------------------------
[2024-05-26 13:06:55] 2024-05-26 11:06:34,615 | INFO     | PanDA job id: 6210076062
[2024-05-26 13:06:55] 2024-05-26 11:06:34,615 | INFO     | task id: 38776104
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | errors: (none)
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | pilot state: finished 
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | transexitcode: 0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | exeerrorcode: 0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | exeerrordiag: 
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | exitcode: 0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | exitmsg: OK
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | cpuconsumptiontime: 30799 s
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | nevents: 400
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | neventsw: 0
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | pid: 3360916
[2024-05-26 13:06:55] 2024-05-26 11:06:34,616 | INFO     | pgrp: 3360916
[2024-05-26 13:06:55] 2024-05-26 11:06:34,617 | INFO     | corecount: 4
[2024-05-26 13:06:55] 2024-05-26 11:06:34,617 | INFO     | event service: False
[2024-05-26 13:06:55] 2024-05-26 11:06:34,617 | INFO     | sizes: {0: 2378632, 1: 2378774, 5: 2378980, 11: 2379036, 8381: 2406879, 8382: 2416045, 8388: 2416159}
[2024-05-26 13:06:55] 2024-05-26 11:06:34,617 | INFO     | --------------------------------------------------
[2024-05-26 13:06:55] 2024-05-26 11:06:34,617 | INFO     | 
[2024-05-26 13:06:55] 2024-05-26 11:06:34,617 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/1
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,641 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | job 6210076062 has completed (purged errors)
[2024-05-26 13:06:55] 2024-05-26 11:06:34,642 | INFO     | overall cleanup function is called
[2024-05-26 13:06:55] 2024-05-26 11:06:35,645 | INFO     | --- collectZombieJob: --- 10, [3360916]
[2024-05-26 13:06:55] 2024-05-26 11:06:35,646 | INFO     | zombie collector waiting for pid 3360916
[2024-05-26 13:06:55] 2024-05-26 11:06:35,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-26 13:06:55] 2024-05-26 11:06:36,651 | INFO     | collected zombie processes
[2024-05-26 13:06:55] 2024-05-26 11:06:36,651 | INFO     | will now attempt to kill all subprocesses of pid=3360916
[2024-05-26 13:06:55] 2024-05-26 11:06:36,849 | INFO     | process IDs to be killed: [3360916] (in reverse order)
[2024-05-26 13:06:55] 2024-05-26 11:06:37,014 | WARNING  | found no corresponding commands to process id(s)
[2024-05-26 13:06:55] 2024-05-26 11:06:37,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-26 13:06:55] 2024-05-26 11:06:37,030 | INFO     | did not find any defunct processes belonging to 3360916
[2024-05-26 13:06:55] 2024-05-26 11:06:37,039 | INFO     | did not find any defunct processes belonging to 3360916
[2024-05-26 13:06:55] 2024-05-26 11:06:37,039 | INFO     | ready for new job
[2024-05-26 13:06:55] 2024-05-26 11:06:37,039 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-26 13:06:55] 2024-05-26 11:06:37,040 | INFO     | *************************************
[2024-05-26 13:06:55] 2024-05-26 11:06:37,040 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-26 13:06:55] 2024-05-26 11:06:37,040 | INFO     | *************************************
[2024-05-26 13:06:55] 2024-05-26 11:06:37,040 | INFO     | 
[2024-05-26 13:06:55] 2024-05-26 11:06:37,045 | INFO     | architecture information:
[2024-05-26 13:06:55] 2024-05-26 11:06:37,045 | INFO     | executing command: cat /etc/os-release
[2024-05-26 13:06:55] 2024-05-26 11:06:37,066 | INFO     | cat /etc/os-release:
[2024-05-26 13:06:55] NAME="CentOS Linux"
[2024-05-26 13:06:55] VERSION="7 (Core)"
[2024-05-26 13:06:55] ID="centos"
[2024-05-26 13:06:55] ID_LIKE="rhel fedora"
[2024-05-26 13:06:55] VERSION_ID="7"
[2024-05-26 13:06:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-26 13:06:55] ANSI_COLOR="0;31"
[2024-05-26 13:06:55] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-26 13:06:55] HOME_URL="https://www.centos.org/"
[2024-05-26 13:06:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-26 13:06:55] 
[2024-05-26 13:06:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-26 13:06:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-26 13:06:55] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-26 13:06:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-26 13:06:55] 
[2024-05-26 13:06:55] 2024-05-26 11:06:37,066 | INFO     | *************************************
[2024-05-26 13:06:55] 2024-05-26 11:06:37,569 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/1
[2024-05-26 13:06:55] 2024-05-26 11:06:37,586 | INFO     | sufficient remaining disk space (3197617831936 B)
[2024-05-26 13:06:55] 2024-05-26 11:06:37,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-26 13:06:55] 2024-05-26 11:06:37,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-26 13:06:55] 2024-05-26 11:06:37,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-26 13:06:55] 2024-05-26 11:06:37,587 | INFO     | aborting loop
[2024-05-26 13:06:55] 2024-05-26 11:06:37,621 | INFO     | found 0 job(s) in 20 queues
[2024-05-26 13:06:55] 2024-05-26 11:06:37,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-26 13:06:55] 2024-05-26 11:06:37,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-26 13:06:55] 2024-05-26 11:06:38,210 | INFO     | all job control threads have been joined
[2024-05-26 13:06:55] 2024-05-26 11:06:38,242 | INFO     | all data control threads have been joined
[2024-05-26 13:06:55] 2024-05-26 11:06:38,589 | INFO     | [job] job monitor thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:38,591 | INFO     | [job] retrieve thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:38,707 | INFO     | [job] validate thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:38,708 | INFO     | [payload] failed_post thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:38,867 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-26 13:06:55] 2024-05-26 11:06:38,875 | INFO     | [payload] validate_pre thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:38,914 | INFO     | all payload control threads have been joined
[2024-05-26 13:06:55] 2024-05-26 11:06:38,966 | INFO     | [job] create_data_payload thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:38,976 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-26 13:06:55] 2024-05-26 11:06:39,006 | INFO     | [payload] execute_payloads thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:39,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-26 13:06:55] 2024-05-26 11:06:39,215 | INFO     | [job] control thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:39,246 | INFO     | [data] control thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:39,788 | INFO     | [payload] validate_post thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:39,922 | INFO     | [payload] control thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:40,031 | INFO     | [data] copytool_in thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:40,136 | INFO     | [job] queue monitor thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:40,873 | INFO     | [data] copytool_out thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:42,982 | INFO     | [data] queue_monitor thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:48,322 | INFO     | job.realtimelogging is not enabled
[2024-05-26 13:06:55] 2024-05-26 11:06:49,327 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-26 13:06:55] 2024-05-26 11:06:49,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47563085648960)>', '<ExcThread(monitor, started 47563256899328)>']
[2024-05-26 13:06:55] 2024-05-26 11:06:49,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-26 13:06:55] 2024-05-26 11:06:49,682 | INFO     | [monitor] control thread has ended
[2024-05-26 13:06:55] 2024-05-26 11:06:54,620 | INFO     | all workflow threads have been joined
[2024-05-26 13:06:55] 2024-05-26 11:06:54,621 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-26 13:06:55] 2024-05-26 11:06:54,621 | INFO     | traces error code: 0
[2024-05-26 13:06:55] 2024-05-26 11:06:54,621 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-26 13:06:55] 2024-05-26 11:06:54,710 [wrapper] ==== pilot stdout END ====
[2024-05-26 13:06:55] 2024-05-26 11:06:54,713 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-26 13:06:55] 2024-05-26 11:06:54,715 [wrapper] pilotpid: 3353435
[2024-05-26 13:06:55] 2024-05-26 11:06:54,717 [wrapper] Pilot exit status: 0
[2024-05-26 13:06:55] 2024-05-26 11:06:54,730 [wrapper] pandaids: 6210076062
[2024-05-26 13:06:55] 2024-05-26 11:06:54,817 [wrapper] cleanup: SIGTERM to supervisor_pilot 4016407 3353436
[2024-05-26 13:06:55] 2024-05-26 11:06:54,820 [wrapper] Test setup, not cleaning
[2024-05-26 13:06:55] 2024-05-26 11:06:54,823 [wrapper] ==== wrapper stdout END ====
[2024-05-26 13:06:55] 2024-05-26 11:06:54,825 [wrapper] ==== wrapper stderr END ====
[2024-05-26 13:06:55] 2024-05-26 11:06:54,830 [wrapper] apfmon messages muted
[2024-05-26 13:06:55]  *** Error codes and diagnostics ***
[2024-05-26 13:06:55]     "exeErrorCode": 0,
[2024-05-26 13:06:55]     "exeErrorDiag": "",
[2024-05-26 13:06:55]     "pilotErrorCode": 0,
[2024-05-26 13:06:55]     "pilotErrorDiag": "",
[2024-05-26 13:06:55]  *** Listing of results directory ***
[2024-05-26 13:06:55] total 814084
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc    467845 May 20 02:07 pilot3.tar.gz
[2024-05-26 13:06:55] -rwx------ 1 boinc boinc     32251 May 20 02:20 runpilot2-wrapper.sh
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc      5633 May 20 02:20 queuedata.json
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc       100 May 26 10:20 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-26 13:06:55] -rwxr-xr-x 1 boinc boinc      7986 May 26 10:20 run_atlas
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc       105 May 26 10:20 job.xml
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc      6644 May 26 10:46 init_data.xml
[2024-05-26 13:06:55] -rw-r--r-- 2 boinc boinc 600982026 May 26 10:46 EVNT.38776100._000811.pool.root.1
[2024-05-26 13:06:55] -rw-r--r-- 2 boinc boinc     17537 May 26 10:46 start_atlas.sh
[2024-05-26 13:06:55] drwxrwx--x 2 boinc boinc      4096 May 26 10:46 shared
[2024-05-26 13:06:55] -rw-r--r-- 2 boinc boinc    480002 May 26 10:46 input.tar.gz
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc         0 May 26 10:46 boinc_lockfile
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc      2645 May 26 10:46 pandaJob.out
[2024-05-26 13:06:55] -rw------- 1 boinc boinc       424 May 26 10:46 setup.sh.local
[2024-05-26 13:06:55] -rw------- 1 boinc boinc   1010165 May 26 10:46 agis_schedconf.cvmfs.json
[2024-05-26 13:06:55] -rw------- 1 boinc boinc         0 May 26 10:46 agis_ddmendpoints.agis.ALL.json
[2024-05-26 13:06:55] -rw------- 1 boinc boinc   1317222 May 26 10:46 cric_ddmendpoints.json
[2024-05-26 13:06:55] drwx------ 4 boinc boinc      4096 May 26 10:46 pilot3
[2024-05-26 13:06:55] -rw------- 1 boinc boinc        95 May 26 13:05 pilot_heartbeat.json
[2024-05-26 13:06:55] -rw------- 1 boinc boinc 226830470 May 26 13:05 HITS.38776104._025514.pool.root.1
[2024-05-26 13:06:55] -rw------- 1 boinc boinc      1031 May 26 13:06 memory_monitor_summary.json
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc        27 May 26 13:06 wrapper_checkpoint.txt
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc      8192 May 26 13:06 boinc_mmap_file
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc       530 May 26 13:06 boinc_task_state.xml
[2024-05-26 13:06:55] -rw------- 1 boinc boinc    277986 May 26 13:06 log.38776104._025514.job.log.tgz.1
[2024-05-26 13:06:55] -rw------- 1 boinc boinc      7706 May 26 13:06 heartbeat.json
[2024-05-26 13:06:55] -rw------- 1 boinc boinc      4294 May 26 13:06 pilotlog.txt
[2024-05-26 13:06:55] -rw------- 1 boinc boinc    865540 May 26 13:06 log.38776104._025514.job.log.1
[2024-05-26 13:06:55] -rw------- 1 boinc boinc       357 May 26 13:06 output.list
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc       620 May 26 13:06 runtime_log
[2024-05-26 13:06:55] -rw------- 1 boinc boinc   1167360 May 26 13:06 result.tar.gz
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc     11409 May 26 13:06 runtime_log.err
[2024-05-26 13:06:55] -rw------- 1 boinc boinc       655 May 26 13:06 isuKDmLw5S5n7Olcko1bjSoqABFKDmABFKDmOtvXDmn6aKDml71ufm.diag
[2024-05-26 13:06:55] -rw-r--r-- 1 boinc boinc     21258 May 26 13:06 stderr.txt
[2024-05-26 13:06:55] HITS file was successfully produced:
[2024-05-26 13:06:55] -rw------- 1 boinc boinc 226830470 May 26 13:05 shared/HITS.pool.root.1
[2024-05-26 13:06:55]  *** Contents of shared directory: ***
[2024-05-26 13:06:55] total 810056
[2024-05-26 13:06:55] -rw-r--r-- 2 boinc boinc 600982026 May 26 10:46 ATLAS.root_0
[2024-05-26 13:06:55] -rw-r--r-- 2 boinc boinc     17537 May 26 10:46 start_atlas.sh
[2024-05-26 13:06:55] -rw-r--r-- 2 boinc boinc    480002 May 26 10:46 input.tar.gz
[2024-05-26 13:06:55] -rw------- 1 boinc boinc 226830470 May 26 13:05 HITS.pool.root.1
[2024-05-26 13:06:55] -rw------- 1 boinc boinc   1167360 May 26 13:06 result.tar.gz
13:06:57 (3348783): run_atlas exited; CPU time 30620.537210
13:06:57 (3348783): called boinc_finish(0)

</stderr_txt>
]]>

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