Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:42:02 (26586): wrapper (7.7.26015): starting
13:42:02 (26586): wrapper: running run_atlas (--nthreads 4)
[2024-05-26 13:42:02] Arguments: --nthreads 4
[2024-05-26 13:42:02] Threads: 4
[2024-05-26 13:42:02] Checking for CVMFS
[2024-05-26 13:42:02] No cvmfs_config command found, will try listing directly
[2024-05-26 13:42:02] CVMFS is ok
[2024-05-26 13:42:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-26 13:42:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-26 13:42:02] Further information can be found at the LHC@home message board.
[2024-05-26 13:42:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-26 13:42:02] Checking for apptainer binary...
[2024-05-26 13:42:02] which: no apptainer in ((null))
[2024-05-26 13:42:02] apptainer is not installed, using version from CVMFS
[2024-05-26 13:42:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-26 13:42:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot76/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-26 13:42:02] apptainer works
[2024-05-26 13:42:02] Set ATHENA_PROC_NUMBER=4
[2024-05-26 13:42:02] Set ATHENA_CORE_NUMBER=4
[2024-05-26 13:42:02] Starting ATLAS job with PandaID=6210076048
[2024-05-26 13:42:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot76/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-26 15:44:34]  *** The last 200 lines of the pilot log: ***
[2024-05-26 15:44:34] 2024-05-26 13:44:21,246 | INFO     | model: linear, x: [1716723758.0, 1716723819.0, 1716723880.0, 1716723941.0, 1716724002.0, 1716724063.0, 1716724124.0, 1716724185.0, 1716724246.0, 1716724307.0, 1716
[2024-05-26 15:44:34] 2024-05-26 13:44:21,246 | INFO     | sum of square deviations: 471562330.0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,247 | INFO     | sum of deviations: 48017331752.99999
[2024-05-26 15:44:34] 2024-05-26 13:44:21,247 | INFO     | mean x: 1716727235.0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,247 | INFO     | mean y: 2208731.1217391305
[2024-05-26 15:44:34] 2024-05-26 13:44:21,247 | INFO     | -- intersect: -174805353129.05777
[2024-05-26 15:44:34] 2024-05-26 13:44:21,247 | INFO     | intersect: -174805353129.05777
[2024-05-26 15:44:34] 2024-05-26 13:44:21,247 | INFO     | chi2: 4.0231108525736765
[2024-05-26 15:44:34] 2024-05-26 13:44:21,247 | INFO     | current chi2=4.0231108525736765 (change=0.24664349166657745 %)
[2024-05-26 15:44:34] 2024-05-26 13:44:21,247 | INFO     | right removable region: 114
[2024-05-26 15:44:34] 2024-05-26 13:44:21,248 | INFO     | model: linear, x: [1716724063.0, 1716724124.0, 1716724185.0, 1716724246.0, 1716724307.0, 1716724368.0, 1716724429.0, 1716724490.0, 1716724551.0, 1716724612.0, 1716
[2024-05-26 15:44:34] 2024-05-26 13:44:21,248 | INFO     | sum of square deviations: 471562330.0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,249 | INFO     | sum of deviations: 23665813515.999996
[2024-05-26 15:44:34] 2024-05-26 13:44:21,249 | INFO     | mean x: 1716727540.0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,249 | INFO     | mean y: 2277288.9043478263
[2024-05-26 15:44:34] 2024-05-26 13:44:21,249 | INFO     | -- intersect: -86153361604.94331
[2024-05-26 15:44:34] 2024-05-26 13:44:21,249 | INFO     | intersect: -86153361604.94331
[2024-05-26 15:44:34] 2024-05-26 13:44:21,249 | INFO     | chi2: 1.5511885703710286
[2024-05-26 15:44:34] 2024-05-26 13:44:21,249 | INFO     | current chi2=1.5511885703710286 (change=61.53815489004364 %)
[2024-05-26 15:44:34] 2024-05-26 13:44:21,250 | INFO     | model: linear, x: [1716724368.0, 1716724429.0, 1716724490.0, 1716724551.0, 1716724612.0, 1716724673.0, 1716724734.0, 1716724795.0, 1716724856.0, 1716724917.0, 1716
[2024-05-26 15:44:34] 2024-05-26 13:44:21,250 | INFO     | sum of square deviations: 412686807.5
[2024-05-26 15:44:34] 2024-05-26 13:44:21,250 | INFO     | sum of deviations: 2049135698.4999998
[2024-05-26 15:44:34] 2024-05-26 13:44:21,251 | INFO     | mean x: 1716727692.5
[2024-05-26 15:44:34] 2024-05-26 13:44:21,251 | INFO     | mean y: 2333319.390909091
[2024-05-26 15:44:34] 2024-05-26 13:44:21,251 | INFO     | -- intersect: -8521825765.353472
[2024-05-26 15:44:34] 2024-05-26 13:44:21,251 | INFO     | intersect: -8521825765.353472
[2024-05-26 15:44:34] 2024-05-26 13:44:21,251 | INFO     | chi2: 0.04444016925140382
[2024-05-26 15:44:34] 2024-05-26 13:44:21,251 | INFO     | current chi2=0.04444016925140382 (change=97.13508917611648 %)
[2024-05-26 15:44:34] 2024-05-26 13:44:21,252 | INFO     | model: linear, x: [1716724673.0, 1716724734.0, 1716724795.0, 1716724856.0, 1716724917.0, 1716724978.0, 1716725039.0, 1716725100.0, 1716725161.0, 1716725222.0, 1716
[2024-05-26 15:44:34] 2024-05-26 13:44:21,252 | INFO     | sum of square deviations: 358927660.0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,252 | INFO     | sum of deviations: -265194450.0000001
[2024-05-26 15:44:34] 2024-05-26 13:44:21,252 | INFO     | mean x: 1716727845.0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,253 | INFO     | mean y: 2339705.523809524
[2024-05-26 15:44:34] 2024-05-26 13:44:21,253 | INFO     | -- intersect: 1270747653.3940303
[2024-05-26 15:44:34] 2024-05-26 13:44:21,253 | INFO     | intersect: 1270747653.3940303
[2024-05-26 15:44:34] 2024-05-26 13:44:21,253 | INFO     | chi2: 0.0013500204755705469
[2024-05-26 15:44:34] 2024-05-26 13:44:21,253 | INFO     | current chi2=0.0013500204755705469 (change=96.96216171470161 %)
[2024-05-26 15:44:34] 2024-05-26 13:44:21,253 | INFO     | model: linear, x: [1716724978.0, 1716725039.0, 1716725100.0, 1716725161.0, 1716725222.0, 1716725283.0, 1716725344.0, 1716725405.0, 1716725466.0, 1716725527.0, 1716
[2024-05-26 15:44:34] 2024-05-26 13:44:21,254 | INFO     | sum of square deviations: 310052325.0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,254 | INFO     | sum of deviations: -115121091.00000007
[2024-05-26 15:44:34] 2024-05-26 13:44:21,255 | INFO     | mean x: 1716727997.5
[2024-05-26 15:44:34] 2024-05-26 13:44:21,255 | INFO     | mean y: 2339234.1
[2024-05-26 15:44:34] 2024-05-26 13:44:21,255 | INFO     | -- intersect: 639752935.230754
[2024-05-26 15:44:34] 2024-05-26 13:44:21,255 | INFO     | intersect: 639752935.230754
[2024-05-26 15:44:34] 2024-05-26 13:44:21,255 | INFO     | chi2: 0.0012816215939993238
[2024-05-26 15:44:34] 2024-05-26 13:44:21,255 | INFO     | current chi2=0.0012816215939993238 (change=5.066506975926883 %)
[2024-05-26 15:44:34] 2024-05-26 13:44:21,255 | INFO     | left removable region: 40
[2024-05-26 15:44:34] 2024-05-26 13:44:21,256 | INFO     | model: linear, x: [1716726198.0, 1716726259.0, 1716726320.0, 1716726381.0, 1716726442.0, 1716726503.0, 1716726564.0, 1716726625.0, 1716726686.0, 1716726747.0, 1716
[2024-05-26 15:44:34] 2024-05-26 13:44:21,256 | INFO     | sum of square deviations: 125630262.5
[2024-05-26 15:44:34] 2024-05-26 13:44:21,256 | INFO     | sum of deviations: 304356053.49999994
[2024-05-26 15:44:34] 2024-05-26 13:44:21,256 | INFO     | mean x: 1716728424.5
[2024-05-26 15:44:34] 2024-05-26 13:44:21,256 | INFO     | mean y: 2337348.364864865
[2024-05-26 15:44:34] 2024-05-26 13:44:21,256 | INFO     | -- intersect: -4156666046.315558
[2024-05-26 15:44:34] 2024-05-26 13:44:21,256 | INFO     | intersect: -4156666046.315558
[2024-05-26 15:44:34] 2024-05-26 13:44:21,257 | INFO     | chi2: 8.887813307649657e-05
[2024-05-26 15:44:34] 2024-05-26 13:44:21,257 | INFO     | -- intersect: -4156666046.315558
[2024-05-26 15:44:34] 2024-05-26 13:44:21,257 | INFO     | current memory leak: 2.42 B/s (using 74 data points, chi2=0.00)
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | ..............................
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | . Timing measurements:
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | . get job = 0 s
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | . initial setup = 1 s
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | . payload setup = 5 s
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | . stage-in = 0 s
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | . payload execution = 7298 s
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | . stage-out = 0 s
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | . log creation = 0 s
[2024-05-26 15:44:34] 2024-05-26 13:44:21,258 | INFO     | ..............................
[2024-05-26 15:44:34] 2024-05-26 13:44:21,418 | WARNING  | process 38733 is no longer using CPU - aborting
[2024-05-26 15:44:34] 2024-05-26 13:44:21,419 | INFO     | 
[2024-05-26 15:44:34] 2024-05-26 13:44:21,422 | INFO     | aborting job monitoring since job object (job id=6210076048) has expired
[2024-05-26 15:44:34] 2024-05-26 13:44:21,422 | INFO     | job summary report
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | --------------------------------------------------
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | PanDA job id: 6210076048
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | task id: 38776104
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | errors: (none)
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | pilot state: finished 
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | transexitcode: 0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | exeerrorcode: 0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | exeerrordiag: 
[2024-05-26 15:44:34] 2024-05-26 13:44:21,423 | INFO     | exitcode: 0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | exitmsg: OK
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | cpuconsumptiontime: 26531 s
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | nevents: 400
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | neventsw: 0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | pid: 38733
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | pgrp: 38733
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | corecount: 4
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | event service: False
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | sizes: {0: 2377839, 1: 2378774, 5: 2378980, 12: 2379036, 7307: 2406357, 7308: 2415339, 7311: 2415523, 7314: 2415693}
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | --------------------------------------------------
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | 
[2024-05-26 15:44:34] 2024-05-26 13:44:21,424 | INFO     | executing command: ls -lF /scratch/boinc/var/slot76/slots/0
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,441 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-26 15:44:34] 2024-05-26 13:44:21,441 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,441 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-26 15:44:34] 2024-05-26 13:44:21,441 | INFO     | job 6210076048 has completed (purged errors)
[2024-05-26 15:44:34] 2024-05-26 13:44:21,441 | INFO     | overall cleanup function is called
[2024-05-26 15:44:34] 2024-05-26 13:44:22,448 | INFO     | --- collectZombieJob: --- 10, [38733]
[2024-05-26 15:44:34] 2024-05-26 13:44:22,448 | INFO     | zombie collector waiting for pid 38733
[2024-05-26 15:44:34] 2024-05-26 13:44:22,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-26 15:44:34] 2024-05-26 13:44:23,453 | INFO     | collected zombie processes
[2024-05-26 15:44:34] 2024-05-26 13:44:23,453 | INFO     | will now attempt to kill all subprocesses of pid=38733
[2024-05-26 15:44:34] 2024-05-26 13:44:23,686 | INFO     | process IDs to be killed: [38733] (in reverse order)
[2024-05-26 15:44:34] 2024-05-26 13:44:23,833 | WARNING  | found no corresponding commands to process id(s)
[2024-05-26 15:44:34] 2024-05-26 13:44:23,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-26 15:44:34] 2024-05-26 13:44:23,853 | INFO     | did not find any defunct processes belonging to 38733
[2024-05-26 15:44:34] 2024-05-26 13:44:23,865 | INFO     | did not find any defunct processes belonging to 38733
[2024-05-26 15:44:34] 2024-05-26 13:44:23,866 | INFO     | ready for new job
[2024-05-26 15:44:34] 2024-05-26 13:44:23,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-26 15:44:34] 2024-05-26 13:44:23,867 | INFO     | *************************************
[2024-05-26 15:44:34] 2024-05-26 13:44:23,867 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-26 15:44:34] 2024-05-26 13:44:23,867 | INFO     | *************************************
[2024-05-26 15:44:34] 2024-05-26 13:44:23,867 | INFO     | 
[2024-05-26 15:44:34] 2024-05-26 13:44:23,874 | INFO     | architecture information:
[2024-05-26 15:44:34] 2024-05-26 13:44:23,874 | INFO     | executing command: cat /etc/os-release
[2024-05-26 15:44:34] 2024-05-26 13:44:23,888 | INFO     | cat /etc/os-release:
[2024-05-26 15:44:34] NAME="CentOS Linux"
[2024-05-26 15:44:34] VERSION="7 (Core)"
[2024-05-26 15:44:34] ID="centos"
[2024-05-26 15:44:34] ID_LIKE="rhel fedora"
[2024-05-26 15:44:34] VERSION_ID="7"
[2024-05-26 15:44:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-26 15:44:34] ANSI_COLOR="0;31"
[2024-05-26 15:44:34] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-26 15:44:34] HOME_URL="https://www.centos.org/"
[2024-05-26 15:44:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-26 15:44:34] 
[2024-05-26 15:44:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-26 15:44:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-26 15:44:34] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-26 15:44:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-26 15:44:34] 
[2024-05-26 15:44:34] 2024-05-26 13:44:23,888 | INFO     | *************************************
[2024-05-26 15:44:34] 2024-05-26 13:44:24,391 | INFO     | executing command: df -mP /scratch/boinc/var/slot76/slots/0
[2024-05-26 15:44:34] 2024-05-26 13:44:24,409 | INFO     | sufficient remaining disk space (3180051038208 B)
[2024-05-26 15:44:34] 2024-05-26 13:44:24,409 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-26 15:44:34] 2024-05-26 13:44:24,409 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-26 15:44:34] 2024-05-26 13:44:24,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-26 15:44:34] 2024-05-26 13:44:24,410 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-26 15:44:34] 2024-05-26 13:44:24,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-26 15:44:34] 2024-05-26 13:44:24,411 | INFO     | found 0 job(s) in 20 queues
[2024-05-26 15:44:34] 2024-05-26 13:44:24,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-26 15:44:34] 2024-05-26 13:44:24,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-26 15:44:34] 2024-05-26 13:44:24,492 | INFO     | all payload control threads have been joined
[2024-05-26 15:44:34] 2024-05-26 13:44:24,930 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-26 15:44:34] 2024-05-26 13:44:24,930 | INFO     | aborting loop
[2024-05-26 15:44:34] 2024-05-26 13:44:25,057 | INFO     | all job control threads have been joined
[2024-05-26 15:44:34] 2024-05-26 13:44:25,415 | INFO     | [job] retrieve thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:25,461 | INFO     | all data control threads have been joined
[2024-05-26 15:44:34] 2024-05-26 13:44:25,488 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:25,494 | INFO     | [job] validate thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:25,497 | INFO     | [payload] control thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:25,512 | INFO     | [data] copytool_in thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:25,629 | INFO     | [payload] failed_post thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:25,739 | INFO     | [job] create_data_payload thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:25,742 | INFO     | [payload] validate_pre thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:25,750 | INFO     | [payload] execute_payloads thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:25,936 | INFO     | [job] job monitor thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:26,062 | INFO     | [job] control thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:26,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-26 15:44:34] 2024-05-26 13:44:26,415 | INFO     | [data] copytool_out thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:26,466 | INFO     | [data] control thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:26,517 | INFO     | [payload] validate_post thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:27,361 | INFO     | [job] queue monitor thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:28,416 | INFO     | [data] queue_monitor thread has finished
[2024-05-26 15:44:34] 2024-05-26 13:44:28,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47443542410304)>', '<ExcThread(monitor, started 47443722065664)>']
[2024-05-26 15:44:34] 2024-05-26 13:44:29,433 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-26 15:44:34] 2024-05-26 13:44:29,433 | INFO     | [monitor] control thread has ended
[2024-05-26 15:44:34] 2024-05-26 13:44:33,996 | INFO     | all workflow threads have been joined
[2024-05-26 15:44:34] 2024-05-26 13:44:33,996 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-26 15:44:34] 2024-05-26 13:44:33,996 | INFO     | traces error code: 0
[2024-05-26 15:44:34] 2024-05-26 13:44:33,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-26 15:44:34] 2024-05-26 13:44:34,058 [wrapper] ==== pilot stdout END ====
[2024-05-26 15:44:34] 2024-05-26 13:44:34,060 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-26 15:44:34] 2024-05-26 13:44:34,062 [wrapper] pilotpid: 31238
[2024-05-26 15:44:34] 2024-05-26 13:44:34,063 [wrapper] Pilot exit status: 0
[2024-05-26 15:44:34] 2024-05-26 13:44:34,073 [wrapper] pandaids: 6210076048
[2024-05-26 15:44:34] 2024-05-26 13:44:34,153 [wrapper] cleanup: SIGTERM to supervisor_pilot  605416 31239
[2024-05-26 15:44:34] 2024-05-26 13:44:34,155 [wrapper] Test setup, not cleaning
[2024-05-26 15:44:34] 2024-05-26 13:44:34,157 [wrapper] ==== wrapper stdout END ====
[2024-05-26 15:44:34] 2024-05-26 13:44:34,159 [wrapper] ==== wrapper stderr END ====
[2024-05-26 15:44:34] 2024-05-26 13:44:34,163 [wrapper] apfmon messages muted
[2024-05-26 15:44:34]  *** Error codes and diagnostics ***
[2024-05-26 15:44:34]     "exeErrorCode": 0,
[2024-05-26 15:44:34]     "exeErrorDiag": "",
[2024-05-26 15:44:34]     "pilotErrorCode": 0,
[2024-05-26 15:44:34]     "pilotErrorDiag": "",
[2024-05-26 15:44:34]  *** Listing of results directory ***
[2024-05-26 15:44:34] total 817500
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc    467845 May 20 02:07 pilot3.tar.gz
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc      5633 May 20 02:15 queuedata.json
[2024-05-26 15:44:34] -rwx------ 1 boinc boinc     32251 May 20 02:16 runpilot2-wrapper.sh
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc       100 May 26 13:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-26 15:44:34] -rwxr-xr-x 1 boinc boinc      7986 May 26 13:41 run_atlas
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc       105 May 26 13:41 job.xml
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc      6644 May 26 13:42 init_data.xml
[2024-05-26 15:44:34] -rw-r--r-- 2 boinc boinc 603695222 May 26 13:42 EVNT.38776100._000810.pool.root.1
[2024-05-26 15:44:34] -rw-r--r-- 2 boinc boinc     17537 May 26 13:42 start_atlas.sh
[2024-05-26 15:44:34] drwxrwx--x 2 boinc boinc      4096 May 26 13:42 shared
[2024-05-26 15:44:34] -rw-r--r-- 2 boinc boinc    480004 May 26 13:42 input.tar.gz
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc         0 May 26 13:42 boinc_lockfile
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc      2645 May 26 13:42 pandaJob.out
[2024-05-26 15:44:34] -rw------- 1 boinc boinc       424 May 26 13:42 setup.sh.local
[2024-05-26 15:44:34] -rw------- 1 boinc boinc   1010157 May 26 13:42 agis_schedconf.cvmfs.json
[2024-05-26 15:44:34] -rw------- 1 boinc boinc         0 May 26 13:42 agis_ddmendpoints.agis.ALL.json
[2024-05-26 15:44:34] -rw------- 1 boinc boinc   1317222 May 26 13:42 cric_ddmendpoints.json
[2024-05-26 15:44:34] drwx------ 4 boinc boinc      4096 May 26 13:42 pilot3
[2024-05-26 15:44:34] -rw------- 1 boinc boinc        95 May 26 15:43 pilot_heartbeat.json
[2024-05-26 15:44:34] -rw------- 1 boinc boinc 227816041 May 26 15:43 HITS.38776104._025504.pool.root.1
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc       530 May 26 15:43 boinc_task_state.xml
[2024-05-26 15:44:34] -rw------- 1 boinc boinc      1036 May 26 15:44 memory_monitor_summary.json
[2024-05-26 15:44:34] -rw------- 1 boinc boinc    286719 May 26 15:44 log.38776104._025504.job.log.tgz.1
[2024-05-26 15:44:34] -rw------- 1 boinc boinc      7711 May 26 15:44 heartbeat.json
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc      8192 May 26 15:44 boinc_mmap_file
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc        27 May 26 15:44 wrapper_checkpoint.txt
[2024-05-26 15:44:34] -rw------- 1 boinc boinc      4345 May 26 15:44 pilotlog.txt
[2024-05-26 15:44:34] -rw------- 1 boinc boinc    760635 May 26 15:44 log.38776104._025504.job.log.1
[2024-05-26 15:44:34] -rw------- 1 boinc boinc       357 May 26 15:44 output.list
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc       620 May 26 15:44 runtime_log
[2024-05-26 15:44:34] -rw------- 1 boinc boinc   1064960 May 26 15:44 result.tar.gz
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc     11409 May 26 15:44 runtime_log.err
[2024-05-26 15:44:34] -rw------- 1 boinc boinc       652 May 26 15:44 GIeKDmMs5S5nsSi4apGgGQJmABFKDmABFKDm4ySLDmk4UKDm7YGLxm.diag
[2024-05-26 15:44:34] -rw-r--r-- 1 boinc boinc     21401 May 26 15:44 stderr.txt
[2024-05-26 15:44:34] HITS file was successfully produced:
[2024-05-26 15:44:34] -rw------- 1 boinc boinc 227816041 May 26 15:43 shared/HITS.pool.root.1
[2024-05-26 15:44:34]  *** Contents of shared directory: ***
[2024-05-26 15:44:34] total 813568
[2024-05-26 15:44:34] -rw-r--r-- 2 boinc boinc 603695222 May 26 13:42 ATLAS.root_0
[2024-05-26 15:44:34] -rw-r--r-- 2 boinc boinc     17537 May 26 13:42 start_atlas.sh
[2024-05-26 15:44:34] -rw-r--r-- 2 boinc boinc    480004 May 26 13:42 input.tar.gz
[2024-05-26 15:44:34] -rw------- 1 boinc boinc 227816041 May 26 15:43 HITS.pool.root.1
[2024-05-26 15:44:34] -rw------- 1 boinc boinc   1064960 May 26 15:44 result.tar.gz
15:44:36 (26586): run_atlas exited; CPU time 26362.646221
15:44:36 (26586): called boinc_finish(0)

</stderr_txt>
]]>

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