Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:33:55 (3392704): wrapper (7.7.26015): starting
15:33:55 (3392704): wrapper: running run_atlas (--nthreads 4)
[2024-05-26 15:33:55] Arguments: --nthreads 4
[2024-05-26 15:33:55] Threads: 4
[2024-05-26 15:33:55] Checking for CVMFS
[2024-05-26 15:33:55] No cvmfs_config command found, will try listing directly
[2024-05-26 15:33:55] CVMFS is ok
[2024-05-26 15:33:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-26 15:33:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-26 15:33:55] Further information can be found at the LHC@home message board.
[2024-05-26 15:33:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-26 15:33:55] Checking for apptainer binary...
[2024-05-26 15:33:55] which: no apptainer in ((null))
[2024-05-26 15:33:55] apptainer is not installed, using version from CVMFS
[2024-05-26 15:33:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-26 15:33:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot64/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2024-05-26 15:33:56] apptainer works
[2024-05-26 15:33:56] Set ATHENA_PROC_NUMBER=4
[2024-05-26 15:33:56] Set ATHENA_CORE_NUMBER=4
[2024-05-26 15:33:56] Starting ATLAS job with PandaID=6210074227
[2024-05-26 15:33:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot64/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-27 03:05:25]  *** The last 200 lines of the pilot log: ***
[2024-05-27 03:05:25] 2024-05-27 01:04:58,644 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-27 03:05:25] 2024-05-27 01:04:58,713 | INFO     | job 6210074227 has state=finished
[2024-05-27 03:05:25] 2024-05-27 01:04:58,714 | INFO     | preparing for final server update for job 6210074227 in state='finished'
[2024-05-27 03:05:25] 2024-05-27 01:04:58,714 | INFO     | this job has now completed (state=finished)
[2024-05-27 03:05:25] 2024-05-27 01:04:58,714 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-27 03:05:25] 2024-05-27 01:04:58,714 | INFO     | job 6210074227 has finished - writing final server update
[2024-05-27 03:05:25] 2024-05-27 01:04:58,715 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1074774/.job.ad'
[2024-05-27 03:05:25] 2024-05-27 01:04:58,715 | INFO     | total number of processed events: 1850 (read)
[2024-05-27 03:05:25] 2024-05-27 01:04:58,725 | INFO     | executing command: lscpu
[2024-05-27 03:05:25] 2024-05-27 01:04:58,782 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-05-27 03:05:25] 2024-05-27 01:04:58,782 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-27 03:05:25] 2024-05-27 01:04:58,822 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-27 03:05:25] 2024-05-27 01:05:00,448 | INFO     | monitor loop #3163: job 0:6210074227 is in state 'finished'
[2024-05-27 03:05:25] 2024-05-27 01:05:00,449 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-27 03:05:25] 2024-05-27 01:05:02,715 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-27 03:05:25] 2024-05-27 01:05:02,715 | INFO     | using path: /scratch/boinc/var/slot64/slots/0/PanDA_Pilot-6210074227/memory_monitor_summary.json (trf name=prmon)
[2024-05-27 03:05:25] 2024-05-27 01:05:02,717 | INFO     | extracted standard info from prmon json
[2024-05-27 03:05:25] 2024-05-27 01:05:02,717 | INFO     | extracted standard memory fields from prmon json
[2024-05-27 03:05:25] 2024-05-27 01:05:02,717 | WARNING  | GPU info not found in prmon json
[2024-05-27 03:05:25] 2024-05-27 01:05:02,728 | INFO     | fitting pss+swap vs Time
[2024-05-27 03:05:25] 2024-05-27 01:05:02,729 | INFO     | model: linear, x: [1716730474.0, 1716730535.0, 1716730596.0, 1716730657.0, 1716730718.0, 1716730779.0, 1716730840.0, 1716730901.0, 1716730962.0, 1716731023.0, 1716
[2024-05-27 03:05:25] 2024-05-27 01:05:02,730 | INFO     | sum of square deviations: 97070396780.0
[2024-05-27 03:05:25] 2024-05-27 01:05:02,740 | INFO     | sum of deviations: 959258856036.9999
[2024-05-27 03:05:25] 2024-05-27 01:05:02,740 | INFO     | mean x: 1716751153.0
[2024-05-27 03:05:25] 2024-05-27 01:05:02,740 | INFO     | mean y: 2608079.0117820324
[2024-05-27 03:05:25] 2024-05-27 01:05:02,741 | INFO     | -- intersect: -16962489435.313847
[2024-05-27 03:05:25] 2024-05-27 01:05:02,741 | INFO     | intersect: -16962489435.313847
[2024-05-27 03:05:25] 2024-05-27 01:05:02,742 | INFO     | chi2: 13.197317849168593
[2024-05-27 03:05:25] 2024-05-27 01:05:02,743 | INFO     | model: linear, x: [1716730474.0, 1716730535.0, 1716730596.0, 1716730657.0, 1716730718.0, 1716730779.0, 1716730840.0, 1716730901.0, 1716730962.0, 1716731023.0, 1716
[2024-05-27 03:05:25] 2024-05-27 01:05:02,743 | INFO     | sum of square deviations: 94941733612.5
[2024-05-27 03:05:25] 2024-05-27 01:05:02,753 | INFO     | sum of deviations: 1154201767541.5002
[2024-05-27 03:05:25] 2024-05-27 01:05:02,753 | INFO     | mean x: 1716751000.5
[2024-05-27 03:05:25] 2024-05-27 01:05:02,753 | INFO     | mean y: 2622047.799703264
[2024-05-27 03:05:25] 2024-05-27 01:05:02,754 | INFO     | -- intersect: -20867831479.97176
[2024-05-27 03:05:25] 2024-05-27 01:05:02,754 | INFO     | intersect: -20867831479.97176
[2024-05-27 03:05:25] 2024-05-27 01:05:02,754 | INFO     | chi2: 10.460330580084792
[2024-05-27 03:05:25] 2024-05-27 01:05:02,754 | INFO     | current chi2=10.460330580084792 (change=20.7389660563205 %)
[2024-05-27 03:05:25] 2024-05-27 01:05:02,755 | INFO     | right removable region: 673
[2024-05-27 03:05:25] 2024-05-27 01:05:02,755 | INFO     | model: linear, x: [1716730779.0, 1716730840.0, 1716730901.0, 1716730962.0, 1716731023.0, 1716731084.0, 1716731145.0, 1716731206.0, 1716731267.0, 1716731328.0, 1716
[2024-05-27 03:05:25] 2024-05-27 01:05:02,755 | INFO     | sum of square deviations: 94941733612.5
[2024-05-27 03:05:25] 2024-05-27 01:05:02,764 | INFO     | sum of deviations: 756113171442.4999
[2024-05-27 03:05:25] 2024-05-27 01:05:02,764 | INFO     | mean x: 1716751305.5
[2024-05-27 03:05:25] 2024-05-27 01:05:02,764 | INFO     | mean y: 2622623.8679525224
[2024-05-27 03:05:25] 2024-05-27 01:05:02,764 | INFO     | -- intersect: -13669534232.648043
[2024-05-27 03:05:25] 2024-05-27 01:05:02,764 | INFO     | intersect: -13669534232.648043
[2024-05-27 03:05:25] 2024-05-27 01:05:02,765 | INFO     | chi2: 10.206093084883294
[2024-05-27 03:05:25] 2024-05-27 01:05:02,765 | INFO     | current chi2=10.206093084883294 (change=22.66539912482096 %)
[2024-05-27 03:05:25] 2024-05-27 01:05:02,765 | INFO     | left removable region: 10
[2024-05-27 03:05:25] 2024-05-27 01:05:02,766 | INFO     | model: linear, x: [1716731084.0, 1716731145.0, 1716731206.0, 1716731267.0, 1716731328.0, 1716731389.0, 1716731450.0, 1716731511.0, 1716731572.0, 1716731633.0, 1716
[2024-05-27 03:05:25] 2024-05-27 01:05:02,766 | INFO     | sum of square deviations: 90368697172.0
[2024-05-27 03:05:25] 2024-05-27 01:05:02,774 | INFO     | sum of deviations: 835220523224.9995
[2024-05-27 03:05:25] 2024-05-27 01:05:02,775 | INFO     | mean x: 1716751275.0
[2024-05-27 03:05:25] 2024-05-27 01:05:02,775 | INFO     | mean y: 2652906.763197587
[2024-05-27 03:05:25] 2024-05-27 01:05:02,775 | INFO     | -- intersect: -15864189739.242733
[2024-05-27 03:05:25] 2024-05-27 01:05:02,775 | INFO     | intersect: -15864189739.242733
[2024-05-27 03:05:25] 2024-05-27 01:05:02,775 | INFO     | chi2: 4.66058547935121
[2024-05-27 03:05:25] 2024-05-27 01:05:02,776 | INFO     | -- intersect: -15864189739.242733
[2024-05-27 03:05:25] 2024-05-27 01:05:02,776 | INFO     | current memory leak: 9.24 B/s (using 663 data points, chi2=4.66)
[2024-05-27 03:05:25] 2024-05-27 01:05:02,776 | INFO     | ..............................
[2024-05-27 03:05:25] 2024-05-27 01:05:02,776 | INFO     | . Timing measurements:
[2024-05-27 03:05:25] 2024-05-27 01:05:02,776 | INFO     | . get job = 0 s
[2024-05-27 03:05:25] 2024-05-27 01:05:02,776 | INFO     | . initial setup = 1 s
[2024-05-27 03:05:25] 2024-05-27 01:05:02,777 | INFO     | . payload setup = 8 s
[2024-05-27 03:05:25] 2024-05-27 01:05:02,777 | INFO     | . stage-in = 0 s
[2024-05-27 03:05:25] 2024-05-27 01:05:02,777 | INFO     | . payload execution = 41423 s
[2024-05-27 03:05:25] 2024-05-27 01:05:02,777 | INFO     | . stage-out = 2 s
[2024-05-27 03:05:25] 2024-05-27 01:05:02,777 | INFO     | . log creation = 0 s
[2024-05-27 03:05:25] 2024-05-27 01:05:02,777 | INFO     | ..............................
[2024-05-27 03:05:25] 2024-05-27 01:05:02,855 | INFO     | 
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | job summary report
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | --------------------------------------------------
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | PanDA job id: 6210074227
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | task id: 38734053
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | errors: (none)
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | pilot state: finished 
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | transexitcode: 0
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | exeerrorcode: 0
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | exeerrordiag: 
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | exitcode: 0
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | exitmsg: OK
[2024-05-27 03:05:25] 2024-05-27 01:05:02,856 | INFO     | cpuconsumptiontime: 159631 s
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | nevents: 1850
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | neventsw: 0
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | pid: 3405584
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | pgrp: 3405584
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | corecount: 4
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | event service: False
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | sizes: {0: 2379177, 4: 2379383, 11: 2379411, 41436: 2442969, 41439: 2452007, 41443: 2452173}
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | --------------------------------------------------
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | 
[2024-05-27 03:05:25] 2024-05-27 01:05:02,857 | INFO     | executing command: ls -lF /scratch/boinc/var/slot64/slots/0
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,877 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,878 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,878 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-27 03:05:25] 2024-05-27 01:05:02,878 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,878 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-27 03:05:25] 2024-05-27 01:05:02,878 | INFO     | job 6210074227 has completed (purged errors)
[2024-05-27 03:05:25] 2024-05-27 01:05:02,878 | INFO     | overall cleanup function is called
[2024-05-27 03:05:25] 2024-05-27 01:05:03,889 | INFO     | --- collectZombieJob: --- 10, [3405584]
[2024-05-27 03:05:25] 2024-05-27 01:05:03,889 | INFO     | zombie collector waiting for pid 3405584
[2024-05-27 03:05:25] 2024-05-27 01:05:03,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-27 03:05:25] 2024-05-27 01:05:04,894 | INFO     | collected zombie processes
[2024-05-27 03:05:25] 2024-05-27 01:05:04,895 | INFO     | will now attempt to kill all subprocesses of pid=3405584
[2024-05-27 03:05:25] 2024-05-27 01:05:05,097 | INFO     | process IDs to be killed: [3405584] (in reverse order)
[2024-05-27 03:05:25] 2024-05-27 01:05:05,283 | WARNING  | found no corresponding commands to process id(s)
[2024-05-27 03:05:25] 2024-05-27 01:05:05,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-27 03:05:25] 2024-05-27 01:05:05,297 | INFO     | did not find any defunct processes belonging to 3405584
[2024-05-27 03:05:25] 2024-05-27 01:05:05,308 | INFO     | did not find any defunct processes belonging to 3405584
[2024-05-27 03:05:25] 2024-05-27 01:05:05,309 | INFO     | ready for new job
[2024-05-27 03:05:25] 2024-05-27 01:05:05,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-27 03:05:25] 2024-05-27 01:05:05,313 | INFO     | *************************************
[2024-05-27 03:05:25] 2024-05-27 01:05:05,314 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-27 03:05:25] 2024-05-27 01:05:05,314 | INFO     | *************************************
[2024-05-27 03:05:25] 2024-05-27 01:05:05,314 | INFO     | 
[2024-05-27 03:05:25] 2024-05-27 01:05:05,323 | INFO     | architecture information:
[2024-05-27 03:05:25] 2024-05-27 01:05:05,324 | INFO     | executing command: cat /etc/os-release
[2024-05-27 03:05:25] 2024-05-27 01:05:05,340 | INFO     | cat /etc/os-release:
[2024-05-27 03:05:25] NAME="CentOS Linux"
[2024-05-27 03:05:25] VERSION="7 (Core)"
[2024-05-27 03:05:25] ID="centos"
[2024-05-27 03:05:25] ID_LIKE="rhel fedora"
[2024-05-27 03:05:25] VERSION_ID="7"
[2024-05-27 03:05:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-27 03:05:25] ANSI_COLOR="0;31"
[2024-05-27 03:05:25] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-27 03:05:25] HOME_URL="https://www.centos.org/"
[2024-05-27 03:05:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-27 03:05:25] 
[2024-05-27 03:05:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-27 03:05:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-27 03:05:25] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-27 03:05:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-27 03:05:25] 
[2024-05-27 03:05:25] 2024-05-27 01:05:05,341 | INFO     | *************************************
[2024-05-27 03:05:25] 2024-05-27 01:05:05,843 | INFO     | executing command: df -mP /scratch/boinc/var/slot64/slots/0
[2024-05-27 03:05:25] 2024-05-27 01:05:05,863 | INFO     | sufficient remaining disk space (3228073721856 B)
[2024-05-27 03:05:25] 2024-05-27 01:05:05,864 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-27 03:05:25] 2024-05-27 01:05:05,864 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-27 03:05:25] 2024-05-27 01:05:05,864 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-27 03:05:25] 2024-05-27 01:05:05,865 | INFO     | found 0 job(s) in 20 queues
[2024-05-27 03:05:25] 2024-05-27 01:05:05,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-27 03:05:25] 2024-05-27 01:05:05,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-27 03:05:25] 2024-05-27 01:05:06,387 | INFO     | all data control threads have been joined
[2024-05-27 03:05:25] 2024-05-27 01:05:06,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-27 03:05:25] 2024-05-27 01:05:06,465 | INFO     | aborting loop
[2024-05-27 03:05:25] 2024-05-27 01:05:06,656 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-27 03:05:25] 2024-05-27 01:05:06,670 | INFO     | all payload control threads have been joined
[2024-05-27 03:05:25] 2024-05-27 01:05:06,869 | INFO     | [job] retrieve thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:06,891 | INFO     | [payload] failed_post thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:07,079 | INFO     | [payload] validate_post thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:07,316 | INFO     | [payload] execute_payloads thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:07,392 | INFO     | [data] control thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:07,470 | INFO     | [job] job monitor thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:07,518 | INFO     | all job control threads have been joined
[2024-05-27 03:05:25] 2024-05-27 01:05:07,625 | INFO     | [payload] validate_pre thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:07,674 | INFO     | [payload] control thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:07,693 | INFO     | [job] validate thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:07,696 | INFO     | [data] copytool_in thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:07,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-27 03:05:25] 2024-05-27 01:05:08,360 | INFO     | [job] create_data_payload thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:08,524 | INFO     | [job] control thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:08,661 | INFO     | [data] copytool_out thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:08,871 | INFO     | [job] queue monitor thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:09,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-27 03:05:25] 2024-05-27 01:05:13,228 | INFO     | [data] queue_monitor thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:16,593 | INFO     | job.realtimelogging is not enabled
[2024-05-27 03:05:25] 2024-05-27 01:05:17,598 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-27 03:05:25] 2024-05-27 01:05:19,571 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47733684192320)>', '<ExcThread(monitor, started 47733857543936)>']
[2024-05-27 03:05:25] 2024-05-27 01:05:19,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-27 03:05:25] 2024-05-27 01:05:19,932 | INFO     | [monitor] control thread has ended
[2024-05-27 03:05:25] 2024-05-27 01:05:24,581 | INFO     | all workflow threads have been joined
[2024-05-27 03:05:25] 2024-05-27 01:05:24,581 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-27 03:05:25] 2024-05-27 01:05:24,582 | INFO     | traces error code: 0
[2024-05-27 03:05:25] 2024-05-27 01:05:24,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-27 03:05:25] 2024-05-27 01:05:24,653 [wrapper] ==== pilot stdout END ====
[2024-05-27 03:05:25] 2024-05-27 01:05:24,655 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-27 03:05:25] 2024-05-27 01:05:24,656 [wrapper] pilotpid: 3397310
[2024-05-27 03:05:25] 2024-05-27 01:05:24,657 [wrapper] Pilot exit status: 0
[2024-05-27 03:05:25] 2024-05-27 01:05:24,665 [wrapper] pandaids: 6210074227
[2024-05-27 03:05:25] 2024-05-27 01:05:24,783 [wrapper] cleanup: SIGTERM to supervisor_pilot 1694866 3397311
[2024-05-27 03:05:25] 2024-05-27 01:05:24,786 [wrapper] Test setup, not cleaning
[2024-05-27 03:05:25] 2024-05-27 01:05:24,788 [wrapper] ==== wrapper stdout END ====
[2024-05-27 03:05:25] 2024-05-27 01:05:24,790 [wrapper] ==== wrapper stderr END ====
[2024-05-27 03:05:25] 2024-05-27 01:05:24,795 [wrapper] apfmon messages muted
[2024-05-27 03:05:25]  *** Error codes and diagnostics ***
[2024-05-27 03:05:25]     "exeErrorCode": 0,
[2024-05-27 03:05:25]     "exeErrorDiag": "",
[2024-05-27 03:05:25]     "pilotErrorCode": 0,
[2024-05-27 03:05:25]     "pilotErrorDiag": "",
[2024-05-27 03:05:25]  *** Listing of results directory ***
[2024-05-27 03:05:25] total 1454340
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc       5633 May 20 01:09 queuedata.json
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc     467845 May 20 01:09 pilot3.tar.gz
[2024-05-27 03:05:25] -rwx------ 1 boinc boinc      32251 May 20 01:09 runpilot2-wrapper.sh
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc        100 May 26 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-27 03:05:25] -rwxr-xr-x 1 boinc boinc       7986 May 26 15:33 run_atlas
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc        105 May 26 15:33 job.xml
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc       6644 May 26 15:33 init_data.xml
[2024-05-27 03:05:25] -rw-r--r-- 2 boinc boinc  328508785 May 26 15:33 EVNT.38734051._000310.pool.root.1
[2024-05-27 03:05:25] -rw-r--r-- 2 boinc boinc      17537 May 26 15:33 start_atlas.sh
[2024-05-27 03:05:25] drwxrwx--x 2 boinc boinc       4096 May 26 15:33 shared
[2024-05-27 03:05:25] -rw-r--r-- 2 boinc boinc     480159 May 26 15:33 input.tar.gz
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc          0 May 26 15:33 boinc_lockfile
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc       2852 May 26 15:33 pandaJob.out
[2024-05-27 03:05:25] -rw------- 1 boinc boinc        424 May 26 15:33 setup.sh.local
[2024-05-27 03:05:25] -rw------- 1 boinc boinc    1010165 May 26 15:34 agis_schedconf.cvmfs.json
[2024-05-27 03:05:25] -rw------- 1 boinc boinc    1317222 May 26 15:34 cric_ddmendpoints.json
[2024-05-27 03:05:25] drwx------ 4 boinc boinc       4096 May 26 15:34 pilot3
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc        532 May 27 02:58 boinc_task_state.xml
[2024-05-27 03:05:25] -rw------- 1 boinc boinc 1142393682 May 27 03:04 HITS.38734053._009330.pool.root.1
[2024-05-27 03:05:25] -rw------- 1 boinc boinc         95 May 27 03:04 pilot_heartbeat.json
[2024-05-27 03:05:25] -rw------- 1 boinc boinc       1053 May 27 03:04 memory_monitor_summary.json
[2024-05-27 03:05:25] -rw------- 1 boinc boinc          0 May 27 03:04 agis_ddmendpoints.agis.ALL.json
[2024-05-27 03:05:25] -rw------- 1 boinc boinc    1621588 May 27 03:04 log.38734053._009330.job.log.tgz.1
[2024-05-27 03:05:25] -rw------- 1 boinc boinc      27897 May 27 03:05 heartbeat.json
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc       8192 May 27 03:05 boinc_mmap_file
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc         29 May 27 03:05 wrapper_checkpoint.txt
[2024-05-27 03:05:25] -rw------- 1 boinc boinc       4417 May 27 03:05 pilotlog.txt
[2024-05-27 03:05:25] -rw------- 1 boinc boinc    5769570 May 27 03:05 log.38734053._009330.job.log.1
[2024-05-27 03:05:25] -rw------- 1 boinc boinc        353 May 27 03:05 output.list
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc        620 May 27 03:05 runtime_log
[2024-05-27 03:05:25] -rw------- 1 boinc boinc    7434240 May 27 03:05 result.tar.gz
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc      11410 May 27 03:05 runtime_log.err
[2024-05-27 03:05:25] -rw------- 1 boinc boinc        664 May 27 03:05 32oKDmnp4S5nsSi4apGgGQJmABFKDmABFKDm4ySLDmZ0UKDmAA5xKm.diag
[2024-05-27 03:05:25] -rw-r--r-- 1 boinc boinc      21651 May 27 03:05 stderr.txt
[2024-05-27 03:05:25] HITS file was successfully produced:
[2024-05-27 03:05:25] -rw------- 1 boinc boinc 1142393682 May 27 03:04 shared/HITS.pool.root.1
[2024-05-27 03:05:25]  *** Contents of shared directory: ***
[2024-05-27 03:05:25] total 1444192
[2024-05-27 03:05:25] -rw-r--r-- 2 boinc boinc  328508785 May 26 15:33 ATLAS.root_0
[2024-05-27 03:05:25] -rw-r--r-- 2 boinc boinc      17537 May 26 15:33 start_atlas.sh
[2024-05-27 03:05:25] -rw-r--r-- 2 boinc boinc     480159 May 26 15:33 input.tar.gz
[2024-05-27 03:05:25] -rw------- 1 boinc boinc 1142393682 May 27 03:04 HITS.pool.root.1
[2024-05-27 03:05:25] -rw------- 1 boinc boinc    7434240 May 27 03:05 result.tar.gz
03:05:27 (3392704): run_atlas exited; CPU time 158555.918508
03:05:27 (3392704): called boinc_finish(0)

</stderr_txt>
]]>

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