Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:49:32 (84063): wrapper (7.7.26015): starting
13:49:32 (84063): wrapper: running run_atlas (--nthreads 4)
[2024-05-26 13:49:32] Arguments: --nthreads 4
[2024-05-26 13:49:32] Threads: 4
[2024-05-26 13:49:32] Checking for CVMFS
[2024-05-26 13:49:32] No cvmfs_config command found, will try listing directly
[2024-05-26 13:49:32] CVMFS is ok
[2024-05-26 13:49:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-26 13:49:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-26 13:49:32] Further information can be found at the LHC@home message board.
[2024-05-26 13:49:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-26 13:49:32] Checking for apptainer binary...
[2024-05-26 13:49:32] which: no apptainer in ((null))
[2024-05-26 13:49:32] apptainer is not installed, using version from CVMFS
[2024-05-26 13:49:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-26 13:49:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2024-05-26 13:49:33] apptainer works
[2024-05-26 13:49:33] Set ATHENA_PROC_NUMBER=4
[2024-05-26 13:49:33] Set ATHENA_CORE_NUMBER=4
[2024-05-26 13:49:33] Starting ATLAS job with PandaID=6209893296
[2024-05-26 13:49:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-26 16:14:30]  *** The last 200 lines of the pilot log: ***
[2024-05-26 16:14:30]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-26 16:14:30]  direct_access_lan=False
[2024-05-26 16:14:30]  direct_access_wan=False
[2024-05-26 16:14:30]  domain=
[2024-05-26 16:14:30]  filesize=282257
[2024-05-26 16:14:30]  filetype=log
[2024-05-26 16:14:30]  guid=7bc0331b-64b8-4537-86a4-c81b3a863786
[2024-05-26 16:14:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-26 16:14:30]  is_tar=False
[2024-05-26 16:14:30]  lfn=log.38776104._023808.job.log.tgz.1
[2024-05-26 16:14:30]  mtime=0
[2024-05-26 16:14:30]  protocol_id=None
[2024-05-26 16:14:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-26 16:14:30]  replicas=None
[2024-05-26 16:14:30]  scope=mc23_13p6TeV
[2024-05-26 16:14:30]  status=None
[2024-05-26 16:14:30]  status_code=0
[2024-05-26 16:14:30]  storage_token=
[2024-05-26 16:14:30]  surl=/scratch/boinc/var/slot48/slots/1/PanDA_Pilot-6209893296/log.38776104._023808.job.log.tgz.1
[2024-05-26 16:14:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/0f/log.38776104._023808.job.log.tgz.1
[2024-05-26 16:14:30]  workdir=None
[2024-05-26 16:14:30] ]
[2024-05-26 16:14:30] 2024-05-26 14:14:02,040 | INFO     | transferring file log.38776104._023808.job.log.tgz.1 from /scratch/boinc/var/slot48/slots/1/PanDA_Pilot-6209893296/log.38776104._023808.job.log.tgz.1 to /scratch/b
[2024-05-26 16:14:30] 2024-05-26 14:14:02,041 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot48/slots/1/PanDA_Pilot-6209893296/log.38776104._023808.job.log.tgz.1 /scratch/boinc/var/slot48/slots/1/lo
[2024-05-26 16:14:30] 2024-05-26 14:14:02,055 | INFO     | adding to output.list: log.38776104._023808.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/0f/log.38776104._023808.job.log.tg
[2024-05-26 16:14:30] 2024-05-26 14:14:02,056 | INFO     | summary of transferred files:
[2024-05-26 16:14:30] 2024-05-26 14:14:02,056 | INFO     |  -- lfn=log.38776104._023808.job.log.tgz.1, status_code=0, status=transferred
[2024-05-26 16:14:30] 2024-05-26 14:14:02,056 | INFO     | stage-out finished correctly
[2024-05-26 16:14:30] 2024-05-26 14:14:05,088 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-26 16:14:30] 2024-05-26 14:14:05,151 | INFO     | job 6209893296 has state=finished
[2024-05-26 16:14:30] 2024-05-26 14:14:05,151 | INFO     | preparing for final server update for job 6209893296 in state='finished'
[2024-05-26 16:14:30] 2024-05-26 14:14:05,152 | INFO     | this job has now completed (state=finished)
[2024-05-26 16:14:30] 2024-05-26 14:14:05,152 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-26 16:14:30] 2024-05-26 14:14:05,152 | INFO     | job 6209893296 has finished - writing final server update
[2024-05-26 16:14:30] 2024-05-26 14:14:05,153 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3245315/.job.ad'
[2024-05-26 16:14:30] 2024-05-26 14:14:05,153 | INFO     | total number of processed events: 400 (read)
[2024-05-26 16:14:30] 2024-05-26 14:14:05,158 | INFO     | executing command: lscpu
[2024-05-26 16:14:30] 2024-05-26 14:14:05,201 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-05-26 16:14:30] 2024-05-26 14:14:05,201 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-26 16:14:30] 2024-05-26 14:14:05,236 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-26 16:14:30] 2024-05-26 14:14:06,037 | INFO     | 8664s have passed since pilot start
[2024-05-26 16:14:30] 2024-05-26 14:14:08,853 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-26 16:14:30] 2024-05-26 14:14:08,854 | INFO     | using path: /scratch/boinc/var/slot48/slots/1/PanDA_Pilot-6209893296/memory_monitor_summary.json (trf name=prmon)
[2024-05-26 16:14:30] 2024-05-26 14:14:08,860 | INFO     | extracted standard info from prmon json
[2024-05-26 16:14:30] 2024-05-26 14:14:08,860 | INFO     | extracted standard memory fields from prmon json
[2024-05-26 16:14:30] 2024-05-26 14:14:08,860 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-26 16:14:30] 2024-05-26 14:14:08,860 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-26 16:14:30] 2024-05-26 14:14:08,864 | INFO     | fitting pss+swap vs Time
[2024-05-26 16:14:30] 2024-05-26 14:14:08,866 | INFO     | current chi2=4.145976367362079 (change=0.105942580834915 %)
[2024-05-26 16:14:30] 2024-05-26 14:14:08,866 | INFO     | right removable region: 136
[2024-05-26 16:14:30] 2024-05-26 14:14:08,867 | INFO     | current chi2=1.587989568253606 (change=61.73863354337175 %)
[2024-05-26 16:14:30] 2024-05-26 14:14:08,868 | INFO     | current chi2=0.04790414565125912 (change=96.98334632613853 %)
[2024-05-26 16:14:30] 2024-05-26 14:14:08,869 | INFO     | current chi2=0.0012607593192186868 (change=97.36816239580395 %)
[2024-05-26 16:14:30] 2024-05-26 14:14:08,870 | INFO     | current chi2=0.0010502317564225663 (change=16.698473656858464 %)
[2024-05-26 16:14:30] 2024-05-26 14:14:08,870 | INFO     | left removable region: 40
[2024-05-26 16:14:30] 2024-05-26 14:14:08,871 | INFO     | current memory leak: 4.76 B/s (using 96 data points, chi2=0.00)
[2024-05-26 16:14:30] 2024-05-26 14:14:08,871 | INFO     | ..............................
[2024-05-26 16:14:30] 2024-05-26 14:14:08,871 | INFO     | . Timing measurements:
[2024-05-26 16:14:30] 2024-05-26 14:14:08,871 | INFO     | . get job = 0 s
[2024-05-26 16:14:30] 2024-05-26 14:14:08,872 | INFO     | . initial setup = 1 s
[2024-05-26 16:14:30] 2024-05-26 14:14:08,872 | INFO     | . payload setup = 5 s
[2024-05-26 16:14:30] 2024-05-26 14:14:08,872 | INFO     | . stage-in = 0 s
[2024-05-26 16:14:30] 2024-05-26 14:14:08,872 | INFO     | . payload execution = 8634 s
[2024-05-26 16:14:30] 2024-05-26 14:14:08,872 | INFO     | . stage-out = 0 s
[2024-05-26 16:14:30] 2024-05-26 14:14:08,872 | INFO     | . log creation = 0 s
[2024-05-26 16:14:30] 2024-05-26 14:14:08,872 | INFO     | ..............................
[2024-05-26 16:14:30] 2024-05-26 14:14:08,986 | INFO     | 
[2024-05-26 16:14:30] 2024-05-26 14:14:08,986 | INFO     | job summary report
[2024-05-26 16:14:30] 2024-05-26 14:14:08,986 | INFO     | --------------------------------------------------
[2024-05-26 16:14:30] 2024-05-26 14:14:08,986 | INFO     | PanDA job id: 6209893296
[2024-05-26 16:14:30] 2024-05-26 14:14:08,986 | INFO     | task id: 38776104
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | errors: (none)
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | pilot state: finished 
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | transexitcode: 0
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | exeerrorcode: 0
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | exeerrordiag: 
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | exitcode: 0
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | exitmsg: OK
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | cpuconsumptiontime: 31783 s
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | nevents: 400
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | neventsw: 0
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | pid: 97019
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | pgrp: 97019
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | corecount: 4
[2024-05-26 16:14:30] 2024-05-26 14:14:08,987 | INFO     | event service: False
[2024-05-26 16:14:30] 2024-05-26 14:14:08,988 | INFO     | sizes: {0: 2377174, 1: 2378721, 5: 2378927, 12: 2378983, 8643: 2407068, 8644: 2416050, 8647: 2416234, 8651: 2416404}
[2024-05-26 16:14:30] 2024-05-26 14:14:08,988 | INFO     | --------------------------------------------------
[2024-05-26 16:14:30] 2024-05-26 14:14:08,988 | INFO     | 
[2024-05-26 16:14:30] 2024-05-26 14:14:08,988 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/1
[2024-05-26 16:14:30] 2024-05-26 14:14:09,055 | WARNING  | process 97019 is no longer using CPU - aborting
[2024-05-26 16:14:30] 2024-05-26 14:14:09,058 | INFO     | aborting job monitoring since job object (job id=6209893296) has expired
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | job 6209893296 has completed (purged errors)
[2024-05-26 16:14:30] 2024-05-26 14:14:09,076 | INFO     | overall cleanup function is called
[2024-05-26 16:14:30] 2024-05-26 14:14:10,083 | INFO     | --- collectZombieJob: --- 10, [97019]
[2024-05-26 16:14:30] 2024-05-26 14:14:10,083 | INFO     | zombie collector waiting for pid 97019
[2024-05-26 16:14:30] 2024-05-26 14:14:10,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-26 16:14:30] 2024-05-26 14:14:11,088 | INFO     | collected zombie processes
[2024-05-26 16:14:30] 2024-05-26 14:14:11,088 | INFO     | will now attempt to kill all subprocesses of pid=97019
[2024-05-26 16:14:30] 2024-05-26 14:14:11,284 | INFO     | process IDs to be killed: [97019] (in reverse order)
[2024-05-26 16:14:30] 2024-05-26 14:14:11,422 | WARNING  | found no corresponding commands to process id(s)
[2024-05-26 16:14:30] 2024-05-26 14:14:11,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-26 16:14:30] 2024-05-26 14:14:11,436 | INFO     | did not find any defunct processes belonging to 97019
[2024-05-26 16:14:30] 2024-05-26 14:14:11,445 | INFO     | did not find any defunct processes belonging to 97019
[2024-05-26 16:14:30] 2024-05-26 14:14:11,446 | INFO     | ready for new job
[2024-05-26 16:14:30] 2024-05-26 14:14:11,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-26 16:14:30] 2024-05-26 14:14:11,447 | INFO     | *************************************
[2024-05-26 16:14:30] 2024-05-26 14:14:11,447 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-05-26 16:14:30] 2024-05-26 14:14:11,447 | INFO     | *************************************
[2024-05-26 16:14:30] 2024-05-26 14:14:11,447 | INFO     | 
[2024-05-26 16:14:30] 2024-05-26 14:14:11,452 | INFO     | architecture information:
[2024-05-26 16:14:30] 2024-05-26 14:14:11,452 | INFO     | executing command: cat /etc/os-release
[2024-05-26 16:14:30] 2024-05-26 14:14:11,467 | INFO     | cat /etc/os-release:
[2024-05-26 16:14:30] NAME="CentOS Linux"
[2024-05-26 16:14:30] VERSION="7 (Core)"
[2024-05-26 16:14:30] ID="centos"
[2024-05-26 16:14:30] ID_LIKE="rhel fedora"
[2024-05-26 16:14:30] VERSION_ID="7"
[2024-05-26 16:14:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-26 16:14:30] ANSI_COLOR="0;31"
[2024-05-26 16:14:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-26 16:14:30] HOME_URL="https://www.centos.org/"
[2024-05-26 16:14:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-26 16:14:30] 
[2024-05-26 16:14:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-26 16:14:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-26 16:14:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-26 16:14:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-26 16:14:30] 
[2024-05-26 16:14:30] 2024-05-26 14:14:11,468 | INFO     | *************************************
[2024-05-26 16:14:30] 2024-05-26 14:14:11,971 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/1
[2024-05-26 16:14:30] 2024-05-26 14:14:11,992 | INFO     | sufficient remaining disk space (3176556134400 B)
[2024-05-26 16:14:30] 2024-05-26 14:14:11,993 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-26 16:14:30] 2024-05-26 14:14:11,993 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-26 16:14:30] 2024-05-26 14:14:11,993 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-26 16:14:30] 2024-05-26 14:14:11,994 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-26 16:14:30] 2024-05-26 14:14:11,994 | INFO     | found 0 job(s) in 20 queues
[2024-05-26 16:14:30] 2024-05-26 14:14:11,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-26 16:14:30] 2024-05-26 14:14:11,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-26 16:14:30] 2024-05-26 14:14:12,092 | INFO     | all data control threads have been joined
[2024-05-26 16:14:30] 2024-05-26 14:14:12,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-26 16:14:30] 2024-05-26 14:14:12,567 | INFO     | aborting loop
[2024-05-26 16:14:30] 2024-05-26 14:14:12,646 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-26 16:14:30] 2024-05-26 14:14:12,999 | INFO     | [job] retrieve thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:13,028 | INFO     | all payload control threads have been joined
[2024-05-26 16:14:30] 2024-05-26 14:14:13,097 | INFO     | [data] control thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:13,169 | INFO     | [job] create_data_payload thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:13,401 | INFO     | [payload] validate_post thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:13,415 | INFO     | [payload] validate_pre thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:13,543 | INFO     | all job control threads have been joined
[2024-05-26 16:14:30] 2024-05-26 14:14:13,573 | INFO     | [job] job monitor thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:13,976 | INFO     | [payload] failed_post thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:13,992 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-26 16:14:30] 2024-05-26 14:14:14,034 | INFO     | [payload] control thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:14,139 | INFO     | [payload] execute_payloads thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:14,161 | INFO     | [data] copytool_in thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:14,233 | INFO     | [job] validate thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:14,548 | INFO     | [job] control thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:14,652 | INFO     | [data] copytool_out thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:14,996 | INFO     | [job] queue monitor thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:16,000 | INFO     | [data] queue_monitor thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:22,290 | INFO     | job.realtimelogging is not enabled
[2024-05-26 16:14:30] 2024-05-26 14:14:23,295 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-26 16:14:30] 2024-05-26 14:14:24,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47237004133440)>', '<ExcThread(monitor, started 47237171164928)>']
[2024-05-26 16:14:30] 2024-05-26 14:14:25,058 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-26 16:14:30] 2024-05-26 14:14:25,059 | INFO     | [monitor] control thread has ended
[2024-05-26 16:14:30] 2024-05-26 14:14:29,825 | INFO     | all workflow threads have been joined
[2024-05-26 16:14:30] 2024-05-26 14:14:29,825 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-26 16:14:30] 2024-05-26 14:14:29,825 | INFO     | traces error code: 0
[2024-05-26 16:14:30] 2024-05-26 14:14:29,825 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-26 16:14:30] 2024-05-26 14:14:29,890 [wrapper] ==== pilot stdout END ====
[2024-05-26 16:14:30] 2024-05-26 14:14:29,892 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-26 16:14:30] 2024-05-26 14:14:29,894 [wrapper] pilotpid: 88723
[2024-05-26 16:14:30] 2024-05-26 14:14:29,895 [wrapper] Pilot exit status: 0
[2024-05-26 16:14:30] 2024-05-26 14:14:29,904 [wrapper] pandaids: 6209893296
[2024-05-26 16:14:30] 2024-05-26 14:14:29,986 [wrapper] cleanup: SIGTERM to supervisor_pilot  748920 88724
[2024-05-26 16:14:30] 2024-05-26 14:14:29,989 [wrapper] Test setup, not cleaning
[2024-05-26 16:14:30] 2024-05-26 14:14:29,992 [wrapper] ==== wrapper stdout END ====
[2024-05-26 16:14:30] 2024-05-26 14:14:29,994 [wrapper] ==== wrapper stderr END ====
[2024-05-26 16:14:30] 2024-05-26 14:14:30,000 [wrapper] apfmon messages muted
[2024-05-26 16:14:30]  *** Error codes and diagnostics ***
[2024-05-26 16:14:30]     "exeErrorCode": 0,
[2024-05-26 16:14:30]     "exeErrorDiag": "",
[2024-05-26 16:14:30]     "pilotErrorCode": 0,
[2024-05-26 16:14:30]     "pilotErrorDiag": "",
[2024-05-26 16:14:30]  *** Listing of results directory ***
[2024-05-26 16:14:30] total 825316
[2024-05-26 16:14:30] -rwx------ 1 boinc boinc     32251 May 19 21:37 runpilot2-wrapper.sh
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc      5633 May 19 21:37 queuedata.json
[2024-05-26 16:14:30] -rw------- 1 boinc boinc    468593 May 19 21:37 pilot3.tar.gz
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc       100 May 26 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-26 16:14:30] -rwxr-xr-x 1 boinc boinc      7986 May 26 13:49 run_atlas
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc       105 May 26 13:49 job.xml
[2024-05-26 16:14:30] -rw-r--r-- 2 boinc boinc 603612918 May 26 13:49 EVNT.38776100._000747.pool.root.1
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc      6644 May 26 13:49 init_data.xml
[2024-05-26 16:14:30] drwxrwx--x 2 boinc boinc      4096 May 26 13:49 shared
[2024-05-26 16:14:30] -rw-r--r-- 2 boinc boinc    481391 May 26 13:49 input.tar.gz
[2024-05-26 16:14:30] -rw-r--r-- 2 boinc boinc     17537 May 26 13:49 start_atlas.sh
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc         0 May 26 13:49 boinc_lockfile
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc      2644 May 26 13:49 pandaJob.out
[2024-05-26 16:14:30] -rw------- 1 boinc boinc       424 May 26 13:49 setup.sh.local
[2024-05-26 16:14:30] -rw------- 1 boinc boinc   1010157 May 26 13:49 agis_schedconf.cvmfs.json
[2024-05-26 16:14:30] -rw------- 1 boinc boinc         0 May 26 13:49 agis_ddmendpoints.agis.ALL.json
[2024-05-26 16:14:30] -rw------- 1 boinc boinc   1317222 May 26 13:49 cric_ddmendpoints.json
[2024-05-26 16:14:30] drwx------ 6 boinc boinc      4096 May 26 13:49 pilot3
[2024-05-26 16:14:30] -rw------- 1 boinc boinc 235777903 May 26 16:13 HITS.38776104._023808.pool.root.1
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc       531 May 26 16:13 boinc_task_state.xml
[2024-05-26 16:14:30] -rw------- 1 boinc boinc      1038 May 26 16:13 memory_monitor_summary.json
[2024-05-26 16:14:30] -rw------- 1 boinc boinc    282257 May 26 16:14 log.38776104._023808.job.log.tgz.1
[2024-05-26 16:14:30] -rw------- 1 boinc boinc        95 May 26 16:14 pilot_heartbeat.json
[2024-05-26 16:14:30] -rw------- 1 boinc boinc      7686 May 26 16:14 heartbeat.json
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc        27 May 26 16:14 wrapper_checkpoint.txt
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc      8192 May 26 16:14 boinc_mmap_file
[2024-05-26 16:14:30] -rw------- 1 boinc boinc      4417 May 26 16:14 pilotlog.txt
[2024-05-26 16:14:30] -rw------- 1 boinc boinc    828261 May 26 16:14 log.38776104._023808.job.log.1
[2024-05-26 16:14:30] -rw------- 1 boinc boinc       357 May 26 16:14 output.list
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc       620 May 26 16:14 runtime_log
[2024-05-26 16:14:30] -rw------- 1 boinc boinc   1126400 May 26 16:14 result.tar.gz
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc     11409 May 26 16:14 runtime_log.err
[2024-05-26 16:14:30] -rw------- 1 boinc boinc       653 May 26 16:14 EyMKDmIW1S5nsSi4apGgGQJmABFKDmABFKDm4ySLDmZkUKDmhDAkAn.diag
[2024-05-26 16:14:30] -rw-r--r-- 1 boinc boinc     20909 May 26 16:14 stderr.txt
[2024-05-26 16:14:30] HITS file was successfully produced:
[2024-05-26 16:14:30] -rw------- 1 boinc boinc 235777903 May 26 16:13 shared/HITS.pool.root.1
[2024-05-26 16:14:30]  *** Contents of shared directory: ***
[2024-05-26 16:14:30] total 821320
[2024-05-26 16:14:30] -rw-r--r-- 2 boinc boinc 603612918 May 26 13:49 ATLAS.root_0
[2024-05-26 16:14:30] -rw-r--r-- 2 boinc boinc    481391 May 26 13:49 input.tar.gz
[2024-05-26 16:14:30] -rw-r--r-- 2 boinc boinc     17537 May 26 13:49 start_atlas.sh
[2024-05-26 16:14:30] -rw------- 1 boinc boinc 235777903 May 26 16:13 HITS.pool.root.1
[2024-05-26 16:14:30] -rw------- 1 boinc boinc   1126400 May 26 16:14 result.tar.gz
16:14:32 (84063): run_atlas exited; CPU time 31580.989216
16:14:32 (84063): called boinc_finish(0)

</stderr_txt>
]]>

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