Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
11:04:52 (157093): wrapper (7.7.26015): starting
11:04:52 (157093): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 11:04:52] Arguments: --nthreads 12
[2024-05-19 11:04:52] Threads: 12
[2024-05-19 11:04:52] Checking for CVMFS
[2024-05-19 11:04:52] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 11:04:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 11:04:52] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 11:04:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 11:04:53] 2.10.1.0 213836 186692 176116 132920 2 109 29867256 45568001 11077 130560 0 1047920667 99.764 637219362 17942 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-19 11:04:53] CVMFS is ok
[2024-05-19 11:04:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 11:04:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 11:04:53] Further information can be found at the LHC@home message board.
[2024-05-19 11:04:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 11:04:53] Checking for apptainer binary...
[2024-05-19 11:04:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 11:04:53] Running /usr/bin/apptainer --version
[2024-05-19 11:04:53] apptainer version 1.1.8-1.el7
[2024-05-19 11:04:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 11:04:54] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0101.triumf.lcg
[2024-05-19 11:04:54] apptainer works
[2024-05-19 11:04:54] Set ATHENA_PROC_NUMBER=12
[2024-05-19 11:04:54] Set ATHENA_CORE_NUMBER=12
[2024-05-19 11:04:54] Starting ATLAS job with PandaID=6209572899
[2024-05-19 11:04:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 12:44:28]  *** The last 200 lines of the pilot log: ***
[2024-05-19 12:44:28]  direct_access_lan=False
[2024-05-19 12:44:28]  direct_access_wan=False
[2024-05-19 12:44:28]  domain=
[2024-05-19 12:44:28]  filesize=366287
[2024-05-19 12:44:28]  filetype=log
[2024-05-19 12:44:28]  guid=17c95c2d-b583-42eb-ab1b-45426e4fe36a
[2024-05-19 12:44:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-19 12:44:28]  is_tar=False
[2024-05-19 12:44:28]  lfn=log.38776104._022563.job.log.tgz.1
[2024-05-19 12:44:28]  mtime=0
[2024-05-19 12:44:28]  protocol_id=None
[2024-05-19 12:44:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 12:44:28]  replicas=None
[2024-05-19 12:44:28]  scope=mc23_13p6TeV
[2024-05-19 12:44:28]  status=None
[2024-05-19 12:44:28]  status_code=0
[2024-05-19 12:44:28]  storage_token=
[2024-05-19 12:44:28]  surl=/home/boinc/slots/0/PanDA_Pilot-6209572899/log.38776104._022563.job.log.tgz.1
[2024-05-19 12:44:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/c9/log.38776104._022563.job.log.tgz.1
[2024-05-19 12:44:28]  workdir=None
[2024-05-19 12:44:28] ]
[2024-05-19 12:44:28] 2024-05-19 19:43:58,666 | INFO     | transferring file log.38776104._022563.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209572899/log.38776104._022563.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-19 12:44:28] 2024-05-19 19:43:58,666 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209572899/log.38776104._022563.job.log.tgz.1 /home/boinc/slots/0/log.38776104._022563.job.log.t
[2024-05-19 12:44:28] 2024-05-19 19:43:58,694 | INFO     | adding to output.list: log.38776104._022563.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e5/c9/log.38776104._022563.job.log.tg
[2024-05-19 12:44:28] 2024-05-19 19:43:58,695 | INFO     | summary of transferred files:
[2024-05-19 12:44:28] 2024-05-19 19:43:58,695 | INFO     |  -- lfn=log.38776104._022563.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 12:44:28] 2024-05-19 19:43:58,695 | INFO     | stage-out finished correctly
[2024-05-19 12:44:28] 2024-05-19 19:43:58,797 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 12:44:28] 2024-05-19 19:43:58,931 | INFO     | job 6209572899 has state=finished
[2024-05-19 12:44:28] 2024-05-19 19:43:58,931 | INFO     | preparing for final server update for job 6209572899 in state='finished'
[2024-05-19 12:44:28] 2024-05-19 19:43:58,932 | INFO     | this job has now completed (state=finished)
[2024-05-19 12:44:28] 2024-05-19 19:43:58,932 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 12:44:28] 2024-05-19 19:43:58,932 | INFO     | job 6209572899 has finished - writing final server update
[2024-05-19 12:44:28] 2024-05-19 19:43:58,932 | INFO     | total number of processed events: 400 (read)
[2024-05-19 12:44:28] 2024-05-19 19:43:58,936 | INFO     | executing command: lscpu
[2024-05-19 12:44:28] 2024-05-19 19:43:58,979 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-19 12:44:28] 2024-05-19 19:43:58,980 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 12:44:28] 2024-05-19 19:43:59,043 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 12:44:28] 2024-05-19 19:44:06,260 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 12:44:28] 2024-05-19 19:44:06,261 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209572899/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 12:44:28] 2024-05-19 19:44:06,266 | INFO     | extracted standard info from prmon json
[2024-05-19 12:44:28] 2024-05-19 19:44:06,266 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 12:44:28] 2024-05-19 19:44:06,266 | WARNING  | GPU info not found in prmon json
[2024-05-19 12:44:28] 2024-05-19 19:44:06,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 12:44:28] 2024-05-19 19:44:06,267 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 12:44:28] 2024-05-19 19:44:06,269 | INFO     | fitting pss+swap vs Time
[2024-05-19 12:44:28] 2024-05-19 19:44:06,269 | INFO     | model: linear, x: [1716142240.0, 1716142301.0, 1716142362.0, 1716142423.0, 1716142484.0, 1716142545.0, 1716142606.0, 1716142667.0, 1716142728.0, 1716142789.0, 1716
[2024-05-19 12:44:28] 2024-05-19 19:44:06,269 | INFO     | sum of square deviations: 226045359.95555517
[2024-05-19 12:44:28] 2024-05-19 19:44:06,269 | INFO     | sum of deviations: 36466880670.66665
[2024-05-19 12:44:28] 2024-05-19 19:44:06,270 | INFO     | mean x: 1716144955.0222223
[2024-05-19 12:44:28] 2024-05-19 19:44:06,270 | INFO     | mean y: 2632616.1666666665
[2024-05-19 12:44:28] 2024-05-19 19:44:06,270 | INFO     | -- intersect: -276855309969.63495
[2024-05-19 12:44:28] 2024-05-19 19:44:06,270 | INFO     | intersect: -276855309969.63495
[2024-05-19 12:44:28] 2024-05-19 19:44:06,270 | INFO     | chi2: 3.0212191489874294
[2024-05-19 12:44:28] 2024-05-19 19:44:06,270 | INFO     | -- intersect: -276855309969.63495
[2024-05-19 12:44:28] 2024-05-19 19:44:06,270 | INFO     | current memory leak: 161.33 B/s (using 90 data points, chi2=3.02)
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | ..............................
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | . Timing measurements:
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | . get job = 0 s
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | . initial setup = 2 s
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | . payload setup = 6 s
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | . stage-in = 0 s
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | . payload execution = 5904 s
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | . stage-out = 0 s
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | . log creation = 0 s
[2024-05-19 12:44:28] 2024-05-19 19:44:06,271 | INFO     | ..............................
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | 
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | job summary report
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | --------------------------------------------------
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | PanDA job id: 6209572899
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | task id: 38776104
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | errors: (none)
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | pilot state: finished 
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | transexitcode: 0
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | exeerrorcode: 0
[2024-05-19 12:44:28] 2024-05-19 19:44:06,338 | INFO     | exeerrordiag: 
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | exitcode: 0
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | exitmsg: OK
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | cpuconsumptiontime: 35747 s
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | nevents: 400
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | neventsw: 0
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | pid: 171985
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | pgrp: 171985
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | corecount: 12
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | event service: False
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | sizes: {0: 2390649, 1: 2392182, 6: 2392388, 12: 2392416, 5914: 2419064, 5916: 2428202, 5923: 2428316}
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | --------------------------------------------------
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | 
[2024-05-19 12:44:28] 2024-05-19 19:44:06,339 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 12:44:28] 2024-05-19 19:44:06,400 | WARNING  | process 171985 is no longer using CPU - aborting
[2024-05-19 12:44:28] 2024-05-19 19:44:06,400 | INFO     | aborting job monitoring since job object (job id=6209572899) has expired
[2024-05-19 12:44:28] 2024-05-19 19:44:06,424 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,424 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,425 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 12:44:28] 2024-05-19 19:44:06,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,426 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 12:44:28] 2024-05-19 19:44:06,426 | INFO     | job 6209572899 has completed (purged errors)
[2024-05-19 12:44:28] 2024-05-19 19:44:06,426 | INFO     | overall cleanup function is called
[2024-05-19 12:44:28] 2024-05-19 19:44:07,432 | INFO     | --- collectZombieJob: --- 10, [171985]
[2024-05-19 12:44:28] 2024-05-19 19:44:07,433 | INFO     | zombie collector waiting for pid 171985
[2024-05-19 12:44:28] 2024-05-19 19:44:07,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 12:44:28] 2024-05-19 19:44:08,434 | INFO     | collected zombie processes
[2024-05-19 12:44:28] 2024-05-19 19:44:08,434 | INFO     | will now attempt to kill all subprocesses of pid=171985
[2024-05-19 12:44:28] 2024-05-19 19:44:08,605 | INFO     | process IDs to be killed: [171985] (in reverse order)
[2024-05-19 12:44:28] 2024-05-19 19:44:08,706 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 12:44:28] 2024-05-19 19:44:08,706 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 12:44:28] 2024-05-19 19:44:08,713 | INFO     | did not find any defunct processes belonging to 171985
[2024-05-19 12:44:28] 2024-05-19 19:44:08,718 | INFO     | did not find any defunct processes belonging to 171985
[2024-05-19 12:44:28] 2024-05-19 19:44:08,718 | INFO     | ready for new job
[2024-05-19 12:44:28] 2024-05-19 19:44:08,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 12:44:28] 2024-05-19 19:44:08,720 | INFO     | *************************************
[2024-05-19 12:44:28] 2024-05-19 19:44:08,720 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 12:44:28] 2024-05-19 19:44:08,720 | INFO     | *************************************
[2024-05-19 12:44:28] 2024-05-19 19:44:08,720 | INFO     | 
[2024-05-19 12:44:28] 2024-05-19 19:44:08,723 | INFO     | architecture information:
[2024-05-19 12:44:28] 2024-05-19 19:44:08,723 | INFO     | executing command: cat /etc/os-release
[2024-05-19 12:44:28] 2024-05-19 19:44:08,737 | INFO     | cat /etc/os-release:
[2024-05-19 12:44:28] NAME="CentOS Linux"
[2024-05-19 12:44:28] VERSION="7 (Core)"
[2024-05-19 12:44:28] ID="centos"
[2024-05-19 12:44:28] ID_LIKE="rhel fedora"
[2024-05-19 12:44:28] VERSION_ID="7"
[2024-05-19 12:44:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 12:44:28] ANSI_COLOR="0;31"
[2024-05-19 12:44:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 12:44:28] HOME_URL="https://www.centos.org/"
[2024-05-19 12:44:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 12:44:28] 
[2024-05-19 12:44:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 12:44:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 12:44:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 12:44:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 12:44:28] 
[2024-05-19 12:44:28] 2024-05-19 19:44:08,737 | INFO     | *************************************
[2024-05-19 12:44:28] 2024-05-19 19:44:09,240 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 12:44:28] 2024-05-19 19:44:09,263 | INFO     | sufficient remaining disk space (2025147334656 B)
[2024-05-19 12:44:28] 2024-05-19 19:44:09,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 12:44:28] 2024-05-19 19:44:09,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 12:44:28] 2024-05-19 19:44:09,263 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 12:44:28] 2024-05-19 19:44:09,264 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 12:44:28] 2024-05-19 19:44:09,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 12:44:28] 2024-05-19 19:44:09,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 12:44:28] 2024-05-19 19:44:09,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 12:44:28] 2024-05-19 19:44:09,386 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 12:44:28] 2024-05-19 19:44:09,443 | INFO     | all payload control threads have been joined
[2024-05-19 12:44:28] 2024-05-19 19:44:09,906 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 12:44:28] 2024-05-19 19:44:09,906 | INFO     | aborting loop
[2024-05-19 12:44:28] 2024-05-19 19:44:10,076 | INFO     | all job control threads have been joined
[2024-05-19 12:44:28] 2024-05-19 19:44:10,172 | INFO     | all data control threads have been joined
[2024-05-19 12:44:28] 2024-05-19 19:44:10,265 | INFO     | [job] retrieve thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:10,446 | INFO     | [payload] control thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:10,476 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:10,820 | INFO     | [data] copytool_in thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:10,910 | INFO     | [job] job monitor thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:10,981 | INFO     | [payload] validate_post thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:11,082 | INFO     | [job] control thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:11,167 | INFO     | [payload] failed_post thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:11,176 | INFO     | [data] control thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:11,279 | INFO     | [data] copytool_out thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:11,348 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 12:44:28] 2024-05-19 19:44:11,594 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:11,757 | INFO     | [job] validate thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:11,764 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:12,354 | INFO     | [job] queue monitor thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:13,392 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:19,840 | INFO     | job.realtimelogging is not enabled
[2024-05-19 12:44:28] 2024-05-19 19:44:20,845 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 12:44:28] 2024-05-19 19:44:21,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140566450972480)>', '<ExcThread(monitor, started 140566246643456)>']
[2024-05-19 12:44:28] 2024-05-19 19:44:22,318 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 12:44:28] 2024-05-19 19:44:22,318 | INFO     | [monitor] control thread has ended
[2024-05-19 12:44:28] 2024-05-19 19:44:26,901 | INFO     | all workflow threads have been joined
[2024-05-19 12:44:28] 2024-05-19 19:44:26,902 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 12:44:28] 2024-05-19 19:44:26,902 | INFO     | traces error code: 0
[2024-05-19 12:44:28] 2024-05-19 19:44:26,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 12:44:28] 2024-05-19 19:44:26,983 [wrapper] ==== pilot stdout END ====
[2024-05-19 12:44:28] 2024-05-19 19:44:26,986 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 12:44:28] 2024-05-19 19:44:26,989 [wrapper] pilotpid: 163479
[2024-05-19 12:44:28] 2024-05-19 19:44:26,992 [wrapper] Pilot exit status: 0
[2024-05-19 12:44:28] 2024-05-19 19:44:27,002 [wrapper] pandaids: 6209572899
[2024-05-19 12:44:28] 2024-05-19 19:44:27,069 [wrapper] cleanup: SIGTERM to supervisor_pilot  68708 163480
[2024-05-19 12:44:28] 2024-05-19 19:44:27,073 [wrapper] Test setup, not cleaning
[2024-05-19 12:44:28] 2024-05-19 19:44:27,076 [wrapper] ==== wrapper stdout END ====
[2024-05-19 12:44:28] 2024-05-19 19:44:27,079 [wrapper] ==== wrapper stderr END ====
[2024-05-19 12:44:28] 2024-05-19 19:44:27,086 [wrapper] apfmon messages muted
[2024-05-19 12:44:28]  *** Error codes and diagnostics ***
[2024-05-19 12:44:28]     "exeErrorCode": 0,
[2024-05-19 12:44:28]     "exeErrorDiag": "",
[2024-05-19 12:44:28]     "pilotErrorCode": 0,
[2024-05-19 12:44:28]     "pilotErrorDiag": "",
[2024-05-19 12:44:28]  *** Listing of results directory ***
[2024-05-19 12:44:28] total 824280
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc    467845 May 19 02:58 pilot3.tar.gz
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc      5633 May 19 03:00 queuedata.json
[2024-05-19 12:44:28] -rwx------ 1 boinc boinc     32251 May 19 03:01 runpilot2-wrapper.sh
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc       100 May 19 11:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 12:44:28] -rwxr-xr-x 1 boinc boinc      7986 May 19 11:04 run_atlas
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc       105 May 19 11:04 job.xml
[2024-05-19 12:44:28] -rw-r--r-- 2 boinc boinc 604564726 May 19 11:04 EVNT.38776100._000715.pool.root.1
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc      6621 May 19 11:04 init_data.xml
[2024-05-19 12:44:28] -rw-r--r-- 2 boinc boinc     17537 May 19 11:04 start_atlas.sh
[2024-05-19 12:44:28] drwxrwx--x 2 boinc boinc      4096 May 19 11:04 shared
[2024-05-19 12:44:28] -rw-r--r-- 2 boinc boinc    480007 May 19 11:04 input.tar.gz
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc         0 May 19 11:04 boinc_lockfile
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc      2644 May 19 11:04 pandaJob.out
[2024-05-19 12:44:28] -rw------- 1 boinc boinc       424 May 19 11:04 setup.sh.local
[2024-05-19 12:44:28] -rw------- 1 boinc boinc   1014061 May 19 11:05 agis_schedconf.cvmfs.json
[2024-05-19 12:44:28] -rw------- 1 boinc boinc         0 May 19 11:05 agis_ddmendpoints.agis.ALL.json
[2024-05-19 12:44:28] -rw------- 1 boinc boinc   1324701 May 19 11:05 cric_ddmendpoints.json
[2024-05-19 12:44:28] drwx------ 4 boinc boinc      4096 May 19 11:05 pilot3
[2024-05-19 12:44:28] -rw------- 1 boinc boinc 234202252 May 19 12:43 HITS.38776104._022563.pool.root.1
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc       531 May 19 12:43 boinc_task_state.xml
[2024-05-19 12:44:28] -rw------- 1 boinc boinc        95 May 19 12:43 pilot_heartbeat.json
[2024-05-19 12:44:28] -rw------- 1 boinc boinc      1048 May 19 12:43 memory_monitor_summary.json
[2024-05-19 12:44:28] -rw------- 1 boinc boinc    366287 May 19 12:43 log.38776104._022563.job.log.tgz.1
[2024-05-19 12:44:28] -rw------- 1 boinc boinc      7761 May 19 12:44 heartbeat.json
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc        27 May 19 12:44 wrapper_checkpoint.txt
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc      8192 May 19 12:44 boinc_mmap_file
[2024-05-19 12:44:28] -rw------- 1 boinc boinc      4405 May 19 12:44 pilotlog.txt
[2024-05-19 12:44:28] -rw------- 1 boinc boinc    518401 May 19 12:44 log.38776104._022563.job.log.1
[2024-05-19 12:44:28] -rw------- 1 boinc boinc       357 May 19 12:44 output.list
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc       620 May 19 12:44 runtime_log
[2024-05-19 12:44:28] -rw------- 1 boinc boinc    901120 May 19 12:44 result.tar.gz
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc     11286 May 19 12:44 runtime_log.err
[2024-05-19 12:44:28] -rw------- 1 boinc boinc       653 May 19 12:44 7PxKDmvWsS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmT5TKDmn5FnQo.diag
[2024-05-19 12:44:28] -rw-r--r-- 1 boinc boinc     21367 May 19 12:44 stderr.txt
[2024-05-19 12:44:28] HITS file was successfully produced:
[2024-05-19 12:44:28] -rw------- 1 boinc boinc 234202252 May 19 12:43 shared/HITS.pool.root.1
[2024-05-19 12:44:28]  *** Contents of shared directory: ***
[2024-05-19 12:44:28] total 820492
[2024-05-19 12:44:28] -rw-r--r-- 2 boinc boinc 604564726 May 19 11:04 ATLAS.root_0
[2024-05-19 12:44:28] -rw-r--r-- 2 boinc boinc     17537 May 19 11:04 start_atlas.sh
[2024-05-19 12:44:28] -rw-r--r-- 2 boinc boinc    480007 May 19 11:04 input.tar.gz
[2024-05-19 12:44:28] -rw------- 1 boinc boinc 234202252 May 19 12:43 HITS.pool.root.1
[2024-05-19 12:44:28] -rw------- 1 boinc boinc    901120 May 19 12:44 result.tar.gz
12:44:30 (157093): run_atlas exited; CPU time 35596.446393
12:44:30 (157093): called boinc_finish(0)

</stderr_txt>
]]>

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