Stderr output

<core_client_version>8.0.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:50 (36617): wrapper (7.15.26016): starting
13:59:50 (36617): wrapper (7.15.26016): starting
13:59:50 (36617): wrapper: running run_atlas (--nthreads 2)
[2024-05-19 13:59:50] Arguments: --nthreads 2
[2024-05-19 13:59:50] Threads: 2
[2024-05-19 13:59:50] Checking for CVMFS
[2024-05-19 13:59:51] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 13:59:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 13:59:51] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 13:59:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 13:59:52] 2.11.3.0 4091 7169 61212 132912 3 104 5206846 6291456 7441 130560 0 25234991 99.995 1109452 3306 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.0.2.73:7028 1
[2024-05-19 13:59:52] CVMFS is ok
[2024-05-19 13:59:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 13:59:52] Checking for apptainer binary...
[2024-05-19 13:59:52] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 13:59:52] Running /usr/bin/apptainer --version
[2024-05-19 13:59:52] apptainer version 1.3.0-1.2
[2024-05-19 13:59:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 13:59:52] s3
[2024-05-19 13:59:52] apptainer works
[2024-05-19 13:59:52] Set ATHENA_PROC_NUMBER=2
[2024-05-19 13:59:52] Set ATHENA_CORE_NUMBER=2
[2024-05-19 13:59:53] Starting ATLAS job with PandaID=6209471261
[2024-05-19 13:59:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc3/BOINC_ATLAS/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 13:59:53] Starting apptainer container.
[2024-05-19 13:59:53] To get some details on systemd level run
[2024-05-19 13:59:53] systemctl status ATLAS_boinc3_3_oqoNDmNHpS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmpoTKDmw6uZRm_0.scope
[2024-05-19 13:59:53] ----,^^^^,<<<~_____---,^^^,<<~____--,^^,<~__;_
[2024-05-20 06:33:52] Container ATLAS_boinc3_3_oqoNDmNHpS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmpoTKDmw6uZRm_0 finished with status code 0.
[2024-05-20 06:33:52]  *** The last 200 lines of the pilot log: ***
[2024-05-20 06:33:52] 2024-05-20 04:33:27,444 | INFO     | monitor loop #4471: job 0:6209471261 is in state 'finished'
[2024-05-20 06:33:52] 2024-05-20 04:33:27,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-20 06:33:52] 2024-05-20 04:33:29,951 | INFO     | monitor loop #4472: job 0:6209471261 is in state 'finished'
[2024-05-20 06:33:52] 2024-05-20 04:33:29,951 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-20 06:33:52] 2024-05-20 04:33:30,021 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-20 06:33:52] 2024-05-20 04:33:30,022 | INFO     | using path: /home/boinc3/BOINC_ATLAS/slots/3/PanDA_Pilot-6209471261/memory_monitor_summary.json (trf name=prmon)
[2024-05-20 06:33:52] 2024-05-20 04:33:30,022 | INFO     | extracted standard info from prmon json
[2024-05-20 06:33:52] 2024-05-20 04:33:30,023 | INFO     | extracted standard memory fields from prmon json
[2024-05-20 06:33:52] 2024-05-20 04:33:30,023 | WARNING  | GPU info not found in prmon json
[2024-05-20 06:33:52] 2024-05-20 04:33:30,023 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 06:33:52] 2024-05-20 04:33:30,023 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 06:33:52] 2024-05-20 04:33:30,043 | INFO     | fitting pss+swap vs Time
[2024-05-20 06:33:52] 2024-05-20 04:33:30,044 | INFO     | model: linear, x: [1716120157.0, 1716120218.0, 1716120279.0, 1716120340.0, 1716120401.0, 1716120462.0, 1716120523.0, 1716120584.0, 1716120645.0, 1716120706.0, 1716
[2024-05-20 06:33:52] 2024-05-20 04:33:30,044 | INFO     | sum of square deviations: 287403342200.0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,063 | INFO     | sum of deviations: 275149907908.0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,064 | INFO     | mean x: 1716149864.0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,064 | INFO     | mean y: 2290958.7969230767
[2024-05-20 06:33:52] 2024-05-20 04:33:30,064 | INFO     | -- intersect: -1640690898.7603571
[2024-05-20 06:33:52] 2024-05-20 04:33:30,064 | INFO     | intersect: -1640690898.7603571
[2024-05-20 06:33:52] 2024-05-20 04:33:30,065 | INFO     | chi2: 3.453957776538321
[2024-05-20 06:33:52] 2024-05-20 04:33:30,066 | INFO     | model: linear, x: [1716120157.0, 1716120218.0, 1716120279.0, 1716120340.0, 1716120401.0, 1716120462.0, 1716120523.0, 1716120584.0, 1716120645.0, 1716120706.0, 1716
[2024-05-20 06:33:52] 2024-05-20 04:33:30,066 | INFO     | sum of square deviations: 283004385302.5
[2024-05-20 06:33:52] 2024-05-20 04:33:30,088 | INFO     | sum of deviations: 331990798191.50006
[2024-05-20 06:33:52] 2024-05-20 04:33:30,089 | INFO     | mean x: 1716149711.5
[2024-05-20 06:33:52] 2024-05-20 04:33:30,089 | INFO     | mean y: 2292920.83814433
[2024-05-20 06:33:52] 2024-05-20 04:33:30,089 | INFO     | -- intersect: -2010912323.0594122
[2024-05-20 06:33:52] 2024-05-20 04:33:30,089 | INFO     | intersect: -2010912323.0594122
[2024-05-20 06:33:52] 2024-05-20 04:33:30,090 | INFO     | chi2: 2.7048048976250887
[2024-05-20 06:33:52] 2024-05-20 04:33:30,090 | INFO     | current chi2=2.7048048976250887 (change=21.689694182192927 %)
[2024-05-20 06:33:52] 2024-05-20 04:33:30,090 | INFO     | right removable region: 969
[2024-05-20 06:33:52] 2024-05-20 04:33:30,091 | INFO     | model: linear, x: [1716120462.0, 1716120523.0, 1716120584.0, 1716120645.0, 1716120706.0, 1716120767.0, 1716120828.0, 1716120889.0, 1716120950.0, 1716121011.0, 1716
[2024-05-20 06:33:52] 2024-05-20 04:33:30,098 | INFO     | sum of square deviations: 283004385302.5
[2024-05-20 06:33:52] 2024-05-20 04:33:30,149 | INFO     | sum of deviations: 50436592119.000015
[2024-05-20 06:33:52] 2024-05-20 04:33:30,149 | INFO     | mean x: 1716150016.5
[2024-05-20 06:33:52] 2024-05-20 04:33:30,149 | INFO     | mean y: 2298741.6350515466
[2024-05-20 06:33:52] 2024-05-20 04:33:30,149 | INFO     | -- intersect: -303550788.946272
[2024-05-20 06:33:52] 2024-05-20 04:33:30,149 | INFO     | intersect: -303550788.946272
[2024-05-20 06:33:52] 2024-05-20 04:33:30,155 | INFO     | chi2: 1.0237786626949301
[2024-05-20 06:33:52] 2024-05-20 04:33:30,155 | INFO     | current chi2=1.0237786626949301 (change=70.35925946607844 %)
[2024-05-20 06:33:52] 2024-05-20 04:33:30,156 | INFO     | model: linear, x: [1716120767.0, 1716120828.0, 1716120889.0, 1716120950.0, 1716121011.0, 1716121072.0, 1716121133.0, 1716121194.0, 1716121255.0, 1716121316.0, 1716
[2024-05-20 06:33:52] 2024-05-20 04:33:30,157 | INFO     | sum of square deviations: 278650545530.0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,186 | INFO     | sum of deviations: 35259534516.00002
[2024-05-20 06:33:52] 2024-05-20 04:33:30,186 | INFO     | mean x: 1716150169.0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,187 | INFO     | mean y: 2299267.4010362695
[2024-05-20 06:33:52] 2024-05-20 04:33:30,187 | INFO     | -- intersect: -214856798.10532063
[2024-05-20 06:33:52] 2024-05-20 04:33:30,187 | INFO     | intersect: -214856798.10532063
[2024-05-20 06:33:52] 2024-05-20 04:33:30,188 | INFO     | chi2: 0.8460099593492587
[2024-05-20 06:33:52] 2024-05-20 04:33:30,188 | INFO     | current chi2=0.8460099593492587 (change=17.363978154977787 %)
[2024-05-20 06:33:52] 2024-05-20 04:33:30,188 | INFO     | left removable region: 20
[2024-05-20 06:33:52] 2024-05-20 04:33:30,188 | INFO     | model: linear, x: [1716121377.0, 1716121438.0, 1716121499.0, 1716121560.0, 1716121621.0, 1716121682.0, 1716121743.0, 1716121804.0, 1716121865.0, 1716121926.0, 1716
[2024-05-20 06:33:52] 2024-05-20 04:33:30,189 | INFO     | sum of square deviations: 265018736450.0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,211 | INFO     | sum of deviations: 116460144394.99998
[2024-05-20 06:33:52] 2024-05-20 04:33:30,211 | INFO     | mean x: 1716150291.0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,211 | INFO     | mean y: 2300422.382507903
[2024-05-20 06:33:52] 2024-05-20 04:33:30,211 | INFO     | -- intersect: -751846674.4250742
[2024-05-20 06:33:52] 2024-05-20 04:33:30,211 | INFO     | intersect: -751846674.4250742
[2024-05-20 06:33:52] 2024-05-20 04:33:30,212 | INFO     | chi2: 0.0387646740302515
[2024-05-20 06:33:52] 2024-05-20 04:33:30,212 | INFO     | -- intersect: -751846674.4250742
[2024-05-20 06:33:52] 2024-05-20 04:33:30,212 | INFO     | current memory leak: 0.44 B/s (using 949 data points, chi2=0.04)
[2024-05-20 06:33:52] 2024-05-20 04:33:30,213 | INFO     | ..............................
[2024-05-20 06:33:52] 2024-05-20 04:33:30,213 | INFO     | . Timing measurements:
[2024-05-20 06:33:52] 2024-05-20 04:33:30,213 | INFO     | . get job = 0 s
[2024-05-20 06:33:52] 2024-05-20 04:33:30,214 | INFO     | . initial setup = 3 s
[2024-05-20 06:33:52] 2024-05-20 04:33:30,214 | INFO     | . payload setup = 32 s
[2024-05-20 06:33:52] 2024-05-20 04:33:30,214 | INFO     | . stage-in = 0 s
[2024-05-20 06:33:52] 2024-05-20 04:33:30,214 | INFO     | . payload execution = 59445 s
[2024-05-20 06:33:52] 2024-05-20 04:33:30,214 | INFO     | . stage-out = 1 s
[2024-05-20 06:33:52] 2024-05-20 04:33:30,214 | INFO     | . log creation = 0 s
[2024-05-20 06:33:52] 2024-05-20 04:33:30,214 | INFO     | ..............................
[2024-05-20 06:33:52] 2024-05-20 04:33:30,441 | INFO     | 
[2024-05-20 06:33:52] 2024-05-20 04:33:30,441 | INFO     | job summary report
[2024-05-20 06:33:52] 2024-05-20 04:33:30,441 | INFO     | --------------------------------------------------
[2024-05-20 06:33:52] 2024-05-20 04:33:30,441 | INFO     | PanDA job id: 6209471261
[2024-05-20 06:33:52] 2024-05-20 04:33:30,441 | INFO     | task id: 38920995
[2024-05-20 06:33:52] 2024-05-20 04:33:30,442 | INFO     | errors: (none)
[2024-05-20 06:33:52] 2024-05-20 04:33:30,442 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | pilot state: finished 
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | transexitcode: 0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | exeerrorcode: 0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | exeerrordiag: 
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | exitcode: 0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | exitmsg: OK
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | cpuconsumptiontime: 104823 s
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | nevents: 400
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | neventsw: 0
[2024-05-20 06:33:52] 2024-05-20 04:33:30,448 | INFO     | pid: 52199
[2024-05-20 06:33:52] 2024-05-20 04:33:30,449 | INFO     | pgrp: 52199
[2024-05-20 06:33:52] 2024-05-20 04:33:30,449 | INFO     | corecount: 2
[2024-05-20 06:33:52] 2024-05-20 04:33:30,449 | INFO     | event service: False
[2024-05-20 06:33:52] 2024-05-20 04:33:30,449 | INFO     | sizes: {0: 2392182, 1: 2392182, 11: 2392210, 22: 2392238, 26: 2392472, 33: 2392500, 59482: 2443353, 59484: 2452389, 59507: 2452503}
[2024-05-20 06:33:52] 2024-05-20 04:33:30,449 | INFO     | --------------------------------------------------
[2024-05-20 06:33:52] 2024-05-20 04:33:30,449 | INFO     | 
[2024-05-20 06:33:52] 2024-05-20 04:33:30,449 | INFO     | executing command: ls -lF /home/boinc3/BOINC_ATLAS/slots/3
[2024-05-20 06:33:52] 2024-05-20 04:33:30,515 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,515 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,515 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,515 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 06:33:52] 2024-05-20 04:33:30,516 | INFO     | job 6209471261 has completed (purged errors)
[2024-05-20 06:33:52] 2024-05-20 04:33:30,517 | INFO     | overall cleanup function is called
[2024-05-20 06:33:52] 2024-05-20 04:33:31,524 | INFO     | --- collectZombieJob: --- 10, [52199]
[2024-05-20 06:33:52] 2024-05-20 04:33:31,525 | INFO     | zombie collector waiting for pid 52199
[2024-05-20 06:33:52] 2024-05-20 04:33:31,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 06:33:52] 2024-05-20 04:33:32,528 | INFO     | collected zombie processes
[2024-05-20 06:33:52] 2024-05-20 04:33:32,528 | INFO     | will now attempt to kill all subprocesses of pid=52199
[2024-05-20 06:33:52] 2024-05-20 04:33:32,762 | INFO     | process IDs to be killed: [52199] (in reverse order)
[2024-05-20 06:33:52] 2024-05-20 04:33:33,088 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 06:33:52] 2024-05-20 04:33:33,089 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 06:33:52] 2024-05-20 04:33:33,098 | INFO     | did not find any defunct processes belonging to 52199
[2024-05-20 06:33:52] 2024-05-20 04:33:33,108 | INFO     | did not find any defunct processes belonging to 52199
[2024-05-20 06:33:52] 2024-05-20 04:33:33,108 | INFO     | ready for new job
[2024-05-20 06:33:52] 2024-05-20 04:33:33,108 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 06:33:52] 2024-05-20 04:33:33,113 | INFO     | *************************************
[2024-05-20 06:33:52] 2024-05-20 04:33:33,113 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 06:33:52] 2024-05-20 04:33:33,113 | INFO     | *************************************
[2024-05-20 06:33:52] 2024-05-20 04:33:33,113 | INFO     | 
[2024-05-20 06:33:52] 2024-05-20 04:33:33,115 | INFO     | architecture information:
[2024-05-20 06:33:52] 2024-05-20 04:33:33,115 | INFO     | executing command: cat /etc/os-release
[2024-05-20 06:33:52] 2024-05-20 04:33:33,162 | INFO     | cat /etc/os-release:
[2024-05-20 06:33:52] NAME="CentOS Linux"
[2024-05-20 06:33:52] VERSION="7 (Core)"
[2024-05-20 06:33:52] ID="centos"
[2024-05-20 06:33:52] ID_LIKE="rhel fedora"
[2024-05-20 06:33:52] VERSION_ID="7"
[2024-05-20 06:33:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 06:33:52] ANSI_COLOR="0;31"
[2024-05-20 06:33:52] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 06:33:52] HOME_URL="https://www.centos.org/"
[2024-05-20 06:33:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 06:33:52] 
[2024-05-20 06:33:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 06:33:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 06:33:52] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 06:33:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 06:33:52] 
[2024-05-20 06:33:52] 2024-05-20 04:33:33,163 | INFO     | *************************************
[2024-05-20 06:33:52] 2024-05-20 04:33:33,667 | INFO     | executing command: df -mP /home/boinc3/BOINC_ATLAS/slots/3
[2024-05-20 06:33:52] 2024-05-20 04:33:33,723 | INFO     | sufficient remaining disk space (97715748864 B)
[2024-05-20 06:33:52] 2024-05-20 04:33:33,724 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 06:33:52] 2024-05-20 04:33:33,724 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 06:33:52] 2024-05-20 04:33:33,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 06:33:52] 2024-05-20 04:33:33,725 | INFO     | aborting loop
[2024-05-20 06:33:52] 2024-05-20 04:33:33,781 | INFO     | all job control threads have been joined
[2024-05-20 06:33:52] 2024-05-20 04:33:34,518 | INFO     | all payload control threads have been joined
[2024-05-20 06:33:52] 2024-05-20 04:33:34,594 | INFO     | all data control threads have been joined
[2024-05-20 06:33:52] 2024-05-20 04:33:34,645 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 06:33:52] 2024-05-20 04:33:34,645 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 06:33:52] 2024-05-20 04:33:34,645 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 06:33:52] 2024-05-20 04:33:34,728 | INFO     | [job] job monitor thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:34,731 | INFO     | [job] retrieve thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:34,787 | INFO     | [job] control thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:34,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 06:33:52] 2024-05-20 04:33:34,959 | INFO     | [data] copytool_in thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:35,221 | INFO     | [job] validate thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:35,281 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:35,368 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 06:33:52] 2024-05-20 04:33:35,524 | INFO     | [payload] control thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:35,601 | INFO     | [data] control thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:35,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 06:33:52] 2024-05-20 04:33:35,684 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:35,951 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:36,224 | INFO     | [payload] failed_post thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:36,288 | INFO     | [payload] validate_post thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:36,374 | INFO     | [job] queue monitor thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:36,924 | INFO     | [data] copytool_out thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:39,688 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:44,711 | INFO     | job.realtimelogging is not enabled
[2024-05-20 06:33:52] 2024-05-20 04:33:45,714 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 06:33:52] 2024-05-20 04:33:46,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139925010134848)>', '<ExcThread(monitor, started 139924575618816)>']
[2024-05-20 06:33:52] 2024-05-20 04:33:47,718 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 06:33:52] 2024-05-20 04:33:47,718 | INFO     | [monitor] control thread has ended
[2024-05-20 06:33:52] 2024-05-20 04:33:51,901 | INFO     | all workflow threads have been joined
[2024-05-20 06:33:52] 2024-05-20 04:33:51,901 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 06:33:52] 2024-05-20 04:33:51,902 | INFO     | traces error code: 0
[2024-05-20 06:33:52] 2024-05-20 04:33:51,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 06:33:52] 2024-05-20 04:33:52,042 [wrapper] ==== pilot stdout END ====
[2024-05-20 06:33:52] 2024-05-20 04:33:52,057 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 06:33:52] 2024-05-20 04:33:52,069 [wrapper] pilotpid: 43386
[2024-05-20 06:33:52] 2024-05-20 04:33:52,076 [wrapper] Pilot exit status: 0
[2024-05-20 06:33:52] 2024-05-20 04:33:52,118 [wrapper] pandaids: 6209471261
[2024-05-20 06:33:52] 2024-05-20 04:33:52,239 [wrapper] cleanup: SIGTERM to supervisor_pilot  77156 43387
[2024-05-20 06:33:52] 2024-05-20 04:33:52,246 [wrapper] Test setup, not cleaning
[2024-05-20 06:33:52] 2024-05-20 04:33:52,263 [wrapper] ==== wrapper stdout END ====
[2024-05-20 06:33:52] 2024-05-20 04:33:52,272 [wrapper] ==== wrapper stderr END ====
[2024-05-20 06:33:52] 2024-05-20 04:33:52,314 [wrapper] apfmon messages muted
[2024-05-20 06:33:52]  *** Error codes and diagnostics ***
[2024-05-20 06:33:52]     "exeErrorCode": 0,
[2024-05-20 06:33:52]     "exeErrorDiag": "",
[2024-05-20 06:33:52]     "pilotErrorCode": 0,
[2024-05-20 06:33:52]     "pilotErrorDiag": "",
[2024-05-20 06:33:52]  *** Listing of results directory ***
[2024-05-20 06:33:52] total 982828
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc    467845 May 19 08:24 pilot3.tar.gz
[2024-05-20 06:33:52] -rwx------ 1 boinc3 boinc     32251 May 19 08:32 runpilot2-wrapper.sh
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc      5633 May 19 08:32 queuedata.json
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc       100 May 19 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 06:33:52] -rwxr-xr-x 1 boinc3 boinc      9842 May 19 13:59 run_atlas
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc       105 May 19 13:59 job.xml
[2024-05-20 06:33:52] -rw-r--r-- 2 boinc3 boinc     17537 May 19 13:59 start_atlas.sh
[2024-05-20 06:33:52] drwxrwx--x 2 boinc3 boinc       100 May 19 13:59 shared
[2024-05-20 06:33:52] -rw-r--r-- 2 boinc3 boinc    480009 May 19 13:59 input.tar.gz
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc      6691 May 19 13:59 init_data.xml
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc      8192 May 19 13:59 boinc_mmap_file
[2024-05-20 06:33:52] -rw-r--r-- 2 boinc3 boinc 631476582 May 19 13:59 EVNT.38776180._000089.pool.root.1
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc         0 May 19 13:59 boinc_lockfile
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc      2612 May 19 13:59 pandaJob.out
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc       452 May 19 13:59 setup.sh.local
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc   1014061 May 19 14:00 agis_schedconf.cvmfs.json
[2024-05-20 06:33:52] drwx------ 4 boinc3 boinc       400 May 19 14:00 pilot3
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc 353367267 May 20 06:32 HITS.38920995._005400.pool.root.1
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc      1020 May 20 06:33 memory_monitor_summary.json
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc         0 May 20 06:33 agis_ddmendpoints.agis.ALL.json
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc   1324701 May 20 06:33 cric_ddmendpoints.json
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc    845558 May 20 06:33 log.38920995._005400.job.log.tgz.1
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc      7650 May 20 06:33 heartbeat.json
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc        95 May 20 06:33 pilot_heartbeat.json
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc      4293 May 20 06:33 pilotlog.txt
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc   8186425 May 20 06:33 log.38920995._005400.job.log.1
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc       357 May 20 06:33 output.list
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc       620 May 20 06:33 runtime_log
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc   9052160 May 20 06:33 result.tar.gz
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc     11451 May 20 06:33 runtime_log.err
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc       635 May 20 06:33 oqoNDmNHpS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmpoTKDmw6uZRm.diag
[2024-05-20 06:33:52] -rw-r--r-- 1 boinc3 boinc     21828 May 20 06:33 stderr.txt
[2024-05-20 06:33:52] HITS file was successfully produced:
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc 353367267 May 20 06:32 shared/HITS.pool.root.1
[2024-05-20 06:33:52]  *** Contents of shared directory: ***
[2024-05-20 06:33:52] total 971100
[2024-05-20 06:33:52] -rw-r--r-- 2 boinc3 boinc     17537 May 19 13:59 start_atlas.sh
[2024-05-20 06:33:52] -rw-r--r-- 2 boinc3 boinc    480009 May 19 13:59 input.tar.gz
[2024-05-20 06:33:52] -rw-r--r-- 2 boinc3 boinc 631476582 May 19 13:59 ATLAS.root_0
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc 353367267 May 20 06:32 HITS.pool.root.1
[2024-05-20 06:33:52] -rw------- 1 boinc3 boinc   9052160 May 20 06:33 result.tar.gz
06:33:53 (36617): run_atlas exited; CPU time 104475.401833
06:33:53 (36617): called boinc_finish(0)

</stderr_txt>
]]>

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