Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:13:35 (778044): wrapper (7.7.26015): starting
12:13:35 (778044): wrapper: running run_atlas (--nthreads 4)
[2024-05-26 12:13:35] Arguments: --nthreads 4
[2024-05-26 12:13:35] Threads: 4
[2024-05-26 12:13:35] Checking for CVMFS
[2024-05-26 12:13:35] No cvmfs_config command found, will try listing directly
[2024-05-26 12:13:35] CVMFS is ok
[2024-05-26 12:13:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-26 12:13:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-26 12:13:35] Further information can be found at the LHC@home message board.
[2024-05-26 12:13:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-26 12:13:35] Checking for apptainer binary...
[2024-05-26 12:13:35] which: no apptainer in ((null))
[2024-05-26 12:13:35] apptainer is not installed, using version from CVMFS
[2024-05-26 12:13:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-26 12:13:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-26 12:13:36] apptainer works
[2024-05-26 12:13:36] Set ATHENA_PROC_NUMBER=4
[2024-05-26 12:13:36] Set ATHENA_CORE_NUMBER=4
[2024-05-26 12:13:36] Starting ATLAS job with PandaID=6209439592
[2024-05-26 12:13:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-26 14:37:09]  *** The last 200 lines of the pilot log: ***
[2024-05-26 14:37:09] 2024-05-26 12:36:47,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-26 14:37:09] 2024-05-26 12:36:47,942 | INFO     | fitting pss+swap vs Time
[2024-05-26 14:37:09] 2024-05-26 12:36:47,942 | INFO     | model: linear, x: [1716718449.0, 1716718510.0, 1716718571.0, 1716718632.0, 1716718693.0, 1716718754.0, 1716718815.0, 1716718876.0, 1716718937.0, 1716718998.0, 1716
[2024-05-26 14:37:09] 2024-05-26 12:36:47,942 | INFO     | sum of square deviations: 869188390.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,943 | INFO     | sum of deviations: 52748023334.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,943 | INFO     | mean x: 1716722719.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,943 | INFO     | mean y: 2226653.723404255
[2024-05-26 14:37:09] 2024-05-26 12:36:47,944 | INFO     | -- intersect: -104179710290.71729
[2024-05-26 14:37:09] 2024-05-26 12:36:47,944 | INFO     | intersect: -104179710290.71729
[2024-05-26 14:37:09] 2024-05-26 12:36:47,944 | INFO     | chi2: 4.965585108805343
[2024-05-26 14:37:09] 2024-05-26 12:36:47,944 | INFO     | model: linear, x: [1716718449.0, 1716718510.0, 1716718571.0, 1716718632.0, 1716718693.0, 1716718754.0, 1716718815.0, 1716718876.0, 1716718937.0, 1716718998.0, 1716
[2024-05-26 14:37:09] 2024-05-26 12:36:47,944 | INFO     | sum of square deviations: 779958810.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,945 | INFO     | sum of deviations: 59153944586.49999
[2024-05-26 14:37:09] 2024-05-26 12:36:47,945 | INFO     | mean x: 1716722566.5
[2024-05-26 14:37:09] 2024-05-26 12:36:47,945 | INFO     | mean y: 2237177.8602941176
[2024-05-26 14:37:09] 2024-05-26 12:36:47,945 | INFO     | -- intersect: -130198114772.94984
[2024-05-26 14:37:09] 2024-05-26 12:36:47,945 | INFO     | intersect: -130198114772.94984
[2024-05-26 14:37:09] 2024-05-26 12:36:47,946 | INFO     | chi2: 4.222993243263609
[2024-05-26 14:37:09] 2024-05-26 12:36:47,946 | INFO     | current chi2=4.222993243263609 (change=14.954770671937842 %)
[2024-05-26 14:37:09] 2024-05-26 12:36:47,946 | INFO     | right removable region: 135
[2024-05-26 14:37:09] 2024-05-26 12:36:47,946 | INFO     | model: linear, x: [1716718754.0, 1716718815.0, 1716718876.0, 1716718937.0, 1716718998.0, 1716719059.0, 1716719120.0, 1716719181.0, 1716719242.0, 1716719303.0, 1716
[2024-05-26 14:37:09] 2024-05-26 12:36:47,946 | INFO     | sum of square deviations: 779958810.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,947 | INFO     | sum of deviations: 20502255916.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,947 | INFO     | mean x: 1716722871.5
[2024-05-26 14:37:09] 2024-05-26 12:36:47,947 | INFO     | mean y: 2281571.867647059
[2024-05-26 14:37:09] 2024-05-26 12:36:47,947 | INFO     | -- intersect: -45124065098.08456
[2024-05-26 14:37:09] 2024-05-26 12:36:47,947 | INFO     | intersect: -45124065098.08456
[2024-05-26 14:37:09] 2024-05-26 12:36:47,947 | INFO     | chi2: 2.3781423951322376
[2024-05-26 14:37:09] 2024-05-26 12:36:47,947 | INFO     | current chi2=2.3781423951322376 (change=52.1075091248534 %)
[2024-05-26 14:37:09] 2024-05-26 12:36:47,948 | INFO     | model: linear, x: [1716719059.0, 1716719120.0, 1716719181.0, 1716719242.0, 1716719303.0, 1716719364.0, 1716719425.0, 1716719486.0, 1716719547.0, 1716719608.0, 1716
[2024-05-26 14:37:09] 2024-05-26 12:36:47,948 | INFO     | sum of square deviations: 697054930.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,948 | INFO     | sum of deviations: -5529541054.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,949 | INFO     | mean x: 1716723024.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,949 | INFO     | mean y: 2329466.4809160307
[2024-05-26 14:37:09] 2024-05-26 12:36:47,949 | INFO     | -- intersect: 13620611227.367434
[2024-05-26 14:37:09] 2024-05-26 12:36:47,949 | INFO     | intersect: 13620611227.367434
[2024-05-26 14:37:09] 2024-05-26 12:36:47,949 | INFO     | chi2: 0.8256680573773277
[2024-05-26 14:37:09] 2024-05-26 12:36:47,949 | INFO     | current chi2=0.8256680573773277 (change=65.28096639346039 %)
[2024-05-26 14:37:09] 2024-05-26 12:36:47,949 | INFO     | model: linear, x: [1716719364.0, 1716719425.0, 1716719486.0, 1716719547.0, 1716719608.0, 1716719669.0, 1716719730.0, 1716719791.0, 1716719852.0, 1716719913.0, 1716
[2024-05-26 14:37:09] 2024-05-26 12:36:47,949 | INFO     | sum of square deviations: 620244187.5
[2024-05-26 14:37:09] 2024-05-26 12:36:47,950 | INFO     | sum of deviations: -7954320517.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,950 | INFO     | mean x: 1716723176.5
[2024-05-26 14:37:09] 2024-05-26 12:36:47,950 | INFO     | mean y: 2334148.4285714286
[2024-05-26 14:37:09] 2024-05-26 12:36:47,950 | INFO     | -- intersect: 22018447576.083
[2024-05-26 14:37:09] 2024-05-26 12:36:47,950 | INFO     | intersect: 22018447576.083
[2024-05-26 14:37:09] 2024-05-26 12:36:47,951 | INFO     | chi2: 0.7814971396645723
[2024-05-26 14:37:09] 2024-05-26 12:36:47,951 | INFO     | current chi2=0.7814971396645723 (change=5.349718608839122 %)
[2024-05-26 14:37:09] 2024-05-26 12:36:47,951 | INFO     | left removable region: 30
[2024-05-26 14:37:09] 2024-05-26 12:36:47,951 | INFO     | model: linear, x: [1716720279.0, 1716720340.0, 1716720401.0, 1716720462.0, 1716720523.0, 1716720584.0, 1716720645.0, 1716720706.0, 1716720767.0, 1716720828.0, 1716
[2024-05-26 14:37:09] 2024-05-26 12:36:47,951 | INFO     | sum of square deviations: 358927660.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,951 | INFO     | sum of deviations: -12181028.999999996
[2024-05-26 14:37:09] 2024-05-26 12:36:47,951 | INFO     | mean x: 1716723451.0
[2024-05-26 14:37:09] 2024-05-26 12:36:47,951 | INFO     | mean y: 2350064.714285714
[2024-05-26 14:37:09] 2024-05-26 12:36:47,951 | INFO     | -- intersect: 60610991.558461145
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | intersect: 60610991.558461145
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | chi2: 0.00017842261146226656
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | -- intersect: 60610991.558461145
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | current memory leak: -0.03 B/s (using 105 data points, chi2=0.00)
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | ..............................
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | . Timing measurements:
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | . get job = 0 s
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | . initial setup = 1 s
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | . payload setup = 5 s
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | . stage-in = 0 s
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | . payload execution = 8551 s
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | . stage-out = 0 s
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | . log creation = 0 s
[2024-05-26 14:37:09] 2024-05-26 12:36:47,952 | INFO     | ..............................
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | 
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | job summary report
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | --------------------------------------------------
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | PanDA job id: 6209439592
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | task id: 38776104
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | errors: (none)
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | pilot state: finished 
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | transexitcode: 0
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | exeerrorcode: 0
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | exeerrordiag: 
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | exitcode: 0
[2024-05-26 14:37:09] 2024-05-26 12:36:48,012 | INFO     | exitmsg: OK
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | cpuconsumptiontime: 31542 s
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | nevents: 400
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | neventsw: 0
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | pid: 790279
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | pgrp: 790279
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | corecount: 4
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | event service: False
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | sizes: {0: 2377176, 1: 2378723, 5: 2378929, 12: 2378985, 8560: 2415865, 8562: 2415865, 8568: 2416163}
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | --------------------------------------------------
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | 
[2024-05-26 14:37:09] 2024-05-26 12:36:48,013 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2024-05-26 14:37:09] 2024-05-26 12:36:48,032 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,032 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,032 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,034 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,034 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-26 14:37:09] 2024-05-26 12:36:48,034 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,034 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-26 14:37:09] 2024-05-26 12:36:48,034 | INFO     | job 6209439592 has completed (purged errors)
[2024-05-26 14:37:09] 2024-05-26 12:36:48,034 | INFO     | overall cleanup function is called
[2024-05-26 14:37:09] 2024-05-26 12:36:49,042 | INFO     | --- collectZombieJob: --- 10, [790279]
[2024-05-26 14:37:09] 2024-05-26 12:36:49,042 | INFO     | zombie collector waiting for pid 790279
[2024-05-26 14:37:09] 2024-05-26 12:36:49,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-26 14:37:09] 2024-05-26 12:36:50,048 | INFO     | collected zombie processes
[2024-05-26 14:37:09] 2024-05-26 12:36:50,048 | INFO     | will now attempt to kill all subprocesses of pid=790279
[2024-05-26 14:37:09] 2024-05-26 12:36:50,286 | INFO     | process IDs to be killed: [790279] (in reverse order)
[2024-05-26 14:37:09] 2024-05-26 12:36:50,429 | WARNING  | found no corresponding commands to process id(s)
[2024-05-26 14:37:09] 2024-05-26 12:36:50,429 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-26 14:37:09] 2024-05-26 12:36:50,445 | INFO     | did not find any defunct processes belonging to 790279
[2024-05-26 14:37:09] 2024-05-26 12:36:50,452 | INFO     | did not find any defunct processes belonging to 790279
[2024-05-26 14:37:09] 2024-05-26 12:36:50,453 | INFO     | ready for new job
[2024-05-26 14:37:09] 2024-05-26 12:36:50,453 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-26 14:37:09] 2024-05-26 12:36:50,454 | INFO     | *************************************
[2024-05-26 14:37:09] 2024-05-26 12:36:50,454 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-26 14:37:09] 2024-05-26 12:36:50,454 | INFO     | *************************************
[2024-05-26 14:37:09] 2024-05-26 12:36:50,454 | INFO     | 
[2024-05-26 14:37:09] 2024-05-26 12:36:50,459 | INFO     | architecture information:
[2024-05-26 14:37:09] 2024-05-26 12:36:50,459 | INFO     | executing command: cat /etc/os-release
[2024-05-26 14:37:09] 2024-05-26 12:36:50,471 | INFO     | cat /etc/os-release:
[2024-05-26 14:37:09] NAME="CentOS Linux"
[2024-05-26 14:37:09] VERSION="7 (Core)"
[2024-05-26 14:37:09] ID="centos"
[2024-05-26 14:37:09] ID_LIKE="rhel fedora"
[2024-05-26 14:37:09] VERSION_ID="7"
[2024-05-26 14:37:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-26 14:37:09] ANSI_COLOR="0;31"
[2024-05-26 14:37:09] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-26 14:37:09] HOME_URL="https://www.centos.org/"
[2024-05-26 14:37:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-26 14:37:09] 
[2024-05-26 14:37:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-26 14:37:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-26 14:37:09] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-26 14:37:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-26 14:37:09] 
[2024-05-26 14:37:09] 2024-05-26 12:36:50,472 | INFO     | *************************************
[2024-05-26 14:37:09] 2024-05-26 12:36:50,975 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2024-05-26 14:37:09] 2024-05-26 12:36:50,989 | INFO     | sufficient remaining disk space (3292102918144 B)
[2024-05-26 14:37:09] 2024-05-26 12:36:50,989 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-26 14:37:09] 2024-05-26 12:36:50,989 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-26 14:37:09] 2024-05-26 12:36:50,989 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-26 14:37:09] 2024-05-26 12:36:50,990 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-26 14:37:09] 2024-05-26 12:36:50,990 | INFO     | found 0 job(s) in 20 queues
[2024-05-26 14:37:09] 2024-05-26 12:36:50,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-26 14:37:09] 2024-05-26 12:36:50,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-26 14:37:09] 2024-05-26 12:36:51,604 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-26 14:37:09] 2024-05-26 12:36:51,604 | INFO     | aborting loop
[2024-05-26 14:37:09] 2024-05-26 12:36:51,644 | INFO     | all payload control threads have been joined
[2024-05-26 14:37:09] 2024-05-26 12:36:51,846 | INFO     | all data control threads have been joined
[2024-05-26 14:37:09] 2024-05-26 12:36:51,995 | INFO     | [job] retrieve thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:52,463 | INFO     | all job control threads have been joined
[2024-05-26 14:37:09] 2024-05-26 12:36:52,516 | INFO     | [data] copytool_in thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:52,610 | INFO     | [job] job monitor thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:52,624 | INFO     | [payload] execute_payloads thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:52,649 | INFO     | [payload] control thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:52,851 | INFO     | [data] control thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:52,995 | INFO     | [data] copytool_out thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:53,001 | INFO     | [job] validate thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:53,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-26 14:37:09] 2024-05-26 12:36:53,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-26 14:37:09] 2024-05-26 12:36:53,102 | INFO     | [job] create_data_payload thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:53,236 | INFO     | [payload] validate_pre thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:53,467 | INFO     | [job] control thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:53,487 | INFO     | [payload] failed_post thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:53,490 | INFO     | [payload] validate_post thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:54,023 | INFO     | [job] queue monitor thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:36:57,043 | INFO     | [data] queue_monitor thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:37:01,456 | INFO     | job.realtimelogging is not enabled
[2024-05-26 14:37:09] 2024-05-26 12:37:02,457 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-26 14:37:09] 2024-05-26 12:37:03,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47895233594432)>', '<ExcThread(monitor, started 47895543834368)>']
[2024-05-26 14:37:09] 2024-05-26 12:37:04,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-26 14:37:09] 2024-05-26 12:37:04,055 | INFO     | [monitor] control thread has ended
[2024-05-26 14:37:09] 2024-05-26 12:37:08,454 | INFO     | all workflow threads have been joined
[2024-05-26 14:37:09] 2024-05-26 12:37:08,454 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-26 14:37:09] 2024-05-26 12:37:08,454 | INFO     | traces error code: 0
[2024-05-26 14:37:09] 2024-05-26 12:37:08,454 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-26 14:37:09] 2024-05-26 12:37:08,544 [wrapper] ==== pilot stdout END ====
[2024-05-26 14:37:09] 2024-05-26 12:37:08,547 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-26 14:37:09] 2024-05-26 12:37:08,548 [wrapper] pilotpid: 782706
[2024-05-26 14:37:09] 2024-05-26 12:37:08,550 [wrapper] Pilot exit status: 0
[2024-05-26 14:37:09] 2024-05-26 12:37:08,558 [wrapper] pandaids: 6209439592
[2024-05-26 14:37:09] 2024-05-26 12:37:08,638 [wrapper] cleanup: SIGTERM to supervisor_pilot 1628880 782707
[2024-05-26 14:37:09] 2024-05-26 12:37:08,640 [wrapper] Test setup, not cleaning
[2024-05-26 14:37:09] 2024-05-26 12:37:08,642 [wrapper] ==== wrapper stdout END ====
[2024-05-26 14:37:09] 2024-05-26 12:37:08,644 [wrapper] ==== wrapper stderr END ====
[2024-05-26 14:37:09] 2024-05-26 12:37:08,648 [wrapper] apfmon messages muted
[2024-05-26 14:37:09]  *** Error codes and diagnostics ***
[2024-05-26 14:37:09]     "exeErrorCode": 0,
[2024-05-26 14:37:09]     "exeErrorDiag": "",
[2024-05-26 14:37:09]     "pilotErrorCode": 0,
[2024-05-26 14:37:09]     "pilotErrorDiag": "",
[2024-05-26 14:37:09]  *** Listing of results directory ***
[2024-05-26 14:37:09] total 828340
[2024-05-26 14:37:09] -rwx------ 1 boinc boinc     32251 May 19 07:55 runpilot2-wrapper.sh
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc      5633 May 19 07:55 queuedata.json
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc    467845 May 19 07:55 pilot3.tar.gz
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc       100 May 26 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-26 14:37:09] -rwxr-xr-x 1 boinc boinc      7986 May 26 11:31 run_atlas
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc       105 May 26 11:31 job.xml
[2024-05-26 14:37:09] -rw-r--r-- 2 boinc boinc 603846000 May 26 12:13 EVNT.38776100._000659.pool.root.1
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc      6642 May 26 12:13 init_data.xml
[2024-05-26 14:37:09] drwxrwx--x 2 boinc boinc      4096 May 26 12:13 shared
[2024-05-26 14:37:09] -rw-r--r-- 2 boinc boinc    479996 May 26 12:13 input.tar.gz
[2024-05-26 14:37:09] -rw-r--r-- 2 boinc boinc     17537 May 26 12:13 start_atlas.sh
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc         0 May 26 12:13 boinc_lockfile
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc      2644 May 26 12:13 pandaJob.out
[2024-05-26 14:37:09] -rw------- 1 boinc boinc       424 May 26 12:13 setup.sh.local
[2024-05-26 14:37:09] -rw------- 1 boinc boinc   1010157 May 26 12:13 agis_schedconf.cvmfs.json
[2024-05-26 14:37:09] -rw------- 1 boinc boinc         0 May 26 12:13 agis_ddmendpoints.agis.ALL.json
[2024-05-26 14:37:09] -rw------- 1 boinc boinc   1317222 May 26 12:13 cric_ddmendpoints.json
[2024-05-26 14:37:09] drwx------ 4 boinc boinc      4096 May 26 12:13 pilot3
[2024-05-26 14:37:09] -rw------- 1 boinc boinc        95 May 26 14:36 pilot_heartbeat.json
[2024-05-26 14:37:09] -rw------- 1 boinc boinc 238535086 May 26 14:36 HITS.38776104._020927.pool.root.1
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc       530 May 26 14:36 boinc_task_state.xml
[2024-05-26 14:37:09] -rw------- 1 boinc boinc      1041 May 26 14:36 memory_monitor_summary.json
[2024-05-26 14:37:09] -rw------- 1 boinc boinc    285045 May 26 14:36 log.38776104._020927.job.log.tgz.1
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc      8192 May 26 14:36 boinc_mmap_file
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc        27 May 26 14:36 wrapper_checkpoint.txt
[2024-05-26 14:37:09] -rw------- 1 boinc boinc      7714 May 26 14:36 heartbeat.json
[2024-05-26 14:37:09] -rw------- 1 boinc boinc      4417 May 26 14:37 pilotlog.txt
[2024-05-26 14:37:09] -rw------- 1 boinc boinc    875978 May 26 14:37 log.38776104._020927.job.log.1
[2024-05-26 14:37:09] -rw------- 1 boinc boinc       357 May 26 14:37 output.list
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc       620 May 26 14:37 runtime_log
[2024-05-26 14:37:09] -rw------- 1 boinc boinc   1177600 May 26 14:37 result.tar.gz
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc     11409 May 26 14:37 runtime_log.err
[2024-05-26 14:37:09] -rw------- 1 boinc boinc       657 May 26 14:37 q12KDmEhoS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm8lTKDm3lBdyn.diag
[2024-05-26 14:37:09] -rw-r--r-- 1 boinc boinc     21291 May 26 14:37 stderr.txt
[2024-05-26 14:37:09] HITS file was successfully produced:
[2024-05-26 14:37:09] -rw------- 1 boinc boinc 238535086 May 26 14:36 shared/HITS.pool.root.1
[2024-05-26 14:37:09]  *** Contents of shared directory: ***
[2024-05-26 14:37:09] total 824296
[2024-05-26 14:37:09] -rw-r--r-- 2 boinc boinc 603846000 May 26 12:13 ATLAS.root_0
[2024-05-26 14:37:09] -rw-r--r-- 2 boinc boinc    479996 May 26 12:13 input.tar.gz
[2024-05-26 14:37:09] -rw-r--r-- 2 boinc boinc     17537 May 26 12:13 start_atlas.sh
[2024-05-26 14:37:09] -rw------- 1 boinc boinc 238535086 May 26 14:36 HITS.pool.root.1
[2024-05-26 14:37:09] -rw------- 1 boinc boinc   1177600 May 26 14:37 result.tar.gz
14:37:11 (778044): run_atlas exited; CPU time 31360.550782
14:37:11 (778044): called boinc_finish(0)

</stderr_txt>
]]>

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