Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:30:54 (3768021): wrapper (7.7.26015): starting
09:30:54 (3768021): wrapper: running run_atlas (--nthreads 4)
[2024-05-26 09:30:54] Arguments: --nthreads 4
[2024-05-26 09:30:54] Threads: 4
[2024-05-26 09:30:54] Checking for CVMFS
[2024-05-26 09:30:54] No cvmfs_config command found, will try listing directly
[2024-05-26 09:30:54] CVMFS is ok
[2024-05-26 09:30:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-26 09:30:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-26 09:30:54] Further information can be found at the LHC@home message board.
[2024-05-26 09:30:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-26 09:30:54] Checking for apptainer binary...
[2024-05-26 09:30:54] which: no apptainer in ((null))
[2024-05-26 09:30:54] apptainer is not installed, using version from CVMFS
[2024-05-26 09:30:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-26 09:30:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2024-05-26 09:30:55] apptainer works
[2024-05-26 09:30:55] Set ATHENA_PROC_NUMBER=4
[2024-05-26 09:30:55] Set ATHENA_CORE_NUMBER=4
[2024-05-26 09:30:55] Starting ATLAS job with PandaID=6209439481
[2024-05-26 09:30:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-26 11:42:23]  *** The last 200 lines of the pilot log: ***
[2024-05-26 11:42:23] 2024-05-26 09:42:01,714 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-26 11:42:23] 2024-05-26 09:42:01,714 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-26 11:42:23] 2024-05-26 09:42:01,716 | INFO     | fitting pss+swap vs Time
[2024-05-26 11:42:23] 2024-05-26 09:42:01,716 | INFO     | model: linear, x: [1716708689.0, 1716708750.0, 1716708811.0, 1716708872.0, 1716708933.0, 1716708994.0, 1716709055.0, 1716709116.0, 1716709177.0, 1716709238.0, 1716
[2024-05-26 11:42:23] 2024-05-26 09:42:01,716 | INFO     | sum of square deviations: 665612480.0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,717 | INFO     | sum of deviations: 42774378763.999985
[2024-05-26 11:42:23] 2024-05-26 09:42:01,717 | INFO     | mean x: 1716712593.0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,717 | INFO     | mean y: 2225397.9534883723
[2024-05-26 11:42:23] 2024-05-26 09:42:01,717 | INFO     | -- intersect: -110319195681.63705
[2024-05-26 11:42:23] 2024-05-26 09:42:01,717 | INFO     | intersect: -110319195681.63705
[2024-05-26 11:42:23] 2024-05-26 09:42:01,717 | INFO     | chi2: 4.981275071638814
[2024-05-26 11:42:23] 2024-05-26 09:42:01,717 | INFO     | model: linear, x: [1716708689.0, 1716708750.0, 1716708811.0, 1716708872.0, 1716708933.0, 1716708994.0, 1716709055.0, 1716709116.0, 1716709177.0, 1716709238.0, 1716
[2024-05-26 11:42:23] 2024-05-26 09:42:01,717 | INFO     | sum of square deviations: 591173875.0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | sum of deviations: 49043078991.5
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | mean x: 1716712440.5
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | mean y: 2237713.443548387
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | -- intersect: -142414177127.50702
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | intersect: -142414177127.50702
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | chi2: 4.181962739381522
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | current chi2=4.181962739381522 (change=16.046339958381832 %)
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | right removable region: 123
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | model: linear, x: [1716708994.0, 1716709055.0, 1716709116.0, 1716709177.0, 1716709238.0, 1716709299.0, 1716709360.0, 1716709421.0, 1716709482.0, 1716709543.0, 1716
[2024-05-26 11:42:23] 2024-05-26 09:42:01,718 | INFO     | sum of square deviations: 591173875.0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,719 | INFO     | sum of deviations: 13691101171.499996
[2024-05-26 11:42:23] 2024-05-26 09:42:01,719 | INFO     | mean x: 1716712745.5
[2024-05-26 11:42:23] 2024-05-26 09:42:01,719 | INFO     | mean y: 2284724.2983870967
[2024-05-26 11:42:23] 2024-05-26 09:42:01,719 | INFO     | -- intersect: -39755371821.40744
[2024-05-26 11:42:23] 2024-05-26 09:42:01,719 | INFO     | intersect: -39755371821.40744
[2024-05-26 11:42:23] 2024-05-26 09:42:01,719 | INFO     | chi2: 2.4131725401364434
[2024-05-26 11:42:23] 2024-05-26 09:42:01,719 | INFO     | current chi2=2.4131725401364434 (change=51.55512383012163 %)
[2024-05-26 11:42:23] 2024-05-26 09:42:01,719 | INFO     | model: linear, x: [1716709299.0, 1716709360.0, 1716709421.0, 1716709482.0, 1716709543.0, 1716709604.0, 1716709665.0, 1716709726.0, 1716709787.0, 1716709848.0, 1716
[2024-05-26 11:42:23] 2024-05-26 09:42:01,719 | INFO     | sum of square deviations: 522502820.0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | sum of deviations: -9375036686.0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | mean x: 1716712898.0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | mean y: 2335967.6974789915
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | -- intersect: 30804555175.010803
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | intersect: 30804555175.010803
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | chi2: 0.915824424268415
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | current chi2=0.915824424268415 (change=62.04894556704041 %)
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | model: linear, x: [1716709604.0, 1716709665.0, 1716709726.0, 1716709787.0, 1716709848.0, 1716709909.0, 1716709970.0, 1716710031.0, 1716710092.0, 1716710153.0, 1716
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | sum of square deviations: 459366752.5
[2024-05-26 11:42:23] 2024-05-26 09:42:01,720 | INFO     | sum of deviations: -11920092197.5
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | mean x: 1716713050.5
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | mean y: 2341940.8333333335
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | -- intersect: 44549270353.14039
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | intersect: 44549270353.14039
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | chi2: 0.8565031257514734
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | current chi2=0.8565031257514734 (change=6.477365851465374 %)
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | left removable region: 30
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | model: linear, x: [1716710519.0, 1716710580.0, 1716710641.0, 1716710702.0, 1716710763.0, 1716710824.0, 1716710885.0, 1716710946.0, 1716711007.0, 1716711068.0, 1716
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | sum of square deviations: 249388862.0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | sum of deviations: -1843883355.9999998
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | mean x: 1716713325.0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | mean y: 2353352.7634408604
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | -- intersect: 12695057836.85912
[2024-05-26 11:42:23] 2024-05-26 09:42:01,721 | INFO     | intersect: 12695057836.85912
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | chi2: 0.0055717190351768755
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | -- intersect: 12695057836.85912
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | current memory leak: -7.39 B/s (using 93 data points, chi2=0.01)
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | ..............................
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | . Timing measurements:
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | . get job = 0 s
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | . initial setup = 1 s
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | . payload setup = 5 s
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | . stage-in = 0 s
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | . payload execution = 7824 s
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | . stage-out = 0 s
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | . log creation = 0 s
[2024-05-26 11:42:23] 2024-05-26 09:42:01,722 | INFO     | ..............................
[2024-05-26 11:42:23] 2024-05-26 09:42:01,867 | INFO     | 
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | job summary report
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | --------------------------------------------------
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | PanDA job id: 6209439481
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | task id: 38776104
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | errors: (none)
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | pilot state: finished 
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | transexitcode: 0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | exeerrorcode: 0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | exeerrordiag: 
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | exitcode: 0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | exitmsg: OK
[2024-05-26 11:42:23] 2024-05-26 09:42:01,868 | INFO     | cpuconsumptiontime: 28549 s
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | nevents: 400
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | neventsw: 0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | pid: 3779828
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | pgrp: 3779828
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | corecount: 4
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | event service: False
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | sizes: {0: 2378632, 1: 2378774, 5: 2378980, 11: 2379036, 7833: 2406706, 7834: 2415688, 7836: 2415872, 7842: 2416042}
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | --------------------------------------------------
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | 
[2024-05-26 11:42:23] 2024-05-26 09:42:01,869 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,897 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | job 6209439481 has completed (purged errors)
[2024-05-26 11:42:23] 2024-05-26 09:42:01,898 | INFO     | overall cleanup function is called
[2024-05-26 11:42:23] 2024-05-26 09:42:02,905 | INFO     | --- collectZombieJob: --- 10, [3779828]
[2024-05-26 11:42:23] 2024-05-26 09:42:02,906 | INFO     | zombie collector waiting for pid 3779828
[2024-05-26 11:42:23] 2024-05-26 09:42:02,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-26 11:42:23] 2024-05-26 09:42:03,910 | INFO     | collected zombie processes
[2024-05-26 11:42:23] 2024-05-26 09:42:03,911 | INFO     | will now attempt to kill all subprocesses of pid=3779828
[2024-05-26 11:42:23] 2024-05-26 09:42:04,057 | INFO     | process IDs to be killed: [3779828] (in reverse order)
[2024-05-26 11:42:23] 2024-05-26 09:42:04,153 | WARNING  | found no corresponding commands to process id(s)
[2024-05-26 11:42:23] 2024-05-26 09:42:04,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-26 11:42:23] 2024-05-26 09:42:04,162 | INFO     | did not find any defunct processes belonging to 3779828
[2024-05-26 11:42:23] 2024-05-26 09:42:04,170 | INFO     | did not find any defunct processes belonging to 3779828
[2024-05-26 11:42:23] 2024-05-26 09:42:04,171 | INFO     | ready for new job
[2024-05-26 11:42:23] 2024-05-26 09:42:04,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-26 11:42:23] 2024-05-26 09:42:04,172 | INFO     | *************************************
[2024-05-26 11:42:23] 2024-05-26 09:42:04,172 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-26 11:42:23] 2024-05-26 09:42:04,173 | INFO     | *************************************
[2024-05-26 11:42:23] 2024-05-26 09:42:04,173 | INFO     | 
[2024-05-26 11:42:23] 2024-05-26 09:42:04,176 | INFO     | architecture information:
[2024-05-26 11:42:23] 2024-05-26 09:42:04,177 | INFO     | executing command: cat /etc/os-release
[2024-05-26 11:42:23] 2024-05-26 09:42:04,195 | INFO     | cat /etc/os-release:
[2024-05-26 11:42:23] NAME="CentOS Linux"
[2024-05-26 11:42:23] VERSION="7 (Core)"
[2024-05-26 11:42:23] ID="centos"
[2024-05-26 11:42:23] ID_LIKE="rhel fedora"
[2024-05-26 11:42:23] VERSION_ID="7"
[2024-05-26 11:42:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-26 11:42:23] ANSI_COLOR="0;31"
[2024-05-26 11:42:23] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-26 11:42:23] HOME_URL="https://www.centos.org/"
[2024-05-26 11:42:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-26 11:42:23] 
[2024-05-26 11:42:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-26 11:42:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-26 11:42:23] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-26 11:42:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-26 11:42:23] 
[2024-05-26 11:42:23] 2024-05-26 09:42:04,195 | INFO     | *************************************
[2024-05-26 11:42:23] 2024-05-26 09:42:04,698 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2024-05-26 11:42:23] 2024-05-26 09:42:04,722 | INFO     | sufficient remaining disk space (684326912000 B)
[2024-05-26 11:42:23] 2024-05-26 09:42:04,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-26 11:42:23] 2024-05-26 09:42:04,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-26 11:42:23] 2024-05-26 09:42:04,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-26 11:42:23] 2024-05-26 09:42:04,751 | INFO     | all payload control threads have been joined
[2024-05-26 11:42:23] 2024-05-26 09:42:05,008 | INFO     | all data control threads have been joined
[2024-05-26 11:42:23] 2024-05-26 09:42:05,019 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-26 11:42:23] 2024-05-26 09:42:05,019 | INFO     | aborting loop
[2024-05-26 11:42:23] 2024-05-26 09:42:05,061 | INFO     | found 0 job(s) in 20 queues
[2024-05-26 11:42:23] 2024-05-26 09:42:05,062 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-26 11:42:23] 2024-05-26 09:42:05,062 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-26 11:42:23] 2024-05-26 09:42:05,119 | INFO     | all job control threads have been joined
[2024-05-26 11:42:23] 2024-05-26 09:42:05,728 | INFO     | [job] retrieve thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:05,749 | INFO     | [payload] execute_payloads thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:05,753 | INFO     | [payload] control thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:05,894 | INFO     | [job] validate thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:06,013 | INFO     | [data] control thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:06,024 | INFO     | [job] job monitor thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:06,109 | INFO     | [data] copytool_in thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:06,125 | INFO     | [job] control thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:06,267 | INFO     | [job] create_data_payload thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:06,412 | INFO     | [payload] validate_pre thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:06,604 | INFO     | [payload] validate_post thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:06,673 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-26 11:42:23] 2024-05-26 09:42:06,728 | INFO     | [data] copytool_out thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:06,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-26 11:42:23] 2024-05-26 09:42:07,200 | INFO     | [payload] failed_post thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:07,791 | INFO     | [job] queue monitor thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:10,678 | INFO     | [data] queue_monitor thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:14,779 | INFO     | job.realtimelogging is not enabled
[2024-05-26 11:42:23] 2024-05-26 09:42:15,785 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-26 11:42:23] 2024-05-26 09:42:17,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47664814789696)>', '<ExcThread(monitor, started 47664990242560)>']
[2024-05-26 11:42:23] 2024-05-26 09:42:18,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-26 11:42:23] 2024-05-26 09:42:18,124 | INFO     | [monitor] control thread has ended
[2024-05-26 11:42:23] 2024-05-26 09:42:22,677 | INFO     | all workflow threads have been joined
[2024-05-26 11:42:23] 2024-05-26 09:42:22,677 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-26 11:42:23] 2024-05-26 09:42:22,678 | INFO     | traces error code: 0
[2024-05-26 11:42:23] 2024-05-26 09:42:22,678 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-26 11:42:23] 2024-05-26 09:42:22,772 [wrapper] ==== pilot stdout END ====
[2024-05-26 11:42:23] 2024-05-26 09:42:22,775 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-26 11:42:23] 2024-05-26 09:42:22,778 [wrapper] pilotpid: 3772496
[2024-05-26 11:42:23] 2024-05-26 09:42:22,781 [wrapper] Pilot exit status: 0
[2024-05-26 11:42:23] 2024-05-26 09:42:22,789 [wrapper] pandaids: 6209439481
[2024-05-26 11:42:23] 2024-05-26 09:42:22,846 [wrapper] cleanup: SIGTERM to supervisor_pilot 4080469 3772497
[2024-05-26 11:42:23] 2024-05-26 09:42:22,849 [wrapper] Test setup, not cleaning
[2024-05-26 11:42:23] 2024-05-26 09:42:22,851 [wrapper] ==== wrapper stdout END ====
[2024-05-26 11:42:23] 2024-05-26 09:42:22,854 [wrapper] ==== wrapper stderr END ====
[2024-05-26 11:42:23] 2024-05-26 09:42:22,859 [wrapper] apfmon messages muted
[2024-05-26 11:42:23]  *** Error codes and diagnostics ***
[2024-05-26 11:42:23]     "exeErrorCode": 0,
[2024-05-26 11:42:23]     "exeErrorDiag": "",
[2024-05-26 11:42:23]     "pilotErrorCode": 0,
[2024-05-26 11:42:23]     "pilotErrorDiag": "",
[2024-05-26 11:42:23]  *** Listing of results directory ***
[2024-05-26 11:42:23] total 806632
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc    467845 May 19 07:44 pilot3.tar.gz
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc      5633 May 19 07:48 queuedata.json
[2024-05-26 11:42:23] -rwx------ 1 boinc boinc     32251 May 19 07:48 runpilot2-wrapper.sh
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc       100 May 26 09:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-26 11:42:23] -rwxr-xr-x 1 boinc boinc      7986 May 26 09:28 run_atlas
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc       105 May 26 09:28 job.xml
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc      6662 May 26 09:30 init_data.xml
[2024-05-26 11:42:23] -rw-r--r-- 2 boinc boinc 597293585 May 26 09:30 EVNT.38776100._000655.pool.root.1
[2024-05-26 11:42:23] drwxrwx--x 2 boinc boinc      4096 May 26 09:30 shared
[2024-05-26 11:42:23] -rw-r--r-- 2 boinc boinc    480000 May 26 09:30 input.tar.gz
[2024-05-26 11:42:23] -rw-r--r-- 2 boinc boinc     17537 May 26 09:30 start_atlas.sh
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc         0 May 26 09:30 boinc_lockfile
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc      2645 May 26 09:30 pandaJob.out
[2024-05-26 11:42:23] -rw------- 1 boinc boinc       424 May 26 09:30 setup.sh.local
[2024-05-26 11:42:23] -rw------- 1 boinc boinc   1010165 May 26 09:31 agis_schedconf.cvmfs.json
[2024-05-26 11:42:23] -rw------- 1 boinc boinc         0 May 26 09:31 agis_ddmendpoints.agis.ALL.json
[2024-05-26 11:42:23] -rw------- 1 boinc boinc   1317222 May 26 09:31 cric_ddmendpoints.json
[2024-05-26 11:42:23] drwx------ 4 boinc boinc      4096 May 26 09:31 pilot3
[2024-05-26 11:42:23] -rw------- 1 boinc boinc 223006254 May 26 11:41 HITS.38776104._020820.pool.root.1
[2024-05-26 11:42:23] -rw------- 1 boinc boinc        95 May 26 11:41 pilot_heartbeat.json
[2024-05-26 11:42:23] -rw------- 1 boinc boinc      1047 May 26 11:41 memory_monitor_summary.json
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc       530 May 26 11:41 boinc_task_state.xml
[2024-05-26 11:42:23] -rw------- 1 boinc boinc    271354 May 26 11:41 log.38776104._020820.job.log.tgz.1
[2024-05-26 11:42:23] -rw------- 1 boinc boinc      7763 May 26 11:42 heartbeat.json
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc      8192 May 26 11:42 boinc_mmap_file
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc        27 May 26 11:42 wrapper_checkpoint.txt
[2024-05-26 11:42:23] -rw------- 1 boinc boinc      4293 May 26 11:42 pilotlog.txt
[2024-05-26 11:42:23] -rw------- 1 boinc boinc    818691 May 26 11:42 log.38776104._020820.job.log.1
[2024-05-26 11:42:23] -rw------- 1 boinc boinc       357 May 26 11:42 output.list
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc       620 May 26 11:42 runtime_log
[2024-05-26 11:42:23] -rw------- 1 boinc boinc   1105920 May 26 11:42 result.tar.gz
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc     11409 May 26 11:42 runtime_log.err
[2024-05-26 11:42:23] -rw------- 1 boinc boinc       652 May 26 11:42 ITqMDmFaoS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm9XMKDm206e1m.diag
[2024-05-26 11:42:23] -rw-r--r-- 1 boinc boinc     21280 May 26 11:42 stderr.txt
[2024-05-26 11:42:23] HITS file was successfully produced:
[2024-05-26 11:42:23] -rw------- 1 boinc boinc 223006254 May 26 11:41 shared/HITS.pool.root.1
[2024-05-26 11:42:23]  *** Contents of shared directory: ***
[2024-05-26 11:42:23] total 802656
[2024-05-26 11:42:23] -rw-r--r-- 2 boinc boinc 597293585 May 26 09:30 ATLAS.root_0
[2024-05-26 11:42:23] -rw-r--r-- 2 boinc boinc    480000 May 26 09:30 input.tar.gz
[2024-05-26 11:42:23] -rw-r--r-- 2 boinc boinc     17537 May 26 09:30 start_atlas.sh
[2024-05-26 11:42:23] -rw------- 1 boinc boinc 223006254 May 26 11:41 HITS.pool.root.1
[2024-05-26 11:42:23] -rw------- 1 boinc boinc   1105920 May 26 11:42 result.tar.gz
11:42:25 (3768021): run_atlas exited; CPU time 28334.110857
11:42:25 (3768021): called boinc_finish(0)

</stderr_txt>
]]>

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