Stderr output

<core_client_version>7.16.16</core_client_version>
<![CDATA[
<stderr_txt>
12:21:45 (2520998): wrapper (7.7.26015): starting
12:21:45 (2520998): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 12:21:45] Arguments: --nthreads 12
[2024-05-19 12:21:45] Threads: 12
[2024-05-19 12:21:45] Checking for CVMFS
[2024-05-19 12:21:45] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 12:21:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 12:21:45] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 12:21:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 12:21:45] 2.11.2.0 954280 34073 235956 132908 0 236 3926085 4096001 4155 130560 156 64496367 99.846 12993726 429 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://192.168.20.99:8080 1
[2024-05-19 12:21:45] CVMFS is ok
[2024-05-19 12:21:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 12:21:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 12:21:45] Further information can be found at the LHC@home message board.
[2024-05-19 12:21:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 12:21:45] Checking for apptainer binary...
[2024-05-19 12:21:45] apptainer is not installed, using version from CVMFS
[2024-05-19 12:21:45] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 12:21:46] reimu
[2024-05-19 12:21:46] apptainer works
[2024-05-19 12:21:46] Set ATHENA_PROC_NUMBER=12
[2024-05-19 12:21:46] Set ATHENA_CORE_NUMBER=12
[2024-05-19 12:21:46] Starting ATLAS job with PandaID=6209439081
[2024-05-19 12:21:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 13:12:31]  *** The last 200 lines of the pilot log: ***
[2024-05-19 13:12:31]  filesize=344359
[2024-05-19 13:12:31]  filetype=log
[2024-05-19 13:12:31]  guid=b893257a-1b73-4b98-9fdb-642e847582a1
[2024-05-19 13:12:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-19 13:12:31]  is_tar=False
[2024-05-19 13:12:31]  lfn=log.38776104._020521.job.log.tgz.1
[2024-05-19 13:12:31]  mtime=0
[2024-05-19 13:12:31]  protocol_id=None
[2024-05-19 13:12:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 13:12:31]  replicas=None
[2024-05-19 13:12:31]  scope=mc23_13p6TeV
[2024-05-19 13:12:31]  status=None
[2024-05-19 13:12:31]  status_code=0
[2024-05-19 13:12:31]  storage_token=
[2024-05-19 13:12:31]  surl=/var/lib/boinc-client/slots/7/PanDA_Pilot-6209439081/log.38776104._020521.job.log.tgz.1
[2024-05-19 13:12:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/62/log.38776104._020521.job.log.tgz.1
[2024-05-19 13:12:31]  workdir=None
[2024-05-19 13:12:31] ]
[2024-05-19 13:12:31] 2024-05-19 10:12:04,669 | INFO     | transferring file log.38776104._020521.job.log.tgz.1 from /var/lib/boinc-client/slots/7/PanDA_Pilot-6209439081/log.38776104._020521.job.log.tgz.1 to /var/lib/boinc
[2024-05-19 13:12:31] 2024-05-19 10:12:04,669 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/7/PanDA_Pilot-6209439081/log.38776104._020521.job.log.tgz.1 /var/lib/boinc-client/slots/7/log.387761
[2024-05-19 13:12:31] 2024-05-19 10:12:04,690 | INFO     | adding to output.list: log.38776104._020521.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/62/log.38776104._020521.job.log.tg
[2024-05-19 13:12:31] 2024-05-19 10:12:04,691 | INFO     | summary of transferred files:
[2024-05-19 13:12:31] 2024-05-19 10:12:04,691 | INFO     |  -- lfn=log.38776104._020521.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 13:12:31] 2024-05-19 10:12:04,691 | INFO     | stage-out finished correctly
[2024-05-19 13:12:31] 2024-05-19 10:12:05,054 | INFO     | 3011s have passed since pilot start
[2024-05-19 13:12:31] 2024-05-19 10:12:07,392 | WARNING  | process 2544053 is no longer using CPU - aborting
[2024-05-19 13:12:31] 2024-05-19 10:12:07,392 | INFO     | will not send any job update
[2024-05-19 13:12:31] 2024-05-19 10:12:07,688 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 13:12:31] 2024-05-19 10:12:07,767 | INFO     | job 6209439081 has state=finished
[2024-05-19 13:12:31] 2024-05-19 10:12:07,767 | INFO     | preparing for final server update for job 6209439081 in state='finished'
[2024-05-19 13:12:31] 2024-05-19 10:12:07,767 | INFO     | this job has now completed (state=finished)
[2024-05-19 13:12:31] 2024-05-19 10:12:07,767 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 13:12:31] 2024-05-19 10:12:07,767 | INFO     | job 6209439081 has finished - writing final server update
[2024-05-19 13:12:31] 2024-05-19 10:12:07,767 | INFO     | total number of processed events: 400 (read)
[2024-05-19 13:12:31] 2024-05-19 10:12:07,770 | INFO     | executing command: lscpu
[2024-05-19 13:12:31] 2024-05-19 10:12:07,824 | INFO     | found 32 cores (32 cores per socket, 1 sockets)
[2024-05-19 13:12:31] 2024-05-19 10:12:07,824 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 13:12:31] 2024-05-19 10:12:07,858 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 13:12:31] 2024-05-19 10:12:09,893 | INFO     | monitor loop #239: job 0:6209439081 is in state 'finished'
[2024-05-19 13:12:31] 2024-05-19 10:12:09,893 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 13:12:31] 2024-05-19 10:12:11,020 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-19 13:12:31] 2024-05-19 10:12:11,020 | INFO     | using path: /var/lib/boinc-client/slots/7/PanDA_Pilot-6209439081/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 13:12:31] 2024-05-19 10:12:11,021 | INFO     | extracted standard info from prmon json
[2024-05-19 13:12:31] 2024-05-19 10:12:11,021 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 13:12:31] 2024-05-19 10:12:11,021 | WARNING  | GPU info not found in prmon json
[2024-05-19 13:12:31] 2024-05-19 10:12:11,021 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 13:12:31] 2024-05-19 10:12:11,021 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | fitting pss+swap vs Time
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | model: linear, x: [1716110843.0, 1716110904.0, 1716110965.0, 1716111026.0, 1716111087.0, 1716111148.0, 1716111209.0, 1716111270.0, 1716111331.0, 1716111392.0, 1716
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | sum of square deviations: 22960430.5
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | sum of deviations: 2044754800.5
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | mean x: 1716112093.5
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | mean y: 2808513.1666666665
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | -- intersect: -152826575124.92453
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | intersect: -152826575124.92453
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | chi2: 0.07237579883055453
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | -- intersect: -152826575124.92453
[2024-05-19 13:12:31] 2024-05-19 10:12:11,022 | INFO     | current memory leak: 89.06 B/s (using 42 data points, chi2=0.07)
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | ..............................
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | . Timing measurements:
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | . get job = 0 s
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | . initial setup = 1 s
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | . payload setup = 4 s
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | . stage-in = 0 s
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | . payload execution = 2986 s
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | . stage-out = 0 s
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | . log creation = 0 s
[2024-05-19 13:12:31] 2024-05-19 10:12:11,023 | INFO     | ..............................
[2024-05-19 13:12:31] 2024-05-19 10:12:11,379 | INFO     | 
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | job summary report
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | --------------------------------------------------
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | PanDA job id: 6209439081
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | task id: 38776104
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | errors: (none)
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | pilot state: finished 
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | transexitcode: 0
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | exeerrorcode: 0
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | exeerrordiag: 
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | exitcode: 0
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | exitmsg: OK
[2024-05-19 13:12:31] 2024-05-19 10:12:11,380 | INFO     | cpuconsumptiontime: 30702 s
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | nevents: 400
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | neventsw: 0
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | pid: 2544053
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | pgrp: 2544053
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | corecount: 12
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | event service: False
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | sizes: {0: 2392214, 4: 2392420, 11: 2392448, 2994: 2417791, 2995: 2426765, 2998: 2426821, 3002: 2427119}
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | --------------------------------------------------
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | 
[2024-05-19 13:12:31] 2024-05-19 10:12:11,381 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/7
[2024-05-19 13:12:31] 2024-05-19 10:12:11,402 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,402 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 13:12:31] 2024-05-19 10:12:11,403 | INFO     | job 6209439081 has completed (purged errors)
[2024-05-19 13:12:31] 2024-05-19 10:12:11,404 | INFO     | overall cleanup function is called
[2024-05-19 13:12:31] 2024-05-19 10:12:12,409 | INFO     | --- collectZombieJob: --- 10, [2544053]
[2024-05-19 13:12:31] 2024-05-19 10:12:12,409 | INFO     | zombie collector waiting for pid 2544053
[2024-05-19 13:12:31] 2024-05-19 10:12:12,409 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 13:12:31] 2024-05-19 10:12:13,413 | INFO     | collected zombie processes
[2024-05-19 13:12:31] 2024-05-19 10:12:13,413 | INFO     | will now attempt to kill all subprocesses of pid=2544053
[2024-05-19 13:12:31] 2024-05-19 10:12:13,517 | INFO     | process IDs to be killed: [2544053] (in reverse order)
[2024-05-19 13:12:31] 2024-05-19 10:12:13,584 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 13:12:31] 2024-05-19 10:12:13,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 13:12:31] 2024-05-19 10:12:13,589 | INFO     | did not find any defunct processes belonging to 2544053
[2024-05-19 13:12:31] 2024-05-19 10:12:13,592 | INFO     | did not find any defunct processes belonging to 2544053
[2024-05-19 13:12:31] 2024-05-19 10:12:13,593 | INFO     | ready for new job
[2024-05-19 13:12:31] 2024-05-19 10:12:13,593 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 13:12:31] 2024-05-19 10:12:13,593 | INFO     | *************************************
[2024-05-19 13:12:31] 2024-05-19 10:12:13,594 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 13:12:31] 2024-05-19 10:12:13,594 | INFO     | *************************************
[2024-05-19 13:12:31] 2024-05-19 10:12:13,594 | INFO     | 
[2024-05-19 13:12:31] 2024-05-19 10:12:13,599 | INFO     | architecture information:
[2024-05-19 13:12:31] 2024-05-19 10:12:13,599 | INFO     | executing command: cat /etc/os-release
[2024-05-19 13:12:31] 2024-05-19 10:12:13,613 | INFO     | cat /etc/os-release:
[2024-05-19 13:12:31] NAME="CentOS Linux"
[2024-05-19 13:12:31] VERSION="7 (Core)"
[2024-05-19 13:12:31] ID="centos"
[2024-05-19 13:12:31] ID_LIKE="rhel fedora"
[2024-05-19 13:12:31] VERSION_ID="7"
[2024-05-19 13:12:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 13:12:31] ANSI_COLOR="0;31"
[2024-05-19 13:12:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 13:12:31] HOME_URL="https://www.centos.org/"
[2024-05-19 13:12:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 13:12:31] 
[2024-05-19 13:12:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 13:12:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 13:12:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 13:12:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 13:12:31] 
[2024-05-19 13:12:31] 2024-05-19 10:12:13,613 | INFO     | *************************************
[2024-05-19 13:12:31] 2024-05-19 10:12:14,116 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/7
[2024-05-19 13:12:31] 2024-05-19 10:12:14,130 | INFO     | sufficient remaining disk space (2510666334208 B)
[2024-05-19 13:12:31] 2024-05-19 10:12:14,131 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 13:12:31] 2024-05-19 10:12:14,131 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 13:12:31] 2024-05-19 10:12:14,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:12:31] 2024-05-19 10:12:14,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 13:12:31] 2024-05-19 10:12:14,131 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 13:12:31] 2024-05-19 10:12:14,131 | INFO     | aborting loop
[2024-05-19 13:12:31] 2024-05-19 10:12:14,132 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 13:12:31] 2024-05-19 10:12:14,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 13:12:31] 2024-05-19 10:12:14,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 13:12:31] 2024-05-19 10:12:14,463 | INFO     | all job control threads have been joined
[2024-05-19 13:12:31] 2024-05-19 10:12:14,509 | INFO     | all data control threads have been joined
[2024-05-19 13:12:31] 2024-05-19 10:12:15,133 | INFO     | [job] retrieve thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:15,137 | INFO     | [job] job monitor thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:15,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 13:12:31] 2024-05-19 10:12:15,301 | INFO     | [job] validate thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:15,321 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:15,465 | INFO     | all payload control threads have been joined
[2024-05-19 13:12:31] 2024-05-19 10:12:15,465 | INFO     | [job] control thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:15,513 | INFO     | [data] control thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:15,745 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:15,881 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:16,097 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:12:31] 2024-05-19 10:12:16,101 | INFO     | [payload] validate_post thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:16,293 | INFO     | [data] copytool_in thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:16,469 | INFO     | [payload] control thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:16,505 | INFO     | [payload] failed_post thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:17,101 | INFO     | [job] queue monitor thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:17,261 | INFO     | [data] copytool_out thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:18,137 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:24,233 | INFO     | job.realtimelogging is not enabled
[2024-05-19 13:12:31] 2024-05-19 10:12:25,241 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 13:12:31] 2024-05-19 10:12:26,317 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970581468992)>', '<ExcThread(monitor, started 139969888773888)>']
[2024-05-19 13:12:31] 2024-05-19 10:12:27,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 13:12:31] 2024-05-19 10:12:27,189 | INFO     | [monitor] control thread has ended
[2024-05-19 13:12:31] 2024-05-19 10:12:31,341 | INFO     | all workflow threads have been joined
[2024-05-19 13:12:31] 2024-05-19 10:12:31,341 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 13:12:31] 2024-05-19 10:12:31,341 | INFO     | traces error code: 0
[2024-05-19 13:12:31] 2024-05-19 10:12:31,341 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 13:12:31] 2024-05-19 10:12:31,411 [wrapper] ==== pilot stdout END ====
[2024-05-19 13:12:31] 2024-05-19 10:12:31,414 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 13:12:31] 2024-05-19 10:12:31,416 [wrapper] pilotpid: 2530243
[2024-05-19 13:12:31] 2024-05-19 10:12:31,419 [wrapper] Pilot exit status: 0
[2024-05-19 13:12:31] 2024-05-19 10:12:31,427 [wrapper] pandaids: 6209439081
[2024-05-19 13:12:31] 2024-05-19 10:12:31,480 [wrapper] cleanup: SIGTERM to supervisor_pilot 2573794 2530244
[2024-05-19 13:12:31] 2024-05-19 10:12:31,483 [wrapper] Test setup, not cleaning
[2024-05-19 13:12:31] 2024-05-19 10:12:31,485 [wrapper] ==== wrapper stdout END ====
[2024-05-19 13:12:31] 2024-05-19 10:12:31,487 [wrapper] ==== wrapper stderr END ====
[2024-05-19 13:12:31] 2024-05-19 10:12:31,491 [wrapper] apfmon messages muted
[2024-05-19 13:12:31]  *** Error codes and diagnostics ***
[2024-05-19 13:12:31]     "exeErrorCode": 0,
[2024-05-19 13:12:31]     "exeErrorDiag": "",
[2024-05-19 13:12:31]     "pilotErrorCode": 0,
[2024-05-19 13:12:31]     "pilotErrorDiag": "",
[2024-05-19 13:12:31]  *** Listing of results directory ***
[2024-05-19 13:12:31] total 820108
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc    467845 May 19 07:47 pilot3.tar.gz
[2024-05-19 13:12:31] -rwx------ 1 boinc boinc     32251 May 19 08:10 runpilot2-wrapper.sh
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc      5633 May 19 08:10 queuedata.json
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc       100 May 19 12:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 13:12:31] -rwxr-xr-x 1 boinc boinc      7986 May 19 12:21 run_atlas
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc       105 May 19 12:21 job.xml
[2024-05-19 13:12:31] -rw-r--r-- 2 boinc boinc     17537 May 19 12:21 start_atlas.sh
[2024-05-19 13:12:31] drwxrwx--x 2 boinc boinc      4096 May 19 12:21 shared
[2024-05-19 13:12:31] -rw-r--r-- 2 boinc boinc    479999 May 19 12:21 input.tar.gz
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc      9354 May 19 12:21 init_data.xml
[2024-05-19 13:12:31] -rw-r--r-- 2 boinc boinc 601577603 May 19 12:21 EVNT.38776100._000643.pool.root.1
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc         0 May 19 12:21 boinc_lockfile
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc      2644 May 19 12:21 pandaJob.out
[2024-05-19 13:12:31] -rw------- 1 boinc boinc       468 May 19 12:21 setup.sh.local
[2024-05-19 13:12:31] -rw------- 1 boinc boinc   1014061 May 19 12:21 agis_schedconf.cvmfs.json
[2024-05-19 13:12:31] -rw------- 1 boinc boinc         0 May 19 12:21 agis_ddmendpoints.agis.ALL.json
[2024-05-19 13:12:31] -rw------- 1 boinc boinc   1324701 May 19 12:21 cric_ddmendpoints.json
[2024-05-19 13:12:31] drwx------ 4 boinc boinc      4096 May 19 12:21 pilot3
[2024-05-19 13:12:31] -rw------- 1 boinc boinc 233327756 May 19 13:11 HITS.38776104._020521.pool.root.1
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc       531 May 19 13:11 boinc_task_state.xml
[2024-05-19 13:12:31] -rw------- 1 boinc boinc      1019 May 19 13:12 memory_monitor_summary.json
[2024-05-19 13:12:31] -rw------- 1 boinc boinc        95 May 19 13:12 pilot_heartbeat.json
[2024-05-19 13:12:31] -rw------- 1 boinc boinc    344359 May 19 13:12 log.38776104._020521.job.log.tgz.1
[2024-05-19 13:12:31] -rw------- 1 boinc boinc      7641 May 19 13:12 heartbeat.json
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc      8192 May 19 13:12 boinc_mmap_file
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc        27 May 19 13:12 wrapper_checkpoint.txt
[2024-05-19 13:12:31] -rw------- 1 boinc boinc      4415 May 19 13:12 pilotlog.txt
[2024-05-19 13:12:31] -rw------- 1 boinc boinc    329084 May 19 13:12 log.38776104._020521.job.log.1
[2024-05-19 13:12:31] -rw------- 1 boinc boinc       357 May 19 13:12 output.list
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc       620 May 19 13:12 runtime_log
[2024-05-19 13:12:31] -rw------- 1 boinc boinc    696320 May 19 13:12 result.tar.gz
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc     11514 May 19 13:12 runtime_log.err
[2024-05-19 13:12:31] -rw------- 1 boinc boinc       630 May 19 13:12 h63LDmdznS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmYiTKDmtGlgZn.diag
[2024-05-19 13:12:31] -rw-r--r-- 1 boinc boinc     21273 May 19 13:12 stderr.txt
[2024-05-19 13:12:31] HITS file was successfully produced:
[2024-05-19 13:12:31] -rw------- 1 boinc boinc 233327756 May 19 13:11 shared/HITS.pool.root.1
[2024-05-19 13:12:31]  *** Contents of shared directory: ***
[2024-05-19 13:12:31] total 816520
[2024-05-19 13:12:31] -rw-r--r-- 2 boinc boinc     17537 May 19 12:21 start_atlas.sh
[2024-05-19 13:12:31] -rw-r--r-- 2 boinc boinc    479999 May 19 12:21 input.tar.gz
[2024-05-19 13:12:31] -rw-r--r-- 2 boinc boinc 601577603 May 19 12:21 ATLAS.root_0
[2024-05-19 13:12:31] -rw------- 1 boinc boinc 233327756 May 19 13:11 HITS.pool.root.1
[2024-05-19 13:12:31] -rw------- 1 boinc boinc    696320 May 19 13:12 result.tar.gz
13:12:33 (2520998): run_atlas exited; CPU time 30665.532744
13:12:33 (2520998): called boinc_finish(0)

</stderr_txt>
]]>

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