Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
13:12:26 (189887): wrapper (7.7.26015): starting
13:12:26 (189887): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 13:12:26] Arguments: --nthreads 12
[2024-05-19 13:12:26] Threads: 12
[2024-05-19 13:12:26] Checking for CVMFS
[2024-05-19 13:12:26] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 13:12:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 13:12:26] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 13:12:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 13:12:27] 2.10.1.0 81338 24488 145168 132923 2 288 25362454 45568000 21357 130560 0 94410836 99.800 56794604 19862 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-19 13:12:27] CVMFS is ok
[2024-05-19 13:12:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 13:12:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 13:12:27] Further information can be found at the LHC@home message board.
[2024-05-19 13:12:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 13:12:27] Checking for apptainer binary...
[2024-05-19 13:12:27] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 13:12:27] Running /usr/bin/apptainer --version
[2024-05-19 13:12:27] apptainer version 1.1.8-1.el7
[2024-05-19 13:12:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 13:12:28] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0122.triumf.lcg
[2024-05-19 13:12:28] apptainer works
[2024-05-19 13:12:28] Set ATHENA_PROC_NUMBER=12
[2024-05-19 13:12:28] Set ATHENA_CORE_NUMBER=12
[2024-05-19 13:12:28] Starting ATLAS job with PandaID=6209404043
[2024-05-19 13:12:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 18:11:11]  *** The last 200 lines of the pilot log: ***
[2024-05-19 18:11:11] 2024-05-20 01:10:55,570 | INFO     | intersect: -43683063936.81424
[2024-05-19 18:11:11] 2024-05-20 01:10:55,570 | INFO     | chi2: 6.912274041016733
[2024-05-19 18:11:11] 2024-05-20 01:10:55,571 | INFO     | model: linear, x: [1716149590.0, 1716149651.0, 1716149712.0, 1716149773.0, 1716149834.0, 1716149895.0, 1716149956.0, 1716150017.0, 1716150078.0, 1716150139.0, 1716
[2024-05-19 18:11:11] 2024-05-20 01:10:55,571 | INFO     | sum of square deviations: 7437460753.5799
[2024-05-19 18:11:11] 2024-05-20 01:10:55,575 | INFO     | sum of deviations: 217231502888.29172
[2024-05-19 18:11:11] 2024-05-20 01:10:55,575 | INFO     | mean x: 1716158352.6493056
[2024-05-19 18:11:11] 2024-05-20 01:10:55,575 | INFO     | mean y: 2663101.4583333335
[2024-05-19 18:11:11] 2024-05-20 01:10:55,575 | INFO     | -- intersect: -50122462998.98672
[2024-05-19 18:11:11] 2024-05-20 01:10:55,575 | INFO     | intersect: -50122462998.98672
[2024-05-19 18:11:11] 2024-05-20 01:10:55,575 | INFO     | chi2: 6.149131030064266
[2024-05-19 18:11:11] 2024-05-20 01:10:55,576 | INFO     | current chi2=6.149131030064266 (change=11.04040445190763 %)
[2024-05-19 18:11:11] 2024-05-20 01:10:55,576 | INFO     | right removable region: 287
[2024-05-19 18:11:11] 2024-05-20 01:10:55,576 | INFO     | model: linear, x: [1716149895.0, 1716149956.0, 1716150017.0, 1716150078.0, 1716150139.0, 1716150200.0, 1716150261.0, 1716150322.0, 1716150383.0, 1716150444.0, 1716
[2024-05-19 18:11:11] 2024-05-20 01:10:55,576 | INFO     | sum of square deviations: 7438305629.163154
[2024-05-19 18:11:11] 2024-05-20 01:10:55,578 | INFO     | sum of deviations: 110043221018.3507
[2024-05-19 18:11:11] 2024-05-20 01:10:55,578 | INFO     | mean x: 1716158658.1423612
[2024-05-19 18:11:11] 2024-05-20 01:10:55,578 | INFO     | mean y: 2690909.454861111
[2024-05-19 18:11:11] 2024-05-20 01:10:55,578 | INFO     | -- intersect: -25386374280.35003
[2024-05-19 18:11:11] 2024-05-20 01:10:55,578 | INFO     | intersect: -25386374280.35003
[2024-05-19 18:11:11] 2024-05-20 01:10:55,578 | INFO     | chi2: 3.784661148798312
[2024-05-19 18:11:11] 2024-05-20 01:10:55,578 | INFO     | current chi2=3.784661148798312 (change=45.24723518858603 %)
[2024-05-19 18:11:11] 2024-05-20 01:10:55,578 | INFO     | model: linear, x: [1716150200.0, 1716150261.0, 1716150322.0, 1716150383.0, 1716150444.0, 1716150505.0, 1716150566.0, 1716150627.0, 1716150694.0, 1716150749.0, 1716
[2024-05-19 18:11:11] 2024-05-20 01:10:55,579 | INFO     | sum of square deviations: 7058325481.07415
[2024-05-19 18:11:11] 2024-05-20 01:10:55,580 | INFO     | sum of deviations: 37279563705.85509
[2024-05-19 18:11:11] 2024-05-20 01:10:55,580 | INFO     | mean x: 1716158810.8127208
[2024-05-19 18:11:11] 2024-05-20 01:10:55,580 | INFO     | mean y: 2720145.3180212015
[2024-05-19 18:11:11] 2024-05-20 01:10:55,580 | INFO     | -- intersect: -9061420051.759016
[2024-05-19 18:11:11] 2024-05-20 01:10:55,581 | INFO     | intersect: -9061420051.759016
[2024-05-19 18:11:11] 2024-05-20 01:10:55,581 | INFO     | chi2: 1.842645796924086
[2024-05-19 18:11:11] 2024-05-20 01:10:55,581 | INFO     | current chi2=1.842645796924086 (change=51.31279328641736 %)
[2024-05-19 18:11:11] 2024-05-20 01:10:55,581 | INFO     | model: linear, x: [1716150505.0, 1716150566.0, 1716150627.0, 1716150694.0, 1716150749.0, 1716150814.0, 1716150872.0, 1716150932.0, 1716150994.0, 1716151054.0, 1716
[2024-05-19 18:11:11] 2024-05-20 01:10:55,581 | INFO     | sum of square deviations: 6691508353.467622
[2024-05-19 18:11:11] 2024-05-20 01:10:55,583 | INFO     | sum of deviations: -10946929082.438847
[2024-05-19 18:11:11] 2024-05-20 01:10:55,583 | INFO     | mean x: 1716158963.4892087
[2024-05-19 18:11:11] 2024-05-20 01:10:55,583 | INFO     | mean y: 2740138.68705036
[2024-05-19 18:11:11] 2024-05-20 01:10:55,583 | INFO     | -- intersect: 2810279108.2487698
[2024-05-19 18:11:11] 2024-05-20 01:10:55,583 | INFO     | intersect: 2810279108.2487698
[2024-05-19 18:11:11] 2024-05-20 01:10:55,583 | INFO     | chi2: 0.8557687818018631
[2024-05-19 18:11:11] 2024-05-20 01:10:55,583 | INFO     | current chi2=0.8557687818018631 (change=53.55760812900715 %)
[2024-05-19 18:11:11] 2024-05-20 01:10:55,584 | INFO     | model: linear, x: [1716150814.0, 1716150872.0, 1716150932.0, 1716150994.0, 1716151054.0, 1716151115.0, 1716151177.0, 1716151238.0, 1716151306.0, 1716151362.0, 1716
[2024-05-19 18:11:11] 2024-05-20 01:10:55,584 | INFO     | sum of square deviations: 6337722784.84248
[2024-05-19 18:11:11] 2024-05-20 01:10:55,585 | INFO     | sum of deviations: -16105495029.34798
[2024-05-19 18:11:11] 2024-05-20 01:10:55,585 | INFO     | mean x: 1716159116.1501832
[2024-05-19 18:11:11] 2024-05-20 01:10:55,585 | INFO     | mean y: 2742336.95970696
[2024-05-19 18:11:11] 2024-05-20 01:10:55,585 | INFO     | -- intersect: 4363865890.806337
[2024-05-19 18:11:11] 2024-05-20 01:10:55,586 | INFO     | intersect: 4363865890.806337
[2024-05-19 18:11:11] 2024-05-20 01:10:55,586 | INFO     | chi2: 0.8202275525191236
[2024-05-19 18:11:11] 2024-05-20 01:10:55,586 | INFO     | current chi2=0.8202275525191236 (change=4.153134589451335 %)
[2024-05-19 18:11:11] 2024-05-20 01:10:55,586 | INFO     | left removable region: 40
[2024-05-19 18:11:11] 2024-05-20 01:10:55,586 | INFO     | model: linear, x: [1716152032.0, 1716152091.0, 1716152152.0, 1716152216.0, 1716152276.0, 1716152335.0, 1716152397.0, 1716152457.0, 1716152519.0, 1716152585.0, 1716
[2024-05-19 18:11:11] 2024-05-20 01:10:55,586 | INFO     | sum of square deviations: 4696813566.64778
[2024-05-19 18:11:11] 2024-05-20 01:10:55,588 | INFO     | sum of deviations: 6355362264.623487
[2024-05-19 18:11:11] 2024-05-20 01:10:55,588 | INFO     | mean x: 1716159543.3562753
[2024-05-19 18:11:11] 2024-05-20 01:10:55,588 | INFO     | mean y: 2750078.24291498
[2024-05-19 18:11:11] 2024-05-20 01:10:55,588 | INFO     | -- intersect: -2319423337.2338214
[2024-05-19 18:11:11] 2024-05-20 01:10:55,588 | INFO     | intersect: -2319423337.2338214
[2024-05-19 18:11:11] 2024-05-20 01:10:55,588 | INFO     | chi2: 0.010969598850923079
[2024-05-19 18:11:11] 2024-05-20 01:10:55,588 | INFO     | -- intersect: -2319423337.2338214
[2024-05-19 18:11:11] 2024-05-20 01:10:55,588 | INFO     | current memory leak: 1.35 B/s (using 247 data points, chi2=0.01)
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | ..............................
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | . Timing measurements:
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | . get job = 0 s
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | . initial setup = 2 s
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | . payload setup = 6 s
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | . stage-in = 0 s
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | . payload execution = 17863 s
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | . stage-out = 1 s
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | . log creation = 0 s
[2024-05-19 18:11:11] 2024-05-20 01:10:55,589 | INFO     | ..............................
[2024-05-19 18:11:11] 2024-05-20 01:10:56,066 | INFO     | 
[2024-05-19 18:11:11] 2024-05-20 01:10:56,067 | INFO     | job summary report
[2024-05-19 18:11:11] 2024-05-20 01:10:56,067 | INFO     | --------------------------------------------------
[2024-05-19 18:11:11] 2024-05-20 01:10:56,067 | INFO     | PanDA job id: 6209404043
[2024-05-19 18:11:11] 2024-05-20 01:10:56,067 | INFO     | task id: 38776125
[2024-05-19 18:11:11] 2024-05-20 01:10:56,067 | INFO     | errors: (none)
[2024-05-19 18:11:11] 2024-05-20 01:10:56,067 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 18:11:11] 2024-05-20 01:10:56,067 | INFO     | pilot state: finished 
[2024-05-19 18:11:11] 2024-05-20 01:10:56,068 | INFO     | transexitcode: 0
[2024-05-19 18:11:11] 2024-05-20 01:10:56,068 | INFO     | exeerrorcode: 0
[2024-05-19 18:11:11] 2024-05-20 01:10:56,068 | INFO     | exeerrordiag: 
[2024-05-19 18:11:11] 2024-05-20 01:10:56,068 | INFO     | exitcode: 0
[2024-05-19 18:11:11] 2024-05-20 01:10:56,068 | INFO     | exitmsg: OK
[2024-05-19 18:11:11] 2024-05-20 01:10:56,068 | INFO     | cpuconsumptiontime: 42274 s
[2024-05-19 18:11:11] 2024-05-20 01:10:56,068 | INFO     | nevents: 400
[2024-05-19 18:11:11] 2024-05-20 01:10:56,068 | INFO     | neventsw: 0
[2024-05-19 18:11:11] 2024-05-20 01:10:56,069 | INFO     | pid: 200666
[2024-05-19 18:11:11] 2024-05-20 01:10:56,069 | INFO     | pgrp: 200666
[2024-05-19 18:11:11] 2024-05-20 01:10:56,069 | INFO     | corecount: 12
[2024-05-19 18:11:11] 2024-05-20 01:10:56,069 | INFO     | event service: False
[2024-05-19 18:11:11] 2024-05-20 01:10:56,069 | INFO     | sizes: {0: 2391334, 1: 2392269, 6: 2392475, 12: 2392503, 17870: 2422997, 17873: 2432135, 17878: 2432249}
[2024-05-19 18:11:11] 2024-05-20 01:10:56,069 | INFO     | --------------------------------------------------
[2024-05-19 18:11:11] 2024-05-20 01:10:56,069 | INFO     | 
[2024-05-19 18:11:11] 2024-05-20 01:10:56,069 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 18:11:11] 2024-05-20 01:10:56,108 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,109 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,109 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,109 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,109 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,109 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,111 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 18:11:11] 2024-05-20 01:10:56,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,111 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 18:11:11] 2024-05-20 01:10:56,112 | INFO     | job 6209404043 has completed (purged errors)
[2024-05-19 18:11:11] 2024-05-20 01:10:56,112 | INFO     | overall cleanup function is called
[2024-05-19 18:11:11] 2024-05-20 01:10:57,122 | INFO     | --- collectZombieJob: --- 10, [200666]
[2024-05-19 18:11:11] 2024-05-20 01:10:57,122 | INFO     | zombie collector waiting for pid 200666
[2024-05-19 18:11:11] 2024-05-20 01:10:57,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 18:11:11] 2024-05-20 01:10:58,126 | INFO     | collected zombie processes
[2024-05-19 18:11:11] 2024-05-20 01:10:58,127 | INFO     | will now attempt to kill all subprocesses of pid=200666
[2024-05-19 18:11:11] 2024-05-20 01:10:58,510 | INFO     | process IDs to be killed: [200666] (in reverse order)
[2024-05-19 18:11:11] 2024-05-20 01:10:58,600 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 18:11:11] 2024-05-20 01:10:58,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 18:11:11] 2024-05-20 01:10:58,606 | INFO     | did not find any defunct processes belonging to 200666
[2024-05-19 18:11:11] 2024-05-20 01:10:58,611 | INFO     | did not find any defunct processes belonging to 200666
[2024-05-19 18:11:11] 2024-05-20 01:10:58,611 | INFO     | ready for new job
[2024-05-19 18:11:11] 2024-05-20 01:10:58,611 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 18:11:11] 2024-05-20 01:10:58,614 | INFO     | *************************************
[2024-05-19 18:11:11] 2024-05-20 01:10:58,614 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 18:11:11] 2024-05-20 01:10:58,614 | INFO     | *************************************
[2024-05-19 18:11:11] 2024-05-20 01:10:58,614 | INFO     | 
[2024-05-19 18:11:11] 2024-05-20 01:10:58,617 | INFO     | architecture information:
[2024-05-19 18:11:11] 2024-05-20 01:10:58,617 | INFO     | executing command: cat /etc/os-release
[2024-05-19 18:11:11] 2024-05-20 01:10:58,633 | INFO     | cat /etc/os-release:
[2024-05-19 18:11:11] NAME="CentOS Linux"
[2024-05-19 18:11:11] VERSION="7 (Core)"
[2024-05-19 18:11:11] ID="centos"
[2024-05-19 18:11:11] ID_LIKE="rhel fedora"
[2024-05-19 18:11:11] VERSION_ID="7"
[2024-05-19 18:11:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 18:11:11] ANSI_COLOR="0;31"
[2024-05-19 18:11:11] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 18:11:11] HOME_URL="https://www.centos.org/"
[2024-05-19 18:11:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 18:11:11] 
[2024-05-19 18:11:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 18:11:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 18:11:11] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 18:11:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 18:11:11] 
[2024-05-19 18:11:11] 2024-05-20 01:10:58,633 | INFO     | *************************************
[2024-05-19 18:11:11] 2024-05-20 01:10:59,135 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 18:11:11] 2024-05-20 01:10:59,156 | INFO     | sufficient remaining disk space (2183964655616 B)
[2024-05-19 18:11:11] 2024-05-20 01:10:59,157 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 18:11:11] 2024-05-20 01:10:59,157 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 18:11:11] 2024-05-20 01:10:59,157 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 18:11:11] 2024-05-20 01:10:59,158 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 18:11:11] 2024-05-20 01:10:59,158 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 18:11:11] 2024-05-20 01:10:59,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 18:11:11] 2024-05-20 01:10:59,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 18:11:11] 2024-05-20 01:10:59,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 18:11:11] 2024-05-20 01:10:59,329 | INFO     | aborting loop
[2024-05-19 18:11:11] 2024-05-20 01:10:59,828 | INFO     | all data control threads have been joined
[2024-05-19 18:11:11] 2024-05-20 01:10:59,829 | INFO     | all job control threads have been joined
[2024-05-19 18:11:11] 2024-05-20 01:11:00,161 | INFO     | [job] retrieve thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:00,226 | INFO     | all payload control threads have been joined
[2024-05-19 18:11:11] 2024-05-20 01:11:00,335 | INFO     | [job] job monitor thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:00,351 | INFO     | [payload] failed_post thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:00,483 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:00,551 | INFO     | [data] copytool_in thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:00,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 18:11:11] 2024-05-20 01:11:00,834 | INFO     | [data] control thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:00,835 | INFO     | [job] control thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:00,903 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:01,029 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 18:11:11] 2024-05-20 01:11:01,064 | INFO     | [job] validate thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:01,076 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:01,163 | INFO     | [data] copytool_out thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:01,230 | INFO     | [payload] control thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:01,341 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:01,354 | INFO     | [payload] validate_post thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:01,671 | INFO     | [job] queue monitor thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:05,032 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 18:11:11] 2024-05-20 01:11:05,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370999535424)>', '<ExcThread(monitor, started 140370587408128)>']
[2024-05-19 18:11:11] 2024-05-20 01:11:06,189 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 18:11:11] 2024-05-20 01:11:06,189 | INFO     | [monitor] control thread has ended
[2024-05-19 18:11:11] 2024-05-20 01:11:10,267 | INFO     | all workflow threads have been joined
[2024-05-19 18:11:11] 2024-05-20 01:11:10,267 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 18:11:11] 2024-05-20 01:11:10,268 | INFO     | traces error code: 0
[2024-05-19 18:11:11] 2024-05-20 01:11:10,268 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 18:11:11] 2024-05-20 01:11:10,349 [wrapper] ==== pilot stdout END ====
[2024-05-19 18:11:11] 2024-05-20 01:11:10,354 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 18:11:11] 2024-05-20 01:11:10,366 [wrapper] pilotpid: 194100
[2024-05-19 18:11:11] 2024-05-20 01:11:10,370 [wrapper] Pilot exit status: 0
[2024-05-19 18:11:11] 2024-05-20 01:11:10,457 [wrapper] pandaids: 6209404043
[2024-05-19 18:11:11] 2024-05-20 01:11:10,586 [wrapper] cleanup: SIGTERM to supervisor_pilot 133848 194101
[2024-05-19 18:11:11] 2024-05-20 01:11:10,605 [wrapper] Test setup, not cleaning
[2024-05-19 18:11:11] 2024-05-20 01:11:10,608 [wrapper] ==== wrapper stdout END ====
[2024-05-19 18:11:11] 2024-05-20 01:11:10,611 [wrapper] ==== wrapper stderr END ====
[2024-05-19 18:11:11] 2024-05-20 01:11:10,616 [wrapper] apfmon messages muted
[2024-05-19 18:11:11]  *** Error codes and diagnostics ***
[2024-05-19 18:11:11]     "exeErrorCode": 0,
[2024-05-19 18:11:11]     "exeErrorDiag": "",
[2024-05-19 18:11:11]     "pilotErrorCode": 0,
[2024-05-19 18:11:11]     "pilotErrorDiag": "",
[2024-05-19 18:11:11]  *** Listing of results directory ***
[2024-05-19 18:11:11] total 834776
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc    467845 May 18 19:53 pilot3.tar.gz
[2024-05-19 18:11:11] -rwx------ 1 boinc boinc     32251 May 18 20:07 runpilot2-wrapper.sh
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc      5633 May 18 20:07 queuedata.json
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc       100 May 19 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 18:11:11] -rwxr-xr-x 1 boinc boinc      7986 May 19 13:12 run_atlas
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc       105 May 19 13:12 job.xml
[2024-05-19 18:11:11] -rw-r--r-- 2 boinc boinc 601917268 May 19 13:12 EVNT.38776119._000237.pool.root.1
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc      6619 May 19 13:12 init_data.xml
[2024-05-19 18:11:11] drwxrwx--x 2 boinc boinc      4096 May 19 13:12 shared
[2024-05-19 18:11:11] -rw-r--r-- 2 boinc boinc    480016 May 19 13:12 input.tar.gz
[2024-05-19 18:11:11] -rw-r--r-- 2 boinc boinc     17537 May 19 13:12 start_atlas.sh
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc         0 May 19 13:12 boinc_lockfile
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc      2633 May 19 13:12 pandaJob.out
[2024-05-19 18:11:11] -rw------- 1 boinc boinc       424 May 19 13:12 setup.sh.local
[2024-05-19 18:11:11] -rw------- 1 boinc boinc   1014069 May 19 13:12 agis_schedconf.cvmfs.json
[2024-05-19 18:11:11] -rw------- 1 boinc boinc   1324701 May 19 13:12 cric_ddmendpoints.json
[2024-05-19 18:11:11] drwx------ 4 boinc boinc      4096 May 19 13:12 pilot3
[2024-05-19 18:11:11] -rw------- 1 boinc boinc        95 May 19 18:10 pilot_heartbeat.json
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc       532 May 19 18:10 boinc_task_state.xml
[2024-05-19 18:11:11] -rw------- 1 boinc boinc 245633715 May 19 18:10 HITS.38776125._019432.pool.root.1
[2024-05-19 18:11:11] -rw------- 1 boinc boinc      1070 May 19 18:10 memory_monitor_summary.json
[2024-05-19 18:11:11] -rw------- 1 boinc boinc         0 May 19 18:10 agis_ddmendpoints.agis.ALL.json
[2024-05-19 18:11:11] -rw------- 1 boinc boinc    472134 May 19 18:10 log.38776125._019432.job.log.tgz.1
[2024-05-19 18:11:11] -rw------- 1 boinc boinc      7771 May 19 18:10 heartbeat.json
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc      8192 May 19 18:11 boinc_mmap_file
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc        28 May 19 18:11 wrapper_checkpoint.txt
[2024-05-19 18:11:11] -rw------- 1 boinc boinc      4333 May 19 18:11 pilotlog.txt
[2024-05-19 18:11:11] -rw------- 1 boinc boinc   1388775 May 19 18:11 log.38776125._019432.job.log.1
[2024-05-19 18:11:11] -rw------- 1 boinc boinc       357 May 19 18:11 output.list
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc       620 May 19 18:11 runtime_log
[2024-05-19 18:11:11] -rw------- 1 boinc boinc   1884160 May 19 18:11 result.tar.gz
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc     11287 May 19 18:11 runtime_log.err
[2024-05-19 18:11:11] -rw------- 1 boinc boinc       658 May 19 18:11 EtoMDmm4lS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmHUMKDm1xNZBo.diag
[2024-05-19 18:11:11] -rw-r--r-- 1 boinc boinc     21924 May 19 18:11 stderr.txt
[2024-05-19 18:11:11] HITS file was successfully produced:
[2024-05-19 18:11:11] -rw------- 1 boinc boinc 245633715 May 19 18:10 shared/HITS.pool.root.1
[2024-05-19 18:11:11]  *** Contents of shared directory: ***
[2024-05-19 18:11:11] total 830032
[2024-05-19 18:11:11] -rw-r--r-- 2 boinc boinc 601917268 May 19 13:12 ATLAS.root_0
[2024-05-19 18:11:11] -rw-r--r-- 2 boinc boinc    480016 May 19 13:12 input.tar.gz
[2024-05-19 18:11:11] -rw-r--r-- 2 boinc boinc     17537 May 19 13:12 start_atlas.sh
[2024-05-19 18:11:11] -rw------- 1 boinc boinc 245633715 May 19 18:10 HITS.pool.root.1
[2024-05-19 18:11:11] -rw------- 1 boinc boinc   1884160 May 19 18:11 result.tar.gz
18:11:13 (189887): run_atlas exited; CPU time 41918.147618
18:11:13 (189887): called boinc_finish(0)

</stderr_txt>
]]>

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