Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:22:35 (391961): wrapper (7.7.26015): starting
23:22:35 (391961): wrapper: running run_atlas (--nthreads 4)
[2024-05-25 23:22:35] Arguments: --nthreads 4
[2024-05-25 23:22:35] Threads: 4
[2024-05-25 23:22:35] Checking for CVMFS
[2024-05-25 23:22:35] No cvmfs_config command found, will try listing directly
[2024-05-25 23:22:35] CVMFS is ok
[2024-05-25 23:22:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-25 23:22:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-25 23:22:35] Further information can be found at the LHC@home message board.
[2024-05-25 23:22:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-25 23:22:35] Checking for apptainer binary...
[2024-05-25 23:22:35] which: no apptainer in ((null))
[2024-05-25 23:22:35] apptainer is not installed, using version from CVMFS
[2024-05-25 23:22:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-25 23:22:36] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-25 23:22:36] apptainer works
[2024-05-25 23:22:36] Set ATHENA_PROC_NUMBER=4
[2024-05-25 23:22:36] Set ATHENA_CORE_NUMBER=4
[2024-05-25 23:22:36] Starting ATLAS job with PandaID=6209384843
[2024-05-25 23:22:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-26 01:30:21]  *** The last 200 lines of the pilot log: ***
[2024-05-26 01:30:21] 2024-05-25 23:29:59,053 | INFO     | sum of square deviations: 535786790.0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,053 | INFO     | sum of deviations: 49723714460.00001
[2024-05-26 01:30:21] 2024-05-25 23:29:59,053 | INFO     | mean x: 1716675819.5
[2024-05-26 01:30:21] 2024-05-25 23:29:59,053 | INFO     | mean y: 2232735.35
[2024-05-26 01:30:21] 2024-05-25 23:29:59,053 | INFO     | -- intersect: -159313935304.561
[2024-05-26 01:30:21] 2024-05-25 23:29:59,053 | INFO     | intersect: -159313935304.561
[2024-05-26 01:30:21] 2024-05-25 23:29:59,053 | INFO     | chi2: 4.175126741619268
[2024-05-26 01:30:21] 2024-05-25 23:29:59,053 | INFO     | current chi2=4.175126741619268 (change=0.1788613391257829 %)
[2024-05-26 01:30:21] 2024-05-25 23:29:59,053 | INFO     | right removable region: 119
[2024-05-26 01:30:21] 2024-05-25 23:29:59,054 | INFO     | model: linear, x: [1716672495.0, 1716672556.0, 1716672617.0, 1716672678.0, 1716672739.0, 1716672800.0, 1716672861.0, 1716672922.0, 1716672983.0, 1716673044.0, 1716
[2024-05-26 01:30:21] 2024-05-25 23:29:59,054 | INFO     | sum of square deviations: 535786790.0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,054 | INFO     | sum of deviations: 23898081416.499996
[2024-05-26 01:30:21] 2024-05-25 23:29:59,054 | INFO     | mean x: 1716676124.5
[2024-05-26 01:30:21] 2024-05-25 23:29:59,054 | INFO     | mean y: 2298634.5416666665
[2024-05-26 01:30:21] 2024-05-25 23:29:59,054 | INFO     | -- intersect: -76567834401.14345
[2024-05-26 01:30:21] 2024-05-25 23:29:59,054 | INFO     | intersect: -76567834401.14345
[2024-05-26 01:30:21] 2024-05-25 23:29:59,054 | INFO     | chi2: 1.6779822366821286
[2024-05-26 01:30:21] 2024-05-25 23:29:59,054 | INFO     | current chi2=1.6779822366821286 (change=59.88191308095028 %)
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | model: linear, x: [1716672800.0, 1716672861.0, 1716672922.0, 1716672983.0, 1716673044.0, 1716673105.0, 1716673166.0, 1716673227.0, 1716673288.0, 1716673349.0, 1716
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | sum of square deviations: 471562330.0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | sum of deviations: 559253977.9999999
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | mean x: 1716676277.0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | mean y: 2354076.356521739
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | -- intersect: -2033555019.3731554
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | intersect: -2033555019.3731554
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | chi2: 0.07034964020033588
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | current chi2=0.07034964020033588 (change=95.80748599940854 %)
[2024-05-26 01:30:21] 2024-05-25 23:29:59,055 | INFO     | model: linear, x: [1716673105.0, 1716673166.0, 1716673227.0, 1716673288.0, 1716673349.0, 1716673410.0, 1716673471.0, 1716673532.0, 1716673593.0, 1716673654.0, 1716
[2024-05-26 01:30:21] 2024-05-25 23:29:59,056 | INFO     | sum of square deviations: 412686807.5
[2024-05-26 01:30:21] 2024-05-25 23:29:59,056 | INFO     | sum of deviations: -2806685548.500001
[2024-05-26 01:30:21] 2024-05-25 23:29:59,056 | INFO     | mean x: 1716676429.5
[2024-05-26 01:30:21] 2024-05-25 23:29:59,056 | INFO     | mean y: 2362628.5545454547
[2024-05-26 01:30:21] 2024-05-25 23:29:59,056 | INFO     | -- intersect: 11677489719.037638
[2024-05-26 01:30:21] 2024-05-25 23:29:59,056 | INFO     | intersect: 11677489719.037638
[2024-05-26 01:30:21] 2024-05-25 23:29:59,056 | INFO     | chi2: 0.007621347422267167
[2024-05-26 01:30:21] 2024-05-25 23:29:59,056 | INFO     | current chi2=0.007621347422267167 (change=89.16647277716883 %)
[2024-05-26 01:30:21] 2024-05-25 23:29:59,057 | INFO     | model: linear, x: [1716673410.0, 1716673471.0, 1716673532.0, 1716673593.0, 1716673654.0, 1716673715.0, 1716673776.0, 1716673837.0, 1716673898.0, 1716673959.0, 1716
[2024-05-26 01:30:21] 2024-05-25 23:29:59,057 | INFO     | sum of square deviations: 358927660.0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,057 | INFO     | sum of deviations: -2980961176.0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,057 | INFO     | mean x: 1716676582.0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,057 | INFO     | mean y: 2363105.3333333335
[2024-05-26 01:30:21] 2024-05-25 23:29:59,057 | INFO     | -- intersect: 14259682373.205809
[2024-05-26 01:30:21] 2024-05-25 23:29:59,057 | INFO     | intersect: 14259682373.205809
[2024-05-26 01:30:21] 2024-05-25 23:29:59,058 | INFO     | chi2: 0.006319352200380364
[2024-05-26 01:30:21] 2024-05-25 23:29:59,058 | INFO     | current chi2=0.006319352200380364 (change=17.083530637676812 %)
[2024-05-26 01:30:21] 2024-05-25 23:29:59,058 | INFO     | left removable region: 40
[2024-05-26 01:30:21] 2024-05-25 23:29:59,058 | INFO     | model: linear, x: [1716674630.0, 1716674691.0, 1716674752.0, 1716674813.0, 1716674874.0, 1716674935.0, 1716674996.0, 1716675057.0, 1716675118.0, 1716675179.0, 1716
[2024-05-26 01:30:21] 2024-05-25 23:29:59,058 | INFO     | sum of square deviations: 152858680.0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,059 | INFO     | sum of deviations: -75449619.00000006
[2024-05-26 01:30:21] 2024-05-25 23:29:59,059 | INFO     | mean x: 1716677009.0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,059 | INFO     | mean y: 2352476.0506329113
[2024-05-26 01:30:21] 2024-05-25 23:29:59,059 | INFO     | -- intersect: 849688239.2216198
[2024-05-26 01:30:21] 2024-05-25 23:29:59,059 | INFO     | intersect: 849688239.2216198
[2024-05-26 01:30:21] 2024-05-25 23:29:59,059 | INFO     | chi2: 0.001211827027110515
[2024-05-26 01:30:21] 2024-05-25 23:29:59,059 | INFO     | -- intersect: 849688239.2216198
[2024-05-26 01:30:21] 2024-05-25 23:29:59,059 | INFO     | current memory leak: -0.49 B/s (using 79 data points, chi2=0.00)
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | ..............................
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | . Timing measurements:
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | . get job = 0 s
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | . initial setup = 1 s
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | . payload setup = 5 s
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | . stage-in = 0 s
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | . payload execution = 7600 s
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | . stage-out = 0 s
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | . log creation = 0 s
[2024-05-26 01:30:21] 2024-05-25 23:29:59,060 | INFO     | ..............................
[2024-05-26 01:30:21] 2024-05-25 23:29:59,160 | INFO     | 
[2024-05-26 01:30:21] 2024-05-25 23:29:59,160 | INFO     | job summary report
[2024-05-26 01:30:21] 2024-05-25 23:29:59,160 | INFO     | --------------------------------------------------
[2024-05-26 01:30:21] 2024-05-25 23:29:59,160 | INFO     | PanDA job id: 6209384843
[2024-05-26 01:30:21] 2024-05-25 23:29:59,160 | INFO     | task id: 38776104
[2024-05-26 01:30:21] 2024-05-25 23:29:59,160 | INFO     | errors: (none)
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | pilot state: finished 
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | transexitcode: 0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | exeerrorcode: 0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | exeerrordiag: 
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | exitcode: 0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | exitmsg: OK
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | cpuconsumptiontime: 27697 s
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | nevents: 400
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | neventsw: 0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | pid: 406870
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | pgrp: 406870
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | corecount: 4
[2024-05-26 01:30:21] 2024-05-25 23:29:59,161 | INFO     | event service: False
[2024-05-26 01:30:21] 2024-05-25 23:29:59,162 | INFO     | sizes: {0: 2378625, 1: 2378824, 5: 2379030, 11: 2379086, 7610: 2415630, 7613: 2415630, 7619: 2415928}
[2024-05-26 01:30:21] 2024-05-25 23:29:59,162 | INFO     | --------------------------------------------------
[2024-05-26 01:30:21] 2024-05-25 23:29:59,162 | INFO     | 
[2024-05-26 01:30:21] 2024-05-25 23:29:59,162 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2024-05-26 01:30:21] 2024-05-25 23:29:59,276 | WARNING  | process 406870 is no longer using CPU - aborting
[2024-05-26 01:30:21] 2024-05-25 23:29:59,280 | INFO     | aborting job monitoring since job object (job id=6209384843) has expired
[2024-05-26 01:30:21] 2024-05-25 23:29:59,296 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,296 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,296 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,296 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,296 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,296 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | job 6209384843 has completed (purged errors)
[2024-05-26 01:30:21] 2024-05-25 23:29:59,297 | INFO     | overall cleanup function is called
[2024-05-26 01:30:21] 2024-05-25 23:30:00,304 | INFO     | --- collectZombieJob: --- 10, [406870]
[2024-05-26 01:30:21] 2024-05-25 23:30:00,305 | INFO     | zombie collector waiting for pid 406870
[2024-05-26 01:30:21] 2024-05-25 23:30:00,305 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-26 01:30:21] 2024-05-25 23:30:01,309 | INFO     | collected zombie processes
[2024-05-26 01:30:21] 2024-05-25 23:30:01,309 | INFO     | will now attempt to kill all subprocesses of pid=406870
[2024-05-26 01:30:21] 2024-05-25 23:30:01,511 | INFO     | process IDs to be killed: [406870] (in reverse order)
[2024-05-26 01:30:21] 2024-05-25 23:30:01,678 | WARNING  | found no corresponding commands to process id(s)
[2024-05-26 01:30:21] 2024-05-25 23:30:01,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-26 01:30:21] 2024-05-25 23:30:01,694 | INFO     | did not find any defunct processes belonging to 406870
[2024-05-26 01:30:21] 2024-05-25 23:30:01,707 | INFO     | did not find any defunct processes belonging to 406870
[2024-05-26 01:30:21] 2024-05-25 23:30:01,707 | INFO     | ready for new job
[2024-05-26 01:30:21] 2024-05-25 23:30:01,707 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-26 01:30:21] 2024-05-25 23:30:01,709 | INFO     | *************************************
[2024-05-26 01:30:21] 2024-05-25 23:30:01,709 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-26 01:30:21] 2024-05-25 23:30:01,709 | INFO     | *************************************
[2024-05-26 01:30:21] 2024-05-25 23:30:01,709 | INFO     | 
[2024-05-26 01:30:21] 2024-05-25 23:30:01,716 | INFO     | architecture information:
[2024-05-26 01:30:21] 2024-05-25 23:30:01,716 | INFO     | executing command: cat /etc/os-release
[2024-05-26 01:30:21] 2024-05-25 23:30:01,732 | INFO     | cat /etc/os-release:
[2024-05-26 01:30:21] NAME="CentOS Linux"
[2024-05-26 01:30:21] VERSION="7 (Core)"
[2024-05-26 01:30:21] ID="centos"
[2024-05-26 01:30:21] ID_LIKE="rhel fedora"
[2024-05-26 01:30:21] VERSION_ID="7"
[2024-05-26 01:30:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-26 01:30:21] ANSI_COLOR="0;31"
[2024-05-26 01:30:21] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-26 01:30:21] HOME_URL="https://www.centos.org/"
[2024-05-26 01:30:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-26 01:30:21] 
[2024-05-26 01:30:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-26 01:30:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-26 01:30:21] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-26 01:30:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-26 01:30:21] 
[2024-05-26 01:30:21] 2024-05-25 23:30:01,733 | INFO     | *************************************
[2024-05-26 01:30:21] 2024-05-25 23:30:02,235 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2024-05-26 01:30:21] 2024-05-25 23:30:02,263 | INFO     | sufficient remaining disk space (3259334918144 B)
[2024-05-26 01:30:21] 2024-05-25 23:30:02,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-26 01:30:21] 2024-05-25 23:30:02,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-26 01:30:21] 2024-05-25 23:30:02,263 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-26 01:30:21] 2024-05-25 23:30:02,264 | INFO     | found 0 job(s) in 20 queues
[2024-05-26 01:30:21] 2024-05-25 23:30:02,264 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-26 01:30:21] 2024-05-25 23:30:02,264 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-26 01:30:21] 2024-05-25 23:30:02,435 | INFO     | all job control threads have been joined
[2024-05-26 01:30:21] 2024-05-25 23:30:02,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-26 01:30:21] 2024-05-25 23:30:02,788 | INFO     | aborting loop
[2024-05-26 01:30:21] 2024-05-25 23:30:02,907 | INFO     | all data control threads have been joined
[2024-05-26 01:30:21] 2024-05-25 23:30:03,268 | INFO     | [job] retrieve thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:03,352 | INFO     | all payload control threads have been joined
[2024-05-26 01:30:21] 2024-05-25 23:30:03,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-26 01:30:21] 2024-05-25 23:30:03,440 | INFO     | [job] control thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:03,471 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-26 01:30:21] 2024-05-25 23:30:03,498 | INFO     | [payload] validate_post thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:03,712 | INFO     | [data] copytool_in thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:03,794 | INFO     | [job] job monitor thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:03,884 | INFO     | [payload] failed_post thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:03,909 | INFO     | [data] control thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:04,086 | INFO     | [job] validate thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:04,132 | INFO     | [payload] execute_payloads thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:04,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-26 01:30:21] 2024-05-25 23:30:04,212 | INFO     | [job] create_data_payload thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:04,234 | INFO     | [payload] validate_pre thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:04,358 | INFO     | [payload] control thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:05,175 | INFO     | [job] queue monitor thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:05,476 | INFO     | [data] copytool_out thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:07,365 | INFO     | [data] queue_monitor thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:12,408 | INFO     | job.realtimelogging is not enabled
[2024-05-26 01:30:21] 2024-05-25 23:30:13,409 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-26 01:30:21] 2024-05-25 23:30:15,288 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47082191164480)>', '<ExcThread(monitor, started 47082362414848)>']
[2024-05-26 01:30:21] 2024-05-25 23:30:15,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-26 01:30:21] 2024-05-25 23:30:15,316 | INFO     | [monitor] control thread has ended
[2024-05-26 01:30:21] 2024-05-25 23:30:20,310 | INFO     | all workflow threads have been joined
[2024-05-26 01:30:21] 2024-05-25 23:30:20,310 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-26 01:30:21] 2024-05-25 23:30:20,310 | INFO     | traces error code: 0
[2024-05-26 01:30:21] 2024-05-25 23:30:20,311 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-26 01:30:21] 2024-05-25 23:30:20,387 [wrapper] ==== pilot stdout END ====
[2024-05-26 01:30:21] 2024-05-25 23:30:20,390 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-26 01:30:21] 2024-05-25 23:30:20,392 [wrapper] pilotpid: 396625
[2024-05-26 01:30:21] 2024-05-25 23:30:20,395 [wrapper] Pilot exit status: 0
[2024-05-26 01:30:21] 2024-05-25 23:30:20,405 [wrapper] pandaids: 6209384843
[2024-05-26 01:30:21] 2024-05-25 23:30:20,496 [wrapper] cleanup: SIGTERM to supervisor_pilot 1196103 396626
[2024-05-26 01:30:21] 2024-05-25 23:30:20,498 [wrapper] Test setup, not cleaning
[2024-05-26 01:30:21] 2024-05-25 23:30:20,500 [wrapper] ==== wrapper stdout END ====
[2024-05-26 01:30:21] 2024-05-25 23:30:20,501 [wrapper] ==== wrapper stderr END ====
[2024-05-26 01:30:21] 2024-05-25 23:30:20,505 [wrapper] apfmon messages muted
[2024-05-26 01:30:21]  *** Error codes and diagnostics ***
[2024-05-26 01:30:21]     "exeErrorCode": 0,
[2024-05-26 01:30:21]     "exeErrorDiag": "",
[2024-05-26 01:30:21]     "pilotErrorCode": 0,
[2024-05-26 01:30:21]     "pilotErrorDiag": "",
[2024-05-26 01:30:21]  *** Listing of results directory ***
[2024-05-26 01:30:21] total 822176
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc    467845 May 19 04:27 pilot3.tar.gz
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc      5633 May 19 04:34 queuedata.json
[2024-05-26 01:30:21] -rwx------ 1 boinc boinc     32251 May 19 04:35 runpilot2-wrapper.sh
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc       100 May 25 22:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-26 01:30:21] -rwxr-xr-x 1 boinc boinc      7986 May 25 22:48 run_atlas
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc       105 May 25 22:48 job.xml
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc      6641 May 25 23:22 init_data.xml
[2024-05-26 01:30:21] -rw-r--r-- 2 boinc boinc 600724985 May 25 23:22 EVNT.38776100._000414.pool.root.1
[2024-05-26 01:30:21] drwxrwx--x 2 boinc boinc      4096 May 25 23:22 shared
[2024-05-26 01:30:21] -rw-r--r-- 2 boinc boinc    480013 May 25 23:22 input.tar.gz
[2024-05-26 01:30:21] -rw-r--r-- 2 boinc boinc     17537 May 25 23:22 start_atlas.sh
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc         0 May 25 23:22 boinc_lockfile
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc      2645 May 25 23:22 pandaJob.out
[2024-05-26 01:30:21] -rw------- 1 boinc boinc       424 May 25 23:22 setup.sh.local
[2024-05-26 01:30:21] -rw------- 1 boinc boinc   1010165 May 25 23:22 agis_schedconf.cvmfs.json
[2024-05-26 01:30:21] -rw------- 1 boinc boinc         0 May 25 23:22 agis_ddmendpoints.agis.ALL.json
[2024-05-26 01:30:21] -rw------- 1 boinc boinc   1317222 May 25 23:22 cric_ddmendpoints.json
[2024-05-26 01:30:21] drwx------ 4 boinc boinc      4096 May 25 23:22 pilot3
[2024-05-26 01:30:21] -rw------- 1 boinc boinc        95 May 26 01:29 pilot_heartbeat.json
[2024-05-26 01:30:21] -rw------- 1 boinc boinc 235514570 May 26 01:29 HITS.38776104._019713.pool.root.1
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc       530 May 26 01:29 boinc_task_state.xml
[2024-05-26 01:30:21] -rw------- 1 boinc boinc      1040 May 26 01:29 memory_monitor_summary.json
[2024-05-26 01:30:21] -rw------- 1 boinc boinc    285726 May 26 01:29 log.38776104._019713.job.log.tgz.1
[2024-05-26 01:30:21] -rw------- 1 boinc boinc      7716 May 26 01:29 heartbeat.json
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc      8192 May 26 01:30 boinc_mmap_file
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc        27 May 26 01:30 wrapper_checkpoint.txt
[2024-05-26 01:30:21] -rw------- 1 boinc boinc      4417 May 26 01:30 pilotlog.txt
[2024-05-26 01:30:21] -rw------- 1 boinc boinc    788876 May 26 01:30 log.38776104._019713.job.log.1
[2024-05-26 01:30:21] -rw------- 1 boinc boinc       357 May 26 01:30 output.list
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc       620 May 26 01:30 runtime_log
[2024-05-26 01:30:21] -rw------- 1 boinc boinc   1095680 May 26 01:30 result.tar.gz
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc     11409 May 26 01:30 runtime_log.err
[2024-05-26 01:30:21] -rw------- 1 boinc boinc       655 May 26 01:30 5ZnMDmNZlS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm4WTKDmfHHjgm.diag
[2024-05-26 01:30:21] -rw-r--r-- 1 boinc boinc     21259 May 26 01:30 stderr.txt
[2024-05-26 01:30:21] HITS file was successfully produced:
[2024-05-26 01:30:21] -rw------- 1 boinc boinc 235514570 May 26 01:29 shared/HITS.pool.root.1
[2024-05-26 01:30:21]  *** Contents of shared directory: ***
[2024-05-26 01:30:21] total 818216
[2024-05-26 01:30:21] -rw-r--r-- 2 boinc boinc 600724985 May 25 23:22 ATLAS.root_0
[2024-05-26 01:30:21] -rw-r--r-- 2 boinc boinc    480013 May 25 23:22 input.tar.gz
[2024-05-26 01:30:21] -rw-r--r-- 2 boinc boinc     17537 May 25 23:22 start_atlas.sh
[2024-05-26 01:30:21] -rw------- 1 boinc boinc 235514570 May 26 01:29 HITS.pool.root.1
[2024-05-26 01:30:21] -rw------- 1 boinc boinc   1095680 May 26 01:30 result.tar.gz
01:30:22 (391961): run_atlas exited; CPU time 27531.095738
01:30:22 (391961): called boinc_finish(0)

</stderr_txt>
]]>

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