Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
13:27:08 (74938): wrapper (7.7.26015): starting
13:27:08 (74938): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 13:27:08] Arguments: --nthreads 12
[2024-05-19 13:27:08] Threads: 12
[2024-05-19 13:27:08] Checking for CVMFS
[2024-05-19 13:27:08] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 13:27:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 13:27:08] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 13:27:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 13:27:08] 2.10.1.0 74323 186837 187408 132924 3 294 38719633 45568000 6343 130560 0 607214946 99.742 410246340 4211 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-19 13:27:08] CVMFS is ok
[2024-05-19 13:27:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 13:27:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 13:27:08] Further information can be found at the LHC@home message board.
[2024-05-19 13:27:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 13:27:08] Checking for apptainer binary...
[2024-05-19 13:27:08] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 13:27:08] Running /usr/bin/apptainer --version
[2024-05-19 13:27:08] apptainer version 1.1.8-1.el7
[2024-05-19 13:27:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 13:27:09] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0028.triumf.lcg
[2024-05-19 13:27:09] apptainer works
[2024-05-19 13:27:09] Set ATHENA_PROC_NUMBER=12
[2024-05-19 13:27:09] Set ATHENA_CORE_NUMBER=12
[2024-05-19 13:27:09] Starting ATLAS job with PandaID=6209293578
[2024-05-19 13:27:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 16:34:07]  *** The last 200 lines of the pilot log: ***
[2024-05-19 16:34:07] 2024-05-19 23:33:46,057 | INFO     | chi2: 3.563575935697895
[2024-05-19 16:34:07] 2024-05-19 23:33:46,057 | INFO     | current chi2=3.563575935697895 (change=32.224640347695704 %)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,057 | INFO     | model: linear, x: [1716151380.0, 1716151444.0, 1716151508.0, 1716151569.0, 1716151627.0, 1716151695.0, 1716151751.0, 1716151818.0, 1716151870.0, 1716151930.0, 1716
[2024-05-19 16:34:07] 2024-05-19 23:33:46,057 | INFO     | sum of square deviations: 1469407081.7857175
[2024-05-19 16:34:07] 2024-05-19 23:33:46,059 | INFO     | sum of deviations: 63965592408.571396
[2024-05-19 16:34:07] 2024-05-19 23:33:46,059 | INFO     | mean x: 1716156477.5357144
[2024-05-19 16:34:07] 2024-05-19 23:33:46,059 | INFO     | mean y: 2667901.404761905
[2024-05-19 16:34:07] 2024-05-19 23:33:46,059 | INFO     | -- intersect: -74704312289.52611
[2024-05-19 16:34:07] 2024-05-19 23:33:46,059 | INFO     | intersect: -74704312289.52611
[2024-05-19 16:34:07] 2024-05-19 23:33:46,059 | INFO     | chi2: 2.1739167707855636
[2024-05-19 16:34:07] 2024-05-19 23:33:46,060 | INFO     | current chi2=2.1739167707855636 (change=38.99619904241437 %)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,060 | INFO     | model: linear, x: [1716151695.0, 1716151751.0, 1716151818.0, 1716151870.0, 1716151930.0, 1716151992.0, 1716152077.0, 1716152114.0, 1716152178.0, 1716152235.0, 1716
[2024-05-19 16:34:07] 2024-05-19 23:33:46,060 | INFO     | sum of square deviations: 1341976591.6073666
[2024-05-19 16:34:07] 2024-05-19 23:33:46,061 | INFO     | sum of deviations: 28332407000.69938
[2024-05-19 16:34:07] 2024-05-19 23:33:46,061 | INFO     | mean x: 1716156630.0490797
[2024-05-19 16:34:07] 2024-05-19 23:33:46,061 | INFO     | mean y: 2710555.662576687
[2024-05-19 16:34:07] 2024-05-19 23:33:46,061 | INFO     | -- intersect: -36229551932.061356
[2024-05-19 16:34:07] 2024-05-19 23:33:46,062 | INFO     | intersect: -36229551932.061356
[2024-05-19 16:34:07] 2024-05-19 23:33:46,062 | INFO     | chi2: 0.8187299347105925
[2024-05-19 16:34:07] 2024-05-19 23:33:46,062 | INFO     | current chi2=0.8187299347105925 (change=62.338487576286674 %)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,062 | INFO     | model: linear, x: [1716151992.0, 1716152077.0, 1716152114.0, 1716152178.0, 1716152235.0, 1716152297.0, 1716152376.0, 1716152440.0, 1716152505.0, 1716152540.0, 1716
[2024-05-19 16:34:07] 2024-05-19 23:33:46,062 | INFO     | sum of square deviations: 1222240599.4936707
[2024-05-19 16:34:07] 2024-05-19 23:33:46,063 | INFO     | sum of deviations: 4743853325.443039
[2024-05-19 16:34:07] 2024-05-19 23:33:46,064 | INFO     | mean x: 1716156782.493671
[2024-05-19 16:34:07] 2024-05-19 23:33:46,064 | INFO     | mean y: 2740464.9430379746
[2024-05-19 16:34:07] 2024-05-19 23:33:46,064 | INFO     | -- intersect: -6658137976.655797
[2024-05-19 16:34:07] 2024-05-19 23:33:46,064 | INFO     | intersect: -6658137976.655797
[2024-05-19 16:34:07] 2024-05-19 23:33:46,064 | INFO     | chi2: 0.16995405507383018
[2024-05-19 16:34:07] 2024-05-19 23:33:46,064 | INFO     | current chi2=0.16995405507383018 (change=79.24174408818871 %)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,065 | INFO     | model: linear, x: [1716152297.0, 1716152376.0, 1716152440.0, 1716152505.0, 1716152540.0, 1716152601.0, 1716152666.0, 1716152723.0, 1716152791.0, 1716152844.0, 1716
[2024-05-19 16:34:07] 2024-05-19 23:33:46,065 | INFO     | sum of square deviations: 1109920887.1111088
[2024-05-19 16:34:07] 2024-05-19 23:33:46,066 | INFO     | sum of deviations: -4208344209.4444447
[2024-05-19 16:34:07] 2024-05-19 23:33:46,066 | INFO     | mean x: 1716156934.8888888
[2024-05-19 16:34:07] 2024-05-19 23:33:46,066 | INFO     | mean y: 2752520.4444444445
[2024-05-19 16:34:07] 2024-05-19 23:33:46,066 | INFO     | -- intersect: 6509683945.291669
[2024-05-19 16:34:07] 2024-05-19 23:33:46,066 | INFO     | intersect: 6509683945.291669
[2024-05-19 16:34:07] 2024-05-19 23:33:46,067 | INFO     | chi2: 0.04935428174582153
[2024-05-19 16:34:07] 2024-05-19 23:33:46,067 | INFO     | current chi2=0.04935428174582153 (change=70.96022114660259 %)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,067 | INFO     | model: linear, x: [1716152601.0, 1716152666.0, 1716152723.0, 1716152791.0, 1716152844.0, 1716152905.0, 1716152975.0, 1716153028.0, 1716153097.0, 1716153151.0, 1716
[2024-05-19 16:34:07] 2024-05-19 23:33:46,067 | INFO     | sum of square deviations: 1005058805.891893
[2024-05-19 16:34:07] 2024-05-19 23:33:46,068 | INFO     | sum of deviations: -994027702.945945
[2024-05-19 16:34:07] 2024-05-19 23:33:46,068 | INFO     | mean x: 1716157087.0270271
[2024-05-19 16:34:07] 2024-05-19 23:33:46,068 | INFO     | mean y: 2747850.9864864866
[2024-05-19 16:34:07] 2024-05-19 23:33:46,068 | INFO     | -- intersect: 1700069119.265959
[2024-05-19 16:34:07] 2024-05-19 23:33:46,069 | INFO     | intersect: 1700069119.265959
[2024-05-19 16:34:07] 2024-05-19 23:33:46,069 | INFO     | chi2: 0.038815430430820586
[2024-05-19 16:34:07] 2024-05-19 23:33:46,069 | INFO     | current chi2=0.038815430430820586 (change=21.353469126097032 %)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,069 | INFO     | left removable region: 70
[2024-05-19 16:34:07] 2024-05-19 23:33:46,069 | INFO     | model: linear, x: [1716154735.0, 1716154796.0, 1716154882.0, 1716154919.0, 1716154987.0, 1716155041.0, 1716155106.0, 1716155172.0, 1716155233.0, 1716155284.0, 1716
[2024-05-19 16:34:07] 2024-05-19 23:33:46,069 | INFO     | sum of square deviations: 379365581.19626105
[2024-05-19 16:34:07] 2024-05-19 23:33:46,070 | INFO     | sum of deviations: 339380728.88785034
[2024-05-19 16:34:07] 2024-05-19 23:33:46,070 | INFO     | mean x: 1716157972.317757
[2024-05-19 16:34:07] 2024-05-19 23:33:46,070 | INFO     | mean y: 2746287.5327102803
[2024-05-19 16:34:07] 2024-05-19 23:33:46,070 | INFO     | -- intersect: -1532529900.9272563
[2024-05-19 16:34:07] 2024-05-19 23:33:46,070 | INFO     | intersect: -1532529900.9272563
[2024-05-19 16:34:07] 2024-05-19 23:33:46,071 | INFO     | chi2: 7.463572613218467e-05
[2024-05-19 16:34:07] 2024-05-19 23:33:46,071 | INFO     | -- intersect: -1532529900.9272563
[2024-05-19 16:34:07] 2024-05-19 23:33:46,071 | INFO     | current memory leak: 0.89 B/s (using 107 data points, chi2=0.00)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | ..............................
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | . Timing measurements:
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | . get job = 0 s
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | . initial setup = 2 s
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | . payload setup = 5 s
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | . stage-in = 0 s
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | . payload execution = 11154 s
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | . stage-out = 1 s
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | . log creation = 0 s
[2024-05-19 16:34:07] 2024-05-19 23:33:46,072 | INFO     | ..............................
[2024-05-19 16:34:07] 2024-05-19 23:33:46,162 | INFO     | 
[2024-05-19 16:34:07] 2024-05-19 23:33:46,163 | INFO     | job summary report
[2024-05-19 16:34:07] 2024-05-19 23:33:46,163 | INFO     | --------------------------------------------------
[2024-05-19 16:34:07] 2024-05-19 23:33:46,163 | INFO     | PanDA job id: 6209293578
[2024-05-19 16:34:07] 2024-05-19 23:33:46,163 | INFO     | task id: 38776104
[2024-05-19 16:34:07] 2024-05-19 23:33:46,163 | INFO     | errors: (none)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,163 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 16:34:07] 2024-05-19 23:33:46,163 | INFO     | pilot state: finished 
[2024-05-19 16:34:07] 2024-05-19 23:33:46,163 | INFO     | transexitcode: 0
[2024-05-19 16:34:07] 2024-05-19 23:33:46,163 | INFO     | exeerrorcode: 0
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | exeerrordiag: 
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | exitcode: 0
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | exitmsg: OK
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | cpuconsumptiontime: 28389 s
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | nevents: 400
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | neventsw: 0
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | pid: 85497
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | pgrp: 85497
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | corecount: 12
[2024-05-19 16:34:07] 2024-05-19 23:33:46,164 | INFO     | event service: False
[2024-05-19 16:34:07] 2024-05-19 23:33:46,165 | INFO     | sizes: {0: 2392204, 1: 2392232, 6: 2392438, 11: 2392466, 11163: 2420901, 11165: 2430039, 11172: 2430153}
[2024-05-19 16:34:07] 2024-05-19 23:33:46,165 | INFO     | --------------------------------------------------
[2024-05-19 16:34:07] 2024-05-19 23:33:46,165 | INFO     | 
[2024-05-19 16:34:07] 2024-05-19 23:33:46,165 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 16:34:07] 2024-05-19 23:33:46,197 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,197 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,197 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,197 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,199 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,199 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 16:34:07] 2024-05-19 23:33:46,199 | INFO     | job 6209293578 has completed (purged errors)
[2024-05-19 16:34:07] 2024-05-19 23:33:46,199 | INFO     | overall cleanup function is called
[2024-05-19 16:34:07] 2024-05-19 23:33:47,206 | INFO     | --- collectZombieJob: --- 10, [85497]
[2024-05-19 16:34:07] 2024-05-19 23:33:47,207 | INFO     | zombie collector waiting for pid 85497
[2024-05-19 16:34:07] 2024-05-19 23:33:47,207 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 16:34:07] 2024-05-19 23:33:48,212 | INFO     | collected zombie processes
[2024-05-19 16:34:07] 2024-05-19 23:33:48,213 | INFO     | will now attempt to kill all subprocesses of pid=85497
[2024-05-19 16:34:07] 2024-05-19 23:33:48,335 | INFO     | process IDs to be killed: [85497] (in reverse order)
[2024-05-19 16:34:07] 2024-05-19 23:33:48,447 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 16:34:07] 2024-05-19 23:33:48,447 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 16:34:07] 2024-05-19 23:33:48,454 | INFO     | did not find any defunct processes belonging to 85497
[2024-05-19 16:34:07] 2024-05-19 23:33:48,459 | INFO     | did not find any defunct processes belonging to 85497
[2024-05-19 16:34:07] 2024-05-19 23:33:48,459 | INFO     | ready for new job
[2024-05-19 16:34:07] 2024-05-19 23:33:48,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 16:34:07] 2024-05-19 23:33:48,462 | INFO     | *************************************
[2024-05-19 16:34:07] 2024-05-19 23:33:48,462 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 16:34:07] 2024-05-19 23:33:48,462 | INFO     | *************************************
[2024-05-19 16:34:07] 2024-05-19 23:33:48,462 | INFO     | 
[2024-05-19 16:34:07] 2024-05-19 23:33:48,466 | INFO     | architecture information:
[2024-05-19 16:34:07] 2024-05-19 23:33:48,466 | INFO     | executing command: cat /etc/os-release
[2024-05-19 16:34:07] 2024-05-19 23:33:48,488 | INFO     | cat /etc/os-release:
[2024-05-19 16:34:07] NAME="CentOS Linux"
[2024-05-19 16:34:07] VERSION="7 (Core)"
[2024-05-19 16:34:07] ID="centos"
[2024-05-19 16:34:07] ID_LIKE="rhel fedora"
[2024-05-19 16:34:07] VERSION_ID="7"
[2024-05-19 16:34:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 16:34:07] ANSI_COLOR="0;31"
[2024-05-19 16:34:07] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 16:34:07] HOME_URL="https://www.centos.org/"
[2024-05-19 16:34:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 16:34:07] 
[2024-05-19 16:34:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 16:34:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 16:34:07] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 16:34:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 16:34:07] 
[2024-05-19 16:34:07] 2024-05-19 23:33:48,489 | INFO     | *************************************
[2024-05-19 16:34:07] 2024-05-19 23:33:48,992 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 16:34:07] 2024-05-19 23:33:49,019 | INFO     | sufficient remaining disk space (2211619799040 B)
[2024-05-19 16:34:07] 2024-05-19 23:33:49,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 16:34:07] 2024-05-19 23:33:49,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 16:34:07] 2024-05-19 23:33:49,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 16:34:07] 2024-05-19 23:33:49,021 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 16:34:07] 2024-05-19 23:33:49,021 | INFO     | aborting loop
[2024-05-19 16:34:07] 2024-05-19 23:33:49,022 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 16:34:07] 2024-05-19 23:33:49,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 16:34:07] 2024-05-19 23:33:49,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 16:34:07] 2024-05-19 23:33:49,584 | INFO     | all data control threads have been joined
[2024-05-19 16:34:07] 2024-05-19 23:33:49,591 | INFO     | all job control threads have been joined
[2024-05-19 16:34:07] 2024-05-19 23:33:49,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 16:34:07] 2024-05-19 23:33:49,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 16:34:07] 2024-05-19 23:33:50,026 | INFO     | [job] retrieve thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:50,027 | INFO     | [job] job monitor thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:50,399 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:50,465 | INFO     | all payload control threads have been joined
[2024-05-19 16:34:07] 2024-05-19 23:33:50,522 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:50,590 | INFO     | [data] control thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:50,598 | INFO     | [job] control thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:50,777 | INFO     | [job] validate thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:50,963 | INFO     | [data] copytool_in thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:51,174 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 16:34:07] 2024-05-19 23:33:51,266 | INFO     | [payload] validate_post thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:51,470 | INFO     | [payload] control thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:51,494 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:51,615 | INFO     | [payload] failed_post thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:51,896 | INFO     | [data] copytool_out thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:52,179 | INFO     | [job] queue monitor thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:53,964 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:33:59,863 | INFO     | job.realtimelogging is not enabled
[2024-05-19 16:34:07] 2024-05-19 23:34:00,870 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 16:34:07] 2024-05-19 23:34:01,898 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731669702464)>', '<ExcThread(monitor, started 139731249653504)>']
[2024-05-19 16:34:07] 2024-05-19 23:34:02,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 16:34:07] 2024-05-19 23:34:02,085 | INFO     | [monitor] control thread has ended
[2024-05-19 16:34:07] 2024-05-19 23:34:06,908 | INFO     | all workflow threads have been joined
[2024-05-19 16:34:07] 2024-05-19 23:34:06,909 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 16:34:07] 2024-05-19 23:34:06,909 | INFO     | traces error code: 0
[2024-05-19 16:34:07] 2024-05-19 23:34:06,910 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 16:34:07] 2024-05-19 23:34:07,013 [wrapper] ==== pilot stdout END ====
[2024-05-19 16:34:07] 2024-05-19 23:34:07,017 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 16:34:07] 2024-05-19 23:34:07,020 [wrapper] pilotpid: 79094
[2024-05-19 16:34:07] 2024-05-19 23:34:07,024 [wrapper] Pilot exit status: 0
[2024-05-19 16:34:07] 2024-05-19 23:34:07,034 [wrapper] pandaids: 6209293578
[2024-05-19 16:34:07] 2024-05-19 23:34:07,097 [wrapper] cleanup: SIGTERM to supervisor_pilot  31874 79095
[2024-05-19 16:34:07] 2024-05-19 23:34:07,101 [wrapper] Test setup, not cleaning
[2024-05-19 16:34:07] 2024-05-19 23:34:07,104 [wrapper] ==== wrapper stdout END ====
[2024-05-19 16:34:07] 2024-05-19 23:34:07,107 [wrapper] ==== wrapper stderr END ====
[2024-05-19 16:34:07] 2024-05-19 23:34:07,115 [wrapper] apfmon messages muted
[2024-05-19 16:34:07]  *** Error codes and diagnostics ***
[2024-05-19 16:34:07]     "exeErrorCode": 0,
[2024-05-19 16:34:07]     "exeErrorDiag": "",
[2024-05-19 16:34:07]     "pilotErrorCode": 0,
[2024-05-19 16:34:07]     "pilotErrorDiag": "",
[2024-05-19 16:34:07]  *** Listing of results directory ***
[2024-05-19 16:34:08] total 816960
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc    467845 May 18 17:17 pilot3.tar.gz
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc      5633 May 18 17:26 queuedata.json
[2024-05-19 16:34:08] -rwx------ 1 boinc boinc     32251 May 18 17:27 runpilot2-wrapper.sh
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc       100 May 19 13:27 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 16:34:08] -rwxr-xr-x 1 boinc boinc      7986 May 19 13:27 run_atlas
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc       105 May 19 13:27 job.xml
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc      6627 May 19 13:27 init_data.xml
[2024-05-19 16:34:08] -rw-r--r-- 2 boinc boinc 596928558 May 19 13:27 EVNT.38776100._000591.pool.root.1
[2024-05-19 16:34:08] -rw-r--r-- 2 boinc boinc     17537 May 19 13:27 start_atlas.sh
[2024-05-19 16:34:08] drwxrwx--x 2 boinc boinc      4096 May 19 13:27 shared
[2024-05-19 16:34:08] -rw-r--r-- 2 boinc boinc    480010 May 19 13:27 input.tar.gz
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc         0 May 19 13:27 boinc_lockfile
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc      2644 May 19 13:27 pandaJob.out
[2024-05-19 16:34:08] -rw------- 1 boinc boinc       424 May 19 13:27 setup.sh.local
[2024-05-19 16:34:08] -rw------- 1 boinc boinc   1013701 May 19 13:27 agis_schedconf.cvmfs.json
[2024-05-19 16:34:08] -rw------- 1 boinc boinc   1324701 May 19 13:27 cric_ddmendpoints.json
[2024-05-19 16:34:08] drwx------ 4 boinc boinc      4096 May 19 13:27 pilot3
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc       531 May 19 16:33 boinc_task_state.xml
[2024-05-19 16:34:08] -rw------- 1 boinc boinc 233548763 May 19 16:33 HITS.38776104._018956.pool.root.1
[2024-05-19 16:34:08] -rw------- 1 boinc boinc        95 May 19 16:33 pilot_heartbeat.json
[2024-05-19 16:34:08] -rw------- 1 boinc boinc      1067 May 19 16:33 memory_monitor_summary.json
[2024-05-19 16:34:08] -rw------- 1 boinc boinc         0 May 19 16:33 agis_ddmendpoints.agis.ALL.json
[2024-05-19 16:34:08] -rw------- 1 boinc boinc    402940 May 19 16:33 log.38776104._018956.job.log.tgz.1
[2024-05-19 16:34:08] -rw------- 1 boinc boinc      7767 May 19 16:33 heartbeat.json
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc      8192 May 19 16:34 boinc_mmap_file
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc        27 May 19 16:34 wrapper_checkpoint.txt
[2024-05-19 16:34:08] -rw------- 1 boinc boinc      4405 May 19 16:34 pilotlog.txt
[2024-05-19 16:34:08] -rw------- 1 boinc boinc    874859 May 19 16:34 log.38776104._018956.job.log.1
[2024-05-19 16:34:08] -rw------- 1 boinc boinc       357 May 19 16:34 output.list
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc       620 May 19 16:34 runtime_log
[2024-05-19 16:34:08] -rw------- 1 boinc boinc   1300480 May 19 16:34 result.tar.gz
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc     11287 May 19 16:34 runtime_log.err
[2024-05-19 16:34:08] -rw------- 1 boinc boinc       656 May 19 16:34 kkHNDm4ZjS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm2PTKDmzXBgjm.diag
[2024-05-19 16:34:08] -rw-r--r-- 1 boinc boinc     21975 May 19 16:34 stderr.txt
[2024-05-19 16:34:08] HITS file was successfully produced:
[2024-05-19 16:34:08] -rw------- 1 boinc boinc 233548763 May 19 16:33 shared/HITS.pool.root.1
[2024-05-19 16:34:08]  *** Contents of shared directory: ***
[2024-05-19 16:34:08] total 812788
[2024-05-19 16:34:08] -rw-r--r-- 2 boinc boinc 596928558 May 19 13:27 ATLAS.root_0
[2024-05-19 16:34:08] -rw-r--r-- 2 boinc boinc     17537 May 19 13:27 start_atlas.sh
[2024-05-19 16:34:08] -rw-r--r-- 2 boinc boinc    480010 May 19 13:27 input.tar.gz
[2024-05-19 16:34:08] -rw------- 1 boinc boinc 233548763 May 19 16:33 HITS.pool.root.1
[2024-05-19 16:34:08] -rw------- 1 boinc boinc   1300480 May 19 16:34 result.tar.gz
16:34:09 (74938): run_atlas exited; CPU time 28234.280055
16:34:09 (74938): called boinc_finish(0)

</stderr_txt>
]]>

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