Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
00:31:23 (170120): wrapper (7.7.26015): starting
00:31:23 (170120): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 00:31:24] Arguments: --nthreads 12
[2024-05-19 00:31:24] Threads: 12
[2024-05-19 00:31:24] Checking for CVMFS
[2024-05-19 00:31:24] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 00:31:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 00:31:24] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 00:31:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 00:31:24] 2.10.1.0 213836 186058 140660 132905 3 118 26474268 45568000 16436 130560 0 1045968837 99.764 636357030 17935 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-19 00:31:24] CVMFS is ok
[2024-05-19 00:31:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 00:31:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 00:31:24] Further information can be found at the LHC@home message board.
[2024-05-19 00:31:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 00:31:24] Checking for apptainer binary...
[2024-05-19 00:31:24] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 00:31:24] Running /usr/bin/apptainer --version
[2024-05-19 00:31:24] apptainer version 1.1.8-1.el7
[2024-05-19 00:31:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 00:31:26] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0101.triumf.lcg
[2024-05-19 00:31:26] apptainer works
[2024-05-19 00:31:26] Set ATHENA_PROC_NUMBER=12
[2024-05-19 00:31:26] Set ATHENA_CORE_NUMBER=12
[2024-05-19 00:31:26] Starting ATLAS job with PandaID=6209293570
[2024-05-19 00:31:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 01:38:19]  *** The last 200 lines of the pilot log: ***
[2024-05-19 01:38:19]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-19 01:38:19]  direct_access_lan=False
[2024-05-19 01:38:19]  direct_access_wan=False
[2024-05-19 01:38:19]  domain=
[2024-05-19 01:38:19]  filesize=370977
[2024-05-19 01:38:19]  filetype=log
[2024-05-19 01:38:19]  guid=0f03a4e2-7a5b-4542-97e0-fc93638df01b
[2024-05-19 01:38:19]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-19 01:38:19]  is_tar=False
[2024-05-19 01:38:19]  lfn=log.38776104._018948.job.log.tgz.1
[2024-05-19 01:38:19]  mtime=0
[2024-05-19 01:38:19]  protocol_id=None
[2024-05-19 01:38:19]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 01:38:19]  replicas=None
[2024-05-19 01:38:19]  scope=mc23_13p6TeV
[2024-05-19 01:38:19]  status=None
[2024-05-19 01:38:19]  status_code=0
[2024-05-19 01:38:19]  storage_token=
[2024-05-19 01:38:19]  surl=/home/boinc/slots/0/PanDA_Pilot-6209293570/log.38776104._018948.job.log.tgz.1
[2024-05-19 01:38:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/fd/log.38776104._018948.job.log.tgz.1
[2024-05-19 01:38:19]  workdir=None
[2024-05-19 01:38:19] ]
[2024-05-19 01:38:19] 2024-05-19 08:37:52,057 | INFO     | transferring file log.38776104._018948.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209293570/log.38776104._018948.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-19 01:38:19] 2024-05-19 08:37:52,057 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209293570/log.38776104._018948.job.log.tgz.1 /home/boinc/slots/0/log.38776104._018948.job.log.t
[2024-05-19 01:38:19] 2024-05-19 08:37:52,076 | INFO     | adding to output.list: log.38776104._018948.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ea/fd/log.38776104._018948.job.log.tg
[2024-05-19 01:38:19] 2024-05-19 08:37:52,077 | INFO     | summary of transferred files:
[2024-05-19 01:38:19] 2024-05-19 08:37:52,077 | INFO     |  -- lfn=log.38776104._018948.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 01:38:19] 2024-05-19 08:37:52,077 | INFO     | stage-out finished correctly
[2024-05-19 01:38:19] 2024-05-19 08:37:52,144 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 01:38:19] 2024-05-19 08:37:53,646 | INFO     | job 6209293570 has state=finished
[2024-05-19 01:38:19] 2024-05-19 08:37:53,647 | INFO     | preparing for final server update for job 6209293570 in state='finished'
[2024-05-19 01:38:19] 2024-05-19 08:37:53,648 | INFO     | this job has now completed (state=finished)
[2024-05-19 01:38:19] 2024-05-19 08:37:53,648 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 01:38:19] 2024-05-19 08:37:53,648 | INFO     | job 6209293570 has finished - writing final server update
[2024-05-19 01:38:19] 2024-05-19 08:37:53,648 | INFO     | total number of processed events: 400 (read)
[2024-05-19 01:38:19] 2024-05-19 08:37:53,654 | INFO     | executing command: lscpu
[2024-05-19 01:38:19] 2024-05-19 08:37:53,698 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-19 01:38:19] 2024-05-19 08:37:53,699 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 01:38:19] 2024-05-19 08:37:53,774 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 01:38:19] 2024-05-19 08:37:58,655 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 01:38:19] 2024-05-19 08:37:58,656 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209293570/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 01:38:19] 2024-05-19 08:37:58,661 | INFO     | extracted standard info from prmon json
[2024-05-19 01:38:19] 2024-05-19 08:37:58,661 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 01:38:19] 2024-05-19 08:37:58,661 | WARNING  | GPU info not found in prmon json
[2024-05-19 01:38:19] 2024-05-19 08:37:58,662 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 01:38:19] 2024-05-19 08:37:58,662 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 01:38:19] 2024-05-19 08:37:58,664 | INFO     | fitting pss+swap vs Time
[2024-05-19 01:38:19] 2024-05-19 08:37:58,664 | INFO     | model: linear, x: [1716104227.0, 1716104288.0, 1716104349.0, 1716104410.0, 1716104471.0, 1716104532.0, 1716104593.0, 1716104654.0, 1716104715.0, 1716104776.0, 1716
[2024-05-19 01:38:19] 2024-05-19 08:37:58,664 | INFO     | sum of square deviations: 60485984.4827586
[2024-05-19 01:38:19] 2024-05-19 08:37:58,664 | INFO     | sum of deviations: 17596129729.206898
[2024-05-19 01:38:19] 2024-05-19 08:37:58,665 | INFO     | mean x: 1716105965.5172415
[2024-05-19 01:38:19] 2024-05-19 08:37:58,665 | INFO     | mean y: 2620740.293103448
[2024-05-19 01:38:19] 2024-05-19 08:37:58,665 | INFO     | -- intersect: -499234077753.3023
[2024-05-19 01:38:19] 2024-05-19 08:37:58,665 | INFO     | intersect: -499234077753.3023
[2024-05-19 01:38:19] 2024-05-19 08:37:58,665 | INFO     | chi2: 2.102435309510207
[2024-05-19 01:38:19] 2024-05-19 08:37:58,665 | INFO     | -- intersect: -499234077753.3023
[2024-05-19 01:38:19] 2024-05-19 08:37:58,665 | INFO     | current memory leak: 290.91 B/s (using 58 data points, chi2=2.10)
[2024-05-19 01:38:19] 2024-05-19 08:37:58,665 | INFO     | ..............................
[2024-05-19 01:38:19] 2024-05-19 08:37:58,665 | INFO     | . Timing measurements:
[2024-05-19 01:38:19] 2024-05-19 08:37:58,666 | INFO     | . get job = 0 s
[2024-05-19 01:38:19] 2024-05-19 08:37:58,666 | INFO     | . initial setup = 2 s
[2024-05-19 01:38:19] 2024-05-19 08:37:58,666 | INFO     | . payload setup = 5 s
[2024-05-19 01:38:19] 2024-05-19 08:37:58,666 | INFO     | . stage-in = 0 s
[2024-05-19 01:38:19] 2024-05-19 08:37:58,666 | INFO     | . payload execution = 3950 s
[2024-05-19 01:38:19] 2024-05-19 08:37:58,666 | INFO     | . stage-out = 1 s
[2024-05-19 01:38:19] 2024-05-19 08:37:58,666 | INFO     | . log creation = 0 s
[2024-05-19 01:38:19] 2024-05-19 08:37:58,666 | INFO     | ..............................
[2024-05-19 01:38:19] 2024-05-19 08:37:58,734 | INFO     | 
[2024-05-19 01:38:19] 2024-05-19 08:37:58,734 | INFO     | job summary report
[2024-05-19 01:38:19] 2024-05-19 08:37:58,734 | INFO     | --------------------------------------------------
[2024-05-19 01:38:19] 2024-05-19 08:37:58,734 | INFO     | PanDA job id: 6209293570
[2024-05-19 01:38:19] 2024-05-19 08:37:58,734 | INFO     | task id: 38776104
[2024-05-19 01:38:19] 2024-05-19 08:37:58,734 | INFO     | errors: (none)
[2024-05-19 01:38:19] 2024-05-19 08:37:58,734 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | pilot state: finished 
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | transexitcode: 0
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | exeerrorcode: 0
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | exeerrordiag: 
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | exitcode: 0
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | exitmsg: OK
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | cpuconsumptiontime: 35281 s
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | nevents: 400
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | neventsw: 0
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | pid: 181205
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | pgrp: 181205
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | corecount: 12
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | event service: False
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | sizes: {0: 2392154, 1: 2392154, 5: 2392388, 11: 2392444, 3959: 2418284, 3960: 2427422, 3967: 2427536}
[2024-05-19 01:38:19] 2024-05-19 08:37:58,735 | INFO     | --------------------------------------------------
[2024-05-19 01:38:19] 2024-05-19 08:37:58,736 | INFO     | 
[2024-05-19 01:38:19] 2024-05-19 08:37:58,736 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 01:38:19] 2024-05-19 08:37:58,826 | WARNING  | process 181205 is no longer using CPU - aborting
[2024-05-19 01:38:19] 2024-05-19 08:37:58,826 | INFO     | aborting job monitoring since job object (job id=6209293570) has expired
[2024-05-19 01:38:19] 2024-05-19 08:37:58,853 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,853 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,853 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,853 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 01:38:19] 2024-05-19 08:37:58,854 | INFO     | job 6209293570 has completed (purged errors)
[2024-05-19 01:38:19] 2024-05-19 08:37:58,855 | INFO     | overall cleanup function is called
[2024-05-19 01:38:19] 2024-05-19 08:37:59,861 | INFO     | --- collectZombieJob: --- 10, [181205]
[2024-05-19 01:38:19] 2024-05-19 08:37:59,862 | INFO     | zombie collector waiting for pid 181205
[2024-05-19 01:38:19] 2024-05-19 08:37:59,862 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 01:38:19] 2024-05-19 08:38:00,868 | INFO     | collected zombie processes
[2024-05-19 01:38:19] 2024-05-19 08:38:00,869 | INFO     | will now attempt to kill all subprocesses of pid=181205
[2024-05-19 01:38:19] 2024-05-19 08:38:01,145 | INFO     | process IDs to be killed: [181205] (in reverse order)
[2024-05-19 01:38:19] 2024-05-19 08:38:01,305 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 01:38:19] 2024-05-19 08:38:01,306 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 01:38:19] 2024-05-19 08:38:01,317 | INFO     | did not find any defunct processes belonging to 181205
[2024-05-19 01:38:19] 2024-05-19 08:38:01,327 | INFO     | did not find any defunct processes belonging to 181205
[2024-05-19 01:38:19] 2024-05-19 08:38:01,327 | INFO     | ready for new job
[2024-05-19 01:38:19] 2024-05-19 08:38:01,327 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 01:38:19] 2024-05-19 08:38:01,329 | INFO     | *************************************
[2024-05-19 01:38:19] 2024-05-19 08:38:01,329 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 01:38:19] 2024-05-19 08:38:01,329 | INFO     | *************************************
[2024-05-19 01:38:19] 2024-05-19 08:38:01,329 | INFO     | 
[2024-05-19 01:38:19] 2024-05-19 08:38:01,333 | INFO     | architecture information:
[2024-05-19 01:38:19] 2024-05-19 08:38:01,334 | INFO     | executing command: cat /etc/os-release
[2024-05-19 01:38:19] 2024-05-19 08:38:01,350 | INFO     | cat /etc/os-release:
[2024-05-19 01:38:19] NAME="CentOS Linux"
[2024-05-19 01:38:19] VERSION="7 (Core)"
[2024-05-19 01:38:19] ID="centos"
[2024-05-19 01:38:19] ID_LIKE="rhel fedora"
[2024-05-19 01:38:19] VERSION_ID="7"
[2024-05-19 01:38:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 01:38:19] ANSI_COLOR="0;31"
[2024-05-19 01:38:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 01:38:19] HOME_URL="https://www.centos.org/"
[2024-05-19 01:38:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 01:38:19] 
[2024-05-19 01:38:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 01:38:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 01:38:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 01:38:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 01:38:19] 
[2024-05-19 01:38:19] 2024-05-19 08:38:01,351 | INFO     | *************************************
[2024-05-19 01:38:19] 2024-05-19 08:38:01,854 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 01:38:19] 2024-05-19 08:38:01,874 | INFO     | sufficient remaining disk space (1706302636032 B)
[2024-05-19 01:38:19] 2024-05-19 08:38:01,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 01:38:19] 2024-05-19 08:38:01,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 01:38:19] 2024-05-19 08:38:02,062 | INFO     | all payload control threads have been joined
[2024-05-19 01:38:19] 2024-05-19 08:38:02,163 | INFO     | all job control threads have been joined
[2024-05-19 01:38:19] 2024-05-19 08:38:02,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 01:38:19] 2024-05-19 08:38:02,339 | INFO     | aborting loop
[2024-05-19 01:38:19] 2024-05-19 08:38:02,400 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 01:38:19] 2024-05-19 08:38:02,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 01:38:19] 2024-05-19 08:38:02,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 01:38:19] 2024-05-19 08:38:02,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 01:38:19] 2024-05-19 08:38:02,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 01:38:19] 2024-05-19 08:38:02,866 | INFO     | all data control threads have been joined
[2024-05-19 01:38:19] 2024-05-19 08:38:02,882 | INFO     | [job] retrieve thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:03,068 | INFO     | [payload] control thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:03,169 | INFO     | [job] control thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:03,262 | INFO     | [payload] validate_post thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:03,344 | INFO     | [job] job monitor thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:03,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 01:38:19] 2024-05-19 08:38:03,797 | INFO     | [job] validate thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:03,867 | INFO     | [data] control thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:03,889 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:03,995 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:03,997 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:04,000 | INFO     | [data] copytool_in thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:04,036 | INFO     | [payload] failed_post thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:04,664 | INFO     | [data] copytool_out thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:04,751 | INFO     | [job] queue monitor thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:06,753 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:12,659 | INFO     | job.realtimelogging is not enabled
[2024-05-19 01:38:19] 2024-05-19 08:38:13,661 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 01:38:19] 2024-05-19 08:38:13,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140555179013952)>', '<ExcThread(monitor, started 140554966292224)>']
[2024-05-19 01:38:19] 2024-05-19 08:38:14,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 01:38:19] 2024-05-19 08:38:14,462 | INFO     | [monitor] control thread has ended
[2024-05-19 01:38:19] 2024-05-19 08:38:19,019 | INFO     | all workflow threads have been joined
[2024-05-19 01:38:19] 2024-05-19 08:38:19,020 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 01:38:19] 2024-05-19 08:38:19,020 | INFO     | traces error code: 0
[2024-05-19 01:38:19] 2024-05-19 08:38:19,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 01:38:19] 2024-05-19 08:38:19,116 [wrapper] ==== pilot stdout END ====
[2024-05-19 01:38:19] 2024-05-19 08:38:19,119 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 01:38:19] 2024-05-19 08:38:19,121 [wrapper] pilotpid: 174413
[2024-05-19 01:38:19] 2024-05-19 08:38:19,123 [wrapper] Pilot exit status: 0
[2024-05-19 01:38:19] 2024-05-19 08:38:19,133 [wrapper] pandaids: 6209293570
[2024-05-19 01:38:19] 2024-05-19 08:38:19,205 [wrapper] cleanup: SIGTERM to supervisor_pilot  76757 174414
[2024-05-19 01:38:19] 2024-05-19 08:38:19,209 [wrapper] Test setup, not cleaning
[2024-05-19 01:38:19] 2024-05-19 08:38:19,211 [wrapper] ==== wrapper stdout END ====
[2024-05-19 01:38:19] 2024-05-19 08:38:19,213 [wrapper] ==== wrapper stderr END ====
[2024-05-19 01:38:19] 2024-05-19 08:38:19,218 [wrapper] apfmon messages muted
[2024-05-19 01:38:19]  *** Error codes and diagnostics ***
[2024-05-19 01:38:19]     "exeErrorCode": 0,
[2024-05-19 01:38:19]     "exeErrorDiag": "",
[2024-05-19 01:38:19]     "pilotErrorCode": 0,
[2024-05-19 01:38:19]     "pilotErrorDiag": "",
[2024-05-19 01:38:19]  *** Listing of results directory ***
[2024-05-19 01:38:19] total 822064
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc    467845 May 18 17:17 pilot3.tar.gz
[2024-05-19 01:38:19] -rwx------ 1 boinc boinc     32251 May 18 17:26 runpilot2-wrapper.sh
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc      5633 May 18 17:26 queuedata.json
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc       100 May 19 00:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 01:38:19] -rwxr-xr-x 1 boinc boinc      7986 May 19 00:31 run_atlas
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc       105 May 19 00:31 job.xml
[2024-05-19 01:38:19] -rw-r--r-- 2 boinc boinc 604643652 May 19 00:31 EVNT.38776100._000590.pool.root.1
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc      6621 May 19 00:31 init_data.xml
[2024-05-19 01:38:19] -rw-r--r-- 2 boinc boinc     17537 May 19 00:31 start_atlas.sh
[2024-05-19 01:38:19] drwxrwx--x 2 boinc boinc      4096 May 19 00:31 shared
[2024-05-19 01:38:19] -rw-r--r-- 2 boinc boinc    480006 May 19 00:31 input.tar.gz
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc         0 May 19 00:31 boinc_lockfile
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc      2644 May 19 00:31 pandaJob.out
[2024-05-19 01:38:19] -rw------- 1 boinc boinc       424 May 19 00:31 setup.sh.local
[2024-05-19 01:38:19] -rw------- 1 boinc boinc   1013987 May 19 00:31 agis_schedconf.cvmfs.json
[2024-05-19 01:38:19] -rw------- 1 boinc boinc         0 May 19 00:31 agis_ddmendpoints.agis.ALL.json
[2024-05-19 01:38:19] -rw------- 1 boinc boinc   1324701 May 19 00:31 cric_ddmendpoints.json
[2024-05-19 01:38:19] drwx------ 4 boinc boinc      4096 May 19 00:31 pilot3
[2024-05-19 01:38:19] -rw------- 1 boinc boinc 232074881 May 19 01:37 HITS.38776104._018948.pool.root.1
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc       530 May 19 01:37 boinc_task_state.xml
[2024-05-19 01:38:19] -rw------- 1 boinc boinc        95 May 19 01:37 pilot_heartbeat.json
[2024-05-19 01:38:19] -rw------- 1 boinc boinc      1065 May 19 01:37 memory_monitor_summary.json
[2024-05-19 01:38:19] -rw------- 1 boinc boinc    370977 May 19 01:37 log.38776104._018948.job.log.tgz.1
[2024-05-19 01:38:19] -rw------- 1 boinc boinc      7790 May 19 01:37 heartbeat.json
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc      8192 May 19 01:38 boinc_mmap_file
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc        27 May 19 01:38 wrapper_checkpoint.txt
[2024-05-19 01:38:19] -rw------- 1 boinc boinc      4282 May 19 01:38 pilotlog.txt
[2024-05-19 01:38:19] -rw------- 1 boinc boinc    402336 May 19 01:38 log.38776104._018948.job.log.1
[2024-05-19 01:38:19] -rw------- 1 boinc boinc       357 May 19 01:38 output.list
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc       620 May 19 01:38 runtime_log
[2024-05-19 01:38:19] -rw------- 1 boinc boinc    788480 May 19 01:38 result.tar.gz
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc     11286 May 19 01:38 runtime_log.err
[2024-05-19 01:38:19] -rw------- 1 boinc boinc       652 May 19 01:38 0jqLDm6YjS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmvPTKDmSEFrJo.diag
[2024-05-19 01:38:19] -rw-r--r-- 1 boinc boinc     21268 May 19 01:38 stderr.txt
[2024-05-19 01:38:20] HITS file was successfully produced:
[2024-05-19 01:38:20] -rw------- 1 boinc boinc 232074881 May 19 01:37 shared/HITS.pool.root.1
[2024-05-19 01:38:20]  *** Contents of shared directory: ***
[2024-05-19 01:38:20] total 818384
[2024-05-19 01:38:20] -rw-r--r-- 2 boinc boinc 604643652 May 19 00:31 ATLAS.root_0
[2024-05-19 01:38:20] -rw-r--r-- 2 boinc boinc     17537 May 19 00:31 start_atlas.sh
[2024-05-19 01:38:20] -rw-r--r-- 2 boinc boinc    480006 May 19 00:31 input.tar.gz
[2024-05-19 01:38:20] -rw------- 1 boinc boinc 232074881 May 19 01:37 HITS.pool.root.1
[2024-05-19 01:38:20] -rw------- 1 boinc boinc    788480 May 19 01:38 result.tar.gz
01:38:21 (170120): run_atlas exited; CPU time 35079.618044
01:38:21 (170120): called boinc_finish(0)

</stderr_txt>
]]>

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