Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:59:56 (3042052): wrapper (7.7.26015): starting
15:59:56 (3042052): wrapper: running run_atlas (--nthreads 12)
[2024-05-20 15:59:56] Arguments: --nthreads 12
[2024-05-20 15:59:56] Threads: 12
[2024-05-20 15:59:56] Checking for CVMFS
[2024-05-20 15:59:56] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-20 15:59:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-20 15:59:56] Running cvmfs_config stat atlas.cern.ch
[2024-05-20 15:59:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-20 15:59:57] 2.11.3.0 11199 16091 110556 132951 0 188 44942124 46080000 867 130560 0 22644849 99.966 2397867 38191 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-20 15:59:57] CVMFS is ok
[2024-05-20 15:59:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 15:59:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 15:59:57] Further information can be found at the LHC@home message board.
[2024-05-20 15:59:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 15:59:57] Checking for apptainer binary...
[2024-05-20 15:59:57] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-20 15:59:57] Running /usr/bin/apptainer --version
[2024-05-20 15:59:57] apptainer version 1.3.1-1.el7
[2024-05-20 15:59:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 15:59:57] minis01.farm.particle.cz
[2024-05-20 15:59:57] apptainer works
[2024-05-20 15:59:57] Set ATHENA_PROC_NUMBER=12
[2024-05-20 15:59:57] Set ATHENA_CORE_NUMBER=12
[2024-05-20 15:59:57] Starting ATLAS job with PandaID=6209251232
[2024-05-20 15:59:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 17:06:48]  *** The last 200 lines of the pilot log: ***
[2024-05-20 17:06:48]  domain=
[2024-05-20 17:06:48]  filesize=362156
[2024-05-20 17:06:48]  filetype=log
[2024-05-20 17:06:48]  guid=cac3bc2a-b801-4647-90cf-ca11e225d506
[2024-05-20 17:06:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-20 17:06:48]  is_tar=False
[2024-05-20 17:06:48]  lfn=log.38776104._018166.job.log.tgz.1
[2024-05-20 17:06:48]  mtime=0
[2024-05-20 17:06:48]  protocol_id=None
[2024-05-20 17:06:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-20 17:06:48]  replicas=None
[2024-05-20 17:06:48]  scope=mc23_13p6TeV
[2024-05-20 17:06:48]  status=None
[2024-05-20 17:06:48]  status_code=0
[2024-05-20 17:06:48]  storage_token=
[2024-05-20 17:06:48]  surl=/scratch/.boinc/slots/0/PanDA_Pilot-6209251232/log.38776104._018166.job.log.tgz.1
[2024-05-20 17:06:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/0a/log.38776104._018166.job.log.tgz.1
[2024-05-20 17:06:48]  workdir=None
[2024-05-20 17:06:48] ]
[2024-05-20 17:06:48] 2024-05-20 15:06:19,278 | INFO     | transferring file log.38776104._018166.job.log.tgz.1 from /scratch/.boinc/slots/0/PanDA_Pilot-6209251232/log.38776104._018166.job.log.tgz.1 to /scratch/.boinc/slot
[2024-05-20 17:06:48] 2024-05-20 15:06:19,278 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/0/PanDA_Pilot-6209251232/log.38776104._018166.job.log.tgz.1 /scratch/.boinc/slots/0/log.38776104._018166.j
[2024-05-20 17:06:48] 2024-05-20 15:06:19,297 | INFO     | adding to output.list: log.38776104._018166.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f1/0a/log.38776104._018166.job.log.tg
[2024-05-20 17:06:48] 2024-05-20 15:06:19,298 | INFO     | summary of transferred files:
[2024-05-20 17:06:48] 2024-05-20 15:06:19,298 | INFO     |  -- lfn=log.38776104._018166.job.log.tgz.1, status_code=0, status=transferred
[2024-05-20 17:06:48] 2024-05-20 15:06:19,298 | INFO     | stage-out finished correctly
[2024-05-20 17:06:48] 2024-05-20 15:06:19,384 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-20 17:06:48] 2024-05-20 15:06:21,227 | INFO     | 3973s have passed since pilot start
[2024-05-20 17:06:48] 2024-05-20 15:06:21,534 | INFO     | monitor loop #316: job 0:6209251232 is in state 'finished'
[2024-05-20 17:06:48] 2024-05-20 15:06:21,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-20 17:06:48] 2024-05-20 15:06:21,634 | INFO     | job 6209251232 has state=finished
[2024-05-20 17:06:48] 2024-05-20 15:06:21,634 | INFO     | preparing for final server update for job 6209251232 in state='finished'
[2024-05-20 17:06:48] 2024-05-20 15:06:21,635 | INFO     | this job has now completed (state=finished)
[2024-05-20 17:06:48] 2024-05-20 15:06:21,635 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-20 17:06:48] 2024-05-20 15:06:21,636 | INFO     | job 6209251232 has finished - writing final server update
[2024-05-20 17:06:48] 2024-05-20 15:06:21,636 | INFO     | total number of processed events: 400 (read)
[2024-05-20 17:06:48] 2024-05-20 15:06:21,639 | INFO     | executing command: lscpu
[2024-05-20 17:06:48] 2024-05-20 15:06:21,677 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-05-20 17:06:48] 2024-05-20 15:06:21,678 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-20 17:06:48] 2024-05-20 15:06:21,734 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-20 17:06:48] 2024-05-20 15:06:24,037 | INFO     | monitor loop #317: job 0:6209251232 is in state 'finished'
[2024-05-20 17:06:48] 2024-05-20 15:06:24,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-20 17:06:48] 2024-05-20 15:06:26,479 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-20 17:06:48] 2024-05-20 15:06:26,480 | INFO     | using path: /scratch/.boinc/slots/0/PanDA_Pilot-6209251232/memory_monitor_summary.json (trf name=prmon)
[2024-05-20 17:06:48] 2024-05-20 15:06:26,481 | INFO     | extracted standard info from prmon json
[2024-05-20 17:06:48] 2024-05-20 15:06:26,481 | INFO     | extracted standard memory fields from prmon json
[2024-05-20 17:06:48] 2024-05-20 15:06:26,481 | WARNING  | GPU info not found in prmon json
[2024-05-20 17:06:48] 2024-05-20 15:06:26,481 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 17:06:48] 2024-05-20 15:06:26,482 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 17:06:48] 2024-05-20 15:06:26,483 | INFO     | fitting pss+swap vs Time
[2024-05-20 17:06:48] 2024-05-20 15:06:26,484 | INFO     | model: linear, x: [1716213943.0, 1716214004.0, 1716214065.0, 1716214126.0, 1716214187.0, 1716214248.0, 1716214309.0, 1716214370.0, 1716214431.0, 1716214492.0, 1716
[2024-05-20 17:06:48] 2024-05-20 15:06:26,484 | INFO     | sum of square deviations: 60482994.5
[2024-05-20 17:06:48] 2024-05-20 15:06:26,484 | INFO     | sum of deviations: 13776304416.0
[2024-05-20 17:06:48] 2024-05-20 15:06:26,484 | INFO     | mean x: 1716215681.5
[2024-05-20 17:06:48] 2024-05-20 15:06:26,484 | INFO     | mean y: 2603619.4827586208
[2024-05-20 17:06:48] 2024-05-20 15:06:26,484 | INFO     | -- intersect: -390902474201.30695
[2024-05-20 17:06:48] 2024-05-20 15:06:26,485 | INFO     | intersect: -390902474201.30695
[2024-05-20 17:06:48] 2024-05-20 15:06:26,485 | INFO     | chi2: 1.88487846002634
[2024-05-20 17:06:48] 2024-05-20 15:06:26,485 | INFO     | -- intersect: -390902474201.30695
[2024-05-20 17:06:48] 2024-05-20 15:06:26,485 | INFO     | current memory leak: 227.77 B/s (using 58 data points, chi2=1.88)
[2024-05-20 17:06:48] 2024-05-20 15:06:26,485 | INFO     | ..............................
[2024-05-20 17:06:48] 2024-05-20 15:06:26,486 | INFO     | . Timing measurements:
[2024-05-20 17:06:48] 2024-05-20 15:06:26,486 | INFO     | . get job = 0 s
[2024-05-20 17:06:48] 2024-05-20 15:06:26,486 | INFO     | . initial setup = 1 s
[2024-05-20 17:06:48] 2024-05-20 15:06:26,486 | INFO     | . payload setup = 7 s
[2024-05-20 17:06:48] 2024-05-20 15:06:26,486 | INFO     | . stage-in = 0 s
[2024-05-20 17:06:48] 2024-05-20 15:06:26,486 | INFO     | . payload execution = 3942 s
[2024-05-20 17:06:48] 2024-05-20 15:06:26,486 | INFO     | . stage-out = 0 s
[2024-05-20 17:06:48] 2024-05-20 15:06:26,486 | INFO     | . log creation = 0 s
[2024-05-20 17:06:48] 2024-05-20 15:06:26,486 | INFO     | ..............................
[2024-05-20 17:06:48] 2024-05-20 15:06:26,572 | INFO     | 
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | job summary report
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | --------------------------------------------------
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | PanDA job id: 6209251232
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | task id: 38776104
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | errors: (none)
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | pilot state: finished 
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | transexitcode: 0
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | exeerrorcode: 0
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | exeerrordiag: 
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | exitcode: 0
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | exitmsg: OK
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | cpuconsumptiontime: 38232 s
[2024-05-20 17:06:48] 2024-05-20 15:06:26,573 | INFO     | nevents: 400
[2024-05-20 17:06:48] 2024-05-20 15:06:26,574 | INFO     | neventsw: 0
[2024-05-20 17:06:48] 2024-05-20 15:06:26,574 | INFO     | pid: 3053752
[2024-05-20 17:06:48] 2024-05-20 15:06:26,574 | INFO     | pgrp: 3053752
[2024-05-20 17:06:48] 2024-05-20 15:06:26,574 | INFO     | corecount: 12
[2024-05-20 17:06:48] 2024-05-20 15:06:26,574 | INFO     | event service: False
[2024-05-20 17:06:48] 2024-05-20 15:06:26,574 | INFO     | sizes: {0: 2390745, 1: 2392282, 6: 2392488, 12: 2392516, 3952: 2418306, 3953: 2418305, 3954: 2427507, 3961: 2427621}
[2024-05-20 17:06:48] 2024-05-20 15:06:26,574 | INFO     | --------------------------------------------------
[2024-05-20 17:06:48] 2024-05-20 15:06:26,574 | INFO     | 
[2024-05-20 17:06:48] 2024-05-20 15:06:26,574 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2024-05-20 17:06:48] 2024-05-20 15:06:26,597 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,598 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,599 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,599 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 17:06:48] 2024-05-20 15:06:26,599 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,599 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 17:06:48] 2024-05-20 15:06:26,599 | INFO     | job 6209251232 has completed (purged errors)
[2024-05-20 17:06:48] 2024-05-20 15:06:26,599 | INFO     | overall cleanup function is called
[2024-05-20 17:06:48] 2024-05-20 15:06:27,606 | INFO     | --- collectZombieJob: --- 10, [3053752]
[2024-05-20 17:06:48] 2024-05-20 15:06:27,606 | INFO     | zombie collector waiting for pid 3053752
[2024-05-20 17:06:48] 2024-05-20 15:06:27,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 17:06:48] 2024-05-20 15:06:28,611 | INFO     | collected zombie processes
[2024-05-20 17:06:48] 2024-05-20 15:06:28,612 | INFO     | will now attempt to kill all subprocesses of pid=3053752
[2024-05-20 17:06:48] 2024-05-20 15:06:28,743 | INFO     | process IDs to be killed: [3053752] (in reverse order)
[2024-05-20 17:06:48] 2024-05-20 15:06:28,816 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 17:06:48] 2024-05-20 15:06:28,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 17:06:48] 2024-05-20 15:06:28,821 | INFO     | did not find any defunct processes belonging to 3053752
[2024-05-20 17:06:48] 2024-05-20 15:06:28,824 | INFO     | did not find any defunct processes belonging to 3053752
[2024-05-20 17:06:48] 2024-05-20 15:06:28,824 | INFO     | ready for new job
[2024-05-20 17:06:48] 2024-05-20 15:06:28,824 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 17:06:48] 2024-05-20 15:06:28,825 | INFO     | *************************************
[2024-05-20 17:06:48] 2024-05-20 15:06:28,825 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 17:06:48] 2024-05-20 15:06:28,825 | INFO     | *************************************
[2024-05-20 17:06:48] 2024-05-20 15:06:28,825 | INFO     | 
[2024-05-20 17:06:48] 2024-05-20 15:06:28,827 | INFO     | architecture information:
[2024-05-20 17:06:48] 2024-05-20 15:06:28,827 | INFO     | executing command: cat /etc/os-release
[2024-05-20 17:06:48] 2024-05-20 15:06:28,843 | INFO     | cat /etc/os-release:
[2024-05-20 17:06:48] NAME="CentOS Linux"
[2024-05-20 17:06:48] VERSION="7 (Core)"
[2024-05-20 17:06:48] ID="centos"
[2024-05-20 17:06:48] ID_LIKE="rhel fedora"
[2024-05-20 17:06:48] VERSION_ID="7"
[2024-05-20 17:06:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 17:06:48] ANSI_COLOR="0;31"
[2024-05-20 17:06:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 17:06:48] HOME_URL="https://www.centos.org/"
[2024-05-20 17:06:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 17:06:48] 
[2024-05-20 17:06:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 17:06:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 17:06:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 17:06:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 17:06:48] 
[2024-05-20 17:06:48] 2024-05-20 15:06:28,844 | INFO     | *************************************
[2024-05-20 17:06:48] 2024-05-20 15:06:29,347 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2024-05-20 17:06:48] 2024-05-20 15:06:29,365 | INFO     | sufficient remaining disk space (709761171456 B)
[2024-05-20 17:06:48] 2024-05-20 15:06:29,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 17:06:48] 2024-05-20 15:06:29,365 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 17:06:48] 2024-05-20 15:06:29,385 | INFO     | all job control threads have been joined
[2024-05-20 17:06:48] 2024-05-20 15:06:29,898 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 17:06:48] 2024-05-20 15:06:30,034 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 17:06:48] 2024-05-20 15:06:30,054 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 17:06:48] 2024-05-20 15:06:30,054 | INFO     | aborting loop
[2024-05-20 17:06:48] 2024-05-20 15:06:30,253 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 17:06:48] 2024-05-20 15:06:30,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 17:06:48] 2024-05-20 15:06:30,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 17:06:48] 2024-05-20 15:06:30,341 | INFO     | all data control threads have been joined
[2024-05-20 17:06:48] 2024-05-20 15:06:30,370 | INFO     | [job] retrieve thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:30,390 | INFO     | [job] control thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:30,483 | INFO     | all payload control threads have been joined
[2024-05-20 17:06:48] 2024-05-20 15:06:30,640 | INFO     | [payload] validate_post thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:30,643 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:31,060 | INFO     | [job] job monitor thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:31,292 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:31,326 | INFO     | [data] copytool_in thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:31,347 | INFO     | [data] control thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:31,487 | INFO     | [payload] failed_post thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:31,488 | INFO     | [payload] control thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:31,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 17:06:48] 2024-05-20 15:06:31,639 | INFO     | [job] validate thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:31,809 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:31,903 | INFO     | [data] copytool_out thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:32,589 | INFO     | [job] queue monitor thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:34,040 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:39,878 | INFO     | job.realtimelogging is not enabled
[2024-05-20 17:06:48] 2024-05-20 15:06:40,884 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 17:06:48] 2024-05-20 15:06:42,732 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627878844224)>', '<ExcThread(monitor, started 139627373524736)>']
[2024-05-20 17:06:48] 2024-05-20 15:06:43,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 17:06:48] 2024-05-20 15:06:43,316 | INFO     | [monitor] control thread has ended
[2024-05-20 17:06:48] 2024-05-20 15:06:47,757 | INFO     | all workflow threads have been joined
[2024-05-20 17:06:48] 2024-05-20 15:06:47,758 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 17:06:48] 2024-05-20 15:06:47,758 | INFO     | traces error code: 0
[2024-05-20 17:06:48] 2024-05-20 15:06:47,758 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 17:06:48] 2024-05-20 15:06:47,850 [wrapper] ==== pilot stdout END ====
[2024-05-20 17:06:48] 2024-05-20 15:06:47,853 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 17:06:48] 2024-05-20 15:06:47,856 [wrapper] pilotpid: 3046946
[2024-05-20 17:06:48] 2024-05-20 15:06:47,859 [wrapper] Pilot exit status: 0
[2024-05-20 17:06:48] 2024-05-20 15:06:47,868 [wrapper] pandaids: 6209251232
[2024-05-20 17:06:48] 2024-05-20 15:06:47,926 [wrapper] cleanup: SIGTERM to supervisor_pilot 3104890 3046947
[2024-05-20 17:06:48] 2024-05-20 15:06:47,929 [wrapper] Test setup, not cleaning
[2024-05-20 17:06:48] 2024-05-20 15:06:47,932 [wrapper] ==== wrapper stdout END ====
[2024-05-20 17:06:48] 2024-05-20 15:06:47,935 [wrapper] ==== wrapper stderr END ====
[2024-05-20 17:06:48] 2024-05-20 15:06:47,940 [wrapper] apfmon messages muted
[2024-05-20 17:06:48]  *** Error codes and diagnostics ***
[2024-05-20 17:06:48]     "exeErrorCode": 0,
[2024-05-20 17:06:48]     "exeErrorDiag": "",
[2024-05-20 17:06:48]     "pilotErrorCode": 0,
[2024-05-20 17:06:48]     "pilotErrorDiag": "",
[2024-05-20 17:06:48]  *** Listing of results directory ***
[2024-05-20 17:06:48] total 818148
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc    467845 May 19 00:21 pilot3.tar.gz
[2024-05-20 17:06:48] -rwx------ 1 boinc boinc     32251 May 19 00:34 runpilot2-wrapper.sh
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc      5633 May 19 00:35 queuedata.json
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc       100 May 20 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 17:06:48] -rwxr-xr-x 1 boinc boinc      7986 May 20 15:59 run_atlas
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc       105 May 20 15:59 job.xml
[2024-05-20 17:06:48] -rw-r--r-- 2 boinc boinc     17537 May 20 15:59 start_atlas.sh
[2024-05-20 17:06:48] drwxrwx--x 2 boinc boinc      4096 May 20 15:59 shared
[2024-05-20 17:06:48] -rw-r--r-- 2 boinc boinc    480012 May 20 15:59 input.tar.gz
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc      6528 May 20 15:59 init_data.xml
[2024-05-20 17:06:48] -rw-r--r-- 2 boinc boinc 602511702 May 20 15:59 EVNT.38776100._000380.pool.root.1
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc         0 May 20 15:59 boinc_lockfile
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc      2642 May 20 15:59 pandaJob.out
[2024-05-20 17:06:48] -rw------- 1 boinc boinc       424 May 20 15:59 setup.sh.local
[2024-05-20 17:06:48] -rw------- 1 boinc boinc   1013965 May 20 16:00 agis_schedconf.cvmfs.json
[2024-05-20 17:06:48] -rw------- 1 boinc boinc         0 May 20 16:00 agis_ddmendpoints.agis.ALL.json
[2024-05-20 17:06:48] -rw------- 1 boinc boinc   1324701 May 20 16:00 cric_ddmendpoints.json
[2024-05-20 17:06:48] drwx------ 4 boinc boinc      4096 May 20 16:00 pilot3
[2024-05-20 17:06:48] -rw------- 1 boinc boinc 230197503 May 20 17:05 HITS.38776104._018166.pool.root.1
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc       531 May 20 17:06 boinc_task_state.xml
[2024-05-20 17:06:48] -rw------- 1 boinc boinc      1029 May 20 17:06 memory_monitor_summary.json
[2024-05-20 17:06:48] -rw------- 1 boinc boinc    362156 May 20 17:06 log.38776104._018166.job.log.tgz.1
[2024-05-20 17:06:48] -rw------- 1 boinc boinc        95 May 20 17:06 pilot_heartbeat.json
[2024-05-20 17:06:48] -rw------- 1 boinc boinc      7707 May 20 17:06 heartbeat.json
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc        27 May 20 17:06 wrapper_checkpoint.txt
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc      8192 May 20 17:06 boinc_mmap_file
[2024-05-20 17:06:48] -rw------- 1 boinc boinc      4285 May 20 17:06 pilotlog.txt
[2024-05-20 17:06:48] -rw------- 1 boinc boinc    411938 May 20 17:06 log.38776104._018166.job.log.1
[2024-05-20 17:06:48] -rw------- 1 boinc boinc       357 May 20 17:06 output.list
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc       620 May 20 17:06 runtime_log
[2024-05-20 17:06:48] -rw------- 1 boinc boinc    788480 May 20 17:06 result.tar.gz
[2024-05-20 17:06:48] -rw------- 1 boinc boinc       657 May 20 17:06 vEEMDmrohS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmHTaKDm8SoVBo.diag
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc     11064 May 20 17:06 runtime_log.err
[2024-05-20 17:06:48] -rw-r--r-- 1 boinc boinc     21213 May 20 17:06 stderr.txt
[2024-05-20 17:06:48] HITS file was successfully produced:
[2024-05-20 17:06:48] -rw------- 1 boinc boinc 230197503 May 20 17:05 shared/HITS.pool.root.1
[2024-05-20 17:06:48]  *** Contents of shared directory: ***
[2024-05-20 17:06:48] total 814468
[2024-05-20 17:06:48] -rw-r--r-- 2 boinc boinc     17537 May 20 15:59 start_atlas.sh
[2024-05-20 17:06:48] -rw-r--r-- 2 boinc boinc    480012 May 20 15:59 input.tar.gz
[2024-05-20 17:06:48] -rw-r--r-- 2 boinc boinc 602511702 May 20 15:59 ATLAS.root_0
[2024-05-20 17:06:48] -rw------- 1 boinc boinc 230197503 May 20 17:05 HITS.pool.root.1
[2024-05-20 17:06:48] -rw------- 1 boinc boinc    788480 May 20 17:06 result.tar.gz
17:06:49 (3042052): run_atlas exited; CPU time 37980.651866
17:06:49 (3042052): called boinc_finish(0)

</stderr_txt>
]]>

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