Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
02:29:48 (53701): wrapper (7.7.26015): starting
02:29:48 (53701): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 02:29:48] Arguments: --nthreads 12
[2024-05-19 02:29:48] Threads: 12
[2024-05-19 02:29:48] Checking for CVMFS
[2024-05-19 02:29:49] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 02:29:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 02:29:49] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 02:29:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 02:29:49] 2.10.1.0 2812 174922 148720 132908 0 326 42477331 45568001 26288 130560 0 1098236391 99.752 692880143 18283 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-19 02:29:49] CVMFS is ok
[2024-05-19 02:29:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 02:29:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 02:29:49] Further information can be found at the LHC@home message board.
[2024-05-19 02:29:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 02:29:49] Checking for apptainer binary...
[2024-05-19 02:29:49] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 02:29:49] Running /usr/bin/apptainer --version
[2024-05-19 02:29:49] apptainer version 1.1.8-1.el7
[2024-05-19 02:29:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 02:29:51] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0073.triumf.lcg
[2024-05-19 02:29:51] apptainer works
[2024-05-19 02:29:51] Set ATHENA_PROC_NUMBER=12
[2024-05-19 02:29:51] Set ATHENA_CORE_NUMBER=12
[2024-05-19 02:29:51] Starting ATLAS job with PandaID=6209250568
[2024-05-19 02:29:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 03:44:13]  *** The last 200 lines of the pilot log: ***
[2024-05-19 03:44:13]  is_tar=False
[2024-05-19 03:44:13]  lfn=log.38776104._018023.job.log.tgz.1
[2024-05-19 03:44:13]  mtime=0
[2024-05-19 03:44:13]  protocol_id=None
[2024-05-19 03:44:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 03:44:13]  replicas=None
[2024-05-19 03:44:13]  scope=mc23_13p6TeV
[2024-05-19 03:44:13]  status=None
[2024-05-19 03:44:13]  status_code=0
[2024-05-19 03:44:13]  storage_token=
[2024-05-19 03:44:13]  surl=/home/boinc/slots/0/PanDA_Pilot-6209250568/log.38776104._018023.job.log.tgz.1
[2024-05-19 03:44:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/73/log.38776104._018023.job.log.tgz.1
[2024-05-19 03:44:13]  workdir=None
[2024-05-19 03:44:13] ]
[2024-05-19 03:44:13] 2024-05-19 10:43:44,380 | INFO     | transferring file log.38776104._018023.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209250568/log.38776104._018023.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-19 03:44:13] 2024-05-19 10:43:44,380 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209250568/log.38776104._018023.job.log.tgz.1 /home/boinc/slots/0/log.38776104._018023.job.log.t
[2024-05-19 03:44:13] 2024-05-19 10:43:44,405 | INFO     | adding to output.list: log.38776104._018023.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/14/73/log.38776104._018023.job.log.tg
[2024-05-19 03:44:13] 2024-05-19 10:43:44,406 | INFO     | summary of transferred files:
[2024-05-19 03:44:13] 2024-05-19 10:43:44,406 | INFO     |  -- lfn=log.38776104._018023.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 03:44:13] 2024-05-19 10:43:44,406 | INFO     | stage-out finished correctly
[2024-05-19 03:44:13] 2024-05-19 10:43:44,808 | INFO     | monitor loop #309: job 0:6209250568 is in state 'finished'
[2024-05-19 03:44:13] 2024-05-19 10:43:44,809 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 03:44:13] 2024-05-19 10:43:46,809 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 03:44:13] 2024-05-19 10:43:47,317 | INFO     | monitor loop #310: job 0:6209250568 is in state 'finished'
[2024-05-19 03:44:13] 2024-05-19 10:43:47,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 03:44:13] 2024-05-19 10:43:48,086 | INFO     | job 6209250568 has state=finished
[2024-05-19 03:44:13] 2024-05-19 10:43:48,086 | INFO     | preparing for final server update for job 6209250568 in state='finished'
[2024-05-19 03:44:13] 2024-05-19 10:43:48,396 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-19 03:44:13] 2024-05-19 10:43:48,397 | INFO     | this job has now completed (state=finished)
[2024-05-19 03:44:13] 2024-05-19 10:43:48,397 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 03:44:13] 2024-05-19 10:43:48,397 | INFO     | job 6209250568 has finished - writing final server update
[2024-05-19 03:44:13] 2024-05-19 10:43:48,397 | INFO     | total number of processed events: 400 (read)
[2024-05-19 03:44:13] 2024-05-19 10:43:48,403 | INFO     | executing command: lscpu
[2024-05-19 03:44:13] 2024-05-19 10:43:48,462 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-19 03:44:13] 2024-05-19 10:43:48,462 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 03:44:13] 2024-05-19 10:43:48,507 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 03:44:13] 2024-05-19 10:43:49,821 | INFO     | monitor loop #311: job 0:6209250568 is in state 'finished'
[2024-05-19 03:44:13] 2024-05-19 10:43:49,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 03:44:13] 2024-05-19 10:43:51,800 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 03:44:13] 2024-05-19 10:43:51,800 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209250568/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 03:44:13] 2024-05-19 10:43:51,801 | INFO     | extracted standard info from prmon json
[2024-05-19 03:44:13] 2024-05-19 10:43:51,801 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 03:44:13] 2024-05-19 10:43:51,801 | WARNING  | GPU info not found in prmon json
[2024-05-19 03:44:13] 2024-05-19 10:43:51,802 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 03:44:13] 2024-05-19 10:43:51,802 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 03:44:13] 2024-05-19 10:43:51,803 | INFO     | fitting pss+swap vs Time
[2024-05-19 03:44:13] 2024-05-19 10:43:51,803 | INFO     | model: linear, x: [1716111335.0, 1716111396.0, 1716111457.0, 1716111518.0, 1716111579.0, 1716111640.0, 1716111701.0, 1716111762.0, 1716111823.0, 1716111884.0, 1716
[2024-05-19 03:44:13] 2024-05-19 10:43:51,804 | INFO     | sum of square deviations: 85135642.46153864
[2024-05-19 03:44:13] 2024-05-19 10:43:51,804 | INFO     | sum of deviations: 18968430278.76923
[2024-05-19 03:44:13] 2024-05-19 10:43:51,804 | INFO     | mean x: 1716113287.1538463
[2024-05-19 03:44:13] 2024-05-19 10:43:51,804 | INFO     | mean y: 2596232.923076923
[2024-05-19 03:44:13] 2024-05-19 10:43:51,804 | INFO     | -- intersect: -382351659830.31244
[2024-05-19 03:44:13] 2024-05-19 10:43:51,804 | INFO     | intersect: -382351659830.31244
[2024-05-19 03:44:13] 2024-05-19 10:43:51,804 | INFO     | chi2: 2.0281969514169376
[2024-05-19 03:44:13] 2024-05-19 10:43:51,804 | INFO     | -- intersect: -382351659830.31244
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | current memory leak: 222.80 B/s (using 65 data points, chi2=2.03)
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | ..............................
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | . Timing measurements:
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | . get job = 0 s
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | . initial setup = 1 s
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | . payload setup = 7 s
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | . stage-in = 0 s
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | . payload execution = 4393 s
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | . stage-out = 0 s
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | . log creation = 0 s
[2024-05-19 03:44:13] 2024-05-19 10:43:51,805 | INFO     | ..............................
[2024-05-19 03:44:13] 2024-05-19 10:43:51,871 | INFO     | 
[2024-05-19 03:44:13] 2024-05-19 10:43:51,871 | INFO     | job summary report
[2024-05-19 03:44:13] 2024-05-19 10:43:51,871 | INFO     | --------------------------------------------------
[2024-05-19 03:44:13] 2024-05-19 10:43:51,871 | INFO     | PanDA job id: 6209250568
[2024-05-19 03:44:13] 2024-05-19 10:43:51,871 | INFO     | task id: 38776104
[2024-05-19 03:44:13] 2024-05-19 10:43:51,871 | INFO     | errors: (none)
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | pilot state: finished 
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | transexitcode: 0
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | exeerrorcode: 0
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | exeerrordiag: 
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | exitcode: 0
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | exitmsg: OK
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | cpuconsumptiontime: 28902 s
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | nevents: 400
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | neventsw: 0
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | pid: 70917
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | pgrp: 70917
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | corecount: 12
[2024-05-19 03:44:13] 2024-05-19 10:43:51,872 | INFO     | event service: False
[2024-05-19 03:44:13] 2024-05-19 10:43:51,873 | INFO     | sizes: {0: 2392244, 4: 2392450, 11: 2392478, 4404: 2418470, 4406: 2427424, 4408: 2427480, 4413: 2427778}
[2024-05-19 03:44:13] 2024-05-19 10:43:51,873 | INFO     | --------------------------------------------------
[2024-05-19 03:44:13] 2024-05-19 10:43:51,873 | INFO     | 
[2024-05-19 03:44:13] 2024-05-19 10:43:51,873 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 03:44:13] 2024-05-19 10:43:51,902 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,903 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,903 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,903 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,903 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,905 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,905 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 03:44:13] 2024-05-19 10:43:51,905 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,905 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 03:44:13] 2024-05-19 10:43:51,905 | INFO     | job 6209250568 has completed (purged errors)
[2024-05-19 03:44:13] 2024-05-19 10:43:51,905 | INFO     | overall cleanup function is called
[2024-05-19 03:44:13] 2024-05-19 10:43:52,914 | INFO     | --- collectZombieJob: --- 10, [70917]
[2024-05-19 03:44:13] 2024-05-19 10:43:52,914 | INFO     | zombie collector waiting for pid 70917
[2024-05-19 03:44:13] 2024-05-19 10:43:52,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 03:44:13] 2024-05-19 10:43:53,917 | INFO     | collected zombie processes
[2024-05-19 03:44:13] 2024-05-19 10:43:53,918 | INFO     | will now attempt to kill all subprocesses of pid=70917
[2024-05-19 03:44:13] 2024-05-19 10:43:54,069 | INFO     | process IDs to be killed: [70917] (in reverse order)
[2024-05-19 03:44:13] 2024-05-19 10:43:54,204 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 03:44:13] 2024-05-19 10:43:54,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 03:44:13] 2024-05-19 10:43:54,214 | INFO     | did not find any defunct processes belonging to 70917
[2024-05-19 03:44:13] 2024-05-19 10:43:54,223 | INFO     | did not find any defunct processes belonging to 70917
[2024-05-19 03:44:13] 2024-05-19 10:43:54,223 | INFO     | ready for new job
[2024-05-19 03:44:13] 2024-05-19 10:43:54,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 03:44:13] 2024-05-19 10:43:54,225 | INFO     | *************************************
[2024-05-19 03:44:13] 2024-05-19 10:43:54,225 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 03:44:13] 2024-05-19 10:43:54,225 | INFO     | *************************************
[2024-05-19 03:44:13] 2024-05-19 10:43:54,225 | INFO     | 
[2024-05-19 03:44:13] 2024-05-19 10:43:54,228 | INFO     | architecture information:
[2024-05-19 03:44:13] 2024-05-19 10:43:54,229 | INFO     | executing command: cat /etc/os-release
[2024-05-19 03:44:13] 2024-05-19 10:43:54,244 | INFO     | cat /etc/os-release:
[2024-05-19 03:44:13] NAME="CentOS Linux"
[2024-05-19 03:44:13] VERSION="7 (Core)"
[2024-05-19 03:44:13] ID="centos"
[2024-05-19 03:44:13] ID_LIKE="rhel fedora"
[2024-05-19 03:44:13] VERSION_ID="7"
[2024-05-19 03:44:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 03:44:13] ANSI_COLOR="0;31"
[2024-05-19 03:44:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 03:44:13] HOME_URL="https://www.centos.org/"
[2024-05-19 03:44:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 03:44:13] 
[2024-05-19 03:44:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 03:44:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 03:44:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 03:44:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 03:44:13] 
[2024-05-19 03:44:13] 2024-05-19 10:43:54,244 | INFO     | *************************************
[2024-05-19 03:44:13] 2024-05-19 10:43:54,748 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 03:44:13] 2024-05-19 10:43:54,772 | INFO     | sufficient remaining disk space (1871011905536 B)
[2024-05-19 03:44:13] 2024-05-19 10:43:54,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 03:44:13] 2024-05-19 10:43:54,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 03:44:13] 2024-05-19 10:43:54,774 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 03:44:13] 2024-05-19 10:43:54,774 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 03:44:13] 2024-05-19 10:43:54,774 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 03:44:13] 2024-05-19 10:43:54,774 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 03:44:13] 2024-05-19 10:43:54,790 | INFO     | all job control threads have been joined
[2024-05-19 03:44:13] 2024-05-19 10:43:54,833 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 03:44:13] 2024-05-19 10:43:54,834 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 03:44:13] 2024-05-19 10:43:54,834 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 03:44:13] 2024-05-19 10:43:54,834 | INFO     | will abort loop
[2024-05-19 03:44:13] 2024-05-19 10:43:54,952 | INFO     | all payload control threads have been joined
[2024-05-19 03:44:13] 2024-05-19 10:43:54,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 03:44:13] 2024-05-19 10:43:55,259 | INFO     | all data control threads have been joined
[2024-05-19 03:44:13] 2024-05-19 10:43:55,779 | INFO     | [job] retrieve thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:55,796 | INFO     | [job] control thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:55,831 | INFO     | [data] copytool_in thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:55,832 | INFO     | [job] validate thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:55,833 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:55,839 | INFO     | [job] job monitor thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:55,957 | INFO     | [payload] control thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:55,983 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:56,032 | INFO     | [payload] failed_post thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:56,265 | INFO     | [data] control thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:56,639 | INFO     | [payload] validate_post thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:56,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 03:44:13] 2024-05-19 10:43:56,974 | INFO     | [data] copytool_out thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:57,105 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:43:57,407 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 03:44:13] 2024-05-19 10:43:57,885 | INFO     | [job] queue monitor thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:44:01,413 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:44:05,223 | INFO     | job.realtimelogging is not enabled
[2024-05-19 03:44:13] 2024-05-19 10:44:06,228 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 03:44:13] 2024-05-19 10:44:07,061 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375321171776)>', '<ExcThread(monitor, started 140375116842752)>']
[2024-05-19 03:44:13] 2024-05-19 10:44:07,828 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 03:44:13] 2024-05-19 10:44:07,828 | INFO     | [monitor] control thread has ended
[2024-05-19 03:44:13] 2024-05-19 10:44:12,087 | INFO     | all workflow threads have been joined
[2024-05-19 03:44:13] 2024-05-19 10:44:12,087 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 03:44:13] 2024-05-19 10:44:12,088 | INFO     | traces error code: 0
[2024-05-19 03:44:13] 2024-05-19 10:44:12,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 03:44:13] 2024-05-19 10:44:12,211 [wrapper] ==== pilot stdout END ====
[2024-05-19 03:44:13] 2024-05-19 10:44:12,216 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 03:44:13] 2024-05-19 10:44:12,220 [wrapper] pilotpid: 57968
[2024-05-19 03:44:13] 2024-05-19 10:44:12,224 [wrapper] Pilot exit status: 0
[2024-05-19 03:44:13] 2024-05-19 10:44:12,235 [wrapper] pandaids: 6209250568
[2024-05-19 03:44:13] 2024-05-19 10:44:12,321 [wrapper] cleanup: SIGTERM to supervisor_pilot 267800 57969
[2024-05-19 03:44:13] 2024-05-19 10:44:12,326 [wrapper] Test setup, not cleaning
[2024-05-19 03:44:13] 2024-05-19 10:44:12,328 [wrapper] ==== wrapper stdout END ====
[2024-05-19 03:44:13] 2024-05-19 10:44:12,331 [wrapper] ==== wrapper stderr END ====
[2024-05-19 03:44:13] 2024-05-19 10:44:12,338 [wrapper] apfmon messages muted
[2024-05-19 03:44:13]  *** Error codes and diagnostics ***
[2024-05-19 03:44:13]     "exeErrorCode": 0,
[2024-05-19 03:44:13]     "exeErrorDiag": "",
[2024-05-19 03:44:13]     "pilotErrorCode": 0,
[2024-05-19 03:44:13]     "pilotErrorDiag": "",
[2024-05-19 03:44:13]  *** Listing of results directory ***
[2024-05-19 03:44:13] total 822008
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc    467845 May 18 14:59 pilot3.tar.gz
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc      5633 May 18 15:11 queuedata.json
[2024-05-19 03:44:13] -rwx------ 1 boinc boinc     32251 May 18 15:12 runpilot2-wrapper.sh
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc       100 May 19 02:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 03:44:13] -rwxr-xr-x 1 boinc boinc      7986 May 19 02:29 run_atlas
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc       105 May 19 02:29 job.xml
[2024-05-19 03:44:13] -rw-r--r-- 2 boinc boinc 600245194 May 19 02:29 EVNT.38776100._000015.pool.root.1
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc      6626 May 19 02:29 init_data.xml
[2024-05-19 03:44:13] -rw-r--r-- 2 boinc boinc     17537 May 19 02:29 start_atlas.sh
[2024-05-19 03:44:13] drwxrwx--x 2 boinc boinc      4096 May 19 02:29 shared
[2024-05-19 03:44:13] -rw-r--r-- 2 boinc boinc    480002 May 19 02:29 input.tar.gz
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc         0 May 19 02:29 boinc_lockfile
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc      2639 May 19 02:29 pandaJob.out
[2024-05-19 03:44:13] -rw------- 1 boinc boinc       424 May 19 02:29 setup.sh.local
[2024-05-19 03:44:13] -rw------- 1 boinc boinc   1014061 May 19 02:30 agis_schedconf.cvmfs.json
[2024-05-19 03:44:13] -rw------- 1 boinc boinc         0 May 19 02:30 agis_ddmendpoints.agis.ALL.json
[2024-05-19 03:44:13] -rw------- 1 boinc boinc   1324701 May 19 02:30 cric_ddmendpoints.json
[2024-05-19 03:44:13] drwx------ 4 boinc boinc      4096 May 19 02:30 pilot3
[2024-05-19 03:44:13] -rw------- 1 boinc boinc 236413265 May 19 03:43 HITS.38776104._018023.pool.root.1
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc       530 May 19 03:43 boinc_task_state.xml
[2024-05-19 03:44:13] -rw------- 1 boinc boinc        95 May 19 03:43 pilot_heartbeat.json
[2024-05-19 03:44:13] -rw------- 1 boinc boinc      1068 May 19 03:43 memory_monitor_summary.json
[2024-05-19 03:44:13] -rw------- 1 boinc boinc    367553 May 19 03:43 log.38776104._018023.job.log.tgz.1
[2024-05-19 03:44:13] -rw------- 1 boinc boinc      7788 May 19 03:43 heartbeat.json
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc        27 May 19 03:44 wrapper_checkpoint.txt
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc      8192 May 19 03:44 boinc_mmap_file
[2024-05-19 03:44:13] -rw------- 1 boinc boinc      4591 May 19 03:44 pilotlog.txt
[2024-05-19 03:44:13] -rw------- 1 boinc boinc    406660 May 19 03:44 log.38776104._018023.job.log.1
[2024-05-19 03:44:13] -rw------- 1 boinc boinc       357 May 19 03:44 output.list
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc       620 May 19 03:44 runtime_log
[2024-05-19 03:44:13] -rw------- 1 boinc boinc    788480 May 19 03:44 result.tar.gz
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc     11286 May 19 03:44 runtime_log.err
[2024-05-19 03:44:13] -rw------- 1 boinc boinc       654 May 19 03:44 Ol0LDmlShS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmGHTKDmS97rKo.diag
[2024-05-19 03:44:13] -rw-r--r-- 1 boinc boinc     21895 May 19 03:44 stderr.txt
[2024-05-19 03:44:13] HITS file was successfully produced:
[2024-05-19 03:44:13] -rw------- 1 boinc boinc 236413265 May 19 03:43 shared/HITS.pool.root.1
[2024-05-19 03:44:13]  *** Contents of shared directory: ***
[2024-05-19 03:44:13] total 818328
[2024-05-19 03:44:13] -rw-r--r-- 2 boinc boinc 600245194 May 19 02:29 ATLAS.root_0
[2024-05-19 03:44:13] -rw-r--r-- 2 boinc boinc     17537 May 19 02:29 start_atlas.sh
[2024-05-19 03:44:13] -rw-r--r-- 2 boinc boinc    480002 May 19 02:29 input.tar.gz
[2024-05-19 03:44:13] -rw------- 1 boinc boinc 236413265 May 19 03:43 HITS.pool.root.1
[2024-05-19 03:44:13] -rw------- 1 boinc boinc    788480 May 19 03:44 result.tar.gz
03:44:15 (53701): run_atlas exited; CPU time 28740.125186
03:44:15 (53701): called boinc_finish(0)

</stderr_txt>
]]>

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