Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
04:55:42 (106213): wrapper (7.7.26015): starting
04:55:42 (106213): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 04:55:42] Arguments: --nthreads 12
[2024-05-19 04:55:42] Threads: 12
[2024-05-19 04:55:42] Checking for CVMFS
[2024-05-19 04:55:42] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 04:55:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 04:55:42] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 04:55:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 04:55:42] 2.10.1.0 152792 186322 164912 132912 0 402 37059402 45568001 10283 130560 0 1213547695 99.764 751698396 15902 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-19 04:55:42] CVMFS is ok
[2024-05-19 04:55:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 04:55:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 04:55:42] Further information can be found at the LHC@home message board.
[2024-05-19 04:55:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 04:55:42] Checking for apptainer binary...
[2024-05-19 04:55:42] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 04:55:42] Running /usr/bin/apptainer --version
[2024-05-19 04:55:42] apptainer version 1.1.8-1.el7
[2024-05-19 04:55:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 04:55:44] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0064.triumf.lcg
[2024-05-19 04:55:44] apptainer works
[2024-05-19 04:55:44] Set ATHENA_PROC_NUMBER=12
[2024-05-19 04:55:44] Set ATHENA_CORE_NUMBER=12
[2024-05-19 04:55:44] Starting ATLAS job with PandaID=6209206910
[2024-05-19 04:55:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 06:13:39]  *** The last 200 lines of the pilot log: ***
[2024-05-19 06:13:39]  domain=
[2024-05-19 06:13:39]  filesize=364188
[2024-05-19 06:13:39]  filetype=log
[2024-05-19 06:13:39]  guid=d2e1d49e-d81b-4e4f-b210-1ad8047c0959
[2024-05-19 06:13:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-19 06:13:39]  is_tar=False
[2024-05-19 06:13:39]  lfn=log.38776125._019168.job.log.tgz.1
[2024-05-19 06:13:39]  mtime=0
[2024-05-19 06:13:39]  protocol_id=None
[2024-05-19 06:13:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 06:13:39]  replicas=None
[2024-05-19 06:13:39]  scope=mc23_13p6TeV
[2024-05-19 06:13:39]  status=None
[2024-05-19 06:13:39]  status_code=0
[2024-05-19 06:13:39]  storage_token=
[2024-05-19 06:13:39]  surl=/home/boinc/slots/0/PanDA_Pilot-6209206910/log.38776125._019168.job.log.tgz.1
[2024-05-19 06:13:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/66/log.38776125._019168.job.log.tgz.1
[2024-05-19 06:13:39]  workdir=None
[2024-05-19 06:13:39] ]
[2024-05-19 06:13:39] 2024-05-19 13:13:16,249 | INFO     | transferring file log.38776125._019168.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209206910/log.38776125._019168.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-19 06:13:39] 2024-05-19 13:13:16,250 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209206910/log.38776125._019168.job.log.tgz.1 /home/boinc/slots/0/log.38776125._019168.job.log.t
[2024-05-19 06:13:39] 2024-05-19 13:13:16,263 | INFO     | adding to output.list: log.38776125._019168.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/66/log.38776125._019168.job.log.tg
[2024-05-19 06:13:39] 2024-05-19 13:13:16,264 | INFO     | summary of transferred files:
[2024-05-19 06:13:39] 2024-05-19 13:13:16,264 | INFO     |  -- lfn=log.38776125._019168.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 06:13:39] 2024-05-19 13:13:16,264 | INFO     | stage-out finished correctly
[2024-05-19 06:13:39] 2024-05-19 13:13:16,793 | INFO     | monitor loop #342: job 0:6209206910 is in state 'finished'
[2024-05-19 06:13:39] 2024-05-19 13:13:16,794 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 06:13:39] 2024-05-19 13:13:17,411 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 06:13:39] 2024-05-19 13:13:19,297 | INFO     | monitor loop #343: job 0:6209206910 is in state 'finished'
[2024-05-19 06:13:39] 2024-05-19 13:13:19,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 06:13:39] 2024-05-19 13:13:20,180 | INFO     | job 6209206910 has state=finished
[2024-05-19 06:13:39] 2024-05-19 13:13:20,181 | INFO     | preparing for final server update for job 6209206910 in state='finished'
[2024-05-19 06:13:39] 2024-05-19 13:13:20,181 | INFO     | this job has now completed (state=finished)
[2024-05-19 06:13:39] 2024-05-19 13:13:20,181 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 06:13:39] 2024-05-19 13:13:20,181 | INFO     | job 6209206910 has finished - writing final server update
[2024-05-19 06:13:39] 2024-05-19 13:13:20,182 | INFO     | total number of processed events: 400 (read)
[2024-05-19 06:13:39] 2024-05-19 13:13:20,186 | INFO     | executing command: lscpu
[2024-05-19 06:13:39] 2024-05-19 13:13:20,223 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-19 06:13:39] 2024-05-19 13:13:20,224 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 06:13:39] 2024-05-19 13:13:20,258 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 06:13:39] 2024-05-19 13:13:21,799 | INFO     | monitor loop #344: job 0:6209206910 is in state 'finished'
[2024-05-19 06:13:39] 2024-05-19 13:13:21,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 06:13:39] 2024-05-19 13:13:23,207 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 06:13:39] 2024-05-19 13:13:23,208 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209206910/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 06:13:39] 2024-05-19 13:13:23,208 | INFO     | extracted standard info from prmon json
[2024-05-19 06:13:39] 2024-05-19 13:13:23,209 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 06:13:39] 2024-05-19 13:13:23,209 | WARNING  | GPU info not found in prmon json
[2024-05-19 06:13:39] 2024-05-19 13:13:23,209 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 06:13:39] 2024-05-19 13:13:23,209 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 06:13:39] 2024-05-19 13:13:23,210 | INFO     | fitting pss+swap vs Time
[2024-05-19 06:13:39] 2024-05-19 13:13:23,210 | INFO     | model: linear, x: [1716120081.0, 1716120142.0, 1716120203.0, 1716120264.0, 1716120325.0, 1716120386.0, 1716120447.0, 1716120508.0, 1716120569.0, 1716120630.0, 1716
[2024-05-19 06:13:39] 2024-05-19 13:13:23,210 | INFO     | sum of square deviations: 101875387.24637675
[2024-05-19 06:13:39] 2024-05-19 13:13:23,210 | INFO     | sum of deviations: 19466524535.898552
[2024-05-19 06:13:39] 2024-05-19 13:13:23,210 | INFO     | mean x: 1716122155.1594203
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | mean y: 2612261.4637681157
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | -- intersect: -327916966186.05853
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | intersect: -327916966186.05853
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | chi2: 2.1648923098052832
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | -- intersect: -327916966186.05853
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | current memory leak: 191.08 B/s (using 69 data points, chi2=2.16)
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | ..............................
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | . Timing measurements:
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | . get job = 0 s
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | . initial setup = 1 s
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | . payload setup = 4 s
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | . stage-in = 0 s
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | . payload execution = 4620 s
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | . stage-out = 0 s
[2024-05-19 06:13:39] 2024-05-19 13:13:23,211 | INFO     | . log creation = 0 s
[2024-05-19 06:13:39] 2024-05-19 13:13:23,212 | INFO     | ..............................
[2024-05-19 06:13:39] 2024-05-19 13:13:23,265 | INFO     | 
[2024-05-19 06:13:39] 2024-05-19 13:13:23,265 | INFO     | job summary report
[2024-05-19 06:13:39] 2024-05-19 13:13:23,265 | INFO     | --------------------------------------------------
[2024-05-19 06:13:39] 2024-05-19 13:13:23,265 | INFO     | PanDA job id: 6209206910
[2024-05-19 06:13:39] 2024-05-19 13:13:23,265 | INFO     | task id: 38776125
[2024-05-19 06:13:39] 2024-05-19 13:13:23,265 | INFO     | errors: (none)
[2024-05-19 06:13:39] 2024-05-19 13:13:23,265 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | pilot state: finished 
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | transexitcode: 0
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | exeerrorcode: 0
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | exeerrordiag: 
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | exitcode: 0
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | exitmsg: OK
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | cpuconsumptiontime: 32151 s
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | nevents: 400
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | neventsw: 0
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | pid: 131054
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | pgrp: 131054
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | corecount: 12
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | event service: False
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | sizes: {0: 2392024, 1: 2392223, 4: 2392429, 11: 2392457, 4628: 2418617, 4629: 2427571, 4630: 2427755, 4635: 2427925}
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | --------------------------------------------------
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | 
[2024-05-19 06:13:39] 2024-05-19 13:13:23,266 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,285 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,285 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,285 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,285 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 06:13:39] 2024-05-19 13:13:23,285 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,285 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 06:13:39] 2024-05-19 13:13:23,285 | INFO     | job 6209206910 has completed (purged errors)
[2024-05-19 06:13:39] 2024-05-19 13:13:23,285 | INFO     | overall cleanup function is called
[2024-05-19 06:13:39] 2024-05-19 13:13:24,292 | INFO     | --- collectZombieJob: --- 10, [131054]
[2024-05-19 06:13:39] 2024-05-19 13:13:24,292 | INFO     | zombie collector waiting for pid 131054
[2024-05-19 06:13:39] 2024-05-19 13:13:24,292 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 06:13:39] 2024-05-19 13:13:25,297 | INFO     | collected zombie processes
[2024-05-19 06:13:39] 2024-05-19 13:13:25,297 | INFO     | will now attempt to kill all subprocesses of pid=131054
[2024-05-19 06:13:39] 2024-05-19 13:13:25,406 | INFO     | process IDs to be killed: [131054] (in reverse order)
[2024-05-19 06:13:39] 2024-05-19 13:13:25,479 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 06:13:39] 2024-05-19 13:13:25,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 06:13:39] 2024-05-19 13:13:25,484 | INFO     | did not find any defunct processes belonging to 131054
[2024-05-19 06:13:39] 2024-05-19 13:13:25,489 | INFO     | did not find any defunct processes belonging to 131054
[2024-05-19 06:13:39] 2024-05-19 13:13:25,489 | INFO     | ready for new job
[2024-05-19 06:13:39] 2024-05-19 13:13:25,489 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 06:13:39] 2024-05-19 13:13:25,490 | INFO     | *************************************
[2024-05-19 06:13:39] 2024-05-19 13:13:25,490 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 06:13:39] 2024-05-19 13:13:25,490 | INFO     | *************************************
[2024-05-19 06:13:39] 2024-05-19 13:13:25,490 | INFO     | 
[2024-05-19 06:13:39] 2024-05-19 13:13:25,493 | INFO     | architecture information:
[2024-05-19 06:13:39] 2024-05-19 13:13:25,493 | INFO     | executing command: cat /etc/os-release
[2024-05-19 06:13:39] 2024-05-19 13:13:25,505 | INFO     | cat /etc/os-release:
[2024-05-19 06:13:39] NAME="CentOS Linux"
[2024-05-19 06:13:39] VERSION="7 (Core)"
[2024-05-19 06:13:39] ID="centos"
[2024-05-19 06:13:39] ID_LIKE="rhel fedora"
[2024-05-19 06:13:39] VERSION_ID="7"
[2024-05-19 06:13:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 06:13:39] ANSI_COLOR="0;31"
[2024-05-19 06:13:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 06:13:39] HOME_URL="https://www.centos.org/"
[2024-05-19 06:13:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 06:13:39] 
[2024-05-19 06:13:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 06:13:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 06:13:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 06:13:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 06:13:39] 
[2024-05-19 06:13:39] 2024-05-19 13:13:25,505 | INFO     | *************************************
[2024-05-19 06:13:39] 2024-05-19 13:13:26,009 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 06:13:39] 2024-05-19 13:13:26,025 | INFO     | sufficient remaining disk space (1992419180544 B)
[2024-05-19 06:13:39] 2024-05-19 13:13:26,026 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 06:13:39] 2024-05-19 13:13:26,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 06:13:39] 2024-05-19 13:13:26,026 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 06:13:39] 2024-05-19 13:13:26,027 | INFO     | aborting loop
[2024-05-19 06:13:39] 2024-05-19 13:13:26,464 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 06:13:39] 2024-05-19 13:13:26,465 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 06:13:39] 2024-05-19 13:13:26,465 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 06:13:39] 2024-05-19 13:13:26,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 06:13:39] 2024-05-19 13:13:26,966 | INFO     | all data control threads have been joined
[2024-05-19 06:13:39] 2024-05-19 13:13:27,031 | INFO     | [job] job monitor thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:27,032 | INFO     | [job] retrieve thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:27,034 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:27,132 | INFO     | all job control threads have been joined
[2024-05-19 06:13:39] 2024-05-19 13:13:27,399 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:27,457 | INFO     | all payload control threads have been joined
[2024-05-19 06:13:39] 2024-05-19 13:13:27,687 | INFO     | [job] validate thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:27,788 | INFO     | [payload] validate_post thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:27,837 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:27,838 | INFO     | [payload] failed_post thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:27,972 | INFO     | [data] control thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:28,008 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 06:13:39] 2024-05-19 13:13:28,135 | INFO     | [job] control thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:28,182 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:28,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 06:13:39] 2024-05-19 13:13:28,343 | INFO     | [data] copytool_in thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:28,462 | INFO     | [payload] control thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:28,833 | INFO     | [data] copytool_out thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:29,276 | INFO     | [job] queue monitor thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:32,011 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 06:13:39] 2024-05-19 13:13:33,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140196743898944)>', '<ExcThread(monitor, started 140196146292480)>']
[2024-05-19 06:13:39] 2024-05-19 13:13:33,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 06:13:39] 2024-05-19 13:13:33,496 | INFO     | [monitor] control thread has ended
[2024-05-19 06:13:39] 2024-05-19 13:13:38,365 | INFO     | all workflow threads have been joined
[2024-05-19 06:13:39] 2024-05-19 13:13:38,365 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 06:13:39] 2024-05-19 13:13:38,366 | INFO     | traces error code: 0
[2024-05-19 06:13:39] 2024-05-19 13:13:38,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 06:13:39] 2024-05-19 13:13:38,439 [wrapper] ==== pilot stdout END ====
[2024-05-19 06:13:39] 2024-05-19 13:13:38,441 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 06:13:39] 2024-05-19 13:13:38,443 [wrapper] pilotpid: 114131
[2024-05-19 06:13:39] 2024-05-19 13:13:38,445 [wrapper] Pilot exit status: 0
[2024-05-19 06:13:39] 2024-05-19 13:13:38,453 [wrapper] pandaids: 6209206910
[2024-05-19 06:13:39] 2024-05-19 13:13:38,501 [wrapper] cleanup: SIGTERM to supervisor_pilot    486 114132
[2024-05-19 06:13:39] 2024-05-19 13:13:38,503 [wrapper] Test setup, not cleaning
[2024-05-19 06:13:39] 2024-05-19 13:13:38,504 [wrapper] ==== wrapper stdout END ====
[2024-05-19 06:13:39] 2024-05-19 13:13:38,506 [wrapper] ==== wrapper stderr END ====
[2024-05-19 06:13:39] 2024-05-19 13:13:38,510 [wrapper] apfmon messages muted
[2024-05-19 06:13:39]  *** Error codes and diagnostics ***
[2024-05-19 06:13:39]     "exeErrorCode": 0,
[2024-05-19 06:13:39]     "exeErrorDiag": "",
[2024-05-19 06:13:39]     "pilotErrorCode": 0,
[2024-05-19 06:13:39]     "pilotErrorDiag": "",
[2024-05-19 06:13:39]  *** Listing of results directory ***
[2024-05-19 06:13:39] total 832676
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc    467845 May 18 14:00 pilot3.tar.gz
[2024-05-19 06:13:39] -rwx------ 1 boinc boinc     32251 May 18 14:04 runpilot2-wrapper.sh
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc      5633 May 18 14:04 queuedata.json
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc       100 May 19 04:55 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 06:13:39] -rwxr-xr-x 1 boinc boinc      7986 May 19 04:55 run_atlas
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc       105 May 19 04:55 job.xml
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc      6627 May 19 04:55 init_data.xml
[2024-05-19 06:13:39] -rw-r--r-- 2 boinc boinc 601228092 May 19 04:55 EVNT.38776119._000547.pool.root.1
[2024-05-19 06:13:39] -rw-r--r-- 2 boinc boinc     17537 May 19 04:55 start_atlas.sh
[2024-05-19 06:13:39] drwxrwx--x 2 boinc boinc      4096 May 19 04:55 shared
[2024-05-19 06:13:39] -rw-r--r-- 2 boinc boinc    480006 May 19 04:55 input.tar.gz
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc         0 May 19 04:55 boinc_lockfile
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc      2635 May 19 04:55 pandaJob.out
[2024-05-19 06:13:39] -rw------- 1 boinc boinc       424 May 19 04:55 setup.sh.local
[2024-05-19 06:13:39] -rw------- 1 boinc boinc   1014061 May 19 04:55 agis_schedconf.cvmfs.json
[2024-05-19 06:13:39] -rw------- 1 boinc boinc         0 May 19 04:55 agis_ddmendpoints.agis.ALL.json
[2024-05-19 06:13:39] -rw------- 1 boinc boinc   1324701 May 19 04:55 cric_ddmendpoints.json
[2024-05-19 06:13:39] drwx------ 4 boinc boinc      4096 May 19 04:55 pilot3
[2024-05-19 06:13:39] -rw------- 1 boinc boinc 246299556 May 19 06:12 HITS.38776125._019168.pool.root.1
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc       530 May 19 06:12 boinc_task_state.xml
[2024-05-19 06:13:39] -rw------- 1 boinc boinc      1062 May 19 06:13 memory_monitor_summary.json
[2024-05-19 06:13:39] -rw------- 1 boinc boinc    364188 May 19 06:13 log.38776125._019168.job.log.tgz.1
[2024-05-19 06:13:39] -rw------- 1 boinc boinc        95 May 19 06:13 pilot_heartbeat.json
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc      8192 May 19 06:13 boinc_mmap_file
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc        27 May 19 06:13 wrapper_checkpoint.txt
[2024-05-19 06:13:39] -rw------- 1 boinc boinc      7782 May 19 06:13 heartbeat.json
[2024-05-19 06:13:39] -rw------- 1 boinc boinc      4210 May 19 06:13 pilotlog.txt
[2024-05-19 06:13:39] -rw------- 1 boinc boinc    440192 May 19 06:13 log.38776125._019168.job.log.1
[2024-05-19 06:13:39] -rw------- 1 boinc boinc       357 May 19 06:13 output.list
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc       620 May 19 06:13 runtime_log
[2024-05-19 06:13:39] -rw------- 1 boinc boinc    819200 May 19 06:13 result.tar.gz
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc     11286 May 19 06:13 runtime_log.err
[2024-05-19 06:13:39] -rw------- 1 boinc boinc       653 May 19 06:13 cwMMDmiPgS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmmIMKDm5vPBvn.diag
[2024-05-19 06:13:39] -rw-r--r-- 1 boinc boinc     21581 May 19 06:13 stderr.txt
[2024-05-19 06:13:39] HITS file was successfully produced:
[2024-05-19 06:13:39] -rw------- 1 boinc boinc 246299556 May 19 06:12 shared/HITS.pool.root.1
[2024-05-19 06:13:39]  *** Contents of shared directory: ***
[2024-05-19 06:13:39] total 828968
[2024-05-19 06:13:39] -rw-r--r-- 2 boinc boinc 601228092 May 19 04:55 ATLAS.root_0
[2024-05-19 06:13:39] -rw-r--r-- 2 boinc boinc     17537 May 19 04:55 start_atlas.sh
[2024-05-19 06:13:39] -rw-r--r-- 2 boinc boinc    480006 May 19 04:55 input.tar.gz
[2024-05-19 06:13:39] -rw------- 1 boinc boinc 246299556 May 19 06:12 HITS.pool.root.1
[2024-05-19 06:13:39] -rw------- 1 boinc boinc    819200 May 19 06:13 result.tar.gz
06:13:41 (106213): run_atlas exited; CPU time 31983.583036
06:13:41 (106213): called boinc_finish(0)

</stderr_txt>
]]>

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