Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
23:21:44 (179607): wrapper (7.7.26015): starting
23:21:44 (179607): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 23:21:44] Arguments: --nthreads 12
[2024-05-18 23:21:44] Threads: 12
[2024-05-18 23:21:44] Checking for CVMFS
[2024-05-18 23:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 23:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 23:21:44] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 23:21:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 23:21:44] 2.10.1.0 45700 185988 127488 132904 3 85 27055525 45568001 17188 130560 0 1230068388 99.764 753428098 18080 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 23:21:44] CVMFS is ok
[2024-05-18 23:21:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 23:21:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 23:21:44] Further information can be found at the LHC@home message board.
[2024-05-18 23:21:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 23:21:44] Checking for apptainer binary...
[2024-05-18 23:21:44] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 23:21:44] Running /usr/bin/apptainer --version
[2024-05-18 23:21:44] apptainer version 1.1.8-1.el7
[2024-05-18 23:21:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 23:21:46] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0033.triumf.lcg
[2024-05-18 23:21:46] apptainer works
[2024-05-18 23:21:46] Set ATHENA_PROC_NUMBER=12
[2024-05-18 23:21:46] Set ATHENA_CORE_NUMBER=12
[2024-05-18 23:21:46] Starting ATLAS job with PandaID=6209206812
[2024-05-18 23:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 00:24:33]  *** The last 200 lines of the pilot log: ***
[2024-05-19 00:24:33]  direct_access_lan=False
[2024-05-19 00:24:33]  direct_access_wan=False
[2024-05-19 00:24:33]  domain=
[2024-05-19 00:24:33]  filesize=358961
[2024-05-19 00:24:33]  filetype=log
[2024-05-19 00:24:33]  guid=ff768a24-b577-4095-b1a7-3656a6867a3b
[2024-05-19 00:24:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-19 00:24:33]  is_tar=False
[2024-05-19 00:24:33]  lfn=log.38776125._019071.job.log.tgz.1
[2024-05-19 00:24:33]  mtime=0
[2024-05-19 00:24:33]  protocol_id=None
[2024-05-19 00:24:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 00:24:33]  replicas=None
[2024-05-19 00:24:33]  scope=mc23_13p6TeV
[2024-05-19 00:24:33]  status=None
[2024-05-19 00:24:33]  status_code=0
[2024-05-19 00:24:33]  storage_token=
[2024-05-19 00:24:33]  surl=/home/boinc/slots/0/PanDA_Pilot-6209206812/log.38776125._019071.job.log.tgz.1
[2024-05-19 00:24:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/17/log.38776125._019071.job.log.tgz.1
[2024-05-19 00:24:33]  workdir=None
[2024-05-19 00:24:33] ]
[2024-05-19 00:24:33] 2024-05-19 07:24:15,671 | INFO     | transferring file log.38776125._019071.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209206812/log.38776125._019071.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-19 00:24:33] 2024-05-19 07:24:15,672 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209206812/log.38776125._019071.job.log.tgz.1 /home/boinc/slots/0/log.38776125._019071.job.log.t
[2024-05-19 00:24:33] 2024-05-19 07:24:15,698 | INFO     | adding to output.list: log.38776125._019071.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/58/17/log.38776125._019071.job.log.tg
[2024-05-19 00:24:33] 2024-05-19 07:24:15,699 | INFO     | summary of transferred files:
[2024-05-19 00:24:33] 2024-05-19 07:24:15,699 | INFO     |  -- lfn=log.38776125._019071.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 00:24:33] 2024-05-19 07:24:15,699 | INFO     | stage-out finished correctly
[2024-05-19 00:24:33] 2024-05-19 07:24:15,840 | INFO     | monitor loop #288: job 0:6209206812 is in state 'finished'
[2024-05-19 00:24:33] 2024-05-19 07:24:15,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 00:24:33] 2024-05-19 07:24:16,086 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 00:24:33] 2024-05-19 07:24:16,165 | INFO     | job 6209206812 has state=finished
[2024-05-19 00:24:33] 2024-05-19 07:24:16,165 | INFO     | preparing for final server update for job 6209206812 in state='finished'
[2024-05-19 00:24:33] 2024-05-19 07:24:16,166 | INFO     | this job has now completed (state=finished)
[2024-05-19 00:24:33] 2024-05-19 07:24:16,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 00:24:33] 2024-05-19 07:24:16,166 | INFO     | job 6209206812 has finished - writing final server update
[2024-05-19 00:24:33] 2024-05-19 07:24:16,166 | INFO     | total number of processed events: 400 (read)
[2024-05-19 00:24:33] 2024-05-19 07:24:16,169 | INFO     | executing command: lscpu
[2024-05-19 00:24:33] 2024-05-19 07:24:16,239 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-19 00:24:33] 2024-05-19 07:24:16,239 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 00:24:33] 2024-05-19 07:24:16,274 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 00:24:33] 2024-05-19 07:24:18,344 | INFO     | monitor loop #289: job 0:6209206812 is in state 'finished'
[2024-05-19 00:24:33] 2024-05-19 07:24:18,344 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 00:24:33] 2024-05-19 07:24:19,677 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 00:24:33] 2024-05-19 07:24:19,678 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209206812/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 00:24:33] 2024-05-19 07:24:19,678 | INFO     | extracted standard info from prmon json
[2024-05-19 00:24:33] 2024-05-19 07:24:19,679 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 00:24:33] 2024-05-19 07:24:19,679 | WARNING  | GPU info not found in prmon json
[2024-05-19 00:24:33] 2024-05-19 07:24:19,679 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 00:24:33] 2024-05-19 07:24:19,679 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 00:24:33] 2024-05-19 07:24:19,680 | INFO     | fitting pss+swap vs Time
[2024-05-19 00:24:33] 2024-05-19 07:24:19,680 | INFO     | model: linear, x: [1716100044.0, 1716100105.0, 1716100166.0, 1716100227.0, 1716100288.0, 1716100349.0, 1716100410.0, 1716100471.0, 1716100532.0, 1716100593.0, 1716
[2024-05-19 00:24:33] 2024-05-19 07:24:19,680 | INFO     | sum of square deviations: 48810217.5
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | sum of deviations: 17472626957.5
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | mean x: 1716101660.5
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | mean y: 2698125.611111111
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | -- intersect: -614311387548.4143
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | intersect: -614311387548.4143
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | chi2: 2.1281388227263367
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | -- intersect: -614311387548.4143
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | current memory leak: 357.97 B/s (using 54 data points, chi2=2.13)
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | ..............................
[2024-05-19 00:24:33] 2024-05-19 07:24:19,681 | INFO     | . Timing measurements:
[2024-05-19 00:24:33] 2024-05-19 07:24:19,682 | INFO     | . get job = 0 s
[2024-05-19 00:24:33] 2024-05-19 07:24:19,682 | INFO     | . initial setup = 1 s
[2024-05-19 00:24:33] 2024-05-19 07:24:19,682 | INFO     | . payload setup = 4 s
[2024-05-19 00:24:33] 2024-05-19 07:24:19,682 | INFO     | . stage-in = 0 s
[2024-05-19 00:24:33] 2024-05-19 07:24:19,682 | INFO     | . payload execution = 3715 s
[2024-05-19 00:24:33] 2024-05-19 07:24:19,682 | INFO     | . stage-out = 0 s
[2024-05-19 00:24:33] 2024-05-19 07:24:19,682 | INFO     | . log creation = 0 s
[2024-05-19 00:24:33] 2024-05-19 07:24:19,682 | INFO     | ..............................
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | 
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | job summary report
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | --------------------------------------------------
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | PanDA job id: 6209206812
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | task id: 38776125
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | errors: (none)
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | pilot state: finished 
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | transexitcode: 0
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | exeerrorcode: 0
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | exeerrordiag: 
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | exitcode: 0
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | exitmsg: OK
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | cpuconsumptiontime: 31520 s
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | nevents: 400
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | neventsw: 0
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | pid: 198840
[2024-05-19 00:24:33] 2024-05-19 07:24:19,737 | INFO     | pgrp: 198840
[2024-05-19 00:24:33] 2024-05-19 07:24:19,738 | INFO     | corecount: 12
[2024-05-19 00:24:33] 2024-05-19 07:24:19,738 | INFO     | event service: False
[2024-05-19 00:24:33] 2024-05-19 07:24:19,738 | INFO     | sizes: {0: 2392145, 1: 2392145, 4: 2392379, 11: 2392407, 3723: 2418159, 3725: 2427113, 3726: 2427297, 3729: 2427467}
[2024-05-19 00:24:33] 2024-05-19 07:24:19,738 | INFO     | --------------------------------------------------
[2024-05-19 00:24:33] 2024-05-19 07:24:19,738 | INFO     | 
[2024-05-19 00:24:33] 2024-05-19 07:24:19,738 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,761 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 00:24:33] 2024-05-19 07:24:19,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,761 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 00:24:33] 2024-05-19 07:24:19,761 | INFO     | job 6209206812 has completed (purged errors)
[2024-05-19 00:24:33] 2024-05-19 07:24:19,761 | INFO     | overall cleanup function is called
[2024-05-19 00:24:33] 2024-05-19 07:24:20,764 | INFO     | --- collectZombieJob: --- 10, [198840]
[2024-05-19 00:24:33] 2024-05-19 07:24:20,764 | INFO     | zombie collector waiting for pid 198840
[2024-05-19 00:24:33] 2024-05-19 07:24:20,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 00:24:33] 2024-05-19 07:24:21,769 | INFO     | collected zombie processes
[2024-05-19 00:24:33] 2024-05-19 07:24:21,769 | INFO     | will now attempt to kill all subprocesses of pid=198840
[2024-05-19 00:24:33] 2024-05-19 07:24:21,962 | INFO     | process IDs to be killed: [198840] (in reverse order)
[2024-05-19 00:24:33] 2024-05-19 07:24:22,070 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 00:24:33] 2024-05-19 07:24:22,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 00:24:33] 2024-05-19 07:24:22,077 | INFO     | did not find any defunct processes belonging to 198840
[2024-05-19 00:24:33] 2024-05-19 07:24:22,084 | INFO     | did not find any defunct processes belonging to 198840
[2024-05-19 00:24:33] 2024-05-19 07:24:22,084 | INFO     | ready for new job
[2024-05-19 00:24:33] 2024-05-19 07:24:22,084 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 00:24:33] 2024-05-19 07:24:22,085 | INFO     | *************************************
[2024-05-19 00:24:33] 2024-05-19 07:24:22,085 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 00:24:33] 2024-05-19 07:24:22,086 | INFO     | *************************************
[2024-05-19 00:24:33] 2024-05-19 07:24:22,086 | INFO     | 
[2024-05-19 00:24:33] 2024-05-19 07:24:22,088 | INFO     | architecture information:
[2024-05-19 00:24:33] 2024-05-19 07:24:22,088 | INFO     | executing command: cat /etc/os-release
[2024-05-19 00:24:33] 2024-05-19 07:24:22,103 | INFO     | cat /etc/os-release:
[2024-05-19 00:24:33] NAME="CentOS Linux"
[2024-05-19 00:24:33] VERSION="7 (Core)"
[2024-05-19 00:24:33] ID="centos"
[2024-05-19 00:24:33] ID_LIKE="rhel fedora"
[2024-05-19 00:24:33] VERSION_ID="7"
[2024-05-19 00:24:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 00:24:33] ANSI_COLOR="0;31"
[2024-05-19 00:24:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 00:24:33] HOME_URL="https://www.centos.org/"
[2024-05-19 00:24:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 00:24:33] 
[2024-05-19 00:24:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 00:24:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 00:24:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 00:24:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 00:24:33] 
[2024-05-19 00:24:33] 2024-05-19 07:24:22,103 | INFO     | *************************************
[2024-05-19 00:24:33] 2024-05-19 07:24:22,606 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 00:24:33] 2024-05-19 07:24:22,626 | INFO     | sufficient remaining disk space (1279780716544 B)
[2024-05-19 00:24:33] 2024-05-19 07:24:22,627 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 00:24:33] 2024-05-19 07:24:22,627 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 00:24:33] 2024-05-19 07:24:22,627 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 00:24:33] 2024-05-19 07:24:22,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 00:24:33] 2024-05-19 07:24:22,628 | INFO     | aborting loop
[2024-05-19 00:24:33] 2024-05-19 07:24:22,808 | INFO     | all data control threads have been joined
[2024-05-19 00:24:33] 2024-05-19 07:24:23,187 | INFO     | all payload control threads have been joined
[2024-05-19 00:24:33] 2024-05-19 07:24:23,209 | INFO     | all job control threads have been joined
[2024-05-19 00:24:33] 2024-05-19 07:24:23,269 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 00:24:33] 2024-05-19 07:24:23,269 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 00:24:33] 2024-05-19 07:24:23,269 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 00:24:33] 2024-05-19 07:24:23,632 | INFO     | [job] retrieve thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:23,633 | INFO     | [job] job monitor thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:23,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 00:24:33] 2024-05-19 07:24:23,810 | INFO     | [data] control thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:24,097 | INFO     | [job] validate thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:24,177 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:24,192 | INFO     | [payload] control thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:24,214 | INFO     | [job] control thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:24,232 | INFO     | [payload] validate_post thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:24,282 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:24,748 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 00:24:33] 2024-05-19 07:24:24,787 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:25,057 | INFO     | [payload] failed_post thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:25,095 | INFO     | [data] copytool_in thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:25,097 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:25,751 | INFO     | [job] queue monitor thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:25,765 | INFO     | [data] copytool_out thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:26,634 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 00:24:33] 2024-05-19 07:24:27,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065784076096)>', '<ExcThread(monitor, started 140065367901952)>']
[2024-05-19 00:24:33] 2024-05-19 07:24:28,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 00:24:33] 2024-05-19 07:24:28,290 | INFO     | [monitor] control thread has ended
[2024-05-19 00:24:33] 2024-05-19 07:24:32,940 | INFO     | all workflow threads have been joined
[2024-05-19 00:24:33] 2024-05-19 07:24:32,941 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 00:24:33] 2024-05-19 07:24:32,941 | INFO     | traces error code: 0
[2024-05-19 00:24:33] 2024-05-19 07:24:32,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 00:24:33] 2024-05-19 07:24:33,083 [wrapper] ==== pilot stdout END ====
[2024-05-19 00:24:33] 2024-05-19 07:24:33,086 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 00:24:33] 2024-05-19 07:24:33,089 [wrapper] pilotpid: 187749
[2024-05-19 00:24:33] 2024-05-19 07:24:33,093 [wrapper] Pilot exit status: 0
[2024-05-19 00:24:33] 2024-05-19 07:24:33,103 [wrapper] pandaids: 6209206812
[2024-05-19 00:24:33] 2024-05-19 07:24:33,201 [wrapper] cleanup: SIGTERM to supervisor_pilot 111980 187750
[2024-05-19 00:24:33] 2024-05-19 07:24:33,203 [wrapper] Test setup, not cleaning
[2024-05-19 00:24:33] 2024-05-19 07:24:33,205 [wrapper] ==== wrapper stdout END ====
[2024-05-19 00:24:33] 2024-05-19 07:24:33,207 [wrapper] ==== wrapper stderr END ====
[2024-05-19 00:24:33] 2024-05-19 07:24:33,211 [wrapper] apfmon messages muted
[2024-05-19 00:24:33]  *** Error codes and diagnostics ***
[2024-05-19 00:24:33]     "exeErrorCode": 0,
[2024-05-19 00:24:33]     "exeErrorDiag": "",
[2024-05-19 00:24:33]     "pilotErrorCode": 0,
[2024-05-19 00:24:33]     "pilotErrorDiag": "",
[2024-05-19 00:24:33]  *** Listing of results directory ***
[2024-05-19 00:24:34] total 827276
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc    467845 May 18 13:34 pilot3.tar.gz
[2024-05-19 00:24:34] -rwx------ 1 boinc boinc     32251 May 18 13:52 runpilot2-wrapper.sh
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc      5633 May 18 13:52 queuedata.json
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc       100 May 18 23:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 00:24:34] -rwxr-xr-x 1 boinc boinc      7986 May 18 23:21 run_atlas
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc       105 May 18 23:21 job.xml
[2024-05-19 00:24:34] -rw-r--r-- 2 boinc boinc 598416873 May 18 23:21 EVNT.38776119._000542.pool.root.1
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc      6626 May 18 23:21 init_data.xml
[2024-05-19 00:24:34] drwxrwx--x 2 boinc boinc      4096 May 18 23:21 shared
[2024-05-19 00:24:34] -rw-r--r-- 2 boinc boinc    480008 May 18 23:21 input.tar.gz
[2024-05-19 00:24:34] -rw-r--r-- 2 boinc boinc     17537 May 18 23:21 start_atlas.sh
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc         0 May 18 23:21 boinc_lockfile
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc      2635 May 18 23:21 pandaJob.out
[2024-05-19 00:24:34] -rw------- 1 boinc boinc       424 May 18 23:21 setup.sh.local
[2024-05-19 00:24:34] -rw------- 1 boinc boinc   1013987 May 18 23:21 agis_schedconf.cvmfs.json
[2024-05-19 00:24:34] -rw------- 1 boinc boinc         0 May 18 23:21 agis_ddmendpoints.agis.ALL.json
[2024-05-19 00:24:34] -rw------- 1 boinc boinc   1324701 May 18 23:21 cric_ddmendpoints.json
[2024-05-19 00:24:34] drwx------ 4 boinc boinc      4096 May 18 23:21 pilot3
[2024-05-19 00:24:34] -rw------- 1 boinc boinc 243714109 May 19 00:23 HITS.38776125._019071.pool.root.1
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc       530 May 19 00:23 boinc_task_state.xml
[2024-05-19 00:24:34] -rw------- 1 boinc boinc        95 May 19 00:24 pilot_heartbeat.json
[2024-05-19 00:24:34] -rw------- 1 boinc boinc      1061 May 19 00:24 memory_monitor_summary.json
[2024-05-19 00:24:34] -rw------- 1 boinc boinc    358961 May 19 00:24 log.38776125._019071.job.log.tgz.1
[2024-05-19 00:24:34] -rw------- 1 boinc boinc      7783 May 19 00:24 heartbeat.json
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc        27 May 19 00:24 wrapper_checkpoint.txt
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc      8192 May 19 00:24 boinc_mmap_file
[2024-05-19 00:24:34] -rw------- 1 boinc boinc      4210 May 19 00:24 pilotlog.txt
[2024-05-19 00:24:34] -rw------- 1 boinc boinc    376712 May 19 00:24 log.38776125._019071.job.log.1
[2024-05-19 00:24:34] -rw------- 1 boinc boinc       357 May 19 00:24 output.list
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc       620 May 19 00:24 runtime_log
[2024-05-19 00:24:34] -rw------- 1 boinc boinc    757760 May 19 00:24 result.tar.gz
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc     11286 May 19 00:24 runtime_log.err
[2024-05-19 00:24:34] -rw------- 1 boinc boinc       654 May 19 00:24 QtfKDmVDgS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmrATKDmo3zAPm.diag
[2024-05-19 00:24:34] -rw-r--r-- 1 boinc boinc     21393 May 19 00:24 stderr.txt
[2024-05-19 00:24:34] HITS file was successfully produced:
[2024-05-19 00:24:34] -rw------- 1 boinc boinc 243714109 May 19 00:23 shared/HITS.pool.root.1
[2024-05-19 00:24:34]  *** Contents of shared directory: ***
[2024-05-19 00:24:34] total 823636
[2024-05-19 00:24:34] -rw-r--r-- 2 boinc boinc 598416873 May 18 23:21 ATLAS.root_0
[2024-05-19 00:24:34] -rw-r--r-- 2 boinc boinc    480008 May 18 23:21 input.tar.gz
[2024-05-19 00:24:34] -rw-r--r-- 2 boinc boinc     17537 May 18 23:21 start_atlas.sh
[2024-05-19 00:24:34] -rw------- 1 boinc boinc 243714109 May 19 00:23 HITS.pool.root.1
[2024-05-19 00:24:34] -rw------- 1 boinc boinc    757760 May 19 00:24 result.tar.gz
00:24:35 (179607): run_atlas exited; CPU time 31370.637234
00:24:35 (179607): called boinc_finish(0)

</stderr_txt>
]]>

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