Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
19:33:39 (166602): wrapper (7.7.26015): starting
19:33:39 (166602): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 19:33:39] Arguments: --nthreads 12
[2024-05-18 19:33:39] Threads: 12
[2024-05-18 19:33:39] Checking for CVMFS
[2024-05-18 19:33:39] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 19:33:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 19:33:39] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 19:33:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 19:33:39] 2.10.1.0 2812 174506 155060 132898 3 149 34801233 45568001 12745 130560 0 1095422878 99.752 691487398 18260 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 19:33:39] CVMFS is ok
[2024-05-18 19:33:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 19:33:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 19:33:39] Further information can be found at the LHC@home message board.
[2024-05-18 19:33:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 19:33:39] Checking for apptainer binary...
[2024-05-18 19:33:39] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 19:33:39] Running /usr/bin/apptainer --version
[2024-05-18 19:33:39] apptainer version 1.1.8-1.el7
[2024-05-18 19:33:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 19:33:40] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0073.triumf.lcg
[2024-05-18 19:33:40] apptainer works
[2024-05-18 19:33:40] Set ATHENA_PROC_NUMBER=12
[2024-05-18 19:33:40] Set ATHENA_CORE_NUMBER=12
[2024-05-18 19:33:40] Starting ATLAS job with PandaID=6209183481
[2024-05-18 19:33:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 21:02:54]  *** The last 200 lines of the pilot log: ***
[2024-05-18 21:02:54]  direct_access_lan=False
[2024-05-18 21:02:54]  direct_access_wan=False
[2024-05-18 21:02:54]  domain=
[2024-05-18 21:02:54]  filesize=375876
[2024-05-18 21:02:54]  filetype=log
[2024-05-18 21:02:54]  guid=21d6a8e3-ad5f-4648-a929-395f48a9646d
[2024-05-18 21:02:54]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 21:02:54]  is_tar=False
[2024-05-18 21:02:54]  lfn=log.38776125._018635.job.log.tgz.1
[2024-05-18 21:02:54]  mtime=0
[2024-05-18 21:02:54]  protocol_id=None
[2024-05-18 21:02:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 21:02:54]  replicas=None
[2024-05-18 21:02:54]  scope=mc23_13p6TeV
[2024-05-18 21:02:54]  status=None
[2024-05-18 21:02:54]  status_code=0
[2024-05-18 21:02:54]  storage_token=
[2024-05-18 21:02:54]  surl=/home/boinc/slots/0/PanDA_Pilot-6209183481/log.38776125._018635.job.log.tgz.1
[2024-05-18 21:02:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/4a/log.38776125._018635.job.log.tgz.1
[2024-05-18 21:02:54]  workdir=None
[2024-05-18 21:02:54] ]
[2024-05-18 21:02:54] 2024-05-19 04:02:27,032 | INFO     | transferring file log.38776125._018635.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209183481/log.38776125._018635.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 21:02:54] 2024-05-19 04:02:27,032 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209183481/log.38776125._018635.job.log.tgz.1 /home/boinc/slots/0/log.38776125._018635.job.log.t
[2024-05-18 21:02:54] 2024-05-19 04:02:27,049 | INFO     | adding to output.list: log.38776125._018635.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/92/4a/log.38776125._018635.job.log.tg
[2024-05-18 21:02:54] 2024-05-19 04:02:27,050 | INFO     | summary of transferred files:
[2024-05-18 21:02:54] 2024-05-19 04:02:27,050 | INFO     |  -- lfn=log.38776125._018635.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 21:02:54] 2024-05-19 04:02:27,050 | INFO     | stage-out finished correctly
[2024-05-18 21:02:54] 2024-05-19 04:02:27,103 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 21:02:54] 2024-05-19 04:02:27,548 | INFO     | job 6209183481 has state=finished
[2024-05-18 21:02:54] 2024-05-19 04:02:27,548 | INFO     | preparing for final server update for job 6209183481 in state='finished'
[2024-05-18 21:02:54] 2024-05-19 04:02:27,549 | INFO     | this job has now completed (state=finished)
[2024-05-18 21:02:54] 2024-05-19 04:02:27,549 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 21:02:54] 2024-05-19 04:02:27,549 | INFO     | job 6209183481 has finished - writing final server update
[2024-05-18 21:02:54] 2024-05-19 04:02:27,549 | INFO     | total number of processed events: 400 (read)
[2024-05-18 21:02:54] 2024-05-19 04:02:27,554 | INFO     | executing command: lscpu
[2024-05-18 21:02:54] 2024-05-19 04:02:27,601 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 21:02:54] 2024-05-19 04:02:27,601 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 21:02:54] 2024-05-19 04:02:27,641 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 21:02:54] 2024-05-19 04:02:31,940 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 21:02:54] 2024-05-19 04:02:31,940 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209183481/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 21:02:54] 2024-05-19 04:02:31,944 | INFO     | extracted standard info from prmon json
[2024-05-18 21:02:54] 2024-05-19 04:02:31,945 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 21:02:54] 2024-05-19 04:02:31,945 | WARNING  | GPU info not found in prmon json
[2024-05-18 21:02:54] 2024-05-19 04:02:31,945 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 21:02:54] 2024-05-19 04:02:31,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 21:02:54] 2024-05-19 04:02:31,947 | INFO     | fitting pss+swap vs Time
[2024-05-18 21:02:54] 2024-05-19 04:02:31,947 | INFO     | model: linear, x: [1716086360.0, 1716086421.0, 1716086482.0, 1716086543.0, 1716086604.0, 1716086665.0, 1716086726.0, 1716086787.0, 1716086848.0, 1716086909.0, 1716
[2024-05-18 21:02:54] 2024-05-19 04:02:31,948 | INFO     | sum of square deviations: 158736119.48750016
[2024-05-18 21:02:54] 2024-05-19 04:02:31,948 | INFO     | sum of deviations: 19871472224.262497
[2024-05-18 21:02:54] 2024-05-19 04:02:31,948 | INFO     | mean x: 1716088769.7375
[2024-05-18 21:02:54] 2024-05-19 04:02:31,948 | INFO     | mean y: 2683307.0125
[2024-05-18 21:02:54] 2024-05-19 04:02:31,948 | INFO     | -- intersect: -214826874277.661
[2024-05-18 21:02:54] 2024-05-19 04:02:31,948 | INFO     | intersect: -214826874277.661
[2024-05-18 21:02:54] 2024-05-19 04:02:31,948 | INFO     | chi2: 2.5362481655075646
[2024-05-18 21:02:54] 2024-05-19 04:02:31,948 | INFO     | -- intersect: -214826874277.661
[2024-05-18 21:02:54] 2024-05-19 04:02:31,948 | INFO     | current memory leak: 125.19 B/s (using 80 data points, chi2=2.54)
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | ..............................
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | . Timing measurements:
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | . get job = 0 s
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | . initial setup = 1 s
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | . payload setup = 4 s
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | . stage-in = 0 s
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | . payload execution = 5291 s
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | . stage-out = 1 s
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | . log creation = 0 s
[2024-05-18 21:02:54] 2024-05-19 04:02:31,949 | INFO     | ..............................
[2024-05-18 21:02:54] 2024-05-19 04:02:32,001 | INFO     | 
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | job summary report
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | --------------------------------------------------
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | PanDA job id: 6209183481
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | task id: 38776125
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | errors: (none)
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | pilot state: finished 
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | transexitcode: 0
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | exeerrorcode: 0
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | exeerrordiag: 
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | exitcode: 0
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | exitmsg: OK
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | cpuconsumptiontime: 33063 s
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | nevents: 400
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | neventsw: 0
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | pid: 177216
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | pgrp: 177216
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | corecount: 12
[2024-05-18 21:02:54] 2024-05-19 04:02:32,002 | INFO     | event service: False
[2024-05-18 21:02:54] 2024-05-19 04:02:32,003 | INFO     | sizes: {0: 2392195, 4: 2392401, 11: 2392429, 5299: 2418881, 5301: 2427891, 5306: 2428005}
[2024-05-18 21:02:54] 2024-05-19 04:02:32,003 | INFO     | --------------------------------------------------
[2024-05-18 21:02:54] 2024-05-19 04:02:32,003 | INFO     | 
[2024-05-18 21:02:54] 2024-05-19 04:02:32,003 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 21:02:54] 2024-05-19 04:02:32,051 | WARNING  | process 177216 is no longer using CPU - aborting
[2024-05-18 21:02:54] 2024-05-19 04:02:32,051 | INFO     | aborting job monitoring since job object (job id=6209183481) has expired
[2024-05-18 21:02:54] 2024-05-19 04:02:32,070 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,070 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,070 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,071 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,072 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,072 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,072 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 21:02:54] 2024-05-19 04:02:32,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,073 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 21:02:54] 2024-05-19 04:02:32,073 | INFO     | job 6209183481 has completed (purged errors)
[2024-05-18 21:02:54] 2024-05-19 04:02:32,073 | INFO     | overall cleanup function is called
[2024-05-18 21:02:54] 2024-05-19 04:02:33,082 | INFO     | --- collectZombieJob: --- 10, [177216]
[2024-05-18 21:02:54] 2024-05-19 04:02:33,082 | INFO     | zombie collector waiting for pid 177216
[2024-05-18 21:02:54] 2024-05-19 04:02:33,082 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 21:02:54] 2024-05-19 04:02:34,087 | INFO     | collected zombie processes
[2024-05-18 21:02:54] 2024-05-19 04:02:34,088 | INFO     | will now attempt to kill all subprocesses of pid=177216
[2024-05-18 21:02:54] 2024-05-19 04:02:34,250 | INFO     | process IDs to be killed: [177216] (in reverse order)
[2024-05-18 21:02:54] 2024-05-19 04:02:34,679 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 21:02:54] 2024-05-19 04:02:34,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 21:02:54] 2024-05-19 04:02:34,689 | INFO     | did not find any defunct processes belonging to 177216
[2024-05-18 21:02:54] 2024-05-19 04:02:34,697 | INFO     | did not find any defunct processes belonging to 177216
[2024-05-18 21:02:54] 2024-05-19 04:02:34,697 | INFO     | ready for new job
[2024-05-18 21:02:54] 2024-05-19 04:02:34,697 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 21:02:54] 2024-05-19 04:02:34,699 | INFO     | *************************************
[2024-05-18 21:02:54] 2024-05-19 04:02:34,699 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 21:02:54] 2024-05-19 04:02:34,700 | INFO     | *************************************
[2024-05-18 21:02:54] 2024-05-19 04:02:34,700 | INFO     | 
[2024-05-18 21:02:54] 2024-05-19 04:02:34,703 | INFO     | architecture information:
[2024-05-18 21:02:54] 2024-05-19 04:02:34,704 | INFO     | executing command: cat /etc/os-release
[2024-05-18 21:02:54] 2024-05-19 04:02:34,718 | INFO     | cat /etc/os-release:
[2024-05-18 21:02:54] NAME="CentOS Linux"
[2024-05-18 21:02:54] VERSION="7 (Core)"
[2024-05-18 21:02:54] ID="centos"
[2024-05-18 21:02:54] ID_LIKE="rhel fedora"
[2024-05-18 21:02:54] VERSION_ID="7"
[2024-05-18 21:02:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 21:02:54] ANSI_COLOR="0;31"
[2024-05-18 21:02:54] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 21:02:54] HOME_URL="https://www.centos.org/"
[2024-05-18 21:02:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 21:02:54] 
[2024-05-18 21:02:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 21:02:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 21:02:54] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 21:02:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 21:02:54] 
[2024-05-18 21:02:54] 2024-05-19 04:02:34,718 | INFO     | *************************************
[2024-05-18 21:02:54] 2024-05-19 04:02:35,221 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 21:02:54] 2024-05-19 04:02:35,245 | INFO     | sufficient remaining disk space (1785087393792 B)
[2024-05-18 21:02:54] 2024-05-19 04:02:35,245 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 21:02:54] 2024-05-19 04:02:35,246 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 21:02:54] 2024-05-19 04:02:35,246 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 21:02:54] 2024-05-19 04:02:35,246 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 21:02:54] 2024-05-19 04:02:35,247 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 21:02:54] 2024-05-19 04:02:35,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 21:02:54] 2024-05-19 04:02:35,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 21:02:54] 2024-05-19 04:02:35,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 21:02:54] 2024-05-19 04:02:35,560 | INFO     | aborting loop
[2024-05-18 21:02:54] 2024-05-19 04:02:36,251 | INFO     | [job] retrieve thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:36,290 | INFO     | all data control threads have been joined
[2024-05-18 21:02:54] 2024-05-19 04:02:36,473 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:36,563 | INFO     | [job] job monitor thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:36,591 | INFO     | all job control threads have been joined
[2024-05-18 21:02:54] 2024-05-19 04:02:36,601 | INFO     | all payload control threads have been joined
[2024-05-18 21:02:54] 2024-05-19 04:02:36,660 | INFO     | [job] validate thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:37,009 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 21:02:54] 2024-05-19 04:02:37,069 | INFO     | [payload] failed_post thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:37,246 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:37,251 | INFO     | [data] copytool_out thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:37,295 | INFO     | [data] control thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:37,570 | INFO     | [payload] validate_post thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:37,597 | INFO     | [job] control thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:37,601 | INFO     | [payload] control thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:37,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 21:02:54] 2024-05-19 04:02:37,701 | INFO     | [data] copytool_in thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:37,740 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:38,015 | INFO     | [job] queue monitor thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:41,662 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:45,437 | INFO     | job.realtimelogging is not enabled
[2024-05-18 21:02:54] 2024-05-19 04:02:46,439 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 21:02:54] 2024-05-19 04:02:48,238 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140590055835456)>', '<ExcThread(monitor, started 140589496522496)>']
[2024-05-18 21:02:54] 2024-05-19 04:02:48,301 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 21:02:54] 2024-05-19 04:02:48,301 | INFO     | [monitor] control thread has ended
[2024-05-18 21:02:54] 2024-05-19 04:02:53,262 | INFO     | all workflow threads have been joined
[2024-05-18 21:02:54] 2024-05-19 04:02:53,263 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 21:02:54] 2024-05-19 04:02:53,263 | INFO     | traces error code: 0
[2024-05-18 21:02:54] 2024-05-19 04:02:53,264 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 21:02:54] 2024-05-19 04:02:53,390 [wrapper] ==== pilot stdout END ====
[2024-05-18 21:02:54] 2024-05-19 04:02:53,394 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 21:02:54] 2024-05-19 04:02:53,398 [wrapper] pilotpid: 170766
[2024-05-18 21:02:54] 2024-05-19 04:02:53,401 [wrapper] Pilot exit status: 0
[2024-05-18 21:02:54] 2024-05-19 04:02:53,425 [wrapper] pandaids: 6209183481
[2024-05-18 21:02:54] 2024-05-19 04:02:53,529 [wrapper] cleanup: SIGTERM to supervisor_pilot 205971 170767
[2024-05-18 21:02:54] 2024-05-19 04:02:53,532 [wrapper] Test setup, not cleaning
[2024-05-18 21:02:54] 2024-05-19 04:02:53,533 [wrapper] ==== wrapper stdout END ====
[2024-05-18 21:02:54] 2024-05-19 04:02:53,535 [wrapper] ==== wrapper stderr END ====
[2024-05-18 21:02:54] 2024-05-19 04:02:53,538 [wrapper] apfmon messages muted
[2024-05-18 21:02:54]  *** Error codes and diagnostics ***
[2024-05-18 21:02:54]     "exeErrorCode": 0,
[2024-05-18 21:02:54]     "exeErrorDiag": "",
[2024-05-18 21:02:54]     "pilotErrorCode": 0,
[2024-05-18 21:02:54]     "pilotErrorDiag": "",
[2024-05-18 21:02:54]  *** Listing of results directory ***
[2024-05-18 21:02:54] total 831484
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc    467845 May 18 12:45 pilot3.tar.gz
[2024-05-18 21:02:54] -rwx------ 1 boinc boinc     32251 May 18 12:58 runpilot2-wrapper.sh
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc      5633 May 18 12:58 queuedata.json
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc       100 May 18 19:33 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 21:02:54] -rwxr-xr-x 1 boinc boinc      7986 May 18 19:33 run_atlas
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc       105 May 18 19:33 job.xml
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc      6626 May 18 19:33 init_data.xml
[2024-05-18 21:02:54] -rw-r--r-- 2 boinc boinc 599413543 May 18 19:33 EVNT.38776119._000499.pool.root.1
[2024-05-18 21:02:54] -rw-r--r-- 2 boinc boinc    480007 May 18 19:33 input.tar.gz
[2024-05-18 21:02:54] -rw-r--r-- 2 boinc boinc     17537 May 18 19:33 start_atlas.sh
[2024-05-18 21:02:54] drwxrwx--x 2 boinc boinc      4096 May 18 19:33 shared
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc         0 May 18 19:33 boinc_lockfile
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc      2635 May 18 19:33 pandaJob.out
[2024-05-18 21:02:54] -rw------- 1 boinc boinc       424 May 18 19:33 setup.sh.local
[2024-05-18 21:02:54] -rw------- 1 boinc boinc   1013712 May 18 19:33 agis_schedconf.cvmfs.json
[2024-05-18 21:02:54] -rw------- 1 boinc boinc         0 May 18 19:33 agis_ddmendpoints.agis.ALL.json
[2024-05-18 21:02:54] -rw------- 1 boinc boinc   1324701 May 18 19:33 cric_ddmendpoints.json
[2024-05-18 21:02:54] drwx------ 4 boinc boinc      4096 May 18 19:33 pilot3
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc       530 May 18 21:01 boinc_task_state.xml
[2024-05-18 21:02:54] -rw------- 1 boinc boinc 246771469 May 18 21:01 HITS.38776125._018635.pool.root.1
[2024-05-18 21:02:54] -rw------- 1 boinc boinc        95 May 18 21:02 pilot_heartbeat.json
[2024-05-18 21:02:54] -rw------- 1 boinc boinc      1067 May 18 21:02 memory_monitor_summary.json
[2024-05-18 21:02:54] -rw------- 1 boinc boinc    375876 May 18 21:02 log.38776125._018635.job.log.tgz.1
[2024-05-18 21:02:54] -rw------- 1 boinc boinc      7792 May 18 21:02 heartbeat.json
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc      8192 May 18 21:02 boinc_mmap_file
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc        27 May 18 21:02 wrapper_checkpoint.txt
[2024-05-18 21:02:54] -rw------- 1 boinc boinc      4405 May 18 21:02 pilotlog.txt
[2024-05-18 21:02:54] -rw------- 1 boinc boinc    489690 May 18 21:02 log.38776125._018635.job.log.1
[2024-05-18 21:02:54] -rw------- 1 boinc boinc       357 May 18 21:02 output.list
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc       620 May 18 21:02 runtime_log
[2024-05-18 21:02:54] -rw------- 1 boinc boinc    880640 May 18 21:02 result.tar.gz
[2024-05-18 21:02:54] -rw------- 1 boinc boinc       654 May 18 21:02 vcsKDmdNfS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmgGMKDmVEd10m.diag
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc     11286 May 18 21:02 runtime_log.err
[2024-05-18 21:02:54] -rw-r--r-- 1 boinc boinc     21339 May 18 21:02 stderr.txt
[2024-05-18 21:02:54] HITS file was successfully produced:
[2024-05-18 21:02:54] -rw------- 1 boinc boinc 246771469 May 18 21:01 shared/HITS.pool.root.1
[2024-05-18 21:02:54]  *** Contents of shared directory: ***
[2024-05-18 21:02:54] total 827716
[2024-05-18 21:02:54] -rw-r--r-- 2 boinc boinc 599413543 May 18 19:33 ATLAS.root_0
[2024-05-18 21:02:54] -rw-r--r-- 2 boinc boinc    480007 May 18 19:33 input.tar.gz
[2024-05-18 21:02:54] -rw-r--r-- 2 boinc boinc     17537 May 18 19:33 start_atlas.sh
[2024-05-18 21:02:54] -rw------- 1 boinc boinc 246771469 May 18 21:01 HITS.pool.root.1
[2024-05-18 21:02:54] -rw------- 1 boinc boinc    880640 May 18 21:02 result.tar.gz
21:02:55 (166602): run_atlas exited; CPU time 32896.626968
21:02:55 (166602): called boinc_finish(0)

</stderr_txt>
]]>

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