Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
19:40:48 (241165): wrapper (7.7.26015): starting
19:40:48 (241165): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 19:40:48] Arguments: --nthreads 12
[2024-05-19 19:40:48] Threads: 12
[2024-05-19 19:40:48] Checking for CVMFS
[2024-05-19 19:40:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 19:40:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 19:40:48] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 19:40:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 19:40:49] 2.10.1.0 136058 187208 213040 132933 2 99 25517675 45568001 5605 130560 0 607427871 99.726 430104860 13930 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-19 19:40:49] CVMFS is ok
[2024-05-19 19:40:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 19:40:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 19:40:49] Further information can be found at the LHC@home message board.
[2024-05-19 19:40:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 19:40:49] Checking for apptainer binary...
[2024-05-19 19:40:49] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 19:40:49] Running /usr/bin/apptainer --version
[2024-05-19 19:40:49] apptainer version 1.1.8-1.el7
[2024-05-19 19:40:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 19:40:50] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0039.triumf.lcg
[2024-05-19 19:40:50] apptainer works
[2024-05-19 19:40:50] Set ATHENA_PROC_NUMBER=12
[2024-05-19 19:40:50] Set ATHENA_CORE_NUMBER=12
[2024-05-19 19:40:50] Starting ATLAS job with PandaID=6209182965
[2024-05-19 19:40:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 21:17:00]  *** The last 200 lines of the pilot log: ***
[2024-05-19 21:17:00]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-19 21:17:00]  is_tar=False
[2024-05-19 21:17:00]  lfn=log.38776125._018595.job.log.tgz.1
[2024-05-19 21:17:00]  mtime=0
[2024-05-19 21:17:00]  protocol_id=None
[2024-05-19 21:17:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 21:17:00]  replicas=None
[2024-05-19 21:17:00]  scope=mc23_13p6TeV
[2024-05-19 21:17:00]  status=None
[2024-05-19 21:17:00]  status_code=0
[2024-05-19 21:17:00]  storage_token=
[2024-05-19 21:17:00]  surl=/home/boinc/slots/0/PanDA_Pilot-6209182965/log.38776125._018595.job.log.tgz.1
[2024-05-19 21:17:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/06/log.38776125._018595.job.log.tgz.1
[2024-05-19 21:17:00]  workdir=None
[2024-05-19 21:17:00] ]
[2024-05-19 21:17:00] 2024-05-20 04:16:28,583 | INFO     | transferring file log.38776125._018595.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209182965/log.38776125._018595.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-19 21:17:00] 2024-05-20 04:16:28,583 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209182965/log.38776125._018595.job.log.tgz.1 /home/boinc/slots/0/log.38776125._018595.job.log.t
[2024-05-19 21:17:00] 2024-05-20 04:16:28,609 | INFO     | adding to output.list: log.38776125._018595.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/06/log.38776125._018595.job.log.tg
[2024-05-19 21:17:00] 2024-05-20 04:16:28,610 | INFO     | summary of transferred files:
[2024-05-19 21:17:00] 2024-05-20 04:16:28,610 | INFO     |  -- lfn=log.38776125._018595.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 21:17:00] 2024-05-20 04:16:28,610 | INFO     | stage-out finished correctly
[2024-05-19 21:17:00] 2024-05-20 04:16:29,891 | WARNING  | process 251698 is no longer using CPU - aborting
[2024-05-19 21:17:00] 2024-05-20 04:16:29,891 | INFO     | will not send any job update
[2024-05-19 21:17:00] 2024-05-20 04:16:32,055 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 21:17:00] 2024-05-20 04:16:32,396 | INFO     | monitor loop #417: job 0:6209182965 is in state 'finished'
[2024-05-19 21:17:00] 2024-05-20 04:16:32,397 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 21:17:00] 2024-05-20 04:16:33,330 | INFO     | job 6209182965 has state=finished
[2024-05-19 21:17:00] 2024-05-20 04:16:33,330 | INFO     | preparing for final server update for job 6209182965 in state='finished'
[2024-05-19 21:17:00] 2024-05-20 04:16:33,331 | INFO     | this job has now completed (state=finished)
[2024-05-19 21:17:00] 2024-05-20 04:16:33,331 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 21:17:00] 2024-05-20 04:16:33,331 | INFO     | job 6209182965 has finished - writing final server update
[2024-05-19 21:17:00] 2024-05-20 04:16:33,331 | INFO     | total number of processed events: 400 (read)
[2024-05-19 21:17:00] 2024-05-20 04:16:33,335 | INFO     | executing command: lscpu
[2024-05-19 21:17:00] 2024-05-20 04:16:33,401 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-19 21:17:00] 2024-05-20 04:16:33,402 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 21:17:00] 2024-05-20 04:16:33,452 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 21:17:00] 2024-05-20 04:16:34,900 | INFO     | monitor loop #418: job 0:6209182965 is in state 'finished'
[2024-05-19 21:17:00] 2024-05-20 04:16:34,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 21:17:00] 2024-05-20 04:16:37,402 | INFO     | monitor loop #419: job 0:6209182965 is in state 'finished'
[2024-05-19 21:17:00] 2024-05-20 04:16:37,403 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 21:17:00] 2024-05-20 04:16:38,823 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 21:17:00] 2024-05-20 04:16:38,824 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209182965/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 21:17:00] 2024-05-20 04:16:38,824 | INFO     | extracted standard info from prmon json
[2024-05-19 21:17:00] 2024-05-20 04:16:38,824 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 21:17:00] 2024-05-20 04:16:38,824 | WARNING  | GPU info not found in prmon json
[2024-05-19 21:17:00] 2024-05-20 04:16:38,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 21:17:00] 2024-05-20 04:16:38,825 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 21:17:00] 2024-05-20 04:16:38,826 | INFO     | fitting pss+swap vs Time
[2024-05-19 21:17:00] 2024-05-20 04:16:38,826 | INFO     | model: linear, x: [1716173192.0, 1716173253.0, 1716173314.0, 1716173375.0, 1716173436.0, 1716173497.0, 1716173558.0, 1716173619.0, 1716173680.0, 1716173741.0, 1716
[2024-05-19 21:17:00] 2024-05-20 04:16:38,826 | INFO     | sum of square deviations: 204178510.4137928
[2024-05-19 21:17:00] 2024-05-20 04:16:38,826 | INFO     | sum of deviations: 22220267755.44827
[2024-05-19 21:17:00] 2024-05-20 04:16:38,826 | INFO     | mean x: 1716175815.1724138
[2024-05-19 21:17:00] 2024-05-20 04:16:38,826 | INFO     | mean y: 2672924.436781609
[2024-05-19 21:17:00] 2024-05-20 04:16:38,826 | INFO     | -- intersect: -186764710436.68552
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | intersect: -186764710436.68552
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | chi2: 2.3996557114003383
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | -- intersect: -186764710436.68552
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | current memory leak: 108.83 B/s (using 87 data points, chi2=2.40)
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | ..............................
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | . Timing measurements:
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | . get job = 0 s
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | . initial setup = 2 s
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | . payload setup = 6 s
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | . stage-in = 0 s
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | . payload execution = 5702 s
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | . stage-out = 0 s
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | . log creation = 0 s
[2024-05-19 21:17:00] 2024-05-20 04:16:38,827 | INFO     | ..............................
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | 
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | job summary report
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | --------------------------------------------------
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | PanDA job id: 6209182965
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | task id: 38776125
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | errors: (none)
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | pilot state: finished 
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | transexitcode: 0
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | exeerrorcode: 0
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | exeerrordiag: 
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | exitcode: 0
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | exitmsg: OK
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | cpuconsumptiontime: 32192 s
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | nevents: 400
[2024-05-19 21:17:00] 2024-05-20 04:16:38,880 | INFO     | neventsw: 0
[2024-05-19 21:17:00] 2024-05-20 04:16:38,881 | INFO     | pid: 251698
[2024-05-19 21:17:00] 2024-05-20 04:16:38,881 | INFO     | pgrp: 251698
[2024-05-19 21:17:00] 2024-05-20 04:16:38,881 | INFO     | corecount: 12
[2024-05-19 21:17:00] 2024-05-20 04:16:38,881 | INFO     | event service: False
[2024-05-19 21:17:00] 2024-05-20 04:16:38,881 | INFO     | sizes: {0: 2391236, 1: 2392171, 5: 2392377, 12: 2392433, 5711: 2419024, 5712: 2427978, 5716: 2428162, 5722: 2428332}
[2024-05-19 21:17:00] 2024-05-20 04:16:38,881 | INFO     | --------------------------------------------------
[2024-05-19 21:17:00] 2024-05-20 04:16:38,881 | INFO     | 
[2024-05-19 21:17:00] 2024-05-20 04:16:38,881 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 21:17:00] 2024-05-20 04:16:38,920 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,920 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,920 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,920 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,920 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,920 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | job 6209182965 has completed (purged errors)
[2024-05-19 21:17:00] 2024-05-20 04:16:38,921 | INFO     | overall cleanup function is called
[2024-05-19 21:17:00] 2024-05-20 04:16:39,925 | INFO     | --- collectZombieJob: --- 10, [251698]
[2024-05-19 21:17:00] 2024-05-20 04:16:39,926 | INFO     | zombie collector waiting for pid 251698
[2024-05-19 21:17:00] 2024-05-20 04:16:39,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 21:17:00] 2024-05-20 04:16:40,931 | INFO     | collected zombie processes
[2024-05-19 21:17:00] 2024-05-20 04:16:40,932 | INFO     | will now attempt to kill all subprocesses of pid=251698
[2024-05-19 21:17:00] 2024-05-20 04:16:41,007 | INFO     | process IDs to be killed: [251698] (in reverse order)
[2024-05-19 21:17:00] 2024-05-20 04:16:41,111 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 21:17:00] 2024-05-20 04:16:41,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 21:17:00] 2024-05-20 04:16:41,117 | INFO     | did not find any defunct processes belonging to 251698
[2024-05-19 21:17:00] 2024-05-20 04:16:41,122 | INFO     | did not find any defunct processes belonging to 251698
[2024-05-19 21:17:00] 2024-05-20 04:16:41,122 | INFO     | ready for new job
[2024-05-19 21:17:00] 2024-05-20 04:16:41,122 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 21:17:00] 2024-05-20 04:16:41,123 | INFO     | *************************************
[2024-05-19 21:17:00] 2024-05-20 04:16:41,124 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 21:17:00] 2024-05-20 04:16:41,124 | INFO     | *************************************
[2024-05-19 21:17:00] 2024-05-20 04:16:41,124 | INFO     | 
[2024-05-19 21:17:00] 2024-05-20 04:16:41,127 | INFO     | architecture information:
[2024-05-19 21:17:00] 2024-05-20 04:16:41,127 | INFO     | executing command: cat /etc/os-release
[2024-05-19 21:17:00] 2024-05-20 04:16:41,147 | INFO     | cat /etc/os-release:
[2024-05-19 21:17:00] NAME="CentOS Linux"
[2024-05-19 21:17:00] VERSION="7 (Core)"
[2024-05-19 21:17:00] ID="centos"
[2024-05-19 21:17:00] ID_LIKE="rhel fedora"
[2024-05-19 21:17:00] VERSION_ID="7"
[2024-05-19 21:17:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 21:17:00] ANSI_COLOR="0;31"
[2024-05-19 21:17:00] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 21:17:00] HOME_URL="https://www.centos.org/"
[2024-05-19 21:17:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 21:17:00] 
[2024-05-19 21:17:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 21:17:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 21:17:00] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 21:17:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 21:17:00] 
[2024-05-19 21:17:00] 2024-05-20 04:16:41,148 | INFO     | *************************************
[2024-05-19 21:17:00] 2024-05-20 04:16:41,651 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 21:17:00] 2024-05-20 04:16:41,675 | INFO     | sufficient remaining disk space (2162238160896 B)
[2024-05-19 21:17:00] 2024-05-20 04:16:41,675 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 21:17:00] 2024-05-20 04:16:41,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 21:17:00] 2024-05-20 04:16:41,676 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 21:17:00] 2024-05-20 04:16:41,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 21:17:00] 2024-05-20 04:16:41,677 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 21:17:00] 2024-05-20 04:16:41,677 | INFO     | aborting loop
[2024-05-19 21:17:00] 2024-05-20 04:16:41,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 21:17:00] 2024-05-20 04:16:41,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 21:17:00] 2024-05-20 04:16:41,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 21:17:00] 2024-05-20 04:16:41,901 | INFO     | all data control threads have been joined
[2024-05-19 21:17:00] 2024-05-20 04:16:42,593 | INFO     | all job control threads have been joined
[2024-05-19 21:17:00] 2024-05-20 04:16:42,681 | INFO     | [job] retrieve thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:42,682 | INFO     | [job] job monitor thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:42,697 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 21:17:00] 2024-05-20 04:16:42,907 | INFO     | [data] control thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:42,940 | INFO     | [data] copytool_in thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:42,997 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:43,080 | INFO     | all payload control threads have been joined
[2024-05-19 21:17:00] 2024-05-20 04:16:43,159 | INFO     | [payload] validate_post thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:43,260 | INFO     | [payload] failed_post thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:43,599 | INFO     | [job] control thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:43,701 | INFO     | [data] copytool_out thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:43,727 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:43,892 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 21:17:00] 2024-05-20 04:16:43,932 | INFO     | [job] validate thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:44,035 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:44,089 | INFO     | [payload] control thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:44,897 | INFO     | [job] queue monitor thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:46,705 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:52,200 | INFO     | job.realtimelogging is not enabled
[2024-05-19 21:17:00] 2024-05-20 04:16:53,204 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 21:17:00] 2024-05-20 04:16:54,776 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741340432192)>', '<ExcThread(monitor, started 139740787504896)>']
[2024-05-19 21:17:00] 2024-05-20 04:16:55,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 21:17:00] 2024-05-20 04:16:55,748 | INFO     | [monitor] control thread has ended
[2024-05-19 21:17:00] 2024-05-20 04:16:59,802 | INFO     | all workflow threads have been joined
[2024-05-19 21:17:00] 2024-05-20 04:16:59,803 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 21:17:00] 2024-05-20 04:16:59,803 | INFO     | traces error code: 0
[2024-05-19 21:17:00] 2024-05-20 04:16:59,803 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 21:17:00] 2024-05-20 04:16:59,947 [wrapper] ==== pilot stdout END ====
[2024-05-19 21:17:00] 2024-05-20 04:16:59,949 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 21:17:00] 2024-05-20 04:16:59,991 [wrapper] pilotpid: 245311
[2024-05-19 21:17:00] 2024-05-20 04:16:59,993 [wrapper] Pilot exit status: 0
[2024-05-19 21:17:00] 2024-05-20 04:17:00,028 [wrapper] pandaids: 6209182965
[2024-05-19 21:17:00] 2024-05-20 04:17:00,082 [wrapper] cleanup: SIGTERM to supervisor_pilot 167922 245312
[2024-05-19 21:17:00] 2024-05-20 04:17:00,085 [wrapper] Test setup, not cleaning
[2024-05-19 21:17:00] 2024-05-20 04:17:00,087 [wrapper] ==== wrapper stdout END ====
[2024-05-19 21:17:00] 2024-05-20 04:17:00,089 [wrapper] ==== wrapper stderr END ====
[2024-05-19 21:17:00] 2024-05-20 04:17:00,127 [wrapper] apfmon messages muted
[2024-05-19 21:17:00]  *** Error codes and diagnostics ***
[2024-05-19 21:17:00]     "exeErrorCode": 0,
[2024-05-19 21:17:00]     "exeErrorDiag": "",
[2024-05-19 21:17:00]     "pilotErrorCode": 0,
[2024-05-19 21:17:00]     "pilotErrorDiag": "",
[2024-05-19 21:17:00]  *** Listing of results directory ***
[2024-05-19 21:17:00] total 827424
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc    467845 May 18 12:45 pilot3.tar.gz
[2024-05-19 21:17:00] -rwx------ 1 boinc boinc     32251 May 18 12:58 runpilot2-wrapper.sh
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc      5633 May 18 12:58 queuedata.json
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc       100 May 19 19:40 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 21:17:00] -rwxr-xr-x 1 boinc boinc      7986 May 19 19:40 run_atlas
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc       105 May 19 19:40 job.xml
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc      6628 May 19 19:40 init_data.xml
[2024-05-19 21:17:00] -rw-r--r-- 2 boinc boinc 596221194 May 19 19:40 EVNT.38776119._000497.pool.root.1
[2024-05-19 21:17:00] -rw-r--r-- 2 boinc boinc     17537 May 19 19:40 start_atlas.sh
[2024-05-19 21:17:00] drwxrwx--x 2 boinc boinc      4096 May 19 19:40 shared
[2024-05-19 21:17:00] -rw-r--r-- 2 boinc boinc    480000 May 19 19:40 input.tar.gz
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc         0 May 19 19:40 boinc_lockfile
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc      2634 May 19 19:40 pandaJob.out
[2024-05-19 21:17:00] -rw------- 1 boinc boinc       424 May 19 19:40 setup.sh.local
[2024-05-19 21:17:00] -rw------- 1 boinc boinc   1013685 May 19 19:40 agis_schedconf.cvmfs.json
[2024-05-19 21:17:00] -rw------- 1 boinc boinc         0 May 19 19:40 agis_ddmendpoints.agis.ALL.json
[2024-05-19 21:17:00] -rw------- 1 boinc boinc   1324701 May 19 19:40 cric_ddmendpoints.json
[2024-05-19 21:17:00] drwx------ 4 boinc boinc      4096 May 19 19:41 pilot3
[2024-05-19 21:17:00] -rw------- 1 boinc boinc 245748629 May 19 21:15 HITS.38776125._018595.pool.root.1
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc       530 May 19 21:15 boinc_task_state.xml
[2024-05-19 21:17:00] -rw------- 1 boinc boinc      1054 May 19 21:16 memory_monitor_summary.json
[2024-05-19 21:17:00] -rw------- 1 boinc boinc    359082 May 19 21:16 log.38776125._018595.job.log.tgz.1
[2024-05-19 21:17:00] -rw------- 1 boinc boinc      7770 May 19 21:16 heartbeat.json
[2024-05-19 21:17:00] -rw------- 1 boinc boinc        95 May 19 21:16 pilot_heartbeat.json
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc      8192 May 19 21:16 boinc_mmap_file
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc        27 May 19 21:16 wrapper_checkpoint.txt
[2024-05-19 21:17:00] -rw------- 1 boinc boinc      4405 May 19 21:16 pilotlog.txt
[2024-05-19 21:17:00] -rw------- 1 boinc boinc    529874 May 19 21:17 log.38776125._018595.job.log.1
[2024-05-19 21:17:00] -rw------- 1 boinc boinc       357 May 19 21:17 output.list
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc       620 May 19 21:17 runtime_log
[2024-05-19 21:17:00] -rw------- 1 boinc boinc    911360 May 19 21:17 result.tar.gz
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc     11286 May 19 21:17 runtime_log.err
[2024-05-19 21:17:00] -rw------- 1 boinc boinc       653 May 19 21:17 eMhKDmdNfS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmcGMKDmfLoyhn.diag
[2024-05-19 21:17:00] -rw-r--r-- 1 boinc boinc     21839 May 19 21:17 stderr.txt
[2024-05-19 21:17:00] HITS file was successfully produced:
[2024-05-19 21:17:00] -rw------- 1 boinc boinc 245748629 May 19 21:15 shared/HITS.pool.root.1
[2024-05-19 21:17:00]  *** Contents of shared directory: ***
[2024-05-19 21:17:00] total 823632
[2024-05-19 21:17:00] -rw-r--r-- 2 boinc boinc 596221194 May 19 19:40 ATLAS.root_0
[2024-05-19 21:17:00] -rw-r--r-- 2 boinc boinc     17537 May 19 19:40 start_atlas.sh
[2024-05-19 21:17:00] -rw-r--r-- 2 boinc boinc    480000 May 19 19:40 input.tar.gz
[2024-05-19 21:17:00] -rw------- 1 boinc boinc 245748629 May 19 21:15 HITS.pool.root.1
[2024-05-19 21:17:00] -rw------- 1 boinc boinc    911360 May 19 21:17 result.tar.gz
21:17:02 (241165): run_atlas exited; CPU time 32074.936228
21:17:02 (241165): called boinc_finish(0)

</stderr_txt>
]]>

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