Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
09:03:05 (199418): wrapper (7.7.26015): starting
09:03:05 (199418): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 09:03:05] Arguments: --nthreads 12
[2024-05-19 09:03:05] Threads: 12
[2024-05-19 09:03:05] Checking for CVMFS
[2024-05-19 09:03:05] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 09:03:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 09:03:05] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 09:03:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 09:03:05] 2.10.1.0 22983 186570 140572 132918 1 373 28349940 45568001 10713 130560 0 1170964955 99.754 710138952 16916 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-19 09:03:05] CVMFS is ok
[2024-05-19 09:03:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 09:03:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 09:03:05] Further information can be found at the LHC@home message board.
[2024-05-19 09:03:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 09:03:05] Checking for apptainer binary...
[2024-05-19 09:03:05] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 09:03:05] Running /usr/bin/apptainer --version
[2024-05-19 09:03:05] apptainer version 1.1.8-1.el7
[2024-05-19 09:03:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 09:03:06] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0049.triumf.lcg
[2024-05-19 09:03:06] apptainer works
[2024-05-19 09:03:06] Set ATHENA_PROC_NUMBER=12
[2024-05-19 09:03:06] Set ATHENA_CORE_NUMBER=12
[2024-05-19 09:03:06] Starting ATLAS job with PandaID=6209149085
[2024-05-19 09:03:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 13:05:39]  *** The last 200 lines of the pilot log: ***
[2024-05-19 13:05:39] 2024-05-19 20:05:23,378 | INFO     | intersect: -58250731309.15551
[2024-05-19 13:05:39] 2024-05-19 20:05:23,378 | INFO     | chi2: 5.444527937597998
[2024-05-19 13:05:39] 2024-05-19 20:05:23,379 | INFO     | model: linear, x: [1716134617.0, 1716134678.0, 1716134739.0, 1716134800.0, 1716134861.0, 1716134922.0, 1716134983.0, 1716135044.0, 1716135105.0, 1716135166.0, 1716
[2024-05-19 13:05:39] 2024-05-19 20:05:23,379 | INFO     | sum of square deviations: 3924400742.137329
[2024-05-19 13:05:39] 2024-05-19 20:05:23,381 | INFO     | sum of deviations: 138940275954.14597
[2024-05-19 13:05:39] 2024-05-19 20:05:23,381 | INFO     | mean x: 1716141696.1287553
[2024-05-19 13:05:39] 2024-05-19 20:05:23,381 | INFO     | mean y: 2663537.261802575
[2024-05-19 13:05:39] 2024-05-19 20:05:23,381 | INFO     | -- intersect: -60755963449.1056
[2024-05-19 13:05:39] 2024-05-19 20:05:23,381 | INFO     | intersect: -60755963449.1056
[2024-05-19 13:05:39] 2024-05-19 20:05:23,381 | INFO     | chi2: 5.44623786208739
[2024-05-19 13:05:39] 2024-05-19 20:05:23,381 | INFO     | current chi2=5.44623786208739 (change=-0.03140629470524946 %)
[2024-05-19 13:05:39] 2024-05-19 20:05:23,382 | INFO     | right removable region: 232
[2024-05-19 13:05:39] 2024-05-19 20:05:23,382 | INFO     | model: linear, x: [1716134922.0, 1716134983.0, 1716135044.0, 1716135105.0, 1716135166.0, 1716135227.0, 1716135288.0, 1716135349.0, 1716135410.0, 1716135471.0, 1716
[2024-05-19 13:05:39] 2024-05-19 20:05:23,382 | INFO     | sum of square deviations: 3924163446.3090167
[2024-05-19 13:05:39] 2024-05-19 20:05:23,384 | INFO     | sum of deviations: 75740339531.65234
[2024-05-19 13:05:39] 2024-05-19 20:05:23,384 | INFO     | mean x: 1716142001.193133
[2024-05-19 13:05:39] 2024-05-19 20:05:23,384 | INFO     | mean y: 2704381.407725322
[2024-05-19 13:05:39] 2024-05-19 20:05:23,384 | INFO     | -- intersect: -33120578996.901787
[2024-05-19 13:05:39] 2024-05-19 20:05:23,384 | INFO     | intersect: -33120578996.901787
[2024-05-19 13:05:39] 2024-05-19 20:05:23,385 | INFO     | chi2: 2.748233329604225
[2024-05-19 13:05:39] 2024-05-19 20:05:23,385 | INFO     | current chi2=2.748233329604225 (change=49.523019055042575 %)
[2024-05-19 13:05:39] 2024-05-19 20:05:23,385 | INFO     | model: linear, x: [1716135227.0, 1716135288.0, 1716135349.0, 1716135410.0, 1716135471.0, 1716135532.0, 1716135593.0, 1716135654.0, 1716135715.0, 1716135776.0, 1716
[2024-05-19 13:05:39] 2024-05-19 20:05:23,385 | INFO     | sum of square deviations: 3676806259.210519
[2024-05-19 13:05:39] 2024-05-19 20:05:23,387 | INFO     | sum of deviations: 22313898995.657887
[2024-05-19 13:05:39] 2024-05-19 20:05:23,387 | INFO     | mean x: 1716142153.7631578
[2024-05-19 13:05:39] 2024-05-19 20:05:23,387 | INFO     | mean y: 2737359.5307017546
[2024-05-19 13:05:39] 2024-05-19 20:05:23,387 | INFO     | -- intersect: -10412231497.023712
[2024-05-19 13:05:39] 2024-05-19 20:05:23,387 | INFO     | intersect: -10412231497.023712
[2024-05-19 13:05:39] 2024-05-19 20:05:23,388 | INFO     | chi2: 1.1018717411546683
[2024-05-19 13:05:39] 2024-05-19 20:05:23,388 | INFO     | current chi2=1.1018717411546683 (change=59.9061793885838 %)
[2024-05-19 13:05:39] 2024-05-19 20:05:23,388 | INFO     | model: linear, x: [1716135532.0, 1716135593.0, 1716135654.0, 1716135715.0, 1716135776.0, 1716135837.0, 1716135898.0, 1716135959.0, 1716136020.0, 1716136081.0, 1716
[2024-05-19 13:05:39] 2024-05-19 20:05:23,388 | INFO     | sum of square deviations: 3440053919.7757688
[2024-05-19 13:05:39] 2024-05-19 20:05:23,390 | INFO     | sum of deviations: -17066170663.0583
[2024-05-19 13:05:39] 2024-05-19 20:05:23,390 | INFO     | mean x: 1716142306.3363228
[2024-05-19 13:05:39] 2024-05-19 20:05:23,390 | INFO     | mean y: 2762599.5874439464
[2024-05-19 13:05:39] 2024-05-19 20:05:23,390 | INFO     | -- intersect: 8516576093.516408
[2024-05-19 13:05:39] 2024-05-19 20:05:23,390 | INFO     | intersect: 8516576093.516408
[2024-05-19 13:05:39] 2024-05-19 20:05:23,391 | INFO     | chi2: 0.018051136252394295
[2024-05-19 13:05:39] 2024-05-19 20:05:23,391 | INFO     | current chi2=0.018051136252394295 (change=98.36177518869135 %)
[2024-05-19 13:05:39] 2024-05-19 20:05:23,391 | INFO     | model: linear, x: [1716135837.0, 1716135898.0, 1716135959.0, 1716136020.0, 1716136081.0, 1716136142.0, 1716136203.0, 1716136264.0, 1716136325.0, 1716136386.0, 1716
[2024-05-19 13:05:39] 2024-05-19 20:05:23,391 | INFO     | sum of square deviations: 3213673865.344042
[2024-05-19 13:05:39] 2024-05-19 20:05:23,393 | INFO     | sum of deviations: -17624280867.63761
[2024-05-19 13:05:39] 2024-05-19 20:05:23,393 | INFO     | mean x: 1716142458.912844
[2024-05-19 13:05:39] 2024-05-19 20:05:23,393 | INFO     | mean y: 2762966.3348623854
[2024-05-19 13:05:39] 2024-05-19 20:05:23,393 | INFO     | -- intersect: 9414351687.556957
[2024-05-19 13:05:39] 2024-05-19 20:05:23,393 | INFO     | intersect: 9414351687.556957
[2024-05-19 13:05:39] 2024-05-19 20:05:23,393 | INFO     | chi2: 0.01554532540271032
[2024-05-19 13:05:39] 2024-05-19 20:05:23,393 | INFO     | current chi2=0.01554532540271032 (change=13.881734726541689 %)
[2024-05-19 13:05:39] 2024-05-19 20:05:23,393 | INFO     | left removable region: 40
[2024-05-19 13:05:39] 2024-05-19 20:05:23,394 | INFO     | model: linear, x: [1716137057.0, 1716137118.0, 1716137179.0, 1716137240.0, 1716137301.0, 1716137362.0, 1716137423.0, 1716137484.0, 1716137545.0, 1716137606.0, 1716
[2024-05-19 13:05:39] 2024-05-19 20:05:23,394 | INFO     | sum of square deviations: 2195065200.078125
[2024-05-19 13:05:39] 2024-05-19 20:05:23,395 | INFO     | sum of deviations: -10855318783.718758
[2024-05-19 13:05:39] 2024-05-19 20:05:23,395 | INFO     | mean x: 1716142886.296875
[2024-05-19 13:05:39] 2024-05-19 20:05:23,395 | INFO     | mean y: 2758351.1354166665
[2024-05-19 13:05:39] 2024-05-19 20:05:23,395 | INFO     | -- intersect: 8489648903.86285
[2024-05-19 13:05:39] 2024-05-19 20:05:23,395 | INFO     | intersect: 8489648903.86285
[2024-05-19 13:05:39] 2024-05-19 20:05:23,396 | INFO     | chi2: 0.014194403978189524
[2024-05-19 13:05:39] 2024-05-19 20:05:23,396 | INFO     | -- intersect: 8489648903.86285
[2024-05-19 13:05:39] 2024-05-19 20:05:23,396 | INFO     | current memory leak: -4.95 B/s (using 192 data points, chi2=0.01)
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | ..............................
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | . Timing measurements:
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | . get job = 0 s
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | . initial setup = 1 s
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | . payload setup = 4 s
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | . stage-in = 0 s
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | . payload execution = 14497 s
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | . stage-out = 1 s
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | . log creation = 0 s
[2024-05-19 13:05:39] 2024-05-19 20:05:23,397 | INFO     | ..............................
[2024-05-19 13:05:39] 2024-05-19 20:05:23,474 | INFO     | 
[2024-05-19 13:05:39] 2024-05-19 20:05:23,474 | INFO     | job summary report
[2024-05-19 13:05:39] 2024-05-19 20:05:23,474 | INFO     | --------------------------------------------------
[2024-05-19 13:05:39] 2024-05-19 20:05:23,474 | INFO     | PanDA job id: 6209149085
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | task id: 38776125
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | errors: (none)
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | pilot state: finished 
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | transexitcode: 0
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | exeerrorcode: 0
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | exeerrordiag: 
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | exitcode: 0
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | exitmsg: OK
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | cpuconsumptiontime: 33482 s
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | nevents: 400
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | neventsw: 0
[2024-05-19 13:05:39] 2024-05-19 20:05:23,475 | INFO     | pid: 209992
[2024-05-19 13:05:39] 2024-05-19 20:05:23,476 | INFO     | pgrp: 209992
[2024-05-19 13:05:39] 2024-05-19 20:05:23,476 | INFO     | corecount: 12
[2024-05-19 13:05:39] 2024-05-19 20:05:23,476 | INFO     | event service: False
[2024-05-19 13:05:39] 2024-05-19 20:05:23,476 | INFO     | sizes: {0: 2392195, 4: 2392401, 11: 2392429, 14505: 2422365, 14508: 2431375, 14514: 2431489}
[2024-05-19 13:05:39] 2024-05-19 20:05:23,476 | INFO     | --------------------------------------------------
[2024-05-19 13:05:39] 2024-05-19 20:05:23,476 | INFO     | 
[2024-05-19 13:05:39] 2024-05-19 20:05:23,476 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 13:05:39] 2024-05-19 20:05:23,498 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,499 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,499 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,499 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,500 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 13:05:39] 2024-05-19 20:05:23,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,501 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 13:05:39] 2024-05-19 20:05:23,501 | INFO     | job 6209149085 has completed (purged errors)
[2024-05-19 13:05:39] 2024-05-19 20:05:23,501 | INFO     | overall cleanup function is called
[2024-05-19 13:05:39] 2024-05-19 20:05:24,508 | INFO     | --- collectZombieJob: --- 10, [209992]
[2024-05-19 13:05:39] 2024-05-19 20:05:24,509 | INFO     | zombie collector waiting for pid 209992
[2024-05-19 13:05:39] 2024-05-19 20:05:24,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 13:05:39] 2024-05-19 20:05:25,513 | INFO     | collected zombie processes
[2024-05-19 13:05:39] 2024-05-19 20:05:25,514 | INFO     | will now attempt to kill all subprocesses of pid=209992
[2024-05-19 13:05:39] 2024-05-19 20:05:25,665 | INFO     | process IDs to be killed: [209992] (in reverse order)
[2024-05-19 13:05:39] 2024-05-19 20:05:25,758 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 13:05:39] 2024-05-19 20:05:25,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 13:05:39] 2024-05-19 20:05:25,764 | INFO     | did not find any defunct processes belonging to 209992
[2024-05-19 13:05:39] 2024-05-19 20:05:25,770 | INFO     | did not find any defunct processes belonging to 209992
[2024-05-19 13:05:39] 2024-05-19 20:05:25,770 | INFO     | ready for new job
[2024-05-19 13:05:39] 2024-05-19 20:05:25,770 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 13:05:39] 2024-05-19 20:05:25,772 | INFO     | *************************************
[2024-05-19 13:05:39] 2024-05-19 20:05:25,772 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 13:05:39] 2024-05-19 20:05:25,772 | INFO     | *************************************
[2024-05-19 13:05:39] 2024-05-19 20:05:25,772 | INFO     | 
[2024-05-19 13:05:39] 2024-05-19 20:05:25,775 | INFO     | architecture information:
[2024-05-19 13:05:39] 2024-05-19 20:05:25,775 | INFO     | executing command: cat /etc/os-release
[2024-05-19 13:05:39] 2024-05-19 20:05:25,792 | INFO     | cat /etc/os-release:
[2024-05-19 13:05:39] NAME="CentOS Linux"
[2024-05-19 13:05:39] VERSION="7 (Core)"
[2024-05-19 13:05:39] ID="centos"
[2024-05-19 13:05:39] ID_LIKE="rhel fedora"
[2024-05-19 13:05:39] VERSION_ID="7"
[2024-05-19 13:05:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 13:05:39] ANSI_COLOR="0;31"
[2024-05-19 13:05:39] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 13:05:39] HOME_URL="https://www.centos.org/"
[2024-05-19 13:05:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 13:05:39] 
[2024-05-19 13:05:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 13:05:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 13:05:39] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 13:05:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 13:05:39] 
[2024-05-19 13:05:39] 2024-05-19 20:05:25,793 | INFO     | *************************************
[2024-05-19 13:05:39] 2024-05-19 20:05:26,295 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 13:05:39] 2024-05-19 20:05:26,316 | INFO     | sufficient remaining disk space (1939344457728 B)
[2024-05-19 13:05:39] 2024-05-19 20:05:26,316 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 13:05:39] 2024-05-19 20:05:26,316 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 13:05:39] 2024-05-19 20:05:26,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 13:05:39] 2024-05-19 20:05:26,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:05:39] 2024-05-19 20:05:26,317 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 13:05:39] 2024-05-19 20:05:26,318 | INFO     | aborting loop
[2024-05-19 13:05:39] 2024-05-19 20:05:26,318 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 13:05:39] 2024-05-19 20:05:26,319 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 13:05:39] 2024-05-19 20:05:26,319 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 13:05:39] 2024-05-19 20:05:26,336 | INFO     | all data control threads have been joined
[2024-05-19 13:05:39] 2024-05-19 20:05:27,320 | INFO     | [job] retrieve thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:27,324 | INFO     | [job] job monitor thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:27,329 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:27,342 | INFO     | [data] control thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:27,677 | INFO     | [payload] failed_post thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:27,678 | INFO     | all payload control threads have been joined
[2024-05-19 13:05:39] 2024-05-19 20:05:27,709 | INFO     | [job] validate thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:27,856 | INFO     | all job control threads have been joined
[2024-05-19 13:05:39] 2024-05-19 20:05:28,191 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:28,247 | INFO     | [payload] validate_post thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:28,267 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 13:05:39] 2024-05-19 20:05:28,323 | INFO     | [data] copytool_out thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:28,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 13:05:39] 2024-05-19 20:05:28,577 | INFO     | [data] copytool_in thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:28,680 | INFO     | [payload] control thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:28,696 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:28,750 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:28,861 | INFO     | [job] control thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:29,486 | INFO     | [job] queue monitor thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:32,275 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 13:05:39] 2024-05-19 20:05:33,818 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697930979136)>', '<ExcThread(monitor, started 139697726650112)>']
[2024-05-19 13:05:39] 2024-05-19 20:05:34,358 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 13:05:39] 2024-05-19 20:05:34,359 | INFO     | [monitor] control thread has ended
[2024-05-19 13:05:39] 2024-05-19 20:05:38,841 | INFO     | all workflow threads have been joined
[2024-05-19 13:05:39] 2024-05-19 20:05:38,842 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 13:05:39] 2024-05-19 20:05:38,842 | INFO     | traces error code: 0
[2024-05-19 13:05:39] 2024-05-19 20:05:38,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 13:05:39] 2024-05-19 20:05:38,970 [wrapper] ==== pilot stdout END ====
[2024-05-19 13:05:39] 2024-05-19 20:05:38,973 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 13:05:39] 2024-05-19 20:05:38,976 [wrapper] pilotpid: 203569
[2024-05-19 13:05:39] 2024-05-19 20:05:38,979 [wrapper] Pilot exit status: 0
[2024-05-19 13:05:39] 2024-05-19 20:05:38,990 [wrapper] pandaids: 6209149085
[2024-05-19 13:05:39] 2024-05-19 20:05:39,056 [wrapper] cleanup: SIGTERM to supervisor_pilot 274937 203570
[2024-05-19 13:05:39] 2024-05-19 20:05:39,058 [wrapper] Test setup, not cleaning
[2024-05-19 13:05:39] 2024-05-19 20:05:39,060 [wrapper] ==== wrapper stdout END ====
[2024-05-19 13:05:39] 2024-05-19 20:05:39,063 [wrapper] ==== wrapper stderr END ====
[2024-05-19 13:05:39] 2024-05-19 20:05:39,067 [wrapper] apfmon messages muted
[2024-05-19 13:05:39]  *** Error codes and diagnostics ***
[2024-05-19 13:05:39]     "exeErrorCode": 0,
[2024-05-19 13:05:39]     "exeErrorDiag": "",
[2024-05-19 13:05:39]     "pilotErrorCode": 0,
[2024-05-19 13:05:39]     "pilotErrorDiag": "",
[2024-05-19 13:05:39]  *** Listing of results directory ***
[2024-05-19 13:05:39] total 828140
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc    467845 May 18 10:52 pilot3.tar.gz
[2024-05-19 13:05:39] -rwx------ 1 boinc boinc     32251 May 18 11:02 runpilot2-wrapper.sh
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc      5633 May 18 11:02 queuedata.json
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc       100 May 19 09:03 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 13:05:39] -rwxr-xr-x 1 boinc boinc      7986 May 19 09:03 run_atlas
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc       105 May 19 09:03 job.xml
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc      6624 May 19 09:03 init_data.xml
[2024-05-19 13:05:39] -rw-r--r-- 2 boinc boinc 598797119 May 19 09:03 EVNT.38776119._000520.pool.root.1
[2024-05-19 13:05:39] -rw-r--r-- 2 boinc boinc     17537 May 19 09:03 start_atlas.sh
[2024-05-19 13:05:39] drwxrwx--x 2 boinc boinc      4096 May 19 09:03 shared
[2024-05-19 13:05:39] -rw-r--r-- 2 boinc boinc    480004 May 19 09:03 input.tar.gz
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc         0 May 19 09:03 boinc_lockfile
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc      2635 May 19 09:03 pandaJob.out
[2024-05-19 13:05:39] -rw------- 1 boinc boinc       424 May 19 09:03 setup.sh.local
[2024-05-19 13:05:39] -rw------- 1 boinc boinc   1014053 May 19 09:03 agis_schedconf.cvmfs.json
[2024-05-19 13:05:39] -rw------- 1 boinc boinc   1324701 May 19 09:03 cric_ddmendpoints.json
[2024-05-19 13:05:39] drwx------ 4 boinc boinc      4096 May 19 09:03 pilot3
[2024-05-19 13:05:39] -rw------- 1 boinc boinc 242533594 May 19 13:04 HITS.38776125._017781.pool.root.1
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc       532 May 19 13:04 boinc_task_state.xml
[2024-05-19 13:05:39] -rw------- 1 boinc boinc        95 May 19 13:05 pilot_heartbeat.json
[2024-05-19 13:05:39] -rw------- 1 boinc boinc      1059 May 19 13:05 memory_monitor_summary.json
[2024-05-19 13:05:39] -rw------- 1 boinc boinc         0 May 19 13:05 agis_ddmendpoints.agis.ALL.json
[2024-05-19 13:05:39] -rw------- 1 boinc boinc    434090 May 19 13:05 log.38776125._017781.job.log.tgz.1
[2024-05-19 13:05:39] -rw------- 1 boinc boinc      7786 May 19 13:05 heartbeat.json
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc      8192 May 19 13:05 boinc_mmap_file
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc        27 May 19 13:05 wrapper_checkpoint.txt
[2024-05-19 13:05:39] -rw------- 1 boinc boinc      4333 May 19 13:05 pilotlog.txt
[2024-05-19 13:05:39] -rw------- 1 boinc boinc   1144622 May 19 13:05 log.38776125._017781.job.log.1
[2024-05-19 13:05:39] -rw------- 1 boinc boinc       357 May 19 13:05 output.list
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc       620 May 19 13:05 runtime_log
[2024-05-19 13:05:39] -rw------- 1 boinc boinc   1597440 May 19 13:05 result.tar.gz
[2024-05-19 13:05:39] -rw------- 1 boinc boinc       657 May 19 13:05 YA3NDmtYdS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmWxSKDmMGSyWm.diag
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc     11287 May 19 13:05 runtime_log.err
[2024-05-19 13:05:39] -rw-r--r-- 1 boinc boinc     21928 May 19 13:05 stderr.txt
[2024-05-19 13:05:39] HITS file was successfully produced:
[2024-05-19 13:05:39] -rw------- 1 boinc boinc 242533594 May 19 13:04 shared/HITS.pool.root.1
[2024-05-19 13:05:39]  *** Contents of shared directory: ***
[2024-05-19 13:05:39] total 823676
[2024-05-19 13:05:39] -rw-r--r-- 2 boinc boinc 598797119 May 19 09:03 ATLAS.root_0
[2024-05-19 13:05:39] -rw-r--r-- 2 boinc boinc     17537 May 19 09:03 start_atlas.sh
[2024-05-19 13:05:39] -rw-r--r-- 2 boinc boinc    480004 May 19 09:03 input.tar.gz
[2024-05-19 13:05:39] -rw------- 1 boinc boinc 242533594 May 19 13:04 HITS.pool.root.1
[2024-05-19 13:05:39] -rw------- 1 boinc boinc   1597440 May 19 13:05 result.tar.gz
13:05:41 (199418): run_atlas exited; CPU time 33249.078026
13:05:41 (199418): called boinc_finish(0)

</stderr_txt>
]]>

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