Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
21:43:21 (175628): wrapper (7.7.26015): starting
21:43:21 (175628): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 21:43:21] Arguments: --nthreads 12
[2024-05-18 21:43:21] Threads: 12
[2024-05-18 21:43:21] Checking for CVMFS
[2024-05-18 21:43:21] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 21:43:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 21:43:21] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 21:43:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 21:43:22] 2.9.2.0 9154 185894 121880 132901 0 247 25723169 45568000 17175 130560 0 1188362038 99.803 667496425 3759 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 21:43:22] CVMFS is ok
[2024-05-18 21:43:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 21:43:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 21:43:22] Further information can be found at the LHC@home message board.
[2024-05-18 21:43:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 21:43:22] Checking for apptainer binary...
[2024-05-18 21:43:22] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 21:43:22] Running /usr/bin/apptainer --version
[2024-05-18 21:43:22] apptainer version 1.1.8-1.el7
[2024-05-18 21:43:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 21:43:23] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0053.triumf.lcg
[2024-05-18 21:43:23] apptainer works
[2024-05-18 21:43:23] Set ATHENA_PROC_NUMBER=12
[2024-05-18 21:43:23] Set ATHENA_CORE_NUMBER=12
[2024-05-18 21:43:23] Starting ATLAS job with PandaID=6209148691
[2024-05-18 21:43:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 23:21:04]  *** The last 200 lines of the pilot log: ***
[2024-05-18 23:21:04]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-18 23:21:04]  direct_access_lan=False
[2024-05-18 23:21:04]  direct_access_wan=False
[2024-05-18 23:21:04]  domain=
[2024-05-18 23:21:04]  filesize=365728
[2024-05-18 23:21:04]  filetype=log
[2024-05-18 23:21:04]  guid=0295e278-19a0-40d3-a7d6-327122404f08
[2024-05-18 23:21:04]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 23:21:04]  is_tar=False
[2024-05-18 23:21:04]  lfn=log.38776125._017453.job.log.tgz.1
[2024-05-18 23:21:04]  mtime=0
[2024-05-18 23:21:04]  protocol_id=None
[2024-05-18 23:21:04]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 23:21:04]  replicas=None
[2024-05-18 23:21:04]  scope=mc23_13p6TeV
[2024-05-18 23:21:04]  status=None
[2024-05-18 23:21:04]  status_code=0
[2024-05-18 23:21:04]  storage_token=
[2024-05-18 23:21:04]  surl=/home/boinc/slots/0/PanDA_Pilot-6209148691/log.38776125._017453.job.log.tgz.1
[2024-05-18 23:21:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/f2/log.38776125._017453.job.log.tgz.1
[2024-05-18 23:21:04]  workdir=None
[2024-05-18 23:21:04] ]
[2024-05-18 23:21:04] 2024-05-19 06:20:38,443 | INFO     | transferring file log.38776125._017453.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209148691/log.38776125._017453.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 23:21:04] 2024-05-19 06:20:38,443 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209148691/log.38776125._017453.job.log.tgz.1 /home/boinc/slots/0/log.38776125._017453.job.log.t
[2024-05-18 23:21:04] 2024-05-19 06:20:38,478 | INFO     | adding to output.list: log.38776125._017453.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ba/f2/log.38776125._017453.job.log.tg
[2024-05-18 23:21:04] 2024-05-19 06:20:38,479 | INFO     | summary of transferred files:
[2024-05-18 23:21:04] 2024-05-19 06:20:38,479 | INFO     |  -- lfn=log.38776125._017453.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 23:21:04] 2024-05-19 06:20:38,479 | INFO     | stage-out finished correctly
[2024-05-18 23:21:04] 2024-05-19 06:20:39,096 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 23:21:04] 2024-05-19 06:20:39,148 | INFO     | job 6209148691 has state=finished
[2024-05-18 23:21:04] 2024-05-19 06:20:39,148 | INFO     | preparing for final server update for job 6209148691 in state='finished'
[2024-05-18 23:21:04] 2024-05-19 06:20:39,148 | INFO     | this job has now completed (state=finished)
[2024-05-18 23:21:04] 2024-05-19 06:20:39,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 23:21:04] 2024-05-19 06:20:39,149 | INFO     | job 6209148691 has finished - writing final server update
[2024-05-18 23:21:04] 2024-05-19 06:20:39,149 | INFO     | total number of processed events: 400 (read)
[2024-05-18 23:21:04] 2024-05-19 06:20:39,151 | INFO     | executing command: lscpu
[2024-05-18 23:21:04] 2024-05-19 06:20:39,197 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 23:21:04] 2024-05-19 06:20:39,197 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 23:21:04] 2024-05-19 06:20:39,251 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 23:21:04] 2024-05-19 06:20:47,543 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 23:21:04] 2024-05-19 06:20:47,543 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209148691/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 23:21:04] 2024-05-19 06:20:47,544 | INFO     | extracted standard info from prmon json
[2024-05-18 23:21:04] 2024-05-19 06:20:47,544 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 23:21:04] 2024-05-19 06:20:47,544 | WARNING  | GPU info not found in prmon json
[2024-05-18 23:21:04] 2024-05-19 06:20:47,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 23:21:04] 2024-05-19 06:20:47,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 23:21:04] 2024-05-19 06:20:47,546 | INFO     | fitting pss+swap vs Time
[2024-05-18 23:21:04] 2024-05-19 06:20:47,546 | INFO     | model: linear, x: [1716094161.0, 1716094222.0, 1716094283.0, 1716094344.0, 1716094405.0, 1716094466.0, 1716094527.0, 1716094588.0, 1716094649.0, 1716094710.0, 1716
[2024-05-18 23:21:04] 2024-05-19 06:20:47,546 | INFO     | sum of square deviations: 211333621.44318137
[2024-05-18 23:21:04] 2024-05-19 06:20:47,547 | INFO     | sum of deviations: 23232044636.454556
[2024-05-18 23:21:04] 2024-05-19 06:20:47,547 | INFO     | mean x: 1716096814.6704545
[2024-05-18 23:21:04] 2024-05-19 06:20:47,547 | INFO     | mean y: 2679439.6363636362
[2024-05-18 23:21:04] 2024-05-19 06:20:47,547 | INFO     | -- intersect: -188648977247.2785
[2024-05-18 23:21:04] 2024-05-19 06:20:47,547 | INFO     | intersect: -188648977247.2785
[2024-05-18 23:21:04] 2024-05-19 06:20:47,547 | INFO     | chi2: 2.4010698284703627
[2024-05-18 23:21:04] 2024-05-19 06:20:47,547 | INFO     | -- intersect: -188648977247.2785
[2024-05-18 23:21:04] 2024-05-19 06:20:47,547 | INFO     | current memory leak: 109.93 B/s (using 88 data points, chi2=2.40)
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | ..............................
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | . Timing measurements:
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | . get job = 0 s
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | . initial setup = 2 s
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | . payload setup = 8 s
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | . stage-in = 0 s
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | . payload execution = 5787 s
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | . stage-out = 0 s
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | . log creation = 0 s
[2024-05-18 23:21:04] 2024-05-19 06:20:47,548 | INFO     | ..............................
[2024-05-18 23:21:04] 2024-05-19 06:20:47,767 | WARNING  | process 190573 is no longer using CPU - aborting
[2024-05-18 23:21:04] 2024-05-19 06:20:47,767 | INFO     | aborting job monitoring since job object (job id=6209148691) has expired
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | 
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | job summary report
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | --------------------------------------------------
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | PanDA job id: 6209148691
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | task id: 38776125
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | errors: (none)
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | pilot state: finished 
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | transexitcode: 0
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | exeerrorcode: 0
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | exeerrordiag: 
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | exitcode: 0
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | exitmsg: OK
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | cpuconsumptiontime: 34188 s
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | nevents: 400
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | neventsw: 0
[2024-05-18 23:21:04] 2024-05-19 06:20:48,128 | INFO     | pid: 190573
[2024-05-18 23:21:04] 2024-05-19 06:20:48,129 | INFO     | pgrp: 190573
[2024-05-18 23:21:04] 2024-05-19 06:20:48,129 | INFO     | corecount: 12
[2024-05-18 23:21:04] 2024-05-19 06:20:48,129 | INFO     | event service: False
[2024-05-18 23:21:04] 2024-05-19 06:20:48,129 | INFO     | sizes: {0: 2392196, 8: 2392402, 11: 2392430, 5799: 2418795, 5800: 2418794, 5801: 2427804, 5802: 2427988, 5810: 2428158}
[2024-05-18 23:21:04] 2024-05-19 06:20:48,129 | INFO     | --------------------------------------------------
[2024-05-18 23:21:04] 2024-05-19 06:20:48,129 | INFO     | 
[2024-05-18 23:21:04] 2024-05-19 06:20:48,129 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 23:21:04] 2024-05-19 06:20:48,164 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,164 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,164 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,164 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | job 6209148691 has completed (purged errors)
[2024-05-18 23:21:04] 2024-05-19 06:20:48,165 | INFO     | overall cleanup function is called
[2024-05-18 23:21:04] 2024-05-19 06:20:49,173 | INFO     | --- collectZombieJob: --- 10, [190573]
[2024-05-18 23:21:04] 2024-05-19 06:20:49,173 | INFO     | zombie collector waiting for pid 190573
[2024-05-18 23:21:04] 2024-05-19 06:20:49,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 23:21:04] 2024-05-19 06:20:50,178 | INFO     | collected zombie processes
[2024-05-18 23:21:04] 2024-05-19 06:20:50,178 | INFO     | will now attempt to kill all subprocesses of pid=190573
[2024-05-18 23:21:04] 2024-05-19 06:20:50,354 | INFO     | process IDs to be killed: [190573] (in reverse order)
[2024-05-18 23:21:04] 2024-05-19 06:20:50,518 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 23:21:04] 2024-05-19 06:20:50,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 23:21:04] 2024-05-19 06:20:50,526 | INFO     | did not find any defunct processes belonging to 190573
[2024-05-18 23:21:04] 2024-05-19 06:20:50,533 | INFO     | did not find any defunct processes belonging to 190573
[2024-05-18 23:21:04] 2024-05-19 06:20:50,533 | INFO     | ready for new job
[2024-05-18 23:21:04] 2024-05-19 06:20:50,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 23:21:04] 2024-05-19 06:20:50,535 | INFO     | *************************************
[2024-05-18 23:21:04] 2024-05-19 06:20:50,535 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 23:21:04] 2024-05-19 06:20:50,535 | INFO     | *************************************
[2024-05-18 23:21:04] 2024-05-19 06:20:50,535 | INFO     | 
[2024-05-18 23:21:04] 2024-05-19 06:20:50,537 | INFO     | architecture information:
[2024-05-18 23:21:04] 2024-05-19 06:20:50,537 | INFO     | executing command: cat /etc/os-release
[2024-05-18 23:21:04] 2024-05-19 06:20:50,562 | INFO     | cat /etc/os-release:
[2024-05-18 23:21:04] NAME="CentOS Linux"
[2024-05-18 23:21:04] VERSION="7 (Core)"
[2024-05-18 23:21:04] ID="centos"
[2024-05-18 23:21:04] ID_LIKE="rhel fedora"
[2024-05-18 23:21:04] VERSION_ID="7"
[2024-05-18 23:21:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 23:21:04] ANSI_COLOR="0;31"
[2024-05-18 23:21:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 23:21:04] HOME_URL="https://www.centos.org/"
[2024-05-18 23:21:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 23:21:04] 
[2024-05-18 23:21:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 23:21:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 23:21:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 23:21:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 23:21:04] 
[2024-05-18 23:21:04] 2024-05-19 06:20:50,563 | INFO     | *************************************
[2024-05-18 23:21:04] 2024-05-19 06:20:51,064 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 23:21:04] 2024-05-19 06:20:51,113 | INFO     | sufficient remaining disk space (1739569758208 B)
[2024-05-18 23:21:04] 2024-05-19 06:20:51,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 23:21:04] 2024-05-19 06:20:51,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 23:21:04] 2024-05-19 06:20:51,114 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 23:21:04] 2024-05-19 06:20:51,115 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 23:21:04] 2024-05-19 06:20:51,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 23:21:04] 2024-05-19 06:20:51,115 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 23:21:04] 2024-05-19 06:20:51,270 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:21:04] 2024-05-19 06:20:51,270 | INFO     | aborting loop
[2024-05-18 23:21:04] 2024-05-19 06:20:51,514 | INFO     | all data control threads have been joined
[2024-05-18 23:21:04] 2024-05-19 06:20:51,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 23:21:04] 2024-05-19 06:20:52,119 | INFO     | [job] retrieve thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:52,273 | INFO     | [job] job monitor thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:52,383 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:52,415 | INFO     | all payload control threads have been joined
[2024-05-18 23:21:04] 2024-05-19 06:20:52,465 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:52,518 | INFO     | all job control threads have been joined
[2024-05-18 23:21:04] 2024-05-19 06:20:52,519 | INFO     | [data] control thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:52,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:21:04] 2024-05-19 06:20:52,852 | INFO     | [payload] validate_post thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:52,875 | INFO     | [payload] failed_post thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:52,940 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:53,085 | INFO     | [job] validate thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:53,148 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:53,218 | INFO     | [data] copytool_in thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:53,420 | INFO     | [payload] control thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:53,523 | INFO     | [job] control thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:53,583 | INFO     | [data] copytool_out thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:53,657 | INFO     | [job] queue monitor thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:54,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 23:21:04] 2024-05-19 06:20:58,166 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 23:21:04] 2024-05-19 06:20:58,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139995292346176)>', '<ExcThread(monitor, started 139995079624448)>']
[2024-05-18 23:21:04] 2024-05-19 06:20:59,140 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 23:21:04] 2024-05-19 06:20:59,141 | INFO     | [monitor] control thread has ended
[2024-05-18 23:21:04] 2024-05-19 06:21:03,452 | INFO     | all workflow threads have been joined
[2024-05-18 23:21:04] 2024-05-19 06:21:03,452 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 23:21:04] 2024-05-19 06:21:03,452 | INFO     | traces error code: 0
[2024-05-18 23:21:04] 2024-05-19 06:21:03,458 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 23:21:04] 2024-05-19 06:21:03,575 [wrapper] ==== pilot stdout END ====
[2024-05-18 23:21:04] 2024-05-19 06:21:03,590 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 23:21:04] 2024-05-19 06:21:03,599 [wrapper] pilotpid: 181902
[2024-05-18 23:21:04] 2024-05-19 06:21:03,607 [wrapper] Pilot exit status: 0
[2024-05-18 23:21:04] 2024-05-19 06:21:03,695 [wrapper] pandaids: 6209148691
[2024-05-18 23:21:04] 2024-05-19 06:21:03,833 [wrapper] cleanup: SIGTERM to supervisor_pilot  10639 181903
[2024-05-18 23:21:04] 2024-05-19 06:21:03,842 [wrapper] Test setup, not cleaning
[2024-05-18 23:21:04] 2024-05-19 06:21:03,850 [wrapper] ==== wrapper stdout END ====
[2024-05-18 23:21:04] 2024-05-19 06:21:03,858 [wrapper] ==== wrapper stderr END ====
[2024-05-18 23:21:04] 2024-05-19 06:21:03,875 [wrapper] apfmon messages muted
[2024-05-18 23:21:04]  *** Error codes and diagnostics ***
[2024-05-18 23:21:04]     "exeErrorCode": 0,
[2024-05-18 23:21:04]     "exeErrorDiag": "",
[2024-05-18 23:21:04]     "pilotErrorCode": 0,
[2024-05-18 23:21:04]     "pilotErrorDiag": "",
[2024-05-18 23:21:04]  *** Listing of results directory ***
[2024-05-18 23:21:04] total 838044
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc    467845 May 18 10:24 pilot3.tar.gz
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc      5633 May 18 10:24 queuedata.json
[2024-05-18 23:21:04] -rwx------ 1 boinc boinc     32251 May 18 10:24 runpilot2-wrapper.sh
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc       100 May 18 21:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 23:21:04] -rwxr-xr-x 1 boinc boinc      7986 May 18 21:43 run_atlas
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc       105 May 18 21:43 job.xml
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc      6626 May 18 21:43 init_data.xml
[2024-05-18 23:21:04] -rw-r--r-- 2 boinc boinc 599597840 May 18 21:43 EVNT.38776119._000502.pool.root.1
[2024-05-18 23:21:04] -rw-r--r-- 2 boinc boinc     17537 May 18 21:43 start_atlas.sh
[2024-05-18 23:21:04] drwxrwx--x 2 boinc boinc      4096 May 18 21:43 shared
[2024-05-18 23:21:04] -rw-r--r-- 2 boinc boinc    480005 May 18 21:43 input.tar.gz
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc         0 May 18 21:43 boinc_lockfile
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc      2636 May 18 21:43 pandaJob.out
[2024-05-18 23:21:04] -rw------- 1 boinc boinc       424 May 18 21:43 setup.sh.local
[2024-05-18 23:21:04] -rw------- 1 boinc boinc   1013987 May 18 21:43 agis_schedconf.cvmfs.json
[2024-05-18 23:21:04] -rw------- 1 boinc boinc         0 May 18 21:43 agis_ddmendpoints.agis.ALL.json
[2024-05-18 23:21:04] -rw------- 1 boinc boinc   1324701 May 18 21:43 cric_ddmendpoints.json
[2024-05-18 23:21:04] drwx------ 4 boinc boinc      4096 May 18 21:43 pilot3
[2024-05-18 23:21:04] -rw------- 1 boinc boinc 253344276 May 18 23:20 HITS.38776125._017453.pool.root.1
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc       531 May 18 23:20 boinc_task_state.xml
[2024-05-18 23:21:04] -rw------- 1 boinc boinc        95 May 18 23:20 pilot_heartbeat.json
[2024-05-18 23:21:04] -rw------- 1 boinc boinc      1065 May 18 23:20 memory_monitor_summary.json
[2024-05-18 23:21:04] -rw------- 1 boinc boinc    365728 May 18 23:20 log.38776125._017453.job.log.tgz.1
[2024-05-18 23:21:04] -rw------- 1 boinc boinc      7790 May 18 23:20 heartbeat.json
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc      8192 May 18 23:20 boinc_mmap_file
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc        27 May 18 23:20 wrapper_checkpoint.txt
[2024-05-18 23:21:04] -rw------- 1 boinc boinc      4333 May 18 23:21 pilotlog.txt
[2024-05-18 23:21:04] -rw------- 1 boinc boinc    476992 May 18 23:21 log.38776125._017453.job.log.1
[2024-05-18 23:21:04] -rw------- 1 boinc boinc       357 May 18 23:21 output.list
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc       620 May 18 23:21 runtime_log
[2024-05-18 23:21:04] -rw------- 1 boinc boinc    860160 May 18 23:21 result.tar.gz
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc     11286 May 18 23:21 runtime_log.err
[2024-05-18 23:21:04] -rw------- 1 boinc boinc       658 May 18 23:21 EG8KDmsycS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm2uSKDm0SXnSo.diag
[2024-05-18 23:21:04] -rw-r--r-- 1 boinc boinc     21331 May 18 23:21 stderr.txt
[2024-05-18 23:21:04] HITS file was successfully produced:
[2024-05-18 23:21:04] -rw------- 1 boinc boinc 253344276 May 18 23:20 shared/HITS.pool.root.1
[2024-05-18 23:21:04]  *** Contents of shared directory: ***
[2024-05-18 23:21:04] total 834296
[2024-05-18 23:21:04] -rw-r--r-- 2 boinc boinc 599597840 May 18 21:43 ATLAS.root_0
[2024-05-18 23:21:04] -rw-r--r-- 2 boinc boinc     17537 May 18 21:43 start_atlas.sh
[2024-05-18 23:21:04] -rw-r--r-- 2 boinc boinc    480005 May 18 21:43 input.tar.gz
[2024-05-18 23:21:04] -rw------- 1 boinc boinc 253344276 May 18 23:20 HITS.pool.root.1
[2024-05-18 23:21:04] -rw------- 1 boinc boinc    860160 May 18 23:21 result.tar.gz
23:21:06 (175628): run_atlas exited; CPU time 33841.016365
23:21:06 (175628): called boinc_finish(0)

</stderr_txt>
]]>

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