Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
22:23:25 (26239): wrapper (7.7.26015): starting
22:23:25 (26239): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 22:23:25] Arguments: --nthreads 12
[2024-05-18 22:23:25] Threads: 12
[2024-05-18 22:23:25] Checking for CVMFS
[2024-05-18 22:23:26] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 22:23:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 22:23:26] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 22:23:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 22:23:26] 2.10.1.0 2884 174674 159592 132902 2 144 36970112 45568000 11806 130560 0 1007455835 99.774 609423193 18391 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 22:23:26] CVMFS is ok
[2024-05-18 22:23:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 22:23:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 22:23:26] Further information can be found at the LHC@home message board.
[2024-05-18 22:23:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 22:23:26] Checking for apptainer binary...
[2024-05-18 22:23:26] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 22:23:26] Running /usr/bin/apptainer --version
[2024-05-18 22:23:26] apptainer version 1.1.8-1.el7
[2024-05-18 22:23:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 22:23:28] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0154.triumf.lcg
[2024-05-18 22:23:28] apptainer works
[2024-05-18 22:23:28] Set ATHENA_PROC_NUMBER=12
[2024-05-18 22:23:28] Set ATHENA_CORE_NUMBER=12
[2024-05-18 22:23:28] Starting ATLAS job with PandaID=6209127383
[2024-05-18 22:23:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 23:37:28]  *** The last 200 lines of the pilot log: ***
[2024-05-18 23:37:28]  lfn=log.38776125._017331.job.log.tgz.1
[2024-05-18 23:37:28]  mtime=0
[2024-05-18 23:37:28]  protocol_id=None
[2024-05-18 23:37:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 23:37:28]  replicas=None
[2024-05-18 23:37:28]  scope=mc23_13p6TeV
[2024-05-18 23:37:28]  status=None
[2024-05-18 23:37:28]  status_code=0
[2024-05-18 23:37:28]  storage_token=
[2024-05-18 23:37:28]  surl=/home/boinc/slots/0/PanDA_Pilot-6209127383/log.38776125._017331.job.log.tgz.1
[2024-05-18 23:37:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/d3/log.38776125._017331.job.log.tgz.1
[2024-05-18 23:37:28]  workdir=None
[2024-05-18 23:37:28] ]
[2024-05-18 23:37:28] 2024-05-19 06:36:56,597 | INFO     | transferring file log.38776125._017331.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209127383/log.38776125._017331.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 23:37:28] 2024-05-19 06:36:56,598 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209127383/log.38776125._017331.job.log.tgz.1 /home/boinc/slots/0/log.38776125._017331.job.log.t
[2024-05-18 23:37:28] 2024-05-19 06:36:56,627 | INFO     | adding to output.list: log.38776125._017331.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e2/d3/log.38776125._017331.job.log.tg
[2024-05-18 23:37:28] 2024-05-19 06:36:56,628 | INFO     | summary of transferred files:
[2024-05-18 23:37:28] 2024-05-19 06:36:56,628 | INFO     |  -- lfn=log.38776125._017331.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 23:37:28] 2024-05-19 06:36:56,628 | INFO     | stage-out finished correctly
[2024-05-18 23:37:28] 2024-05-19 06:36:57,672 | WARNING  | process 37302 is no longer using CPU - aborting
[2024-05-18 23:37:28] 2024-05-19 06:36:57,673 | INFO     | will not send any job update
[2024-05-18 23:37:28] 2024-05-19 06:36:59,400 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 23:37:28] 2024-05-19 06:37:00,177 | INFO     | monitor loop #345: job 0:6209127383 is in state 'finished'
[2024-05-18 23:37:28] 2024-05-19 06:37:00,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 23:37:28] 2024-05-19 06:37:02,233 | INFO     | job 6209127383 has state=finished
[2024-05-18 23:37:28] 2024-05-19 06:37:02,234 | INFO     | preparing for final server update for job 6209127383 in state='finished'
[2024-05-18 23:37:28] 2024-05-19 06:37:02,234 | INFO     | this job has now completed (state=finished)
[2024-05-18 23:37:28] 2024-05-19 06:37:02,235 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 23:37:28] 2024-05-19 06:37:02,235 | INFO     | job 6209127383 has finished - writing final server update
[2024-05-18 23:37:28] 2024-05-19 06:37:02,235 | INFO     | total number of processed events: 400 (read)
[2024-05-18 23:37:28] 2024-05-19 06:37:02,242 | INFO     | executing command: lscpu
[2024-05-18 23:37:28] 2024-05-19 06:37:02,295 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 23:37:28] 2024-05-19 06:37:02,296 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 23:37:28] 2024-05-19 06:37:02,358 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 23:37:28] 2024-05-19 06:37:02,681 | INFO     | monitor loop #346: job 0:6209127383 is in state 'finished'
[2024-05-18 23:37:28] 2024-05-19 06:37:02,681 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 23:37:28] 2024-05-19 06:37:05,184 | INFO     | monitor loop #347: job 0:6209127383 is in state 'finished'
[2024-05-18 23:37:28] 2024-05-19 06:37:05,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 23:37:28] 2024-05-19 06:37:07,687 | INFO     | monitor loop #348: job 0:6209127383 is in state 'finished'
[2024-05-18 23:37:28] 2024-05-19 06:37:07,687 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 23:37:28] 2024-05-19 06:37:07,793 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 23:37:28] 2024-05-19 06:37:07,793 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209127383/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 23:37:28] 2024-05-19 06:37:07,794 | INFO     | extracted standard info from prmon json
[2024-05-18 23:37:28] 2024-05-19 06:37:07,794 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 23:37:28] 2024-05-19 06:37:07,794 | WARNING  | GPU info not found in prmon json
[2024-05-18 23:37:28] 2024-05-19 06:37:07,795 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 23:37:28] 2024-05-19 06:37:07,795 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 23:37:28] 2024-05-19 06:37:07,797 | INFO     | fitting pss+swap vs Time
[2024-05-18 23:37:28] 2024-05-19 06:37:07,797 | INFO     | model: linear, x: [1716096557.0, 1716096618.0, 1716096679.0, 1716096740.0, 1716096801.0, 1716096862.0, 1716096923.0, 1716096984.0, 1716097045.0, 1716097106.0, 1716
[2024-05-18 23:37:28] 2024-05-19 06:37:07,797 | INFO     | sum of square deviations: 85136480.0
[2024-05-18 23:37:28] 2024-05-19 06:37:07,798 | INFO     | sum of deviations: 17813926136.0
[2024-05-18 23:37:28] 2024-05-19 06:37:07,798 | INFO     | mean x: 1716098509.0
[2024-05-18 23:37:28] 2024-05-19 06:37:07,798 | INFO     | mean y: 2687835.0923076924
[2024-05-18 23:37:28] 2024-05-19 06:37:07,798 | INFO     | -- intersect: -359073140545.7115
[2024-05-18 23:37:28] 2024-05-19 06:37:07,798 | INFO     | intersect: -359073140545.7115
[2024-05-18 23:37:28] 2024-05-19 06:37:07,798 | INFO     | chi2: 2.4790701079250663
[2024-05-18 23:37:28] 2024-05-19 06:37:07,799 | INFO     | -- intersect: -359073140545.7115
[2024-05-18 23:37:28] 2024-05-19 06:37:07,799 | INFO     | current memory leak: 209.24 B/s (using 65 data points, chi2=2.48)
[2024-05-18 23:37:28] 2024-05-19 06:37:07,799 | INFO     | ..............................
[2024-05-18 23:37:28] 2024-05-19 06:37:07,799 | INFO     | . Timing measurements:
[2024-05-18 23:37:28] 2024-05-19 06:37:07,799 | INFO     | . get job = 0 s
[2024-05-18 23:37:28] 2024-05-19 06:37:07,799 | INFO     | . initial setup = 2 s
[2024-05-18 23:37:28] 2024-05-19 06:37:07,799 | INFO     | . payload setup = 8 s
[2024-05-18 23:37:28] 2024-05-19 06:37:07,800 | INFO     | . stage-in = 0 s
[2024-05-18 23:37:28] 2024-05-19 06:37:07,800 | INFO     | . payload execution = 4364 s
[2024-05-18 23:37:28] 2024-05-19 06:37:07,800 | INFO     | . stage-out = 0 s
[2024-05-18 23:37:28] 2024-05-19 06:37:07,800 | INFO     | . log creation = 0 s
[2024-05-18 23:37:28] 2024-05-19 06:37:07,800 | INFO     | ..............................
[2024-05-18 23:37:28] 2024-05-19 06:37:07,868 | INFO     | 
[2024-05-18 23:37:28] 2024-05-19 06:37:07,868 | INFO     | job summary report
[2024-05-18 23:37:28] 2024-05-19 06:37:07,869 | INFO     | --------------------------------------------------
[2024-05-18 23:37:28] 2024-05-19 06:37:07,869 | INFO     | PanDA job id: 6209127383
[2024-05-18 23:37:28] 2024-05-19 06:37:07,869 | INFO     | task id: 38776125
[2024-05-18 23:37:28] 2024-05-19 06:37:07,869 | INFO     | errors: (none)
[2024-05-18 23:37:28] 2024-05-19 06:37:07,869 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 23:37:28] 2024-05-19 06:37:07,869 | INFO     | pilot state: finished 
[2024-05-18 23:37:28] 2024-05-19 06:37:07,869 | INFO     | transexitcode: 0
[2024-05-18 23:37:28] 2024-05-19 06:37:07,870 | INFO     | exeerrorcode: 0
[2024-05-18 23:37:28] 2024-05-19 06:37:07,870 | INFO     | exeerrordiag: 
[2024-05-18 23:37:28] 2024-05-19 06:37:07,870 | INFO     | exitcode: 0
[2024-05-18 23:37:28] 2024-05-19 06:37:07,870 | INFO     | exitmsg: OK
[2024-05-18 23:37:28] 2024-05-19 06:37:07,870 | INFO     | cpuconsumptiontime: 40406 s
[2024-05-18 23:37:28] 2024-05-19 06:37:07,870 | INFO     | nevents: 400
[2024-05-18 23:37:28] 2024-05-19 06:37:07,870 | INFO     | neventsw: 0
[2024-05-18 23:37:28] 2024-05-19 06:37:07,870 | INFO     | pid: 37302
[2024-05-18 23:37:28] 2024-05-19 06:37:07,870 | INFO     | pgrp: 37302
[2024-05-18 23:37:28] 2024-05-19 06:37:07,871 | INFO     | corecount: 12
[2024-05-18 23:37:28] 2024-05-19 06:37:07,871 | INFO     | event service: False
[2024-05-18 23:37:28] 2024-05-19 06:37:07,871 | INFO     | sizes: {0: 2392145, 6: 2392351, 11: 2392379, 4377: 2418282, 4378: 2427236, 4381: 2427292, 4390: 2427590}
[2024-05-18 23:37:28] 2024-05-19 06:37:07,871 | INFO     | --------------------------------------------------
[2024-05-18 23:37:28] 2024-05-19 06:37:07,871 | INFO     | 
[2024-05-18 23:37:28] 2024-05-19 06:37:07,871 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 23:37:28] 2024-05-19 06:37:07,900 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,900 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,901 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,901 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,903 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,903 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 23:37:28] 2024-05-19 06:37:07,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,903 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 23:37:28] 2024-05-19 06:37:07,903 | INFO     | job 6209127383 has completed (purged errors)
[2024-05-18 23:37:28] 2024-05-19 06:37:07,903 | INFO     | overall cleanup function is called
[2024-05-18 23:37:28] 2024-05-19 06:37:08,912 | INFO     | --- collectZombieJob: --- 10, [37302]
[2024-05-18 23:37:28] 2024-05-19 06:37:08,912 | INFO     | zombie collector waiting for pid 37302
[2024-05-18 23:37:28] 2024-05-19 06:37:08,912 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 23:37:28] 2024-05-19 06:37:09,918 | INFO     | collected zombie processes
[2024-05-18 23:37:28] 2024-05-19 06:37:09,918 | INFO     | will now attempt to kill all subprocesses of pid=37302
[2024-05-18 23:37:28] 2024-05-19 06:37:10,068 | INFO     | process IDs to be killed: [37302] (in reverse order)
[2024-05-18 23:37:28] 2024-05-19 06:37:10,186 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 23:37:28] 2024-05-19 06:37:10,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 23:37:28] 2024-05-19 06:37:10,197 | INFO     | did not find any defunct processes belonging to 37302
[2024-05-18 23:37:28] 2024-05-19 06:37:10,203 | INFO     | did not find any defunct processes belonging to 37302
[2024-05-18 23:37:28] 2024-05-19 06:37:10,204 | INFO     | ready for new job
[2024-05-18 23:37:28] 2024-05-19 06:37:10,204 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 23:37:28] 2024-05-19 06:37:10,205 | INFO     | *************************************
[2024-05-18 23:37:28] 2024-05-19 06:37:10,205 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 23:37:28] 2024-05-19 06:37:10,205 | INFO     | *************************************
[2024-05-18 23:37:28] 2024-05-19 06:37:10,206 | INFO     | 
[2024-05-18 23:37:28] 2024-05-19 06:37:10,208 | INFO     | architecture information:
[2024-05-18 23:37:28] 2024-05-19 06:37:10,209 | INFO     | executing command: cat /etc/os-release
[2024-05-18 23:37:28] 2024-05-19 06:37:10,233 | INFO     | cat /etc/os-release:
[2024-05-18 23:37:28] NAME="CentOS Linux"
[2024-05-18 23:37:28] VERSION="7 (Core)"
[2024-05-18 23:37:28] ID="centos"
[2024-05-18 23:37:28] ID_LIKE="rhel fedora"
[2024-05-18 23:37:28] VERSION_ID="7"
[2024-05-18 23:37:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 23:37:28] ANSI_COLOR="0;31"
[2024-05-18 23:37:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 23:37:28] HOME_URL="https://www.centos.org/"
[2024-05-18 23:37:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 23:37:28] 
[2024-05-18 23:37:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 23:37:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 23:37:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 23:37:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 23:37:28] 
[2024-05-18 23:37:28] 2024-05-19 06:37:10,233 | INFO     | *************************************
[2024-05-18 23:37:28] 2024-05-19 06:37:10,737 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 23:37:28] 2024-05-19 06:37:10,764 | INFO     | sufficient remaining disk space (1895846379520 B)
[2024-05-18 23:37:28] 2024-05-19 06:37:10,765 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 23:37:28] 2024-05-19 06:37:10,765 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 23:37:28] 2024-05-19 06:37:10,765 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 23:37:28] 2024-05-19 06:37:10,766 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 23:37:28] 2024-05-19 06:37:10,767 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 23:37:28] 2024-05-19 06:37:10,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 23:37:28] 2024-05-19 06:37:10,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 23:37:28] 2024-05-19 06:37:11,194 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:37:28] 2024-05-19 06:37:11,194 | INFO     | aborting loop
[2024-05-18 23:37:28] 2024-05-19 06:37:11,210 | INFO     | all data control threads have been joined
[2024-05-18 23:37:28] 2024-05-19 06:37:11,470 | INFO     | all payload control threads have been joined
[2024-05-18 23:37:28] 2024-05-19 06:37:11,769 | INFO     | [job] retrieve thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:11,907 | INFO     | [job] validate thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:12,065 | INFO     | all job control threads have been joined
[2024-05-18 23:37:28] 2024-05-19 06:37:12,083 | INFO     | [payload] validate_post thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:12,200 | INFO     | [job] job monitor thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:12,211 | INFO     | [data] control thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:12,222 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 23:37:28] 2024-05-19 06:37:12,476 | INFO     | [payload] control thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:12,538 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:12,617 | INFO     | [payload] failed_post thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:12,788 | INFO     | [data] copytool_in thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:12,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:37:28] 2024-05-19 06:37:13,071 | INFO     | [job] control thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:13,085 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:13,229 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:13,880 | INFO     | [job] queue monitor thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:14,229 | INFO     | [data] copytool_out thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:14,772 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:21,109 | INFO     | job.realtimelogging is not enabled
[2024-05-18 23:37:28] 2024-05-19 06:37:22,114 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 23:37:28] 2024-05-19 06:37:22,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139962346575680)>', '<ExcThread(monitor, started 139962070574848)>']
[2024-05-18 23:37:28] 2024-05-19 06:37:22,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 23:37:28] 2024-05-19 06:37:22,821 | INFO     | [monitor] control thread has ended
[2024-05-18 23:37:28] 2024-05-19 06:37:27,842 | INFO     | all workflow threads have been joined
[2024-05-18 23:37:28] 2024-05-19 06:37:27,842 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 23:37:28] 2024-05-19 06:37:27,843 | INFO     | traces error code: 0
[2024-05-18 23:37:28] 2024-05-19 06:37:27,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 23:37:28] 2024-05-19 06:37:27,941 [wrapper] ==== pilot stdout END ====
[2024-05-18 23:37:28] 2024-05-19 06:37:27,946 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 23:37:28] 2024-05-19 06:37:27,950 [wrapper] pilotpid: 30616
[2024-05-18 23:37:28] 2024-05-19 06:37:27,954 [wrapper] Pilot exit status: 0
[2024-05-18 23:37:28] 2024-05-19 06:37:27,964 [wrapper] pandaids: 6209127383
[2024-05-18 23:37:28] 2024-05-19 06:37:28,042 [wrapper] cleanup: SIGTERM to supervisor_pilot 193646 30617
[2024-05-18 23:37:28] 2024-05-19 06:37:28,046 [wrapper] Test setup, not cleaning
[2024-05-18 23:37:28] 2024-05-19 06:37:28,050 [wrapper] ==== wrapper stdout END ====
[2024-05-18 23:37:28] 2024-05-19 06:37:28,054 [wrapper] ==== wrapper stderr END ====
[2024-05-18 23:37:28] 2024-05-19 06:37:28,061 [wrapper] apfmon messages muted
[2024-05-18 23:37:28]  *** Error codes and diagnostics ***
[2024-05-18 23:37:28]     "exeErrorCode": 0,
[2024-05-18 23:37:28]     "exeErrorDiag": "",
[2024-05-18 23:37:28]     "pilotErrorCode": 0,
[2024-05-18 23:37:28]     "pilotErrorDiag": "",
[2024-05-18 23:37:28]  *** Listing of results directory ***
[2024-05-18 23:37:28] total 828468
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc    467845 May 18 09:41 pilot3.tar.gz
[2024-05-18 23:37:28] -rwx------ 1 boinc boinc     32251 May 18 10:04 runpilot2-wrapper.sh
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc      5633 May 18 10:05 queuedata.json
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc       100 May 18 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 23:37:28] -rwxr-xr-x 1 boinc boinc      7986 May 18 22:23 run_atlas
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc       105 May 18 22:23 job.xml
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc      6622 May 18 22:23 init_data.xml
[2024-05-18 23:37:28] -rw-r--r-- 2 boinc boinc 597448135 May 18 22:23 EVNT.38776119._000491.pool.root.1
[2024-05-18 23:37:28] -rw-r--r-- 2 boinc boinc     17537 May 18 22:23 start_atlas.sh
[2024-05-18 23:37:28] drwxrwx--x 2 boinc boinc      4096 May 18 22:23 shared
[2024-05-18 23:37:28] -rw-r--r-- 2 boinc boinc    480012 May 18 22:23 input.tar.gz
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc         0 May 18 22:23 boinc_lockfile
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc      2635 May 18 22:23 pandaJob.out
[2024-05-18 23:37:28] -rw------- 1 boinc boinc       424 May 18 22:23 setup.sh.local
[2024-05-18 23:37:28] -rw------- 1 boinc boinc   1013987 May 18 22:23 agis_schedconf.cvmfs.json
[2024-05-18 23:37:28] -rw------- 1 boinc boinc         0 May 18 22:23 agis_ddmendpoints.agis.ALL.json
[2024-05-18 23:37:28] -rw------- 1 boinc boinc   1324701 May 18 22:23 cric_ddmendpoints.json
[2024-05-18 23:37:28] drwx------ 4 boinc boinc      4096 May 18 22:23 pilot3
[2024-05-18 23:37:28] -rw------- 1 boinc boinc 245769154 May 18 23:36 HITS.38776125._017331.pool.root.1
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc       530 May 18 23:36 boinc_task_state.xml
[2024-05-18 23:37:28] -rw------- 1 boinc boinc        95 May 18 23:36 pilot_heartbeat.json
[2024-05-18 23:37:28] -rw------- 1 boinc boinc      1056 May 18 23:36 memory_monitor_summary.json
[2024-05-18 23:37:28] -rw------- 1 boinc boinc    363802 May 18 23:36 log.38776125._017331.job.log.tgz.1
[2024-05-18 23:37:28] -rw------- 1 boinc boinc      7776 May 18 23:37 heartbeat.json
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc        27 May 18 23:37 wrapper_checkpoint.txt
[2024-05-18 23:37:28] -rw------- 1 boinc boinc      4405 May 18 23:37 pilotlog.txt
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc      8192 May 18 23:37 boinc_mmap_file
[2024-05-18 23:37:28] -rw------- 1 boinc boinc    438969 May 18 23:37 log.38776125._017331.job.log.1
[2024-05-18 23:37:28] -rw------- 1 boinc boinc       357 May 18 23:37 output.list
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc       620 May 18 23:37 runtime_log
[2024-05-18 23:37:28] -rw------- 1 boinc boinc    819200 May 18 23:37 result.tar.gz
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc     11286 May 18 23:37 runtime_log.err
[2024-05-18 23:37:28] -rw------- 1 boinc boinc       652 May 18 23:37 MrDODmYfcS5n7Olcko1bjSoqABFKDmABFKDmOtvXDm3JaKDmJcCrLm.diag
[2024-05-18 23:37:28] -rw-r--r-- 1 boinc boinc     21941 May 18 23:37 stderr.txt
[2024-05-18 23:37:28] HITS file was successfully produced:
[2024-05-18 23:37:28] -rw------- 1 boinc boinc 245769154 May 18 23:36 shared/HITS.pool.root.1
[2024-05-18 23:37:28]  *** Contents of shared directory: ***
[2024-05-18 23:37:28] total 824760
[2024-05-18 23:37:28] -rw-r--r-- 2 boinc boinc 597448135 May 18 22:23 ATLAS.root_0
[2024-05-18 23:37:28] -rw-r--r-- 2 boinc boinc     17537 May 18 22:23 start_atlas.sh
[2024-05-18 23:37:28] -rw-r--r-- 2 boinc boinc    480012 May 18 22:23 input.tar.gz
[2024-05-18 23:37:28] -rw------- 1 boinc boinc 245769154 May 18 23:36 HITS.pool.root.1
[2024-05-18 23:37:28] -rw------- 1 boinc boinc    819200 May 18 23:37 result.tar.gz
23:37:30 (26239): run_atlas exited; CPU time 40210.776744
23:37:30 (26239): called boinc_finish(0)

</stderr_txt>
]]>

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