Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
22:58:45 (217262): wrapper (7.7.26015): starting
22:58:45 (217262): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 22:58:45] Arguments: --nthreads 12
[2024-05-18 22:58:45] Threads: 12
[2024-05-18 22:58:45] Checking for CVMFS
[2024-05-18 22:58:45] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 22:58:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 22:58:45] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 22:58:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 22:58:45] 2.10.1.0 209053 185966 208852 132902 3 102 27024898 45568000 12555 130560 0 1097994193 99.767 655307519 17026 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 22:58:45] CVMFS is ok
[2024-05-18 22:58:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 22:58:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 22:58:45] Further information can be found at the LHC@home message board.
[2024-05-18 22:58:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 22:58:45] Checking for apptainer binary...
[2024-05-18 22:58:45] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 22:58:45] Running /usr/bin/apptainer --version
[2024-05-18 22:58:45] apptainer version 1.1.8-1.el7
[2024-05-18 22:58:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 22:58:46] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0110.triumf.lcg
[2024-05-18 22:58:46] apptainer works
[2024-05-18 22:58:46] Set ATHENA_PROC_NUMBER=12
[2024-05-18 22:58:46] Set ATHENA_CORE_NUMBER=12
[2024-05-18 22:58:47] Starting ATLAS job with PandaID=6209125716
[2024-05-18 22:58:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 00:11:06]  *** The last 200 lines of the pilot log: ***
[2024-05-19 00:11:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-19 00:11:06]  is_tar=False
[2024-05-19 00:11:06]  lfn=log.38776125._017104.job.log.tgz.1
[2024-05-19 00:11:06]  mtime=0
[2024-05-19 00:11:06]  protocol_id=None
[2024-05-19 00:11:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 00:11:06]  replicas=None
[2024-05-19 00:11:06]  scope=mc23_13p6TeV
[2024-05-19 00:11:06]  status=None
[2024-05-19 00:11:06]  status_code=0
[2024-05-19 00:11:06]  storage_token=
[2024-05-19 00:11:06]  surl=/home/boinc/slots/0/PanDA_Pilot-6209125716/log.38776125._017104.job.log.tgz.1
[2024-05-19 00:11:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/e9/log.38776125._017104.job.log.tgz.1
[2024-05-19 00:11:06]  workdir=None
[2024-05-19 00:11:06] ]
[2024-05-19 00:11:06] 2024-05-19 07:10:33,436 | INFO     | transferring file log.38776125._017104.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209125716/log.38776125._017104.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-19 00:11:06] 2024-05-19 07:10:33,436 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209125716/log.38776125._017104.job.log.tgz.1 /home/boinc/slots/0/log.38776125._017104.job.log.t
[2024-05-19 00:11:06] 2024-05-19 07:10:33,464 | INFO     | adding to output.list: log.38776125._017104.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cd/e9/log.38776125._017104.job.log.tg
[2024-05-19 00:11:06] 2024-05-19 07:10:33,465 | INFO     | summary of transferred files:
[2024-05-19 00:11:06] 2024-05-19 07:10:33,465 | INFO     |  -- lfn=log.38776125._017104.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 00:11:06] 2024-05-19 07:10:33,466 | INFO     | stage-out finished correctly
[2024-05-19 00:11:06] 2024-05-19 07:10:35,055 | INFO     | monitor loop #338: job 0:6209125716 is in state 'finished'
[2024-05-19 00:11:06] 2024-05-19 07:10:35,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 00:11:06] 2024-05-19 07:10:36,625 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 00:11:06] 2024-05-19 07:10:37,559 | INFO     | monitor loop #339: job 0:6209125716 is in state 'finished'
[2024-05-19 00:11:06] 2024-05-19 07:10:37,559 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 00:11:06] 2024-05-19 07:10:38,771 | INFO     | job 6209125716 has state=finished
[2024-05-19 00:11:06] 2024-05-19 07:10:38,771 | INFO     | preparing for final server update for job 6209125716 in state='finished'
[2024-05-19 00:11:06] 2024-05-19 07:10:38,772 | INFO     | this job has now completed (state=finished)
[2024-05-19 00:11:06] 2024-05-19 07:10:38,772 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 00:11:06] 2024-05-19 07:10:38,772 | INFO     | job 6209125716 has finished - writing final server update
[2024-05-19 00:11:06] 2024-05-19 07:10:38,772 | INFO     | total number of processed events: 400 (read)
[2024-05-19 00:11:06] 2024-05-19 07:10:38,779 | INFO     | executing command: lscpu
[2024-05-19 00:11:06] 2024-05-19 07:10:38,850 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-19 00:11:06] 2024-05-19 07:10:38,850 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 00:11:06] 2024-05-19 07:10:38,904 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 00:11:06] 2024-05-19 07:10:40,063 | INFO     | monitor loop #340: job 0:6209125716 is in state 'finished'
[2024-05-19 00:11:06] 2024-05-19 07:10:40,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 00:11:06] 2024-05-19 07:10:42,566 | INFO     | monitor loop #341: job 0:6209125716 is in state 'finished'
[2024-05-19 00:11:06] 2024-05-19 07:10:42,566 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 00:11:06] 2024-05-19 07:10:43,212 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 00:11:06] 2024-05-19 07:10:43,213 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209125716/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 00:11:06] 2024-05-19 07:10:43,214 | INFO     | extracted standard info from prmon json
[2024-05-19 00:11:06] 2024-05-19 07:10:43,214 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 00:11:06] 2024-05-19 07:10:43,214 | WARNING  | GPU info not found in prmon json
[2024-05-19 00:11:06] 2024-05-19 07:10:43,214 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 00:11:06] 2024-05-19 07:10:43,214 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 00:11:06] 2024-05-19 07:10:43,215 | INFO     | fitting pss+swap vs Time
[2024-05-19 00:11:06] 2024-05-19 07:10:43,216 | INFO     | model: linear, x: [1716098669.0, 1716098730.0, 1716098791.0, 1716098852.0, 1716098913.0, 1716098974.0, 1716099035.0, 1716099096.0, 1716099157.0, 1716099218.0, 1716
[2024-05-19 00:11:06] 2024-05-19 07:10:43,216 | INFO     | sum of square deviations: 77515872.0
[2024-05-19 00:11:06] 2024-05-19 07:10:43,216 | INFO     | sum of deviations: 22529417249.000004
[2024-05-19 00:11:06] 2024-05-19 07:10:43,216 | INFO     | mean x: 1716100560.0
[2024-05-19 00:11:06] 2024-05-19 07:10:43,216 | INFO     | mean y: 2531831.761904762
[2024-05-19 00:11:06] 2024-05-19 07:10:43,216 | INFO     | -- intersect: -498769455890.7341
[2024-05-19 00:11:06] 2024-05-19 07:10:43,216 | INFO     | intersect: -498769455890.7341
[2024-05-19 00:11:06] 2024-05-19 07:10:43,216 | INFO     | chi2: 1.7449866606272328
[2024-05-19 00:11:06] 2024-05-19 07:10:43,216 | INFO     | -- intersect: -498769455890.7341
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | current memory leak: 290.64 B/s (using 63 data points, chi2=1.74)
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | ..............................
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | . Timing measurements:
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | . get job = 0 s
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | . initial setup = 2 s
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | . payload setup = 6 s
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | . stage-in = 0 s
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | . payload execution = 4269 s
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | . stage-out = 0 s
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | . log creation = 0 s
[2024-05-19 00:11:06] 2024-05-19 07:10:43,217 | INFO     | ..............................
[2024-05-19 00:11:06] 2024-05-19 07:10:43,609 | INFO     | 
[2024-05-19 00:11:06] 2024-05-19 07:10:43,610 | INFO     | job summary report
[2024-05-19 00:11:06] 2024-05-19 07:10:43,610 | INFO     | --------------------------------------------------
[2024-05-19 00:11:06] 2024-05-19 07:10:43,610 | INFO     | PanDA job id: 6209125716
[2024-05-19 00:11:06] 2024-05-19 07:10:43,610 | INFO     | task id: 38776125
[2024-05-19 00:11:06] 2024-05-19 07:10:43,610 | INFO     | errors: (none)
[2024-05-19 00:11:06] 2024-05-19 07:10:43,610 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 00:11:06] 2024-05-19 07:10:43,610 | INFO     | pilot state: finished 
[2024-05-19 00:11:06] 2024-05-19 07:10:43,610 | INFO     | transexitcode: 0
[2024-05-19 00:11:06] 2024-05-19 07:10:43,610 | INFO     | exeerrorcode: 0
[2024-05-19 00:11:06] 2024-05-19 07:10:43,611 | INFO     | exeerrordiag: 
[2024-05-19 00:11:06] 2024-05-19 07:10:43,611 | INFO     | exitcode: 0
[2024-05-19 00:11:06] 2024-05-19 07:10:43,611 | INFO     | exitmsg: OK
[2024-05-19 00:11:06] 2024-05-19 07:10:43,611 | INFO     | cpuconsumptiontime: 39415 s
[2024-05-19 00:11:06] 2024-05-19 07:10:43,611 | INFO     | nevents: 400
[2024-05-19 00:11:06] 2024-05-19 07:10:43,611 | INFO     | neventsw: 0
[2024-05-19 00:11:06] 2024-05-19 07:10:43,611 | INFO     | pid: 227944
[2024-05-19 00:11:06] 2024-05-19 07:10:43,611 | INFO     | pgrp: 227944
[2024-05-19 00:11:06] 2024-05-19 07:10:43,611 | INFO     | corecount: 12
[2024-05-19 00:11:06] 2024-05-19 07:10:43,612 | INFO     | event service: False
[2024-05-19 00:11:06] 2024-05-19 07:10:43,612 | INFO     | sizes: {0: 2392241, 5: 2392447, 11: 2392503, 4279: 2418521, 4280: 2427475, 4283: 2427531, 4290: 2427829}
[2024-05-19 00:11:06] 2024-05-19 07:10:43,612 | INFO     | --------------------------------------------------
[2024-05-19 00:11:06] 2024-05-19 07:10:43,612 | INFO     | 
[2024-05-19 00:11:06] 2024-05-19 07:10:43,612 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 00:11:06] 2024-05-19 07:10:43,641 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,642 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,642 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,642 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,642 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,642 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,642 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,642 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,643 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,643 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,643 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,643 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,643 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,643 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,643 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,643 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 00:11:06] 2024-05-19 07:10:43,643 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,644 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 00:11:06] 2024-05-19 07:10:43,644 | INFO     | job 6209125716 has completed (purged errors)
[2024-05-19 00:11:06] 2024-05-19 07:10:43,644 | INFO     | overall cleanup function is called
[2024-05-19 00:11:06] 2024-05-19 07:10:44,652 | INFO     | --- collectZombieJob: --- 10, [227944]
[2024-05-19 00:11:06] 2024-05-19 07:10:44,653 | INFO     | zombie collector waiting for pid 227944
[2024-05-19 00:11:06] 2024-05-19 07:10:44,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 00:11:06] 2024-05-19 07:10:45,658 | INFO     | collected zombie processes
[2024-05-19 00:11:06] 2024-05-19 07:10:45,659 | INFO     | will now attempt to kill all subprocesses of pid=227944
[2024-05-19 00:11:06] 2024-05-19 07:10:45,861 | INFO     | process IDs to be killed: [227944] (in reverse order)
[2024-05-19 00:11:06] 2024-05-19 07:10:46,002 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 00:11:06] 2024-05-19 07:10:46,003 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 00:11:06] 2024-05-19 07:10:46,015 | INFO     | did not find any defunct processes belonging to 227944
[2024-05-19 00:11:06] 2024-05-19 07:10:46,025 | INFO     | did not find any defunct processes belonging to 227944
[2024-05-19 00:11:06] 2024-05-19 07:10:46,025 | INFO     | ready for new job
[2024-05-19 00:11:06] 2024-05-19 07:10:46,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 00:11:06] 2024-05-19 07:10:46,027 | INFO     | *************************************
[2024-05-19 00:11:06] 2024-05-19 07:10:46,028 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 00:11:06] 2024-05-19 07:10:46,028 | INFO     | *************************************
[2024-05-19 00:11:06] 2024-05-19 07:10:46,028 | INFO     | 
[2024-05-19 00:11:06] 2024-05-19 07:10:46,032 | INFO     | architecture information:
[2024-05-19 00:11:06] 2024-05-19 07:10:46,033 | INFO     | executing command: cat /etc/os-release
[2024-05-19 00:11:06] 2024-05-19 07:10:46,056 | INFO     | cat /etc/os-release:
[2024-05-19 00:11:06] NAME="CentOS Linux"
[2024-05-19 00:11:06] VERSION="7 (Core)"
[2024-05-19 00:11:06] ID="centos"
[2024-05-19 00:11:06] ID_LIKE="rhel fedora"
[2024-05-19 00:11:06] VERSION_ID="7"
[2024-05-19 00:11:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 00:11:06] ANSI_COLOR="0;31"
[2024-05-19 00:11:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 00:11:06] HOME_URL="https://www.centos.org/"
[2024-05-19 00:11:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 00:11:06] 
[2024-05-19 00:11:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 00:11:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 00:11:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 00:11:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 00:11:06] 
[2024-05-19 00:11:06] 2024-05-19 07:10:46,057 | INFO     | *************************************
[2024-05-19 00:11:06] 2024-05-19 07:10:46,560 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 00:11:06] 2024-05-19 07:10:46,587 | INFO     | sufficient remaining disk space (1692618719232 B)
[2024-05-19 00:11:06] 2024-05-19 07:10:46,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 00:11:06] 2024-05-19 07:10:46,588 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 00:11:06] 2024-05-19 07:10:46,588 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 00:11:06] 2024-05-19 07:10:46,589 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 00:11:06] 2024-05-19 07:10:46,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 00:11:06] 2024-05-19 07:10:46,590 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 00:11:06] 2024-05-19 07:10:46,590 | INFO     | aborting loop
[2024-05-19 00:11:06] 2024-05-19 07:10:46,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 00:11:06] 2024-05-19 07:10:46,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 00:11:06] 2024-05-19 07:10:46,964 | INFO     | all data control threads have been joined
[2024-05-19 00:11:06] 2024-05-19 07:10:47,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 00:11:06] 2024-05-19 07:10:47,338 | INFO     | all payload control threads have been joined
[2024-05-19 00:11:06] 2024-05-19 07:10:47,589 | INFO     | [job] retrieve thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:47,596 | INFO     | [job] job monitor thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:47,939 | INFO     | all job control threads have been joined
[2024-05-19 00:11:06] 2024-05-19 07:10:47,970 | INFO     | [data] control thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:47,985 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:47,987 | INFO     | [payload] validate_post thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:48,018 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:48,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 00:11:06] 2024-05-19 07:10:48,344 | INFO     | [payload] control thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:48,498 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:48,595 | INFO     | [data] copytool_in thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:48,596 | INFO     | [data] copytool_out thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:48,606 | INFO     | [payload] failed_post thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:48,737 | INFO     | [job] validate thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:48,944 | INFO     | [job] control thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:49,302 | INFO     | [job] queue monitor thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:51,235 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:56,952 | INFO     | job.realtimelogging is not enabled
[2024-05-19 00:11:06] 2024-05-19 07:10:57,958 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 00:11:06] 2024-05-19 07:10:59,929 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116344407872)>', '<ExcThread(monitor, started 140115791836928)>']
[2024-05-19 00:11:06] 2024-05-19 07:11:00,664 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 00:11:06] 2024-05-19 07:11:00,664 | INFO     | [monitor] control thread has ended
[2024-05-19 00:11:06] 2024-05-19 07:11:04,954 | INFO     | all workflow threads have been joined
[2024-05-19 00:11:06] 2024-05-19 07:11:04,955 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 00:11:06] 2024-05-19 07:11:04,955 | INFO     | traces error code: 0
[2024-05-19 00:11:06] 2024-05-19 07:11:04,955 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 00:11:06] 2024-05-19 07:11:05,052 [wrapper] ==== pilot stdout END ====
[2024-05-19 00:11:06] 2024-05-19 07:11:05,056 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 00:11:06] 2024-05-19 07:11:05,059 [wrapper] pilotpid: 221468
[2024-05-19 00:11:06] 2024-05-19 07:11:05,063 [wrapper] Pilot exit status: 0
[2024-05-19 00:11:06] 2024-05-19 07:11:05,078 [wrapper] pandaids: 6209125716
[2024-05-19 00:11:06] 2024-05-19 07:11:05,177 [wrapper] cleanup: SIGTERM to supervisor_pilot  45819 221469
[2024-05-19 00:11:06] 2024-05-19 07:11:05,181 [wrapper] Test setup, not cleaning
[2024-05-19 00:11:06] 2024-05-19 07:11:05,184 [wrapper] ==== wrapper stdout END ====
[2024-05-19 00:11:06] 2024-05-19 07:11:05,187 [wrapper] ==== wrapper stderr END ====
[2024-05-19 00:11:06] 2024-05-19 07:11:05,194 [wrapper] apfmon messages muted
[2024-05-19 00:11:06]  *** Error codes and diagnostics ***
[2024-05-19 00:11:06]     "exeErrorCode": 0,
[2024-05-19 00:11:06]     "exeErrorDiag": "",
[2024-05-19 00:11:06]     "pilotErrorCode": 0,
[2024-05-19 00:11:06]     "pilotErrorDiag": "",
[2024-05-19 00:11:06]  *** Listing of results directory ***
[2024-05-19 00:11:06] total 821124
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc    467845 May 18 09:33 pilot3.tar.gz
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc      5633 May 18 09:35 queuedata.json
[2024-05-19 00:11:06] -rwx------ 1 boinc boinc     32251 May 18 09:36 runpilot2-wrapper.sh
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc       100 May 18 22:58 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 00:11:06] -rwxr-xr-x 1 boinc boinc      7986 May 18 22:58 run_atlas
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc       105 May 18 22:58 job.xml
[2024-05-19 00:11:06] -rw-r--r-- 2 boinc boinc 597616144 May 18 22:58 EVNT.38776119._000322.pool.root.1
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc      6622 May 18 22:58 init_data.xml
[2024-05-19 00:11:06] -rw-r--r-- 2 boinc boinc     17537 May 18 22:58 start_atlas.sh
[2024-05-19 00:11:06] drwxrwx--x 2 boinc boinc      4096 May 18 22:58 shared
[2024-05-19 00:11:06] -rw-r--r-- 2 boinc boinc    480016 May 18 22:58 input.tar.gz
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc         0 May 18 22:58 boinc_lockfile
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc      2633 May 18 22:58 pandaJob.out
[2024-05-19 00:11:06] -rw------- 1 boinc boinc       424 May 18 22:58 setup.sh.local
[2024-05-19 00:11:06] -rw------- 1 boinc boinc   1013987 May 18 22:58 agis_schedconf.cvmfs.json
[2024-05-19 00:11:06] -rw------- 1 boinc boinc         0 May 18 22:58 agis_ddmendpoints.agis.ALL.json
[2024-05-19 00:11:06] -rw------- 1 boinc boinc   1324701 May 18 22:58 cric_ddmendpoints.json
[2024-05-19 00:11:06] drwx------ 4 boinc boinc      4096 May 18 22:58 pilot3
[2024-05-19 00:11:06] -rw------- 1 boinc boinc 238077990 May 19 00:09 HITS.38776125._017104.pool.root.1
[2024-05-19 00:11:06] -rw------- 1 boinc boinc        95 May 19 00:10 pilot_heartbeat.json
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc       530 May 19 00:10 boinc_task_state.xml
[2024-05-19 00:11:06] -rw------- 1 boinc boinc      1060 May 19 00:10 memory_monitor_summary.json
[2024-05-19 00:11:06] -rw------- 1 boinc boinc    372935 May 19 00:10 log.38776125._017104.job.log.tgz.1
[2024-05-19 00:11:06] -rw------- 1 boinc boinc      7778 May 19 00:10 heartbeat.json
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc      8192 May 19 00:10 boinc_mmap_file
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc        27 May 19 00:10 wrapper_checkpoint.txt
[2024-05-19 00:11:06] -rw------- 1 boinc boinc      4405 May 19 00:11 pilotlog.txt
[2024-05-19 00:11:06] -rw------- 1 boinc boinc    430913 May 19 00:11 log.38776125._017104.job.log.1
[2024-05-19 00:11:06] -rw------- 1 boinc boinc       357 May 19 00:11 output.list
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc       620 May 19 00:11 runtime_log
[2024-05-19 00:11:06] -rw------- 1 boinc boinc    819200 May 19 00:11 result.tar.gz
[2024-05-19 00:11:06] -rw------- 1 boinc boinc       652 May 19 00:11 WS6KDmwDcS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmv8LKDmaq0Nqm.diag
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc     11286 May 19 00:11 runtime_log.err
[2024-05-19 00:11:06] -rw-r--r-- 1 boinc boinc     21876 May 19 00:11 stderr.txt
[2024-05-19 00:11:06] HITS file was successfully produced:
[2024-05-19 00:11:06] -rw------- 1 boinc boinc 238077990 May 19 00:09 shared/HITS.pool.root.1
[2024-05-19 00:11:06]  *** Contents of shared directory: ***
[2024-05-19 00:11:06] total 817412
[2024-05-19 00:11:06] -rw-r--r-- 2 boinc boinc 597616144 May 18 22:58 ATLAS.root_0
[2024-05-19 00:11:06] -rw-r--r-- 2 boinc boinc     17537 May 18 22:58 start_atlas.sh
[2024-05-19 00:11:06] -rw-r--r-- 2 boinc boinc    480016 May 18 22:58 input.tar.gz
[2024-05-19 00:11:06] -rw------- 1 boinc boinc 238077990 May 19 00:09 HITS.pool.root.1
[2024-05-19 00:11:06] -rw------- 1 boinc boinc    819200 May 19 00:11 result.tar.gz
00:11:07 (217262): run_atlas exited; CPU time 39279.987595
00:11:07 (217262): called boinc_finish(0)

</stderr_txt>
]]>

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