Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:38:11 (925762): wrapper (7.7.26015): starting
11:38:11 (925762): wrapper: running run_atlas (--nthreads 4)
[2024-05-21 11:38:11] Arguments: --nthreads 4
[2024-05-21 11:38:11] Threads: 4
[2024-05-21 11:38:11] Checking for CVMFS
[2024-05-21 11:38:11] No cvmfs_config command found, will try listing directly
[2024-05-21 11:38:11] CVMFS is ok
[2024-05-21 11:38:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-21 11:38:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-21 11:38:11] Further information can be found at the LHC@home message board.
[2024-05-21 11:38:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-21 11:38:11] Checking for apptainer binary...
[2024-05-21 11:38:11] which: no apptainer in ((null))
[2024-05-21 11:38:11] apptainer is not installed, using version from CVMFS
[2024-05-21 11:38:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-21 11:38:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2024-05-21 11:38:12] apptainer works
[2024-05-21 11:38:12] Set ATHENA_PROC_NUMBER=4
[2024-05-21 11:38:12] Set ATHENA_CORE_NUMBER=4
[2024-05-21 11:38:12] Starting ATLAS job with PandaID=6209125691
[2024-05-21 11:38:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-21 14:04:22]  *** The last 200 lines of the pilot log: ***
[2024-05-21 14:04:22] 2024-05-21 12:03:36,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-21 14:04:22] 2024-05-21 12:03:36,926 | INFO     | fitting pss+swap vs Time
[2024-05-21 14:04:22] 2024-05-21 12:03:36,926 | INFO     | model: linear, x: [1716284323.0, 1716284384.0, 1716284445.0, 1716284506.0, 1716284567.0, 1716284628.0, 1716284689.0, 1716284750.0, 1716284811.0, 1716284872.0, 1716
[2024-05-21 14:04:22] 2024-05-21 12:03:36,926 | INFO     | sum of square deviations: 906703512.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,927 | INFO     | sum of deviations: 30784111831.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,927 | INFO     | mean x: 1716288654.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,927 | INFO     | mean y: 2281720.5104895104
[2024-05-21 14:04:22] 2024-05-21 12:03:36,927 | INFO     | -- intersect: -58268609656.61751
[2024-05-21 14:04:22] 2024-05-21 12:03:36,927 | INFO     | intersect: -58268609656.61751
[2024-05-21 14:04:22] 2024-05-21 12:03:36,927 | INFO     | chi2: 4.338405011328094
[2024-05-21 14:04:22] 2024-05-21 12:03:36,927 | INFO     | model: linear, x: [1716284323.0, 1716284384.0, 1716284445.0, 1716284506.0, 1716284567.0, 1716284628.0, 1716284689.0, 1716284750.0, 1716284811.0, 1716284872.0, 1716
[2024-05-21 14:04:22] 2024-05-21 12:03:36,927 | INFO     | sum of square deviations: 814878534.5
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | sum of deviations: 38273192912.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | mean x: 1716288501.5
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | mean y: 2293745.0144927534
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | -- intersect: -80608298054.24329
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | intersect: -80608298054.24329
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | chi2: 3.616542756450078
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | current chi2=3.616542756450078 (change=16.638885788513225 %)
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | right removable region: 137
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | model: linear, x: [1716284628.0, 1716284689.0, 1716284750.0, 1716284811.0, 1716284872.0, 1716284933.0, 1716284994.0, 1716285055.0, 1716285116.0, 1716285177.0, 1716
[2024-05-21 14:04:22] 2024-05-21 12:03:36,928 | INFO     | sum of square deviations: 814878534.5
[2024-05-21 14:04:22] 2024-05-21 12:03:36,929 | INFO     | sum of deviations: 755381848.9999962
[2024-05-21 14:04:22] 2024-05-21 12:03:36,929 | INFO     | mean x: 1716288806.5
[2024-05-21 14:04:22] 2024-05-21 12:03:36,929 | INFO     | mean y: 2331345.3188405796
[2024-05-21 14:04:22] 2024-05-21 12:03:36,929 | INFO     | -- intersect: -1588646152.7784133
[2024-05-21 14:04:22] 2024-05-21 12:03:36,929 | INFO     | intersect: -1588646152.7784133
[2024-05-21 14:04:22] 2024-05-21 12:03:36,929 | INFO     | chi2: 2.0853942550599394
[2024-05-21 14:04:22] 2024-05-21 12:03:36,929 | INFO     | current chi2=2.0853942550599394 (change=51.931775626878405 %)
[2024-05-21 14:04:22] 2024-05-21 12:03:36,929 | INFO     | model: linear, x: [1716284933.0, 1716284994.0, 1716285055.0, 1716285116.0, 1716285177.0, 1716285238.0, 1716285299.0, 1716285360.0, 1716285421.0, 1716285482.0, 1716
[2024-05-21 14:04:22] 2024-05-21 12:03:36,929 | INFO     | sum of square deviations: 729472282.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,930 | INFO     | sum of deviations: -21650855355.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,930 | INFO     | mean x: 1716288959.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,930 | INFO     | mean y: 2371363.060150376
[2024-05-21 14:04:22] 2024-05-21 12:03:36,930 | INFO     | -- intersect: 50942105353.79254
[2024-05-21 14:04:22] 2024-05-21 12:03:36,930 | INFO     | intersect: 50942105353.79254
[2024-05-21 14:04:22] 2024-05-21 12:03:36,930 | INFO     | chi2: 0.921583147002351
[2024-05-21 14:04:22] 2024-05-21 12:03:36,930 | INFO     | current chi2=0.921583147002351 (change=55.80772581653331 %)
[2024-05-21 14:04:22] 2024-05-21 12:03:36,930 | INFO     | model: linear, x: [1716285238.0, 1716285299.0, 1716285360.0, 1716285421.0, 1716285482.0, 1716285543.0, 1716285604.0, 1716285665.0, 1716285726.0, 1716285787.0, 1716
[2024-05-21 14:04:22] 2024-05-21 12:03:36,930 | INFO     | sum of square deviations: 650252192.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | sum of deviations: -20860772314.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | mean x: 1716289111.5
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | mean y: 2369711.703125
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | -- intersect: 55062724479.40971
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | intersect: 55062724479.40971
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | chi2: 0.8957605996919734
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | current chi2=0.8957605996919734 (change=2.8019769452567593 %)
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | left removable region: 30
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | model: linear, x: [1716286153.0, 1716286214.0, 1716286275.0, 1716286336.0, 1716286397.0, 1716286458.0, 1716286519.0, 1716286580.0, 1716286641.0, 1716286702.0, 1716
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | sum of square deviations: 379832238.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | sum of deviations: 862548783.9999995
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | mean x: 1716289386.0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,931 | INFO     | mean y: 2353739.579439252
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | -- intersect: -3895112496.254934
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | intersect: -3895112496.254934
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | chi2: 0.0005925767232014333
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | -- intersect: -3895112496.254934
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | current memory leak: 2.27 B/s (using 107 data points, chi2=0.00)
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | ..............................
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | . Timing measurements:
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | . get job = 0 s
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | . initial setup = 1 s
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | . payload setup = 4 s
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | . stage-in = 0 s
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | . payload execution = 8684 s
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | . stage-out = 0 s
[2024-05-21 14:04:22] 2024-05-21 12:03:36,932 | INFO     | . log creation = 0 s
[2024-05-21 14:04:22] 2024-05-21 12:03:36,933 | INFO     | ..............................
[2024-05-21 14:04:22] 2024-05-21 12:03:36,986 | INFO     | 
[2024-05-21 14:04:22] 2024-05-21 12:03:36,986 | INFO     | job summary report
[2024-05-21 14:04:22] 2024-05-21 12:03:36,986 | INFO     | --------------------------------------------------
[2024-05-21 14:04:22] 2024-05-21 12:03:36,986 | INFO     | PanDA job id: 6209125691
[2024-05-21 14:04:22] 2024-05-21 12:03:36,986 | INFO     | task id: 38776125
[2024-05-21 14:04:22] 2024-05-21 12:03:36,986 | INFO     | errors: (none)
[2024-05-21 14:04:22] 2024-05-21 12:03:36,986 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-21 14:04:22] 2024-05-21 12:03:36,986 | INFO     | pilot state: finished 
[2024-05-21 14:04:22] 2024-05-21 12:03:36,986 | INFO     | transexitcode: 0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | exeerrorcode: 0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | exeerrordiag: 
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | exitcode: 0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | exitmsg: OK
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | cpuconsumptiontime: 31910 s
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | nevents: 400
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | neventsw: 0
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | pid: 937080
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | pgrp: 937080
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | corecount: 4
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | event service: False
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | sizes: {0: 2392253, 3: 2392459, 11: 2392487, 8692: 2420677, 8694: 2429659, 8697: 2429715, 8702: 2430013}
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | --------------------------------------------------
[2024-05-21 14:04:22] 2024-05-21 12:03:36,987 | INFO     | 
[2024-05-21 14:04:22] 2024-05-21 12:03:36,988 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2024-05-21 14:04:22] 2024-05-21 12:03:37,006 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,006 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,006 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,006 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,007 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-21 14:04:22] 2024-05-21 12:03:37,008 | INFO     | job 6209125691 has completed (purged errors)
[2024-05-21 14:04:22] 2024-05-21 12:03:37,008 | INFO     | overall cleanup function is called
[2024-05-21 14:04:22] 2024-05-21 12:03:38,014 | INFO     | --- collectZombieJob: --- 10, [937080]
[2024-05-21 14:04:22] 2024-05-21 12:03:38,014 | INFO     | zombie collector waiting for pid 937080
[2024-05-21 14:04:22] 2024-05-21 12:03:38,014 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-21 14:04:22] 2024-05-21 12:03:39,018 | INFO     | collected zombie processes
[2024-05-21 14:04:22] 2024-05-21 12:03:39,018 | INFO     | will now attempt to kill all subprocesses of pid=937080
[2024-05-21 14:04:22] 2024-05-21 12:03:39,193 | INFO     | process IDs to be killed: [937080] (in reverse order)
[2024-05-21 14:04:22] 2024-05-21 12:03:39,339 | WARNING  | found no corresponding commands to process id(s)
[2024-05-21 14:04:22] 2024-05-21 12:03:39,339 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-21 14:04:22] 2024-05-21 12:03:39,348 | INFO     | did not find any defunct processes belonging to 937080
[2024-05-21 14:04:22] 2024-05-21 12:03:39,356 | INFO     | did not find any defunct processes belonging to 937080
[2024-05-21 14:04:22] 2024-05-21 12:03:39,356 | INFO     | ready for new job
[2024-05-21 14:04:22] 2024-05-21 12:03:39,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-21 14:04:22] 2024-05-21 12:03:39,357 | INFO     | *************************************
[2024-05-21 14:04:22] 2024-05-21 12:03:39,358 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-21 14:04:22] 2024-05-21 12:03:39,358 | INFO     | *************************************
[2024-05-21 14:04:22] 2024-05-21 12:03:39,358 | INFO     | 
[2024-05-21 14:04:22] 2024-05-21 12:03:39,360 | INFO     | architecture information:
[2024-05-21 14:04:22] 2024-05-21 12:03:39,360 | INFO     | executing command: cat /etc/os-release
[2024-05-21 14:04:22] 2024-05-21 12:03:39,380 | INFO     | cat /etc/os-release:
[2024-05-21 14:04:22] NAME="CentOS Linux"
[2024-05-21 14:04:22] VERSION="7 (Core)"
[2024-05-21 14:04:22] ID="centos"
[2024-05-21 14:04:22] ID_LIKE="rhel fedora"
[2024-05-21 14:04:22] VERSION_ID="7"
[2024-05-21 14:04:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-21 14:04:22] ANSI_COLOR="0;31"
[2024-05-21 14:04:22] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-21 14:04:22] HOME_URL="https://www.centos.org/"
[2024-05-21 14:04:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-21 14:04:22] 
[2024-05-21 14:04:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-21 14:04:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-21 14:04:22] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-21 14:04:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-21 14:04:22] 
[2024-05-21 14:04:22] 2024-05-21 12:03:39,380 | INFO     | *************************************
[2024-05-21 14:04:22] 2024-05-21 12:03:39,882 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2024-05-21 14:04:22] 2024-05-21 12:03:39,901 | INFO     | sufficient remaining disk space (580047077376 B)
[2024-05-21 14:04:22] 2024-05-21 12:03:39,901 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-21 14:04:22] 2024-05-21 12:03:39,901 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-21 14:04:22] 2024-05-21 12:03:39,901 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-21 14:04:22] 2024-05-21 12:03:39,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-21 14:04:22] 2024-05-21 12:03:39,902 | INFO     | found 0 job(s) in 20 queues
[2024-05-21 14:04:22] 2024-05-21 12:03:39,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-21 14:04:22] 2024-05-21 12:03:39,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-21 14:04:22] 2024-05-21 12:03:40,012 | INFO     | all data control threads have been joined
[2024-05-21 14:04:22] 2024-05-21 12:03:40,508 | INFO     | all job control threads have been joined
[2024-05-21 14:04:22] 2024-05-21 12:03:40,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-21 14:04:22] 2024-05-21 12:03:40,520 | INFO     | aborting loop
[2024-05-21 14:04:22] 2024-05-21 12:03:40,906 | INFO     | [job] retrieve thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:40,911 | INFO     | [payload] validate_post thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:41,018 | INFO     | [data] control thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:41,144 | INFO     | [data] copytool_in thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:41,307 | INFO     | all payload control threads have been joined
[2024-05-21 14:04:22] 2024-05-21 12:03:41,514 | INFO     | [job] control thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:41,522 | INFO     | [job] job monitor thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:41,581 | INFO     | [payload] execute_payloads thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:41,797 | INFO     | [payload] failed_post thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:41,907 | INFO     | [data] copytool_out thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:41,994 | INFO     | [job] validate thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:41,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-21 14:04:22] 2024-05-21 12:03:42,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-21 14:04:22] 2024-05-21 12:03:42,302 | INFO     | [job] create_data_payload thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:42,313 | INFO     | [payload] control thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:42,397 | INFO     | [payload] validate_pre thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:43,001 | INFO     | [job] queue monitor thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:46,088 | INFO     | [data] queue_monitor thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:50,019 | INFO     | job.realtimelogging is not enabled
[2024-05-21 14:04:22] 2024-05-21 12:03:51,024 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-21 14:04:22] 2024-05-21 12:03:51,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47398825944128)>', '<ExcThread(monitor, started 47399204574976)>']
[2024-05-21 14:04:22] 2024-05-21 12:03:51,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-21 14:04:22] 2024-05-21 12:03:51,964 | INFO     | [monitor] control thread has ended
[2024-05-21 14:04:22] 2024-05-21 12:03:56,187 | INFO     | all workflow threads have been joined
[2024-05-21 14:04:22] 2024-05-21 12:03:56,187 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-21 14:04:22] 2024-05-21 12:03:56,188 | INFO     | traces error code: 0
[2024-05-21 14:04:22] 2024-05-21 12:03:56,188 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-21 14:04:22] 2024-05-21 12:03:56,300 [wrapper] ==== pilot stdout END ====
[2024-05-21 14:04:22] 2024-05-21 12:03:56,303 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-21 14:04:22] 2024-05-21 12:03:56,315 [wrapper] pilotpid: 930065
[2024-05-21 14:04:22] 2024-05-21 12:03:56,322 [wrapper] Pilot exit status: 0
[2024-05-21 14:04:22] 2024-05-21 12:03:56,388 [wrapper] pandaids: 6209125691
[2024-05-21 14:04:22] 2024-05-21 12:03:56,503 [wrapper] cleanup: SIGTERM to supervisor_pilot 1181862 930066
[2024-05-21 14:04:22] 2024-05-21 12:03:56,506 [wrapper] Test setup, not cleaning
[2024-05-21 14:04:22] 2024-05-21 12:03:56,509 [wrapper] ==== wrapper stdout END ====
[2024-05-21 14:04:22] 2024-05-21 12:03:56,511 [wrapper] ==== wrapper stderr END ====
[2024-05-21 14:04:22] 2024-05-21 12:03:56,515 [wrapper] apfmon messages muted
[2024-05-21 14:04:22]  *** Error codes and diagnostics ***
[2024-05-21 14:04:22]     "exeErrorCode": 0,
[2024-05-21 14:04:22]     "exeErrorDiag": "",
[2024-05-21 14:04:22]     "pilotErrorCode": 0,
[2024-05-21 14:04:22]     "pilotErrorDiag": "",
[2024-05-21 14:04:22]  *** Listing of results directory ***
[2024-05-21 14:04:22] total 834296
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc      5633 May 18 18:32 queuedata.json
[2024-05-21 14:04:22] -rwx------ 1 boinc boinc     32251 May 18 18:33 runpilot2-wrapper.sh
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc    467845 May 18 18:33 pilot3.tar.gz
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc       100 May 21 11:38 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-21 14:04:22] -rwxr-xr-x 1 boinc boinc      7986 May 21 11:38 run_atlas
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc       105 May 21 11:38 job.xml
[2024-05-21 14:04:22] -rw-r--r-- 2 boinc boinc 600969399 May 21 11:38 EVNT.38776119._000359.pool.root.1
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc      6663 May 21 11:38 init_data.xml
[2024-05-21 14:04:22] -rw-r--r-- 2 boinc boinc     17537 May 21 11:38 start_atlas.sh
[2024-05-21 14:04:22] drwxrwx--x 2 boinc boinc      4096 May 21 11:38 shared
[2024-05-21 14:04:22] -rw-r--r-- 2 boinc boinc    480011 May 21 11:38 input.tar.gz
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc         0 May 21 11:38 boinc_lockfile
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc      2632 May 21 11:38 pandaJob.out
[2024-05-21 14:04:22] -rw------- 1 boinc boinc       424 May 21 11:38 setup.sh.local
[2024-05-21 14:04:22] -rw------- 1 boinc boinc   1013561 May 21 11:38 agis_schedconf.cvmfs.json
[2024-05-21 14:04:22] -rw------- 1 boinc boinc         0 May 21 11:38 agis_ddmendpoints.agis.ALL.json
[2024-05-21 14:04:22] -rw------- 1 boinc boinc   1324700 May 21 11:38 cric_ddmendpoints.json
[2024-05-21 14:04:22] drwx------ 4 boinc boinc      4096 May 21 11:38 pilot3
[2024-05-21 14:04:22] -rw------- 1 boinc boinc        95 May 21 14:02 pilot_heartbeat.json
[2024-05-21 14:04:22] -rw------- 1 boinc boinc 247480981 May 21 14:02 HITS.38776125._017079.pool.root.1
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc       529 May 21 14:03 boinc_task_state.xml
[2024-05-21 14:04:22] -rw------- 1 boinc boinc      1064 May 21 14:03 memory_monitor_summary.json
[2024-05-21 14:04:22] -rw------- 1 boinc boinc    271675 May 21 14:03 log.38776125._017079.job.log.tgz.1
[2024-05-21 14:04:22] -rw------- 1 boinc boinc      7767 May 21 14:03 heartbeat.json
[2024-05-21 14:04:22] -rw------- 1 boinc boinc      4416 May 21 14:03 pilotlog.txt
[2024-05-21 14:04:22] -rw------- 1 boinc boinc    893732 May 21 14:03 log.38776125._017079.job.log.1
[2024-05-21 14:04:22] -rw------- 1 boinc boinc       357 May 21 14:03 output.list
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc       620 May 21 14:03 runtime_log
[2024-05-21 14:04:22] -rw------- 1 boinc boinc   1187840 May 21 14:03 result.tar.gz
[2024-05-21 14:04:22] -rw------- 1 boinc boinc       654 May 21 14:03 tyoKDm7AcS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmd8LKDmorOdHn.diag
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc     11409 May 21 14:03 runtime_log.err
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc        26 May 21 14:04 wrapper_checkpoint.txt
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc      8192 May 21 14:04 boinc_mmap_file
[2024-05-21 14:04:22] -rw-r--r-- 1 boinc boinc     21289 May 21 14:04 stderr.txt
[2024-05-21 14:04:22] HITS file was successfully produced:
[2024-05-21 14:04:22] -rw------- 1 boinc boinc 247480981 May 21 14:02 shared/HITS.pool.root.1
[2024-05-21 14:04:22]  *** Contents of shared directory: ***
[2024-05-21 14:04:22] total 830232
[2024-05-21 14:04:22] -rw-r--r-- 2 boinc boinc 600969399 May 21 11:38 ATLAS.root_0
[2024-05-21 14:04:22] -rw-r--r-- 2 boinc boinc     17537 May 21 11:38 start_atlas.sh
[2024-05-21 14:04:22] -rw-r--r-- 2 boinc boinc    480011 May 21 11:38 input.tar.gz
[2024-05-21 14:04:22] -rw------- 1 boinc boinc 247480981 May 21 14:02 HITS.pool.root.1
[2024-05-21 14:04:22] -rw------- 1 boinc boinc   1187840 May 21 14:03 result.tar.gz
14:04:23 (925762): run_atlas exited; CPU time 31679.666081
14:04:23 (925762): called boinc_finish(0)

</stderr_txt>
]]>

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