Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
10:23:46 (3204659): wrapper (7.7.26015): starting
10:23:46 (3204659): wrapper: running run_atlas (--nthreads 12)
[2024-05-21 10:23:46] Arguments: --nthreads 12
[2024-05-21 10:23:46] Threads: 12
[2024-05-21 10:23:46] Checking for CVMFS
[2024-05-21 10:23:46] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-21 10:23:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-21 10:23:46] Running cvmfs_config stat atlas.cern.ch
[2024-05-21 10:23:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-21 10:23:47] 2.11.2.0 2886690 80 49608 132992 3 60 3499792 4194305 112 130560 0 108572 94.295 630641 29698 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.150.1:3128 1
[2024-05-21 10:23:47] CVMFS is ok
[2024-05-21 10:23:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-21 10:23:47] Checking for apptainer binary...
[2024-05-21 10:23:47] apptainer is not installed, using version from CVMFS
[2024-05-21 10:23:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-21 10:23:47] Trebeth
[2024-05-21 10:23:47] apptainer works
[2024-05-21 10:23:47] Set ATHENA_PROC_NUMBER=12
[2024-05-21 10:23:47] Set ATHENA_CORE_NUMBER=12
[2024-05-21 10:23:47] Starting ATLAS job with PandaID=6209106980
[2024-05-21 10:23:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/35 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-21 12:21:24]  *** The last 200 lines of the pilot log: ***
[2024-05-21 12:21:24] 2024-05-21 16:21:02,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-21 12:21:24] 2024-05-21 16:21:02,979 | INFO     | fitting pss+swap vs Time
[2024-05-21 12:21:24] 2024-05-21 16:21:02,979 | INFO     | model: linear, x: [1716301459.0, 1716301520.0, 1716301581.0, 1716301642.0, 1716301703.0, 1716301764.0, 1716301825.0, 1716301886.0, 1716301947.0, 1716302008.0, 1716
[2024-05-21 12:21:24] 2024-05-21 16:21:02,979 | INFO     | sum of square deviations: 471562330.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,980 | INFO     | sum of deviations: 31055247559.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,980 | INFO     | mean x: 1716304936.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,980 | INFO     | mean y: 2732676.356521739
[2024-05-21 12:21:24] 2024-05-21 16:21:02,980 | INFO     | -- intersect: -113026386240.35944
[2024-05-21 12:21:24] 2024-05-21 16:21:02,980 | INFO     | intersect: -113026386240.35944
[2024-05-21 12:21:24] 2024-05-21 16:21:02,980 | INFO     | chi2: 3.3461551983039586
[2024-05-21 12:21:24] 2024-05-21 16:21:02,980 | INFO     | model: linear, x: [1716301459.0, 1716301520.0, 1716301581.0, 1716301642.0, 1716301703.0, 1716301764.0, 1716301825.0, 1716301886.0, 1716301947.0, 1716302008.0, 1716
[2024-05-21 12:21:24] 2024-05-21 16:21:02,980 | INFO     | sum of square deviations: 412686807.5
[2024-05-21 12:21:24] 2024-05-21 16:21:02,981 | INFO     | sum of deviations: 30080676087.500004
[2024-05-21 12:21:24] 2024-05-21 16:21:02,981 | INFO     | mean x: 1716304783.5
[2024-05-21 12:21:24] 2024-05-21 16:21:02,981 | INFO     | mean y: 2730167.463636364
[2024-05-21 12:21:24] 2024-05-21 16:21:02,981 | INFO     | -- intersect: -125098453882.1145
[2024-05-21 12:21:24] 2024-05-21 16:21:02,981 | INFO     | intersect: -125098453882.1145
[2024-05-21 12:21:24] 2024-05-21 16:21:02,982 | INFO     | chi2: 3.349763103523074
[2024-05-21 12:21:24] 2024-05-21 16:21:02,982 | INFO     | current chi2=3.349763103523074 (change=-0.10782241125408863 %)
[2024-05-21 12:21:24] 2024-05-21 16:21:02,982 | INFO     | right removable region: 109
[2024-05-21 12:21:24] 2024-05-21 16:21:02,982 | INFO     | model: linear, x: [1716301764.0, 1716301825.0, 1716301886.0, 1716301947.0, 1716302008.0, 1716302069.0, 1716302130.0, 1716302191.0, 1716302252.0, 1716302313.0, 1716
[2024-05-21 12:21:24] 2024-05-21 16:21:02,982 | INFO     | sum of square deviations: 412686807.5
[2024-05-21 12:21:24] 2024-05-21 16:21:02,982 | INFO     | sum of deviations: -1466909974.4999988
[2024-05-21 12:21:24] 2024-05-21 16:21:02,983 | INFO     | mean x: 1716305088.5
[2024-05-21 12:21:24] 2024-05-21 16:21:02,983 | INFO     | mean y: 2816558.3181818184
[2024-05-21 12:21:24] 2024-05-21 16:21:02,983 | INFO     | -- intersect: 6103484202.281464
[2024-05-21 12:21:24] 2024-05-21 16:21:02,983 | INFO     | intersect: 6103484202.281464
[2024-05-21 12:21:24] 2024-05-21 16:21:02,983 | INFO     | chi2: 0.606760594390459
[2024-05-21 12:21:24] 2024-05-21 16:21:02,983 | INFO     | current chi2=0.606760594390459 (change=81.86693209274921 %)
[2024-05-21 12:21:24] 2024-05-21 16:21:02,983 | INFO     | model: linear, x: [1716302069.0, 1716302130.0, 1716302191.0, 1716302252.0, 1716302313.0, 1716302374.0, 1716302435.0, 1716302496.0, 1716302557.0, 1716302618.0, 1716
[2024-05-21 12:21:24] 2024-05-21 16:21:02,983 | INFO     | sum of square deviations: 358927660.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,984 | INFO     | sum of deviations: -13517581456.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,984 | INFO     | mean x: 1716305241.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,984 | INFO     | mean y: 2850140.7523809522
[2024-05-21 12:21:24] 2024-05-21 16:21:02,984 | INFO     | -- intersect: 64640654590.19829
[2024-05-21 12:21:24] 2024-05-21 16:21:02,984 | INFO     | intersect: 64640654590.19829
[2024-05-21 12:21:24] 2024-05-21 16:21:02,984 | INFO     | chi2: 0.042112826165724815
[2024-05-21 12:21:24] 2024-05-21 16:21:02,984 | INFO     | current chi2=0.042112826165724815 (change=93.0593999420759 %)
[2024-05-21 12:21:24] 2024-05-21 16:21:02,985 | INFO     | model: linear, x: [1716302374.0, 1716302435.0, 1716302496.0, 1716302557.0, 1716302618.0, 1716302679.0, 1716302740.0, 1716302801.0, 1716302862.0, 1716302923.0, 1716
[2024-05-21 12:21:24] 2024-05-21 16:21:02,985 | INFO     | sum of square deviations: 310052325.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,985 | INFO     | sum of deviations: -13020263035.000002
[2024-05-21 12:21:24] 2024-05-21 16:21:02,985 | INFO     | mean x: 1716305393.5
[2024-05-21 12:21:24] 2024-05-21 16:21:02,985 | INFO     | mean y: 2848552.54
[2024-05-21 12:21:24] 2024-05-21 16:21:02,985 | INFO     | -- intersect: 72076965951.14096
[2024-05-21 12:21:24] 2024-05-21 16:21:02,986 | INFO     | intersect: 72076965951.14096
[2024-05-21 12:21:24] 2024-05-21 16:21:02,986 | INFO     | chi2: 0.0368111954498274
[2024-05-21 12:21:24] 2024-05-21 16:21:02,986 | INFO     | current chi2=0.0368111954498274 (change=12.589111675939607 %)
[2024-05-21 12:21:24] 2024-05-21 16:21:02,986 | INFO     | left removable region: 30
[2024-05-21 12:21:24] 2024-05-21 16:21:02,986 | INFO     | model: linear, x: [1716303289.0, 1716303350.0, 1716303411.0, 1716303472.0, 1716303533.0, 1716303594.0, 1716303655.0, 1716303716.0, 1716303777.0, 1716303838.0, 1716
[2024-05-21 12:21:24] 2024-05-21 16:21:02,986 | INFO     | sum of square deviations: 152858680.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,986 | INFO     | sum of deviations: -7780954613.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,987 | INFO     | mean x: 1716305668.0
[2024-05-21 12:21:24] 2024-05-21 16:21:02,987 | INFO     | mean y: 2834193.5316455695
[2024-05-21 12:21:24] 2024-05-21 16:21:02,987 | INFO     | -- intersect: 87367820628.99377
[2024-05-21 12:21:24] 2024-05-21 16:21:02,987 | INFO     | intersect: 87367820628.99377
[2024-05-21 12:21:24] 2024-05-21 16:21:02,987 | INFO     | chi2: 0.03119704560703757
[2024-05-21 12:21:24] 2024-05-21 16:21:02,987 | INFO     | -- intersect: 87367820628.99377
[2024-05-21 12:21:24] 2024-05-21 16:21:02,987 | INFO     | current memory leak: -50.90 B/s (using 79 data points, chi2=0.03)
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | ..............................
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | . Timing measurements:
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | . get job = 0 s
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | . initial setup = 1 s
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | . payload setup = 4 s
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | . stage-in = 0 s
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | . payload execution = 6996 s
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | . stage-out = 0 s
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | . log creation = 0 s
[2024-05-21 12:21:24] 2024-05-21 16:21:02,988 | INFO     | ..............................
[2024-05-21 12:21:24] 2024-05-21 16:21:03,074 | INFO     | 
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | job summary report
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | --------------------------------------------------
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | PanDA job id: 6209106980
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | task id: 38776146
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | errors: (none)
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | pilot state: finished 
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | transexitcode: 0
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | exeerrorcode: 0
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | exeerrordiag: 
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | exitcode: 0
[2024-05-21 12:21:24] 2024-05-21 16:21:03,075 | INFO     | exitmsg: OK
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | cpuconsumptiontime: 68315 s
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | nevents: 400
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | neventsw: 0
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | pid: 3227139
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | pgrp: 3227139
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | corecount: 12
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | event service: False
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | sizes: {0: 2391327, 1: 2392262, 5: 2392468, 12: 2392524, 7004: 2419726, 7006: 2428702, 7008: 2428886, 7012: 2429056}
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | --------------------------------------------------
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | 
[2024-05-21 12:21:24] 2024-05-21 16:21:03,076 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/35
[2024-05-21 12:21:24] 2024-05-21 16:21:03,095 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,095 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,095 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,095 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,095 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-21 12:21:24] 2024-05-21 16:21:03,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,097 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-21 12:21:24] 2024-05-21 16:21:03,097 | INFO     | job 6209106980 has completed (purged errors)
[2024-05-21 12:21:24] 2024-05-21 16:21:03,097 | INFO     | overall cleanup function is called
[2024-05-21 12:21:24] 2024-05-21 16:21:04,105 | INFO     | --- collectZombieJob: --- 10, [3227139]
[2024-05-21 12:21:24] 2024-05-21 16:21:04,105 | INFO     | zombie collector waiting for pid 3227139
[2024-05-21 12:21:24] 2024-05-21 16:21:04,105 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-21 12:21:24] 2024-05-21 16:21:05,109 | INFO     | collected zombie processes
[2024-05-21 12:21:24] 2024-05-21 16:21:05,109 | INFO     | will now attempt to kill all subprocesses of pid=3227139
[2024-05-21 12:21:24] 2024-05-21 16:21:05,201 | INFO     | process IDs to be killed: [3227139] (in reverse order)
[2024-05-21 12:21:24] 2024-05-21 16:21:05,293 | WARNING  | found no corresponding commands to process id(s)
[2024-05-21 12:21:24] 2024-05-21 16:21:05,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-21 12:21:24] 2024-05-21 16:21:05,302 | INFO     | did not find any defunct processes belonging to 3227139
[2024-05-21 12:21:24] 2024-05-21 16:21:05,310 | INFO     | did not find any defunct processes belonging to 3227139
[2024-05-21 12:21:24] 2024-05-21 16:21:05,310 | INFO     | ready for new job
[2024-05-21 12:21:24] 2024-05-21 16:21:05,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-21 12:21:24] 2024-05-21 16:21:05,312 | INFO     | *************************************
[2024-05-21 12:21:24] 2024-05-21 16:21:05,312 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-21 12:21:24] 2024-05-21 16:21:05,312 | INFO     | *************************************
[2024-05-21 12:21:24] 2024-05-21 16:21:05,312 | INFO     | 
[2024-05-21 12:21:24] 2024-05-21 16:21:05,332 | INFO     | architecture information:
[2024-05-21 12:21:24] 2024-05-21 16:21:05,332 | INFO     | executing command: cat /etc/os-release
[2024-05-21 12:21:24] 2024-05-21 16:21:05,348 | INFO     | cat /etc/os-release:
[2024-05-21 12:21:24] NAME="CentOS Linux"
[2024-05-21 12:21:24] VERSION="7 (Core)"
[2024-05-21 12:21:24] ID="centos"
[2024-05-21 12:21:24] ID_LIKE="rhel fedora"
[2024-05-21 12:21:24] VERSION_ID="7"
[2024-05-21 12:21:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-21 12:21:24] ANSI_COLOR="0;31"
[2024-05-21 12:21:24] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-21 12:21:24] HOME_URL="https://www.centos.org/"
[2024-05-21 12:21:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-21 12:21:24] 
[2024-05-21 12:21:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-21 12:21:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-21 12:21:24] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-21 12:21:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-21 12:21:24] 
[2024-05-21 12:21:24] 2024-05-21 16:21:05,349 | INFO     | *************************************
[2024-05-21 12:21:24] 2024-05-21 16:21:05,852 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/35
[2024-05-21 12:21:24] 2024-05-21 16:21:05,871 | INFO     | sufficient remaining disk space (388233166848 B)
[2024-05-21 12:21:24] 2024-05-21 16:21:05,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-21 12:21:24] 2024-05-21 16:21:05,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-21 12:21:24] 2024-05-21 16:21:05,871 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-21 12:21:24] 2024-05-21 16:21:05,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-21 12:21:24] 2024-05-21 16:21:05,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-21 12:21:24] 2024-05-21 16:21:05,872 | INFO     | found 0 job(s) in 20 queues
[2024-05-21 12:21:24] 2024-05-21 16:21:05,873 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-21 12:21:24] 2024-05-21 16:21:05,873 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-21 12:21:24] 2024-05-21 16:21:06,301 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-21 12:21:24] 2024-05-21 16:21:06,301 | INFO     | aborting loop
[2024-05-21 12:21:24] 2024-05-21 16:21:06,589 | INFO     | all data control threads have been joined
[2024-05-21 12:21:24] 2024-05-21 16:21:06,785 | INFO     | all job control threads have been joined
[2024-05-21 12:21:24] 2024-05-21 16:21:06,873 | INFO     | [job] retrieve thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:06,957 | INFO     | [job] create_data_payload thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:07,141 | INFO     | [job] validate thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:07,306 | INFO     | [job] job monitor thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:07,344 | INFO     | all payload control threads have been joined
[2024-05-21 12:21:24] 2024-05-21 16:21:07,497 | INFO     | [payload] validate_post thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:07,593 | INFO     | [data] control thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:07,733 | INFO     | [payload] validate_pre thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:07,733 | INFO     | [payload] failed_post thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:07,789 | INFO     | [job] control thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:07,877 | INFO     | [data] copytool_out thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:08,082 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-21 12:21:24] 2024-05-21 16:21:08,109 | INFO     | [data] copytool_in thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:08,213 | INFO     | [payload] execute_payloads thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:08,349 | INFO     | [payload] control thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:09,085 | INFO     | [job] queue monitor thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:09,877 | INFO     | [data] queue_monitor thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:16,189 | INFO     | job.realtimelogging is not enabled
[2024-05-21 12:21:24] 2024-05-21 16:21:17,194 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-21 12:21:24] 2024-05-21 16:21:19,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302640445248)>', '<ExcThread(monitor, started 140302069257984)>']
[2024-05-21 12:21:24] 2024-05-21 16:21:19,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-21 12:21:24] 2024-05-21 16:21:19,929 | INFO     | [monitor] control thread has ended
[2024-05-21 12:21:24] 2024-05-21 16:21:24,269 | INFO     | all workflow threads have been joined
[2024-05-21 12:21:24] 2024-05-21 16:21:24,269 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-21 12:21:24] 2024-05-21 16:21:24,269 | INFO     | traces error code: 0
[2024-05-21 12:21:24] 2024-05-21 16:21:24,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-21 12:21:24] 2024-05-21 16:21:24,357 [wrapper] ==== pilot stdout END ====
[2024-05-21 12:21:24] 2024-05-21 16:21:24,359 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-21 12:21:24] 2024-05-21 16:21:24,361 [wrapper] pilotpid: 3213800
[2024-05-21 12:21:24] 2024-05-21 16:21:24,363 [wrapper] Pilot exit status: 0
[2024-05-21 12:21:24] 2024-05-21 16:21:24,374 [wrapper] pandaids: 6209106980
[2024-05-21 12:21:24] 2024-05-21 16:21:24,427 [wrapper] cleanup: SIGTERM to supervisor_pilot 3539697 3213801
[2024-05-21 12:21:24] 2024-05-21 16:21:24,429 [wrapper] Test setup, not cleaning
[2024-05-21 12:21:24] 2024-05-21 16:21:24,432 [wrapper] ==== wrapper stdout END ====
[2024-05-21 12:21:24] 2024-05-21 16:21:24,433 [wrapper] ==== wrapper stderr END ====
[2024-05-21 12:21:24] 2024-05-21 16:21:24,437 [wrapper] apfmon messages muted
[2024-05-21 12:21:24]  *** Error codes and diagnostics ***
[2024-05-21 12:21:24]     "exeErrorCode": 0,
[2024-05-21 12:21:24]     "exeErrorDiag": "",
[2024-05-21 12:21:24]     "pilotErrorCode": 0,
[2024-05-21 12:21:24]     "pilotErrorDiag": "",
[2024-05-21 12:21:24]  *** Listing of results directory ***
[2024-05-21 12:21:24] total 869452
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc    467845 May 18 12:04 pilot3.tar.gz
[2024-05-21 12:21:24] -rwx------ 1 boinc boinc     32251 May 18 12:18 runpilot2-wrapper.sh
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc      5633 May 18 12:18 queuedata.json
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc       100 May 21 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-21 12:21:24] -rwxr-xr-x 1 boinc boinc      7986 May 21 10:23 run_atlas
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc       105 May 21 10:23 job.xml
[2024-05-21 12:21:24] -rw-r--r-- 2 boinc boinc 612579784 May 21 10:23 EVNT.38776140._000342.pool.root.1
[2024-05-21 12:21:24] -rw-r--r-- 2 boinc boinc     17537 May 21 10:23 start_atlas.sh
[2024-05-21 12:21:24] drwxrwx--x 2 boinc boinc      4096 May 21 10:23 shared
[2024-05-21 12:21:24] -rw-r--r-- 2 boinc boinc    479997 May 21 10:23 input.tar.gz
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc      7599 May 21 10:23 init_data.xml
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc         0 May 21 10:23 boinc_lockfile
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc      2615 May 21 10:23 pandaJob.out
[2024-05-21 12:21:24] -rw------- 1 boinc boinc       460 May 21 10:23 setup.sh.local
[2024-05-21 12:21:24] -rw------- 1 boinc boinc   1013512 May 21 10:23 agis_schedconf.cvmfs.json
[2024-05-21 12:21:24] -rw------- 1 boinc boinc         0 May 21 10:23 agis_ddmendpoints.agis.ALL.json
[2024-05-21 12:21:24] -rw------- 1 boinc boinc   1324700 May 21 10:23 cric_ddmendpoints.json
[2024-05-21 12:21:24] drwx------ 4 boinc boinc      4096 May 21 10:23 pilot3
[2024-05-21 12:21:24] -rw------- 1 boinc boinc 271990438 May 21 12:20 HITS.38776146._016681.pool.root.1
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc       530 May 21 12:20 boinc_task_state.xml
[2024-05-21 12:21:24] -rw------- 1 boinc boinc        95 May 21 12:20 pilot_heartbeat.json
[2024-05-21 12:21:24] -rw------- 1 boinc boinc      1028 May 21 12:20 memory_monitor_summary.json
[2024-05-21 12:21:24] -rw------- 1 boinc boinc    397605 May 21 12:20 log.38776146._016681.job.log.tgz.1
[2024-05-21 12:21:24] -rw------- 1 boinc boinc      7689 May 21 12:21 heartbeat.json
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc      8192 May 21 12:21 boinc_mmap_file
[2024-05-21 12:21:24] -rw------- 1 boinc boinc      4415 May 21 12:21 pilotlog.txt
[2024-05-21 12:21:24] -rw------- 1 boinc boinc    714129 May 21 12:21 log.38776146._016681.job.log.1
[2024-05-21 12:21:24] -rw------- 1 boinc boinc       357 May 21 12:21 output.list
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc       620 May 21 12:21 runtime_log
[2024-05-21 12:21:24] -rw------- 1 boinc boinc   1126400 May 21 12:21 result.tar.gz
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc     11477 May 21 12:21 runtime_log.err
[2024-05-21 12:21:24] -rw------- 1 boinc boinc       639 May 21 12:21 qASKDm3wbS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmDrSKDmgafVun.diag
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc        27 May 21 12:21 wrapper_checkpoint.txt
[2024-05-21 12:21:24] -rw-r--r-- 1 boinc boinc     21265 May 21 12:21 stderr.txt
[2024-05-21 12:21:24] HITS file was successfully produced:
[2024-05-21 12:21:24] -rw------- 1 boinc boinc 271990438 May 21 12:20 shared/HITS.pool.root.1
[2024-05-21 12:21:24]  *** Contents of shared directory: ***
[2024-05-21 12:21:24] total 865440
[2024-05-21 12:21:24] -rw-r--r-- 2 boinc boinc 612579784 May 21 10:23 ATLAS.root_0
[2024-05-21 12:21:24] -rw-r--r-- 2 boinc boinc     17537 May 21 10:23 start_atlas.sh
[2024-05-21 12:21:24] -rw-r--r-- 2 boinc boinc    479997 May 21 10:23 input.tar.gz
[2024-05-21 12:21:24] -rw------- 1 boinc boinc 271990438 May 21 12:20 HITS.pool.root.1
[2024-05-21 12:21:24] -rw------- 1 boinc boinc   1126400 May 21 12:21 result.tar.gz
12:21:26 (3204659): run_atlas exited; CPU time 68108.857822
12:21:26 (3204659): called boinc_finish(0)

</stderr_txt>
]]>

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