Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:55 (2300382): wrapper (7.7.26015): starting
23:27:55 (2300382): wrapper: running run_atlas (--nthreads 4)
[2024-05-20 23:27:55] Arguments: --nthreads 4
[2024-05-20 23:27:55] Threads: 4
[2024-05-20 23:27:55] Checking for CVMFS
[2024-05-20 23:27:55] No cvmfs_config command found, will try listing directly
[2024-05-20 23:27:55] CVMFS is ok
[2024-05-20 23:27:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 23:27:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 23:27:55] Further information can be found at the LHC@home message board.
[2024-05-20 23:27:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 23:27:55] Checking for apptainer binary...
[2024-05-20 23:27:55] which: no apptainer in ((null))
[2024-05-20 23:27:55] apptainer is not installed, using version from CVMFS
[2024-05-20 23:27:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 23:27:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2024-05-20 23:27:56] apptainer works
[2024-05-20 23:27:56] Set ATHENA_PROC_NUMBER=4
[2024-05-20 23:27:56] Set ATHENA_CORE_NUMBER=4
[2024-05-20 23:27:56] Starting ATLAS job with PandaID=6209103213
[2024-05-20 23:27:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-21 11:32:46]  *** The last 200 lines of the pilot log: ***
[2024-05-21 11:32:46] 2024-05-21 09:32:24,660 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-21 11:32:46] 2024-05-21 09:32:26,926 | INFO     | job 6209103213 has state=finished
[2024-05-21 11:32:46] 2024-05-21 09:32:26,926 | INFO     | preparing for final server update for job 6209103213 in state='finished'
[2024-05-21 11:32:46] 2024-05-21 09:32:26,927 | INFO     | this job has now completed (state=finished)
[2024-05-21 11:32:46] 2024-05-21 09:32:26,927 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-21 11:32:46] 2024-05-21 09:32:26,927 | INFO     | job 6209103213 has finished - writing final server update
[2024-05-21 11:32:46] 2024-05-21 09:32:26,927 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4167535/.job.ad'
[2024-05-21 11:32:46] 2024-05-21 09:32:26,927 | INFO     | total number of processed events: 1950 (read)
[2024-05-21 11:32:46] 2024-05-21 09:32:26,934 | INFO     | executing command: lscpu
[2024-05-21 11:32:46] 2024-05-21 09:32:26,974 | INFO     | found 64 cores (32 cores per socket, 2 sockets)
[2024-05-21 11:32:46] 2024-05-21 09:32:26,974 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-21 11:32:46] 2024-05-21 09:32:27,013 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-21 11:32:46] 2024-05-21 09:32:27,162 | INFO     | monitor loop #3301: job 0:6209103213 is in state 'finished'
[2024-05-21 11:32:46] 2024-05-21 09:32:27,163 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-21 11:32:46] 2024-05-21 09:32:29,666 | INFO     | monitor loop #3302: job 0:6209103213 is in state 'finished'
[2024-05-21 11:32:46] 2024-05-21 09:32:29,666 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-21 11:32:46] 2024-05-21 09:32:30,242 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-21 11:32:46] 2024-05-21 09:32:30,243 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6209103213/memory_monitor_summary.json (trf name=prmon)
[2024-05-21 11:32:46] 2024-05-21 09:32:30,244 | INFO     | extracted standard info from prmon json
[2024-05-21 11:32:46] 2024-05-21 09:32:30,244 | INFO     | extracted standard memory fields from prmon json
[2024-05-21 11:32:46] 2024-05-21 09:32:30,244 | WARNING  | GPU info not found in prmon json
[2024-05-21 11:32:46] 2024-05-21 09:32:30,253 | INFO     | fitting pss+swap vs Time
[2024-05-21 11:32:46] 2024-05-21 09:32:30,254 | INFO     | model: linear, x: [1716240515.0, 1716240576.0, 1716240637.0, 1716240698.0, 1716240759.0, 1716240820.0, 1716240881.0, 1716240942.0, 1716241003.0, 1716241064.0, 1716
[2024-05-21 11:32:46] 2024-05-21 09:32:30,254 | INFO     | sum of square deviations: 111922537578.0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,263 | INFO     | sum of deviations: 985719215034.0002
[2024-05-21 11:32:46] 2024-05-21 09:32:30,263 | INFO     | mean x: 1716262200.5
[2024-05-21 11:32:46] 2024-05-21 09:32:30,263 | INFO     | mean y: 2610539.8061797754
[2024-05-21 11:32:46] 2024-05-21 09:32:30,263 | INFO     | -- intersect: -15112777885.785812
[2024-05-21 11:32:46] 2024-05-21 09:32:30,263 | INFO     | intersect: -15112777885.785812
[2024-05-21 11:32:46] 2024-05-21 09:32:30,264 | INFO     | chi2: 12.913257609610614
[2024-05-21 11:32:46] 2024-05-21 09:32:30,264 | INFO     | model: linear, x: [1716240515.0, 1716240576.0, 1716240637.0, 1716240698.0, 1716240759.0, 1716240820.0, 1716240881.0, 1716240942.0, 1716241003.0, 1716241064.0, 1716
[2024-05-21 11:32:46] 2024-05-21 09:32:30,264 | INFO     | sum of square deviations: 109581135538.0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,269 | INFO     | sum of deviations: 1189667335261.0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,269 | INFO     | mean x: 1716262048.0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,269 | INFO     | mean y: 2623825.6534653464
[2024-05-21 11:32:46] 2024-05-21 09:32:30,269 | INFO     | -- intersect: -18629970983.931328
[2024-05-21 11:32:46] 2024-05-21 09:32:30,270 | INFO     | intersect: -18629970983.931328
[2024-05-21 11:32:46] 2024-05-21 09:32:30,270 | INFO     | chi2: 10.203989085885274
[2024-05-21 11:32:46] 2024-05-21 09:32:30,270 | INFO     | current chi2=10.203989085885274 (change=20.980519444675085 %)
[2024-05-21 11:32:46] 2024-05-21 09:32:30,270 | INFO     | right removable region: 706
[2024-05-21 11:32:46] 2024-05-21 09:32:30,270 | INFO     | model: linear, x: [1716240820.0, 1716240881.0, 1716240942.0, 1716241003.0, 1716241064.0, 1716241125.0, 1716241186.0, 1716241247.0, 1716241308.0, 1716241369.0, 1716
[2024-05-21 11:32:46] 2024-05-21 09:32:30,271 | INFO     | sum of square deviations: 109581135538.0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,275 | INFO     | sum of deviations: 774614384243.0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,276 | INFO     | mean x: 1716262353.0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,276 | INFO     | mean y: 2624281.7326732674
[2024-05-21 11:32:46] 2024-05-21 09:32:30,276 | INFO     | -- intersect: -12129404641.325167
[2024-05-21 11:32:46] 2024-05-21 09:32:30,276 | INFO     | intersect: -12129404641.325167
[2024-05-21 11:32:46] 2024-05-21 09:32:30,276 | INFO     | chi2: 9.979876516658448
[2024-05-21 11:32:46] 2024-05-21 09:32:30,276 | INFO     | current chi2=9.979876516658448 (change=22.716042548156203 %)
[2024-05-21 11:32:46] 2024-05-21 09:32:30,276 | INFO     | left removable region: 10
[2024-05-21 11:32:46] 2024-05-21 09:32:30,276 | INFO     | model: linear, x: [1716241125.0, 1716241186.0, 1716241247.0, 1716241308.0, 1716241369.0, 1716241430.0, 1716241491.0, 1716241552.0, 1716241613.0, 1716241674.0, 1716
[2024-05-21 11:32:46] 2024-05-21 09:32:30,277 | INFO     | sum of square deviations: 104545476470.0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,282 | INFO     | sum of deviations: 852109985912.5001
[2024-05-21 11:32:46] 2024-05-21 09:32:30,282 | INFO     | mean x: 1716262322.5
[2024-05-21 11:32:46] 2024-05-21 09:32:30,282 | INFO     | mean y: 2652780.797413793
[2024-05-21 11:32:46] 2024-05-21 09:32:30,282 | INFO     | -- intersect: -13985941588.154434
[2024-05-21 11:32:46] 2024-05-21 09:32:30,282 | INFO     | intersect: -13985941588.154434
[2024-05-21 11:32:46] 2024-05-21 09:32:30,282 | INFO     | chi2: 4.602820010294064
[2024-05-21 11:32:46] 2024-05-21 09:32:30,282 | INFO     | -- intersect: -13985941588.154434
[2024-05-21 11:32:46] 2024-05-21 09:32:30,282 | INFO     | current memory leak: 8.15 B/s (using 696 data points, chi2=4.60)
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | ..............................
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | . Timing measurements:
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | . get job = 0 s
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | . initial setup = 1 s
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | . payload setup = 9 s
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | . stage-in = 0 s
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | . payload execution = 43428 s
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | . stage-out = 1 s
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | . log creation = 0 s
[2024-05-21 11:32:46] 2024-05-21 09:32:30,283 | INFO     | ..............................
[2024-05-21 11:32:46] 2024-05-21 09:32:30,336 | INFO     | 
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | job summary report
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | --------------------------------------------------
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | PanDA job id: 6209103213
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | task id: 38734053
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | errors: (none)
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | pilot state: finished 
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | transexitcode: 0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | exeerrorcode: 0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | exeerrordiag: 
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | exitcode: 0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | exitmsg: OK
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | cpuconsumptiontime: 167693 s
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | nevents: 1950
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | neventsw: 0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,337 | INFO     | pid: 2317956
[2024-05-21 11:32:46] 2024-05-21 09:32:30,338 | INFO     | pgrp: 2317956
[2024-05-21 11:32:46] 2024-05-21 09:32:30,338 | INFO     | corecount: 4
[2024-05-21 11:32:46] 2024-05-21 09:32:30,338 | INFO     | event service: False
[2024-05-21 11:32:46] 2024-05-21 09:32:30,338 | INFO     | sizes: {0: 2392601, 4: 2392807, 11: 2392835, 43441: 2456756, 43443: 2465796, 43449: 2465962}
[2024-05-21 11:32:46] 2024-05-21 09:32:30,338 | INFO     | --------------------------------------------------
[2024-05-21 11:32:46] 2024-05-21 09:32:30,338 | INFO     | 
[2024-05-21 11:32:46] 2024-05-21 09:32:30,338 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2024-05-21 11:32:46] 2024-05-21 09:32:30,356 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,356 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,356 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,356 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-21 11:32:46] 2024-05-21 09:32:30,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,358 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-21 11:32:46] 2024-05-21 09:32:30,358 | INFO     | job 6209103213 has completed (purged errors)
[2024-05-21 11:32:46] 2024-05-21 09:32:30,358 | INFO     | overall cleanup function is called
[2024-05-21 11:32:46] 2024-05-21 09:32:31,378 | INFO     | --- collectZombieJob: --- 10, [2317956]
[2024-05-21 11:32:46] 2024-05-21 09:32:31,378 | INFO     | zombie collector waiting for pid 2317956
[2024-05-21 11:32:46] 2024-05-21 09:32:31,378 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-21 11:32:46] 2024-05-21 09:32:32,384 | INFO     | collected zombie processes
[2024-05-21 11:32:46] 2024-05-21 09:32:32,384 | INFO     | will now attempt to kill all subprocesses of pid=2317956
[2024-05-21 11:32:46] 2024-05-21 09:32:32,580 | INFO     | process IDs to be killed: [2317956] (in reverse order)
[2024-05-21 11:32:46] 2024-05-21 09:32:32,721 | WARNING  | found no corresponding commands to process id(s)
[2024-05-21 11:32:46] 2024-05-21 09:32:32,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-21 11:32:46] 2024-05-21 09:32:32,736 | INFO     | did not find any defunct processes belonging to 2317956
[2024-05-21 11:32:46] 2024-05-21 09:32:32,745 | INFO     | did not find any defunct processes belonging to 2317956
[2024-05-21 11:32:46] 2024-05-21 09:32:32,745 | INFO     | ready for new job
[2024-05-21 11:32:46] 2024-05-21 09:32:32,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-21 11:32:46] 2024-05-21 09:32:32,748 | INFO     | *************************************
[2024-05-21 11:32:46] 2024-05-21 09:32:32,748 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-21 11:32:46] 2024-05-21 09:32:32,748 | INFO     | *************************************
[2024-05-21 11:32:46] 2024-05-21 09:32:32,748 | INFO     | 
[2024-05-21 11:32:46] 2024-05-21 09:32:32,753 | INFO     | architecture information:
[2024-05-21 11:32:46] 2024-05-21 09:32:32,753 | INFO     | executing command: cat /etc/os-release
[2024-05-21 11:32:46] 2024-05-21 09:32:32,766 | INFO     | cat /etc/os-release:
[2024-05-21 11:32:46] NAME="CentOS Linux"
[2024-05-21 11:32:46] VERSION="7 (Core)"
[2024-05-21 11:32:46] ID="centos"
[2024-05-21 11:32:46] ID_LIKE="rhel fedora"
[2024-05-21 11:32:46] VERSION_ID="7"
[2024-05-21 11:32:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-21 11:32:46] ANSI_COLOR="0;31"
[2024-05-21 11:32:46] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-21 11:32:46] HOME_URL="https://www.centos.org/"
[2024-05-21 11:32:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-21 11:32:46] 
[2024-05-21 11:32:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-21 11:32:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-21 11:32:46] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-21 11:32:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-21 11:32:46] 
[2024-05-21 11:32:46] 2024-05-21 09:32:32,767 | INFO     | *************************************
[2024-05-21 11:32:46] 2024-05-21 09:32:33,270 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2024-05-21 11:32:46] 2024-05-21 09:32:33,288 | INFO     | sufficient remaining disk space (2995563528192 B)
[2024-05-21 11:32:46] 2024-05-21 09:32:33,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-21 11:32:46] 2024-05-21 09:32:33,288 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-21 11:32:46] 2024-05-21 09:32:33,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-21 11:32:46] 2024-05-21 09:32:33,289 | INFO     | aborting loop
[2024-05-21 11:32:46] 2024-05-21 09:32:33,430 | INFO     | found 0 job(s) in 20 queues
[2024-05-21 11:32:46] 2024-05-21 09:32:33,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-21 11:32:46] 2024-05-21 09:32:33,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-21 11:32:46] 2024-05-21 09:32:34,160 | INFO     | all data control threads have been joined
[2024-05-21 11:32:46] 2024-05-21 09:32:34,171 | INFO     | all job control threads have been joined
[2024-05-21 11:32:46] 2024-05-21 09:32:34,293 | INFO     | [job] retrieve thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:34,294 | INFO     | [job] job monitor thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:34,319 | INFO     | all payload control threads have been joined
[2024-05-21 11:32:46] 2024-05-21 09:32:34,361 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:34,379 | INFO     | [payload] validate_post thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:34,424 | INFO     | [payload] validate_pre thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:34,674 | INFO     | [job] validate thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:34,753 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-21 11:32:46] 2024-05-21 09:32:34,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-21 11:32:46] 2024-05-21 09:32:34,940 | INFO     | [payload] execute_payloads thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:35,162 | INFO     | [job] create_data_payload thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:35,166 | INFO     | [data] control thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:35,177 | INFO     | [job] control thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:35,324 | INFO     | [payload] control thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:35,347 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-21 11:32:46] 2024-05-21 09:32:35,379 | INFO     | [payload] failed_post thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:35,681 | INFO     | [data] copytool_in thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:36,352 | INFO     | [job] queue monitor thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:36,758 | INFO     | [data] copytool_out thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:38,857 | INFO     | [data] queue_monitor thread has finished
[2024-05-21 11:32:46] 2024-05-21 09:32:40,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 48001170043968)>', '<ExcThread(monitor, started 48001345496832)>']
[2024-05-21 11:32:46] 2024-05-21 09:32:41,469 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-21 11:32:46] 2024-05-21 09:32:41,470 | INFO     | [monitor] control thread has ended
[2024-05-21 11:32:46] 2024-05-21 09:32:45,518 | INFO     | all workflow threads have been joined
[2024-05-21 11:32:46] 2024-05-21 09:32:45,518 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-21 11:32:46] 2024-05-21 09:32:45,519 | INFO     | traces error code: 0
[2024-05-21 11:32:46] 2024-05-21 09:32:45,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-21 11:32:46] 2024-05-21 09:32:45,596 [wrapper] ==== pilot stdout END ====
[2024-05-21 11:32:46] 2024-05-21 09:32:45,599 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-21 11:32:46] 2024-05-21 09:32:45,600 [wrapper] pilotpid: 2305031
[2024-05-21 11:32:46] 2024-05-21 09:32:45,602 [wrapper] Pilot exit status: 0
[2024-05-21 11:32:46] 2024-05-21 09:32:45,611 [wrapper] pandaids: 6209103213
[2024-05-21 11:32:46] 2024-05-21 09:32:45,702 [wrapper] cleanup: SIGTERM to supervisor_pilot 1399033 2305032
[2024-05-21 11:32:46] 2024-05-21 09:32:45,704 [wrapper] Test setup, not cleaning
[2024-05-21 11:32:46] 2024-05-21 09:32:45,706 [wrapper] ==== wrapper stdout END ====
[2024-05-21 11:32:46] 2024-05-21 09:32:45,708 [wrapper] ==== wrapper stderr END ====
[2024-05-21 11:32:46] 2024-05-21 09:32:45,711 [wrapper] apfmon messages muted
[2024-05-21 11:32:46]  *** Error codes and diagnostics ***
[2024-05-21 11:32:46]     "exeErrorCode": 0,
[2024-05-21 11:32:46]     "exeErrorDiag": "",
[2024-05-21 11:32:46]     "pilotErrorCode": 0,
[2024-05-21 11:32:46]     "pilotErrorDiag": "",
[2024-05-21 11:32:46]  *** Listing of results directory ***
[2024-05-21 11:32:46] total 1498868
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc       5633 May 18 17:47 queuedata.json
[2024-05-21 11:32:46] -rwx------ 1 boinc boinc      32251 May 18 17:48 runpilot2-wrapper.sh
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc     467845 May 18 17:48 pilot3.tar.gz
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc        100 May 20 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-21 11:32:46] -rwxr-xr-x 1 boinc boinc       7986 May 20 23:27 run_atlas
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc        105 May 20 23:27 job.xml
[2024-05-21 11:32:46] -rw-r--r-- 2 boinc boinc  326231058 May 20 23:27 EVNT.38734051._000543.pool.root.1
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc       6646 May 20 23:27 init_data.xml
[2024-05-21 11:32:46] -rw-r--r-- 2 boinc boinc      17537 May 20 23:27 start_atlas.sh
[2024-05-21 11:32:46] drwxrwx--x 2 boinc boinc       4096 May 20 23:27 shared
[2024-05-21 11:32:46] -rw-r--r-- 2 boinc boinc     480164 May 20 23:27 input.tar.gz
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc          0 May 20 23:27 boinc_lockfile
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc       2852 May 20 23:27 pandaJob.out
[2024-05-21 11:32:46] -rw------- 1 boinc boinc        424 May 20 23:27 setup.sh.local
[2024-05-21 11:32:46] -rw------- 1 boinc boinc    1014363 May 20 23:28 agis_schedconf.cvmfs.json
[2024-05-21 11:32:46] -rw------- 1 boinc boinc    1324701 May 20 23:28 cric_ddmendpoints.json
[2024-05-21 11:32:46] drwx------ 4 boinc boinc       4096 May 20 23:28 pilot3
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc        533 May 21 11:25 boinc_task_state.xml
[2024-05-21 11:32:46] -rw------- 1 boinc boinc 1189882677 May 21 11:31 HITS.38734053._008825.pool.root.1
[2024-05-21 11:32:46] -rw------- 1 boinc boinc         95 May 21 11:32 pilot_heartbeat.json
[2024-05-21 11:32:46] -rw------- 1 boinc boinc       1053 May 21 11:32 memory_monitor_summary.json
[2024-05-21 11:32:46] -rw------- 1 boinc boinc          0 May 21 11:32 agis_ddmendpoints.agis.ALL.json
[2024-05-21 11:32:46] -rw------- 1 boinc boinc    1638471 May 21 11:32 log.38734053._008825.job.log.tgz.1
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc       8192 May 21 11:32 boinc_mmap_file
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc         29 May 21 11:32 wrapper_checkpoint.txt
[2024-05-21 11:32:46] -rw------- 1 boinc boinc      27535 May 21 11:32 heartbeat.json
[2024-05-21 11:32:46] -rw------- 1 boinc boinc       4223 May 21 11:32 pilotlog.txt
[2024-05-21 11:32:46] -rw------- 1 boinc boinc    5937338 May 21 11:32 log.38734053._008825.job.log.1
[2024-05-21 11:32:46] -rw------- 1 boinc boinc        353 May 21 11:32 output.list
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc        620 May 21 11:32 runtime_log
[2024-05-21 11:32:46] -rw------- 1 boinc boinc    7618560 May 21 11:32 result.tar.gz
[2024-05-21 11:32:46] -rw------- 1 boinc boinc        665 May 21 11:32 ue7MDm1TbS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmCpSKDmtE1bFn.diag
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc      11429 May 21 11:32 runtime_log.err
[2024-05-21 11:32:46] -rw-r--r-- 1 boinc boinc      21683 May 21 11:32 stderr.txt
[2024-05-21 11:32:46] HITS file was successfully produced:
[2024-05-21 11:32:46] -rw------- 1 boinc boinc 1189882677 May 21 11:31 shared/HITS.pool.root.1
[2024-05-21 11:32:46]  *** Contents of shared directory: ***
[2024-05-21 11:32:46] total 1488524
[2024-05-21 11:32:46] -rw-r--r-- 2 boinc boinc  326231058 May 20 23:27 ATLAS.root_0
[2024-05-21 11:32:46] -rw-r--r-- 2 boinc boinc      17537 May 20 23:27 start_atlas.sh
[2024-05-21 11:32:46] -rw-r--r-- 2 boinc boinc     480164 May 20 23:27 input.tar.gz
[2024-05-21 11:32:46] -rw------- 1 boinc boinc 1189882677 May 21 11:31 HITS.pool.root.1
[2024-05-21 11:32:46] -rw------- 1 boinc boinc    7618560 May 21 11:32 result.tar.gz
11:32:47 (2300382): run_atlas exited; CPU time 166118.215260
11:32:47 (2300382): called boinc_finish(0)

</stderr_txt>
]]>

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