Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:08:41 (154595): wrapper (7.7.26015): starting
17:08:41 (154595): wrapper: running run_atlas (--nthreads 8)
[2024-05-18 17:08:41] Arguments: --nthreads 8
[2024-05-18 17:08:41] Threads: 8
[2024-05-18 17:08:41] Checking for CVMFS
[2024-05-18 17:08:41] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 17:08:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 17:08:42] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 17:08:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 17:08:43] 2.11.2.0 184706 7354 142952 132889 1 515 15590477 18432001 18267 130560 0 43159757 99.090 70657240 35904 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2024-05-18 17:08:43] CVMFS is ok
[2024-05-18 17:08:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 17:08:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 17:08:43] Further information can be found at the LHC@home message board.
[2024-05-18 17:08:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 17:08:43] Checking for apptainer binary...
[2024-05-18 17:08:43] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 17:08:43] Running /usr/bin/apptainer --version
[2024-05-18 17:08:43] apptainer version 1.3.0-1.el7
[2024-05-18 17:08:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 17:08:50] c6-12-27-2.aglt2.org
[2024-05-18 17:08:50] apptainer works
[2024-05-18 17:08:50] Set ATHENA_PROC_NUMBER=8
[2024-05-18 17:08:50] Set ATHENA_CORE_NUMBER=8
[2024-05-18 17:08:51] Starting ATLAS job with PandaID=6209088278
[2024-05-18 17:08:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 11:17:45]  *** The last 200 lines of the pilot log: ***
[2024-05-19 11:17:45] 2024-05-19 15:17:12,222 | INFO     | monitor loop #4242: job 0:6209088278 is in state 'finished'
[2024-05-19 11:17:45] 2024-05-19 15:17:12,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 11:17:45] 2024-05-19 15:17:14,726 | INFO     | monitor loop #4243: job 0:6209088278 is in state 'finished'
[2024-05-19 11:17:45] 2024-05-19 15:17:14,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 11:17:45] 2024-05-19 15:17:17,230 | INFO     | monitor loop #4244: job 0:6209088278 is in state 'finished'
[2024-05-19 11:17:45] 2024-05-19 15:17:17,230 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 11:17:45] 2024-05-19 15:17:19,737 | INFO     | monitor loop #4245: job 0:6209088278 is in state 'finished'
[2024-05-19 11:17:45] 2024-05-19 15:17:19,737 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 11:17:45] 2024-05-19 15:17:22,263 | INFO     | monitor loop #4246: job 0:6209088278 is in state 'finished'
[2024-05-19 11:17:45] 2024-05-19 15:17:22,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 11:17:45] 2024-05-19 15:17:24,771 | INFO     | monitor loop #4247: job 0:6209088278 is in state 'finished'
[2024-05-19 11:17:45] 2024-05-19 15:17:24,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 11:17:45] 2024-05-19 15:17:26,118 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 11:17:45] 2024-05-19 15:17:26,118 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6209088278/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 11:17:45] 2024-05-19 15:17:26,119 | INFO     | extracted standard info from prmon json
[2024-05-19 11:17:45] 2024-05-19 15:17:26,119 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 11:17:45] 2024-05-19 15:17:26,119 | WARNING  | GPU info not found in prmon json
[2024-05-19 11:17:45] 2024-05-19 15:17:26,119 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 11:17:45] 2024-05-19 15:17:26,119 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 11:17:45] 2024-05-19 15:17:26,137 | INFO     | fitting pss+swap vs Time
[2024-05-19 11:17:45] 2024-05-19 15:17:26,138 | INFO     | model: linear, x: [1716066855.0, 1716066916.0, 1716066977.0, 1716067038.0, 1716067099.0, 1716067160.0, 1716067221.0, 1716067282.0, 1716067343.0, 1716067404.0, 1716
[2024-05-19 11:17:45] 2024-05-19 15:17:26,139 | INFO     | sum of square deviations: 374564245578.154
[2024-05-19 11:17:45] 2024-05-19 15:17:26,164 | INFO     | sum of deviations: 2683451572585.0273
[2024-05-19 11:17:45] 2024-05-19 15:17:26,165 | INFO     | mean x: 1716099307.1934273
[2024-05-19 11:17:45] 2024-05-19 15:17:26,165 | INFO     | mean y: 2472064.490140845
[2024-05-19 11:17:45] 2024-05-19 15:17:26,165 | INFO     | -- intersect: -12291999281.786333
[2024-05-19 11:17:45] 2024-05-19 15:17:26,165 | INFO     | intersect: -12291999281.786333
[2024-05-19 11:17:45] 2024-05-19 15:17:26,166 | INFO     | chi2: 21.055302241483908
[2024-05-19 11:17:45] 2024-05-19 15:17:26,167 | INFO     | model: linear, x: [1716066855.0, 1716066916.0, 1716066977.0, 1716067038.0, 1716067099.0, 1716067160.0, 1716067221.0, 1716067282.0, 1716067343.0, 1716067404.0, 1716
[2024-05-19 11:17:45] 2024-05-19 15:17:26,168 | INFO     | sum of square deviations: 369313475072.96606
[2024-05-19 11:17:45] 2024-05-19 15:17:26,193 | INFO     | sum of deviations: 2818778700005.781
[2024-05-19 11:17:45] 2024-05-19 15:17:26,194 | INFO     | mean x: 1716099154.6943395
[2024-05-19 11:17:45] 2024-05-19 15:17:26,194 | INFO     | mean y: 2475982.496226415
[2024-05-19 11:17:45] 2024-05-19 15:17:26,194 | INFO     | -- intersect: -13095621083.673948
[2024-05-19 11:17:45] 2024-05-19 15:17:26,194 | INFO     | intersect: -13095621083.673948
[2024-05-19 11:17:45] 2024-05-19 15:17:26,195 | INFO     | chi2: 19.477520301279164
[2024-05-19 11:17:45] 2024-05-19 15:17:26,195 | INFO     | current chi2=19.477520301279164 (change=7.4935136152837645 %)
[2024-05-19 11:17:45] 2024-05-19 15:17:26,195 | INFO     | right removable region: 1059
[2024-05-19 11:17:45] 2024-05-19 15:17:26,196 | INFO     | model: linear, x: [1716067160.0, 1716067221.0, 1716067282.0, 1716067343.0, 1716067404.0, 1716067465.0, 1716067526.0, 1716067588.0, 1716067649.0, 1716067709.0, 1716
[2024-05-19 11:17:45] 2024-05-19 15:17:26,197 | INFO     | sum of square deviations: 369313349412.9663
[2024-05-19 11:17:45] 2024-05-19 15:17:26,223 | INFO     | sum of deviations: 2316170342955.2837
[2024-05-19 11:17:45] 2024-05-19 15:17:26,223 | INFO     | mean x: 1716099459.6943395
[2024-05-19 11:17:45] 2024-05-19 15:17:26,223 | INFO     | mean y: 2482729.547169811
[2024-05-19 11:17:45] 2024-05-19 15:17:26,223 | INFO     | -- intersect: -10760135736.380571
[2024-05-19 11:17:45] 2024-05-19 15:17:26,223 | INFO     | intersect: -10760135736.380571
[2024-05-19 11:17:45] 2024-05-19 15:17:26,224 | INFO     | chi2: 16.5022155455898
[2024-05-19 11:17:45] 2024-05-19 15:17:26,225 | INFO     | current chi2=16.5022155455898 (change=21.624418608076095 %)
[2024-05-19 11:17:45] 2024-05-19 15:17:26,225 | INFO     | left removable region: 10
[2024-05-19 11:17:45] 2024-05-19 15:17:26,226 | INFO     | model: linear, x: [1716067465.0, 1716067526.0, 1716067588.0, 1716067649.0, 1716067709.0, 1716067770.0, 1716067831.0, 1716067892.0, 1716067953.0, 1716068014.0, 1716
[2024-05-19 11:17:45] 2024-05-19 15:17:26,226 | INFO     | sum of square deviations: 357934748633.5462
[2024-05-19 11:17:45] 2024-05-19 15:17:26,252 | INFO     | sum of deviations: 2164047877002.1274
[2024-05-19 11:17:45] 2024-05-19 15:17:26,252 | INFO     | mean x: 1716099429.1963775
[2024-05-19 11:17:45] 2024-05-19 15:17:26,252 | INFO     | mean y: 2495109.664442326
[2024-05-19 11:17:45] 2024-05-19 15:17:26,252 | INFO     | -- intersect: -10372919237.935246
[2024-05-19 11:17:45] 2024-05-19 15:17:26,252 | INFO     | intersect: -10372919237.935246
[2024-05-19 11:17:45] 2024-05-19 15:17:26,253 | INFO     | chi2: 12.20980637818627
[2024-05-19 11:17:45] 2024-05-19 15:17:26,254 | INFO     | -- intersect: -10372919237.935246
[2024-05-19 11:17:45] 2024-05-19 15:17:26,254 | INFO     | current memory leak: 6.05 B/s (using 1049 data points, chi2=12.21)
[2024-05-19 11:17:45] 2024-05-19 15:17:26,255 | INFO     | ..............................
[2024-05-19 11:17:45] 2024-05-19 15:17:26,255 | INFO     | . Timing measurements:
[2024-05-19 11:17:45] 2024-05-19 15:17:26,255 | INFO     | . get job = 0 s
[2024-05-19 11:17:45] 2024-05-19 15:17:26,255 | INFO     | . initial setup = 2 s
[2024-05-19 11:17:45] 2024-05-19 15:17:26,256 | INFO     | . payload setup = 96 s
[2024-05-19 11:17:45] 2024-05-19 15:17:26,256 | INFO     | . stage-in = 0 s
[2024-05-19 11:17:45] 2024-05-19 15:17:26,256 | INFO     | . payload execution = 64983 s
[2024-05-19 11:17:45] 2024-05-19 15:17:26,256 | INFO     | . stage-out = 6 s
[2024-05-19 11:17:45] 2024-05-19 15:17:26,256 | INFO     | . log creation = 2 s
[2024-05-19 11:17:45] 2024-05-19 15:17:26,256 | INFO     | ..............................
[2024-05-19 11:17:45] 2024-05-19 15:17:26,351 | INFO     | 
[2024-05-19 11:17:45] 2024-05-19 15:17:26,351 | INFO     | job summary report
[2024-05-19 11:17:45] 2024-05-19 15:17:26,351 | INFO     | --------------------------------------------------
[2024-05-19 11:17:45] 2024-05-19 15:17:26,352 | INFO     | PanDA job id: 6209088278
[2024-05-19 11:17:45] 2024-05-19 15:17:26,352 | INFO     | task id: 38921007
[2024-05-19 11:17:45] 2024-05-19 15:17:26,352 | INFO     | errors: (none)
[2024-05-19 11:17:45] 2024-05-19 15:17:26,352 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 11:17:45] 2024-05-19 15:17:26,352 | INFO     | pilot state: finished 
[2024-05-19 11:17:45] 2024-05-19 15:17:26,358 | INFO     | transexitcode: 0
[2024-05-19 11:17:45] 2024-05-19 15:17:26,358 | INFO     | exeerrorcode: 0
[2024-05-19 11:17:45] 2024-05-19 15:17:26,358 | INFO     | exeerrordiag: 
[2024-05-19 11:17:45] 2024-05-19 15:17:26,358 | INFO     | exitcode: 0
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | exitmsg: OK
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | cpuconsumptiontime: 160460 s
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | nevents: 400
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | neventsw: 0
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | pid: 203772
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | pgrp: 203772
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | corecount: 8
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | event service: False
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | sizes: {0: 2392189, 1: 2392189, 11: 2392217, 22: 2392245, 33: 2392273, 44: 2392301, 45: 2392663, 54: 2392691, 65084: 2446107, 65091: 2455067, 65093: 2455123, 65152
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | --------------------------------------------------
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | 
[2024-05-19 11:17:45] 2024-05-19 15:17:26,359 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2024-05-19 11:17:45] 2024-05-19 15:17:26,722 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,722 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,722 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,722 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,724 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,724 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 11:17:45] 2024-05-19 15:17:26,724 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,724 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 11:17:45] 2024-05-19 15:17:26,724 | INFO     | job 6209088278 has completed (purged errors)
[2024-05-19 11:17:45] 2024-05-19 15:17:26,724 | INFO     | overall cleanup function is called
[2024-05-19 11:17:45] 2024-05-19 15:17:27,738 | INFO     | --- collectZombieJob: --- 10, [203772]
[2024-05-19 11:17:45] 2024-05-19 15:17:27,738 | INFO     | zombie collector waiting for pid 203772
[2024-05-19 11:17:45] 2024-05-19 15:17:27,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 11:17:45] 2024-05-19 15:17:28,743 | INFO     | collected zombie processes
[2024-05-19 11:17:45] 2024-05-19 15:17:28,743 | INFO     | will now attempt to kill all subprocesses of pid=203772
[2024-05-19 11:17:45] 2024-05-19 15:17:29,987 | INFO     | process IDs to be killed: [203772] (in reverse order)
[2024-05-19 11:17:45] 2024-05-19 15:17:31,190 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 11:17:45] 2024-05-19 15:17:31,191 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 11:17:45] 2024-05-19 15:17:31,247 | INFO     | did not find any defunct processes belonging to 203772
[2024-05-19 11:17:45] 2024-05-19 15:17:31,320 | INFO     | did not find any defunct processes belonging to 203772
[2024-05-19 11:17:45] 2024-05-19 15:17:31,320 | INFO     | ready for new job
[2024-05-19 11:17:45] 2024-05-19 15:17:31,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 11:17:45] 2024-05-19 15:17:31,329 | INFO     | *************************************
[2024-05-19 11:17:45] 2024-05-19 15:17:31,329 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 11:17:45] 2024-05-19 15:17:31,329 | INFO     | *************************************
[2024-05-19 11:17:45] 2024-05-19 15:17:31,329 | INFO     | 
[2024-05-19 11:17:45] 2024-05-19 15:17:31,353 | INFO     | architecture information:
[2024-05-19 11:17:45] 2024-05-19 15:17:31,361 | INFO     | executing command: cat /etc/os-release
[2024-05-19 11:17:45] 2024-05-19 15:17:31,493 | INFO     | cat /etc/os-release:
[2024-05-19 11:17:45] NAME="CentOS Linux"
[2024-05-19 11:17:45] VERSION="7 (Core)"
[2024-05-19 11:17:45] ID="centos"
[2024-05-19 11:17:45] ID_LIKE="rhel fedora"
[2024-05-19 11:17:45] VERSION_ID="7"
[2024-05-19 11:17:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 11:17:45] ANSI_COLOR="0;31"
[2024-05-19 11:17:45] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 11:17:45] HOME_URL="https://www.centos.org/"
[2024-05-19 11:17:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 11:17:45] 
[2024-05-19 11:17:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 11:17:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 11:17:45] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 11:17:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 11:17:45] 
[2024-05-19 11:17:45] 2024-05-19 15:17:31,494 | INFO     | *************************************
[2024-05-19 11:17:45] 2024-05-19 15:17:31,997 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2024-05-19 11:17:45] 2024-05-19 15:17:32,149 | INFO     | sufficient remaining disk space (99226746880 B)
[2024-05-19 11:17:45] 2024-05-19 15:17:32,149 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 11:17:45] 2024-05-19 15:17:32,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 11:17:45] 2024-05-19 15:17:32,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 11:17:45] 2024-05-19 15:17:32,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 11:17:45] 2024-05-19 15:17:32,192 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 11:17:45] 2024-05-19 15:17:32,260 | INFO     | all job control threads have been joined
[2024-05-19 11:17:45] 2024-05-19 15:17:32,310 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 11:17:45] 2024-05-19 15:17:32,310 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 11:17:45] 2024-05-19 15:17:32,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 11:17:45] 2024-05-19 15:17:32,311 | INFO     | will abort loop
[2024-05-19 11:17:45] 2024-05-19 15:17:32,463 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 11:17:45] 2024-05-19 15:17:32,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 11:17:45] 2024-05-19 15:17:32,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 11:17:45] 2024-05-19 15:17:32,469 | INFO     | all data control threads have been joined
[2024-05-19 11:17:45] 2024-05-19 15:17:33,155 | INFO     | [job] retrieve thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:33,159 | INFO     | [job] queue monitor thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:33,278 | INFO     | all payload control threads have been joined
[2024-05-19 11:17:45] 2024-05-19 15:17:33,279 | INFO     | [job] control thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:33,316 | INFO     | [job] job monitor thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:33,377 | INFO     | [data] copytool_in thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:33,378 | INFO     | [job] validate thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:33,475 | INFO     | [data] control thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:33,598 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:33,859 | INFO     | [payload] failed_post thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:33,872 | INFO     | [payload] validate_post thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:34,157 | INFO     | [data] copytool_out thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:34,284 | INFO     | [payload] control thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:34,299 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:34,303 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:34,539 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:36,201 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 11:17:45] 2024-05-19 15:17:36,786 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508271298368)>', '<ExcThread(monitor, started 140507665639168)>']
[2024-05-19 11:17:45] 2024-05-19 15:17:37,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 11:17:45] 2024-05-19 15:17:37,493 | INFO     | [monitor] control thread has ended
[2024-05-19 11:17:45] 2024-05-19 15:17:41,811 | INFO     | all workflow threads have been joined
[2024-05-19 11:17:45] 2024-05-19 15:17:41,811 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 11:17:45] 2024-05-19 15:17:41,812 | INFO     | traces error code: 0
[2024-05-19 11:17:45] 2024-05-19 15:17:41,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 11:17:45] 2024-05-19 15:17:42,020 [wrapper] ==== pilot stdout END ====
[2024-05-19 11:17:45] 2024-05-19 15:17:42,041 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 11:17:45] 2024-05-19 15:17:42,076 [wrapper] pilotpid: 167010
[2024-05-19 11:17:45] 2024-05-19 15:17:42,108 [wrapper] Pilot exit status: 0
[2024-05-19 11:17:45] 2024-05-19 15:17:42,252 [wrapper] pandaids: 6209088278
[2024-05-19 11:17:45] 2024-05-19 15:17:43,134 [wrapper] cleanup: SIGTERM to supervisor_pilot 189799 167011
[2024-05-19 11:17:45] 2024-05-19 15:17:43,176 [wrapper] Test setup, not cleaning
[2024-05-19 11:17:45] 2024-05-19 15:17:43,254 [wrapper] ==== wrapper stdout END ====
[2024-05-19 11:17:45] 2024-05-19 15:17:43,317 [wrapper] ==== wrapper stderr END ====
[2024-05-19 11:17:45] 2024-05-19 15:17:43,418 [wrapper] apfmon messages muted
[2024-05-19 11:17:45]  *** Error codes and diagnostics ***
[2024-05-19 11:17:45]     "exeErrorCode": 0,
[2024-05-19 11:17:45]     "exeErrorDiag": "",
[2024-05-19 11:17:45]     "pilotErrorCode": 0,
[2024-05-19 11:17:45]     "pilotErrorDiag": "",
[2024-05-19 11:17:45]  *** Listing of results directory ***
[2024-05-19 11:17:45] total 936276
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas    467845 May 18 11:23 pilot3.tar.gz
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas      5633 May 18 11:26 queuedata.json
[2024-05-19 11:17:45] -rwx------ 1 boincer umatlas     32251 May 18 11:27 runpilot2-wrapper.sh
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas       100 May 18 17:08 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 11:17:45] -rwxr-xr-x 1 boincer umatlas      7986 May 18 17:08 run_atlas
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas       105 May 18 17:08 job.xml
[2024-05-19 11:17:45] -rw-r--r-- 2 boincer umatlas 586070309 May 18 17:08 EVNT.38776201._000056.pool.root.1
[2024-05-19 11:17:45] -rw-r--r-- 2 boincer umatlas     17537 May 18 17:08 start_atlas.sh
[2024-05-19 11:17:45] drwxrwx--x 2 boincer umatlas      4096 May 18 17:08 shared
[2024-05-19 11:17:45] -rw-r--r-- 2 boincer umatlas    480004 May 18 17:08 input.tar.gz
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas         0 May 18 17:08 boinc_lockfile
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas      2629 May 18 17:08 pandaJob.out
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas       467 May 18 17:08 setup.sh.local
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas   1019075 May 18 17:09 agis_schedconf.cvmfs.json
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas   1324701 May 18 17:09 cric_ddmendpoints.json
[2024-05-19 11:17:45] drwx------ 4 boincer umatlas      4096 May 18 17:09 pilot3
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas      6387 May 19 11:13 init_data.xml
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas 353085457 May 19 11:14 HITS.38921007._001867.pool.root.1
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas       533 May 19 11:14 boinc_task_state.xml
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas      1077 May 19 11:16 memory_monitor_summary.json
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas         0 May 19 11:16 agis_ddmendpoints.agis.ALL.json
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas    978132 May 19 11:16 log.38921007._001867.job.log.tgz.1
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas        29 May 19 11:17 wrapper_checkpoint.txt
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas      8192 May 19 11:17 boinc_mmap_file
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas        95 May 19 11:17 pilot_heartbeat.json
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas      7780 May 19 11:17 heartbeat.json
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas      4397 May 19 11:17 pilotlog.txt
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas   7052904 May 19 11:17 log.38921007._001867.job.log.1
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas       357 May 19 11:17 output.list
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas       620 May 19 11:17 runtime_log
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas   8048640 May 19 11:17 result.tar.gz
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas       655 May 19 11:17 TDwLDmr8aS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmkHaKDmVjCSNn.diag
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas     11415 May 19 11:17 runtime_log.err
[2024-05-19 11:17:45] -rw-r--r-- 1 boincer umatlas     21917 May 19 11:17 stderr.txt
[2024-05-19 11:17:45] HITS file was successfully produced:
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas 353085457 May 19 11:14 shared/HITS.pool.root.1
[2024-05-19 11:17:45]  *** Contents of shared directory: ***
[2024-05-19 11:17:45] total 925508
[2024-05-19 11:17:45] -rw-r--r-- 2 boincer umatlas 586070309 May 18 17:08 ATLAS.root_0
[2024-05-19 11:17:45] -rw-r--r-- 2 boincer umatlas     17537 May 18 17:08 start_atlas.sh
[2024-05-19 11:17:45] -rw-r--r-- 2 boincer umatlas    480004 May 18 17:08 input.tar.gz
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas 353085457 May 19 11:14 HITS.pool.root.1
[2024-05-19 11:17:45] -rw------- 1 boincer umatlas   8048640 May 19 11:17 result.tar.gz
11:17:47 (154595): run_atlas exited; CPU time 159500.618809
11:17:47 (154595): called boinc_finish(0)

</stderr_txt>
]]>

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