Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
12:39:11 (243932): wrapper (7.7.26015): starting
12:39:11 (243932): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 12:39:11] Arguments: --nthreads 12
[2024-05-18 12:39:11] Threads: 12
[2024-05-18 12:39:11] Checking for CVMFS
[2024-05-18 12:39:11] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 12:39:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 12:39:11] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 12:39:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 12:39:11] 2.10.1.0 250101 185348 205372 132888 0 367 33977401 45568000 8681 130560 0 1137003205 99.780 663566954 18865 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 12:39:11] CVMFS is ok
[2024-05-18 12:39:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 12:39:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 12:39:11] Further information can be found at the LHC@home message board.
[2024-05-18 12:39:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 12:39:11] Checking for apptainer binary...
[2024-05-18 12:39:11] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 12:39:11] Running /usr/bin/apptainer --version
[2024-05-18 12:39:11] apptainer version 1.1.8-1.el7
[2024-05-18 12:39:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 12:39:12] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0168.triumf.lcg
[2024-05-18 12:39:12] apptainer works
[2024-05-18 12:39:12] Set ATHENA_PROC_NUMBER=12
[2024-05-18 12:39:12] Set ATHENA_CORE_NUMBER=12
[2024-05-18 12:39:12] Starting ATLAS job with PandaID=6209087588
[2024-05-18 12:39:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 15:43:32]  *** The last 200 lines of the pilot log: ***
[2024-05-18 15:43:32] 2024-05-18 22:43:11,659 | INFO     | chi2: 5.9687147382984715
[2024-05-18 15:43:32] 2024-05-18 22:43:11,659 | INFO     | model: linear, x: [1716061189.0, 1716061250.0, 1716061311.0, 1716061372.0, 1716061433.0, 1716061494.0, 1716061555.0, 1716061616.0, 1716061677.0, 1716061738.0, 1716
[2024-05-18 15:43:32] 2024-05-18 22:43:11,659 | INFO     | sum of square deviations: 1690450300.0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,660 | INFO     | sum of deviations: 102111476704.5
[2024-05-18 15:43:32] 2024-05-18 22:43:11,660 | INFO     | mean x: 1716066526.5
[2024-05-18 15:43:32] 2024-05-18 22:43:11,660 | INFO     | mean y: 2643085.6988636362
[2024-05-18 15:43:32] 2024-05-18 22:43:11,660 | INFO     | -- intersect: -103656179148.872
[2024-05-18 15:43:32] 2024-05-18 22:43:11,660 | INFO     | intersect: -103656179148.872
[2024-05-18 15:43:32] 2024-05-18 22:43:11,661 | INFO     | chi2: 5.2112863360156565
[2024-05-18 15:43:32] 2024-05-18 22:43:11,661 | INFO     | current chi2=5.2112863360156565 (change=12.689974902347881 %)
[2024-05-18 15:43:32] 2024-05-18 22:43:11,661 | INFO     | right removable region: 175
[2024-05-18 15:43:32] 2024-05-18 22:43:11,661 | INFO     | model: linear, x: [1716061494.0, 1716061555.0, 1716061616.0, 1716061677.0, 1716061738.0, 1716061799.0, 1716061860.0, 1716061921.0, 1716061982.0, 1716062043.0, 1716
[2024-05-18 15:43:32] 2024-05-18 22:43:11,661 | INFO     | sum of square deviations: 1690450300.0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,662 | INFO     | sum of deviations: 41690915002.999985
[2024-05-18 15:43:32] 2024-05-18 22:43:11,662 | INFO     | mean x: 1716066831.5
[2024-05-18 15:43:32] 2024-05-18 22:43:11,662 | INFO     | mean y: 2684200.534090909
[2024-05-18 15:43:32] 2024-05-18 22:43:11,662 | INFO     | -- intersect: -42320001306.122925
[2024-05-18 15:43:32] 2024-05-18 22:43:11,662 | INFO     | intersect: -42320001306.122925
[2024-05-18 15:43:32] 2024-05-18 22:43:11,662 | INFO     | chi2: 3.236150218683187
[2024-05-18 15:43:32] 2024-05-18 22:43:11,662 | INFO     | current chi2=3.236150218683187 (change=45.78145613295416 %)
[2024-05-18 15:43:32] 2024-05-18 22:43:11,663 | INFO     | model: linear, x: [1716061799.0, 1716061860.0, 1716061921.0, 1716061982.0, 1716062043.0, 1716062104.0, 1716062165.0, 1716062226.0, 1716062287.0, 1716062348.0, 1716
[2024-05-18 15:43:32] 2024-05-18 22:43:11,663 | INFO     | sum of square deviations: 1550429070.0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,663 | INFO     | sum of deviations: 3367844160.000002
[2024-05-18 15:43:32] 2024-05-18 22:43:11,663 | INFO     | mean x: 1716066984.0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,664 | INFO     | mean y: 2725946.0643274854
[2024-05-18 15:43:32] 2024-05-18 22:43:11,664 | INFO     | -- intersect: -3724917118.7249675
[2024-05-18 15:43:32] 2024-05-18 22:43:11,664 | INFO     | intersect: -3724917118.7249675
[2024-05-18 15:43:32] 2024-05-18 22:43:11,664 | INFO     | chi2: 1.7395736706312817
[2024-05-18 15:43:32] 2024-05-18 22:43:11,664 | INFO     | current chi2=1.7395736706312817 (change=46.24558339139378 %)
[2024-05-18 15:43:32] 2024-05-18 22:43:11,664 | INFO     | model: linear, x: [1716062104.0, 1716062165.0, 1716062226.0, 1716062287.0, 1716062348.0, 1716062409.0, 1716062470.0, 1716062531.0, 1716062592.0, 1716062653.0, 1716
[2024-05-18 15:43:32] 2024-05-18 22:43:11,664 | INFO     | sum of square deviations: 1418361477.5
[2024-05-18 15:43:32] 2024-05-18 22:43:11,665 | INFO     | sum of deviations: -20360789260.499996
[2024-05-18 15:43:32] 2024-05-18 22:43:11,665 | INFO     | mean x: 1716067136.5
[2024-05-18 15:43:32] 2024-05-18 22:43:11,665 | INFO     | mean y: 2753129.753012048
[2024-05-18 15:43:32] 2024-05-18 22:43:11,665 | INFO     | -- intersect: 24637151255.632866
[2024-05-18 15:43:32] 2024-05-18 22:43:11,665 | INFO     | intersect: 24637151255.632866
[2024-05-18 15:43:32] 2024-05-18 22:43:11,665 | INFO     | chi2: 1.0027818635003938
[2024-05-18 15:43:32] 2024-05-18 22:43:11,665 | INFO     | current chi2=1.0027818635003938 (change=42.35473435646506 %)
[2024-05-18 15:43:32] 2024-05-18 22:43:11,666 | INFO     | model: linear, x: [1716062409.0, 1716062470.0, 1716062531.0, 1716062592.0, 1716062653.0, 1716062714.0, 1716062775.0, 1716062836.0, 1716062897.0, 1716062958.0, 1716
[2024-05-18 15:43:32] 2024-05-18 22:43:11,666 | INFO     | sum of square deviations: 1294014960.0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,666 | INFO     | sum of deviations: -28546993194.999992
[2024-05-18 15:43:32] 2024-05-18 22:43:11,666 | INFO     | mean x: 1716067289.0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,666 | INFO     | mean y: 2763169.801242236
[2024-05-18 15:43:32] 2024-05-18 22:43:11,667 | INFO     | -- intersect: 37860564459.24312
[2024-05-18 15:43:32] 2024-05-18 22:43:11,667 | INFO     | intersect: 37860564459.24312
[2024-05-18 15:43:32] 2024-05-18 22:43:11,667 | INFO     | chi2: 0.9054043925176698
[2024-05-18 15:43:32] 2024-05-18 22:43:11,667 | INFO     | current chi2=0.9054043925176698 (change=9.710733164121066 %)
[2024-05-18 15:43:32] 2024-05-18 22:43:11,667 | INFO     | left removable region: 40
[2024-05-18 15:43:32] 2024-05-18 22:43:11,667 | INFO     | model: linear, x: [1716063629.0, 1716063690.0, 1716063751.0, 1716063812.0, 1716063873.0, 1716063934.0, 1716063995.0, 1716064056.0, 1716064117.0, 1716064178.0, 1716
[2024-05-18 15:43:32] 2024-05-18 22:43:11,667 | INFO     | sum of square deviations: 762879420.0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,668 | INFO     | sum of deviations: 2665087499.0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,668 | INFO     | mean x: 1716067716.0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,668 | INFO     | mean y: 2749598.066666667
[2024-05-18 15:43:32] 2024-05-18 22:43:11,668 | INFO     | -- intersect: -5992261536.653789
[2024-05-18 15:43:32] 2024-05-18 22:43:11,668 | INFO     | intersect: -5992261536.653789
[2024-05-18 15:43:32] 2024-05-18 22:43:11,668 | INFO     | chi2: 0.0004908174555569622
[2024-05-18 15:43:32] 2024-05-18 22:43:11,668 | INFO     | -- intersect: -5992261536.653789
[2024-05-18 15:43:32] 2024-05-18 22:43:11,668 | INFO     | current memory leak: 3.49 B/s (using 135 data points, chi2=0.00)
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | ..............................
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | . Timing measurements:
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | . get job = 0 s
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | . initial setup = 2 s
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | . payload setup = 5 s
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | . stage-in = 0 s
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | . payload execution = 10990 s
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | . stage-out = 2 s
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | . log creation = 0 s
[2024-05-18 15:43:32] 2024-05-18 22:43:11,669 | INFO     | ..............................
[2024-05-18 15:43:32] 2024-05-18 22:43:11,736 | INFO     | 
[2024-05-18 15:43:32] 2024-05-18 22:43:11,736 | INFO     | job summary report
[2024-05-18 15:43:32] 2024-05-18 22:43:11,736 | INFO     | --------------------------------------------------
[2024-05-18 15:43:32] 2024-05-18 22:43:11,736 | INFO     | PanDA job id: 6209087588
[2024-05-18 15:43:32] 2024-05-18 22:43:11,737 | INFO     | task id: 38921007
[2024-05-18 15:43:32] 2024-05-18 22:43:11,737 | INFO     | errors: (none)
[2024-05-18 15:43:32] 2024-05-18 22:43:11,737 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 15:43:32] 2024-05-18 22:43:11,737 | INFO     | pilot state: finished 
[2024-05-18 15:43:32] 2024-05-18 22:43:11,737 | INFO     | transexitcode: 0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,737 | INFO     | exeerrorcode: 0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,737 | INFO     | exeerrordiag: 
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | exitcode: 0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | exitmsg: OK
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | cpuconsumptiontime: 115254 s
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | nevents: 400
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | neventsw: 0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | pid: 256673
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | pgrp: 256673
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | corecount: 12
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | event service: False
[2024-05-18 15:43:32] 2024-05-18 22:43:11,738 | INFO     | sizes: {0: 2392181, 5: 2392387, 11: 2392443, 11000: 2421517, 11002: 2430471, 11005: 2430527, 11012: 2430825}
[2024-05-18 15:43:32] 2024-05-18 22:43:11,739 | INFO     | --------------------------------------------------
[2024-05-18 15:43:32] 2024-05-18 22:43:11,739 | INFO     | 
[2024-05-18 15:43:32] 2024-05-18 22:43:11,739 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 15:43:32] 2024-05-18 22:43:11,773 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,773 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,773 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,773 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,774 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,774 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,774 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,774 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,774 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,774 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,775 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 15:43:32] 2024-05-18 22:43:11,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,775 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 15:43:32] 2024-05-18 22:43:11,775 | INFO     | job 6209087588 has completed (purged errors)
[2024-05-18 15:43:32] 2024-05-18 22:43:11,776 | INFO     | overall cleanup function is called
[2024-05-18 15:43:32] 2024-05-18 22:43:12,784 | INFO     | --- collectZombieJob: --- 10, [256673]
[2024-05-18 15:43:32] 2024-05-18 22:43:12,785 | INFO     | zombie collector waiting for pid 256673
[2024-05-18 15:43:32] 2024-05-18 22:43:12,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 15:43:32] 2024-05-18 22:43:13,790 | INFO     | collected zombie processes
[2024-05-18 15:43:32] 2024-05-18 22:43:13,791 | INFO     | will now attempt to kill all subprocesses of pid=256673
[2024-05-18 15:43:32] 2024-05-18 22:43:13,962 | INFO     | process IDs to be killed: [256673] (in reverse order)
[2024-05-18 15:43:32] 2024-05-18 22:43:14,089 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 15:43:32] 2024-05-18 22:43:14,090 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 15:43:32] 2024-05-18 22:43:14,100 | INFO     | did not find any defunct processes belonging to 256673
[2024-05-18 15:43:32] 2024-05-18 22:43:14,109 | INFO     | did not find any defunct processes belonging to 256673
[2024-05-18 15:43:32] 2024-05-18 22:43:14,110 | INFO     | ready for new job
[2024-05-18 15:43:32] 2024-05-18 22:43:14,110 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 15:43:32] 2024-05-18 22:43:14,112 | INFO     | *************************************
[2024-05-18 15:43:32] 2024-05-18 22:43:14,112 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 15:43:32] 2024-05-18 22:43:14,113 | INFO     | *************************************
[2024-05-18 15:43:32] 2024-05-18 22:43:14,113 | INFO     | 
[2024-05-18 15:43:32] 2024-05-18 22:43:14,117 | INFO     | architecture information:
[2024-05-18 15:43:32] 2024-05-18 22:43:14,117 | INFO     | executing command: cat /etc/os-release
[2024-05-18 15:43:32] 2024-05-18 22:43:14,142 | INFO     | cat /etc/os-release:
[2024-05-18 15:43:32] NAME="CentOS Linux"
[2024-05-18 15:43:32] VERSION="7 (Core)"
[2024-05-18 15:43:32] ID="centos"
[2024-05-18 15:43:32] ID_LIKE="rhel fedora"
[2024-05-18 15:43:32] VERSION_ID="7"
[2024-05-18 15:43:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 15:43:32] ANSI_COLOR="0;31"
[2024-05-18 15:43:32] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 15:43:32] HOME_URL="https://www.centos.org/"
[2024-05-18 15:43:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 15:43:32] 
[2024-05-18 15:43:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 15:43:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 15:43:32] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 15:43:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 15:43:32] 
[2024-05-18 15:43:32] 2024-05-18 22:43:14,142 | INFO     | *************************************
[2024-05-18 15:43:32] 2024-05-18 22:43:14,645 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 15:43:32] 2024-05-18 22:43:14,670 | INFO     | sufficient remaining disk space (2099320455168 B)
[2024-05-18 15:43:32] 2024-05-18 22:43:14,671 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 15:43:32] 2024-05-18 22:43:14,671 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 15:43:32] 2024-05-18 22:43:14,671 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 15:43:32] 2024-05-18 22:43:14,672 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 15:43:32] 2024-05-18 22:43:14,672 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 15:43:32] 2024-05-18 22:43:14,672 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 15:43:32] 2024-05-18 22:43:14,673 | INFO     | aborting loop
[2024-05-18 15:43:32] 2024-05-18 22:43:14,673 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 15:43:32] 2024-05-18 22:43:14,673 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 15:43:32] 2024-05-18 22:43:14,940 | INFO     | all data control threads have been joined
[2024-05-18 15:43:32] 2024-05-18 22:43:15,009 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 15:43:32] 2024-05-18 22:43:15,544 | INFO     | all payload control threads have been joined
[2024-05-18 15:43:32] 2024-05-18 22:43:15,672 | INFO     | [job] retrieve thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:15,679 | INFO     | [job] job monitor thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:15,946 | INFO     | [data] control thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:16,210 | INFO     | [payload] validate_post thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:16,361 | INFO     | all job control threads have been joined
[2024-05-18 15:43:32] 2024-05-18 22:43:16,385 | INFO     | [job] validate thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:16,546 | INFO     | [payload] control thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:16,583 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:16,624 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:16,678 | INFO     | [data] copytool_out thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:16,704 | INFO     | [data] copytool_in thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:16,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 15:43:32] 2024-05-18 22:43:16,801 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:17,006 | INFO     | [payload] failed_post thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:17,366 | INFO     | [job] control thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:17,753 | INFO     | [job] queue monitor thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:19,016 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:24,769 | INFO     | job.realtimelogging is not enabled
[2024-05-18 15:43:32] 2024-05-18 22:43:25,774 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 15:43:32] 2024-05-18 22:43:26,087 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900452747072)>', '<ExcThread(monitor, started 139899902621440)>']
[2024-05-18 15:43:32] 2024-05-18 22:43:26,726 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 15:43:32] 2024-05-18 22:43:26,726 | INFO     | [monitor] control thread has ended
[2024-05-18 15:43:32] 2024-05-18 22:43:31,112 | INFO     | all workflow threads have been joined
[2024-05-18 15:43:32] 2024-05-18 22:43:31,113 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 15:43:32] 2024-05-18 22:43:31,113 | INFO     | traces error code: 0
[2024-05-18 15:43:32] 2024-05-18 22:43:31,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 15:43:32] 2024-05-18 22:43:31,218 [wrapper] ==== pilot stdout END ====
[2024-05-18 15:43:32] 2024-05-18 22:43:31,223 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 15:43:32] 2024-05-18 22:43:31,226 [wrapper] pilotpid: 248138
[2024-05-18 15:43:32] 2024-05-18 22:43:31,230 [wrapper] Pilot exit status: 0
[2024-05-18 15:43:32] 2024-05-18 22:43:31,243 [wrapper] pandaids: 6209087588
[2024-05-18 15:43:32] 2024-05-18 22:43:31,325 [wrapper] cleanup: SIGTERM to supervisor_pilot 124962 248139
[2024-05-18 15:43:32] 2024-05-18 22:43:31,329 [wrapper] Test setup, not cleaning
[2024-05-18 15:43:32] 2024-05-18 22:43:31,332 [wrapper] ==== wrapper stdout END ====
[2024-05-18 15:43:32] 2024-05-18 22:43:31,335 [wrapper] ==== wrapper stderr END ====
[2024-05-18 15:43:32] 2024-05-18 22:43:31,341 [wrapper] apfmon messages muted
[2024-05-18 15:43:32]  *** Error codes and diagnostics ***
[2024-05-18 15:43:32]     "exeErrorCode": 0,
[2024-05-18 15:43:32]     "exeErrorDiag": "",
[2024-05-18 15:43:32]     "pilotErrorCode": 0,
[2024-05-18 15:43:32]     "pilotErrorDiag": "",
[2024-05-18 15:43:32]  *** Listing of results directory ***
[2024-05-18 15:43:32] total 915348
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc    467845 May 18 08:04 pilot3.tar.gz
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc      5633 May 18 08:18 queuedata.json
[2024-05-18 15:43:32] -rwx------ 1 boinc boinc     32251 May 18 08:19 runpilot2-wrapper.sh
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc       100 May 18 12:39 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 15:43:32] -rwxr-xr-x 1 boinc boinc      7986 May 18 12:39 run_atlas
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc       105 May 18 12:39 job.xml
[2024-05-18 15:43:32] -rw-r--r-- 2 boinc boinc 588004759 May 18 12:39 EVNT.38776201._000038.pool.root.1
[2024-05-18 15:43:32] -rw-r--r-- 2 boinc boinc    480011 May 18 12:39 input.tar.gz
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc      6622 May 18 12:39 init_data.xml
[2024-05-18 15:43:32] -rw-r--r-- 2 boinc boinc     17537 May 18 12:39 start_atlas.sh
[2024-05-18 15:43:32] drwxrwx--x 2 boinc boinc      4096 May 18 12:39 shared
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc         0 May 18 12:39 boinc_lockfile
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc      2626 May 18 12:39 pandaJob.out
[2024-05-18 15:43:32] -rw------- 1 boinc boinc       424 May 18 12:39 setup.sh.local
[2024-05-18 15:43:32] -rw------- 1 boinc boinc   1019083 May 18 12:39 agis_schedconf.cvmfs.json
[2024-05-18 15:43:32] -rw------- 1 boinc boinc   1324701 May 18 12:39 cric_ddmendpoints.json
[2024-05-18 15:43:32] drwx------ 4 boinc boinc      4096 May 18 12:39 pilot3
[2024-05-18 15:43:32] -rw------- 1 boinc boinc 342601428 May 18 15:42 HITS.38921007._001791.pool.root.1
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc       532 May 18 15:42 boinc_task_state.xml
[2024-05-18 15:43:32] -rw------- 1 boinc boinc        95 May 18 15:42 pilot_heartbeat.json
[2024-05-18 15:43:32] -rw------- 1 boinc boinc      1057 May 18 15:42 memory_monitor_summary.json
[2024-05-18 15:43:32] -rw------- 1 boinc boinc         0 May 18 15:43 agis_ddmendpoints.agis.ALL.json
[2024-05-18 15:43:32] -rw------- 1 boinc boinc    447236 May 18 15:43 log.38921007._001791.job.log.tgz.1
[2024-05-18 15:43:32] -rw------- 1 boinc boinc      7778 May 18 15:43 heartbeat.json
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc        29 May 18 15:43 wrapper_checkpoint.txt
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc      8192 May 18 15:43 boinc_mmap_file
[2024-05-18 15:43:32] -rw------- 1 boinc boinc      4405 May 18 15:43 pilotlog.txt
[2024-05-18 15:43:32] -rw------- 1 boinc boinc   1141279 May 18 15:43 log.38921007._001791.job.log.1
[2024-05-18 15:43:32] -rw------- 1 boinc boinc       357 May 18 15:43 output.list
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc       620 May 18 15:43 runtime_log
[2024-05-18 15:43:32] -rw------- 1 boinc boinc   1607680 May 18 15:43 result.tar.gz
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc     11287 May 18 15:43 runtime_log.err
[2024-05-18 15:43:32] -rw------- 1 boinc boinc       658 May 18 15:43 FGTNDmE1aS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDm65LKDmePZ4vn.diag
[2024-05-18 15:43:32] -rw-r--r-- 1 boinc boinc     21878 May 18 15:43 stderr.txt
[2024-05-18 15:43:32] HITS file was successfully produced:
[2024-05-18 15:43:32] -rw------- 1 boinc boinc 342601428 May 18 15:42 shared/HITS.pool.root.1
[2024-05-18 15:43:32]  *** Contents of shared directory: ***
[2024-05-18 15:43:32] total 910868
[2024-05-18 15:43:32] -rw-r--r-- 2 boinc boinc 588004759 May 18 12:39 ATLAS.root_0
[2024-05-18 15:43:32] -rw-r--r-- 2 boinc boinc    480011 May 18 12:39 input.tar.gz
[2024-05-18 15:43:32] -rw-r--r-- 2 boinc boinc     17537 May 18 12:39 start_atlas.sh
[2024-05-18 15:43:32] -rw------- 1 boinc boinc 342601428 May 18 15:42 HITS.pool.root.1
[2024-05-18 15:43:32] -rw------- 1 boinc boinc   1607680 May 18 15:43 result.tar.gz
15:43:33 (243932): run_atlas exited; CPU time 114941.277302
15:43:33 (243932): called boinc_finish(0)

</stderr_txt>
]]>

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