Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
03:09:48 (81861): wrapper (7.7.26015): starting
03:09:48 (81861): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 03:09:48] Arguments: --nthreads 12
[2024-05-19 03:09:48] Threads: 12
[2024-05-19 03:09:48] Checking for CVMFS
[2024-05-19 03:09:48] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 03:09:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 03:09:48] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 03:09:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 03:09:48] 2.10.1.0 267274 186217 161100 132909 1 118 39531258 45568001 6878 130560 0 599042830 99.732 431892354 11014 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-19 03:09:48] CVMFS is ok
[2024-05-19 03:09:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 03:09:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 03:09:48] Further information can be found at the LHC@home message board.
[2024-05-19 03:09:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 03:09:48] Checking for apptainer binary...
[2024-05-19 03:09:48] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 03:09:48] Running /usr/bin/apptainer --version
[2024-05-19 03:09:48] apptainer version 1.1.8-1.el7
[2024-05-19 03:09:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 03:09:49] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0041.triumf.lcg
[2024-05-19 03:09:49] apptainer works
[2024-05-19 03:09:49] Set ATHENA_PROC_NUMBER=12
[2024-05-19 03:09:49] Set ATHENA_CORE_NUMBER=12
[2024-05-19 03:09:49] Starting ATLAS job with PandaID=6209073560
[2024-05-19 03:09:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 04:29:08]  *** The last 200 lines of the pilot log: ***
[2024-05-19 04:29:08]  ddm_activity=['write_lan', 'write_wan']
[2024-05-19 04:29:08]  ddmendpoint=NDGF-T1_DATADISK
[2024-05-19 04:29:08]  direct_access_lan=False
[2024-05-19 04:29:08]  direct_access_wan=False
[2024-05-19 04:29:08]  domain=
[2024-05-19 04:29:08]  filesize=377722
[2024-05-19 04:29:08]  filetype=log
[2024-05-19 04:29:08]  guid=5cf00bf1-a0cb-464d-b075-2de142b78150
[2024-05-19 04:29:08]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-19 04:29:08]  is_tar=False
[2024-05-19 04:29:08]  lfn=log.38776125._017041.job.log.tgz.1
[2024-05-19 04:29:08]  mtime=0
[2024-05-19 04:29:08]  protocol_id=None
[2024-05-19 04:29:08]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 04:29:08]  replicas=None
[2024-05-19 04:29:08]  scope=mc23_13p6TeV
[2024-05-19 04:29:08]  status=None
[2024-05-19 04:29:08]  status_code=0
[2024-05-19 04:29:08]  storage_token=
[2024-05-19 04:29:08]  surl=/home/boinc/slots/0/PanDA_Pilot-6209073560/log.38776125._017041.job.log.tgz.1
[2024-05-19 04:29:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/96/log.38776125._017041.job.log.tgz.1
[2024-05-19 04:29:08]  workdir=None
[2024-05-19 04:29:08] ]
[2024-05-19 04:29:08] 2024-05-19 11:28:44,368 | INFO     | transferring file log.38776125._017041.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209073560/log.38776125._017041.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-19 04:29:08] 2024-05-19 11:28:44,368 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209073560/log.38776125._017041.job.log.tgz.1 /home/boinc/slots/0/log.38776125._017041.job.log.t
[2024-05-19 04:29:08] 2024-05-19 11:28:44,384 | INFO     | adding to output.list: log.38776125._017041.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9d/96/log.38776125._017041.job.log.tg
[2024-05-19 04:29:08] 2024-05-19 11:28:44,385 | INFO     | summary of transferred files:
[2024-05-19 04:29:08] 2024-05-19 11:28:44,385 | INFO     |  -- lfn=log.38776125._017041.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 04:29:08] 2024-05-19 11:28:44,385 | INFO     | stage-out finished correctly
[2024-05-19 04:29:08] 2024-05-19 11:28:46,520 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 04:29:08] 2024-05-19 11:28:47,636 | INFO     | job 6209073560 has state=finished
[2024-05-19 04:29:08] 2024-05-19 11:28:47,636 | INFO     | preparing for final server update for job 6209073560 in state='finished'
[2024-05-19 04:29:08] 2024-05-19 11:28:47,637 | INFO     | this job has now completed (state=finished)
[2024-05-19 04:29:08] 2024-05-19 11:28:47,637 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 04:29:08] 2024-05-19 11:28:47,637 | INFO     | job 6209073560 has finished - writing final server update
[2024-05-19 04:29:08] 2024-05-19 11:28:47,638 | INFO     | total number of processed events: 400 (read)
[2024-05-19 04:29:08] 2024-05-19 11:28:47,643 | INFO     | executing command: lscpu
[2024-05-19 04:29:08] 2024-05-19 11:28:47,713 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-19 04:29:08] 2024-05-19 11:28:47,713 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 04:29:08] 2024-05-19 11:28:47,768 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 04:29:08] 2024-05-19 11:28:50,983 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 04:29:08] 2024-05-19 11:28:50,983 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209073560/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 04:29:08] 2024-05-19 11:28:50,984 | INFO     | extracted standard info from prmon json
[2024-05-19 04:29:08] 2024-05-19 11:28:50,984 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 04:29:08] 2024-05-19 11:28:50,984 | WARNING  | GPU info not found in prmon json
[2024-05-19 04:29:08] 2024-05-19 11:28:50,985 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 04:29:08] 2024-05-19 11:28:50,985 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 04:29:08] 2024-05-19 11:28:50,990 | INFO     | fitting pss+swap vs Time
[2024-05-19 04:29:08] 2024-05-19 11:28:50,991 | INFO     | model: linear, x: [1716113727.0, 1716113788.0, 1716113849.0, 1716113910.0, 1716113971.0, 1716114032.0, 1716114093.0, 1716114154.0, 1716114215.0, 1716114276.0, 1716
[2024-05-19 04:29:08] 2024-05-19 11:28:50,991 | INFO     | sum of square deviations: 110960959.77464782
[2024-05-19 04:29:08] 2024-05-19 11:28:50,991 | INFO     | sum of deviations: 26287487035.084496
[2024-05-19 04:29:08] 2024-05-19 11:28:50,992 | INFO     | mean x: 1716115862.056338
[2024-05-19 04:29:08] 2024-05-19 11:28:50,992 | INFO     | mean y: 2601001.4788732394
[2024-05-19 04:29:08] 2024-05-19 11:28:50,992 | INFO     | -- intersect: -406558171058.606
[2024-05-19 04:29:08] 2024-05-19 11:28:50,992 | INFO     | intersect: -406558171058.606
[2024-05-19 04:29:08] 2024-05-19 11:28:50,992 | INFO     | chi2: 2.9197487429686593
[2024-05-19 04:29:08] 2024-05-19 11:28:50,992 | INFO     | -- intersect: -406558171058.606
[2024-05-19 04:29:08] 2024-05-19 11:28:50,992 | INFO     | current memory leak: 236.91 B/s (using 71 data points, chi2=2.92)
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | ..............................
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | . Timing measurements:
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | . get job = 0 s
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | . initial setup = 2 s
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | . payload setup = 5 s
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | . stage-in = 0 s
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | . payload execution = 4701 s
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | . stage-out = 0 s
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | . log creation = 0 s
[2024-05-19 04:29:08] 2024-05-19 11:28:50,993 | INFO     | ..............................
[2024-05-19 04:29:08] 2024-05-19 11:28:51,048 | INFO     | 
[2024-05-19 04:29:08] 2024-05-19 11:28:51,048 | INFO     | job summary report
[2024-05-19 04:29:08] 2024-05-19 11:28:51,048 | INFO     | --------------------------------------------------
[2024-05-19 04:29:08] 2024-05-19 11:28:51,049 | INFO     | PanDA job id: 6209073560
[2024-05-19 04:29:08] 2024-05-19 11:28:51,049 | INFO     | task id: 38776125
[2024-05-19 04:29:08] 2024-05-19 11:28:51,049 | INFO     | errors: (none)
[2024-05-19 04:29:08] 2024-05-19 11:28:51,049 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 04:29:08] 2024-05-19 11:28:51,049 | INFO     | pilot state: finished 
[2024-05-19 04:29:08] 2024-05-19 11:28:51,049 | INFO     | transexitcode: 0
[2024-05-19 04:29:08] 2024-05-19 11:28:51,049 | INFO     | exeerrorcode: 0
[2024-05-19 04:29:08] 2024-05-19 11:28:51,049 | INFO     | exeerrordiag: 
[2024-05-19 04:29:08] 2024-05-19 11:28:51,050 | INFO     | exitcode: 0
[2024-05-19 04:29:08] 2024-05-19 11:28:51,050 | INFO     | exitmsg: OK
[2024-05-19 04:29:08] 2024-05-19 11:28:51,050 | INFO     | cpuconsumptiontime: 31932 s
[2024-05-19 04:29:08] 2024-05-19 11:28:51,050 | INFO     | nevents: 400
[2024-05-19 04:29:08] 2024-05-19 11:28:51,050 | INFO     | neventsw: 0
[2024-05-19 04:29:08] 2024-05-19 11:28:51,050 | INFO     | pid: 92649
[2024-05-19 04:29:08] 2024-05-19 11:28:51,050 | INFO     | pgrp: 92649
[2024-05-19 04:29:08] 2024-05-19 11:28:51,050 | INFO     | corecount: 12
[2024-05-19 04:29:08] 2024-05-19 11:28:51,051 | INFO     | event service: False
[2024-05-19 04:29:08] 2024-05-19 11:28:51,051 | INFO     | sizes: {0: 2390686, 1: 2392219, 5: 2392425, 12: 2392481, 4709: 2418635, 4710: 2418634, 4711: 2427772, 4713: 2427828, 4717: 2427998}
[2024-05-19 04:29:08] 2024-05-19 11:28:51,051 | INFO     | --------------------------------------------------
[2024-05-19 04:29:08] 2024-05-19 11:28:51,051 | INFO     | 
[2024-05-19 04:29:08] 2024-05-19 11:28:51,051 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 04:29:08] 2024-05-19 11:28:51,060 | WARNING  | process 92649 is no longer using CPU - aborting
[2024-05-19 04:29:08] 2024-05-19 11:28:51,060 | INFO     | aborting job monitoring since job object (job id=6209073560) has expired
[2024-05-19 04:29:08] 2024-05-19 11:28:51,084 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,084 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,084 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,084 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 04:29:08] 2024-05-19 11:28:51,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,086 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 04:29:08] 2024-05-19 11:28:51,086 | INFO     | job 6209073560 has completed (purged errors)
[2024-05-19 04:29:08] 2024-05-19 11:28:51,086 | INFO     | overall cleanup function is called
[2024-05-19 04:29:08] 2024-05-19 11:28:52,094 | INFO     | --- collectZombieJob: --- 10, [92649]
[2024-05-19 04:29:08] 2024-05-19 11:28:52,094 | INFO     | zombie collector waiting for pid 92649
[2024-05-19 04:29:08] 2024-05-19 11:28:52,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 04:29:08] 2024-05-19 11:28:53,100 | INFO     | collected zombie processes
[2024-05-19 04:29:08] 2024-05-19 11:28:53,100 | INFO     | will now attempt to kill all subprocesses of pid=92649
[2024-05-19 04:29:08] 2024-05-19 11:28:53,222 | INFO     | process IDs to be killed: [92649] (in reverse order)
[2024-05-19 04:29:08] 2024-05-19 11:28:53,333 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 04:29:08] 2024-05-19 11:28:53,333 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 04:29:08] 2024-05-19 11:28:53,342 | INFO     | did not find any defunct processes belonging to 92649
[2024-05-19 04:29:08] 2024-05-19 11:28:53,349 | INFO     | did not find any defunct processes belonging to 92649
[2024-05-19 04:29:08] 2024-05-19 11:28:53,349 | INFO     | ready for new job
[2024-05-19 04:29:08] 2024-05-19 11:28:53,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 04:29:08] 2024-05-19 11:28:53,352 | INFO     | *************************************
[2024-05-19 04:29:08] 2024-05-19 11:28:53,352 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-19 04:29:08] 2024-05-19 11:28:53,352 | INFO     | *************************************
[2024-05-19 04:29:08] 2024-05-19 11:28:53,352 | INFO     | 
[2024-05-19 04:29:08] 2024-05-19 11:28:53,356 | INFO     | architecture information:
[2024-05-19 04:29:08] 2024-05-19 11:28:53,357 | INFO     | executing command: cat /etc/os-release
[2024-05-19 04:29:08] 2024-05-19 11:28:53,376 | INFO     | cat /etc/os-release:
[2024-05-19 04:29:08] NAME="CentOS Linux"
[2024-05-19 04:29:08] VERSION="7 (Core)"
[2024-05-19 04:29:08] ID="centos"
[2024-05-19 04:29:08] ID_LIKE="rhel fedora"
[2024-05-19 04:29:08] VERSION_ID="7"
[2024-05-19 04:29:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 04:29:08] ANSI_COLOR="0;31"
[2024-05-19 04:29:08] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 04:29:08] HOME_URL="https://www.centos.org/"
[2024-05-19 04:29:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 04:29:08] 
[2024-05-19 04:29:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 04:29:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 04:29:08] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 04:29:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 04:29:08] 
[2024-05-19 04:29:08] 2024-05-19 11:28:53,376 | INFO     | *************************************
[2024-05-19 04:29:08] 2024-05-19 11:28:53,878 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 04:29:08] 2024-05-19 11:28:53,903 | INFO     | sufficient remaining disk space (2026884825088 B)
[2024-05-19 04:29:08] 2024-05-19 11:28:53,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 04:29:08] 2024-05-19 11:28:53,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 04:29:08] 2024-05-19 11:28:54,365 | INFO     | all data control threads have been joined
[2024-05-19 04:29:08] 2024-05-19 11:28:54,569 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 04:29:08] 2024-05-19 11:28:54,569 | INFO     | aborting loop
[2024-05-19 04:29:08] 2024-05-19 11:28:54,738 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 04:29:08] 2024-05-19 11:28:54,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 04:29:08] 2024-05-19 11:28:54,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 04:29:08] 2024-05-19 11:28:54,909 | INFO     | [job] retrieve thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:54,929 | INFO     | all payload control threads have been joined
[2024-05-19 04:29:08] 2024-05-19 11:28:54,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 04:29:08] 2024-05-19 11:28:55,155 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:55,166 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:55,170 | INFO     | [data] copytool_in thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:55,232 | INFO     | all job control threads have been joined
[2024-05-19 04:29:08] 2024-05-19 11:28:55,349 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:55,371 | INFO     | [data] control thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:55,569 | INFO     | [job] job monitor thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:55,601 | INFO     | [payload] validate_post thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:55,850 | INFO     | [job] validate thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:55,933 | INFO     | [payload] control thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:56,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 04:29:08] 2024-05-19 11:28:56,238 | INFO     | [job] control thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:56,317 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:56,360 | INFO     | [payload] failed_post thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:56,958 | INFO     | [data] copytool_out thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:57,063 | INFO     | [job] queue monitor thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:28:57,119 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 04:29:08] 2024-05-19 11:29:01,125 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 04:29:08] 2024-05-19 11:29:02,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139760750450496)>', '<ExcThread(monitor, started 139760089679616)>']
[2024-05-19 04:29:08] 2024-05-19 11:29:02,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 04:29:08] 2024-05-19 11:29:02,778 | INFO     | [monitor] control thread has ended
[2024-05-19 04:29:08] 2024-05-19 11:29:07,386 | INFO     | all workflow threads have been joined
[2024-05-19 04:29:08] 2024-05-19 11:29:07,386 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 04:29:08] 2024-05-19 11:29:07,387 | INFO     | traces error code: 0
[2024-05-19 04:29:08] 2024-05-19 11:29:07,387 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 04:29:08] 2024-05-19 11:29:07,488 [wrapper] ==== pilot stdout END ====
[2024-05-19 04:29:08] 2024-05-19 11:29:07,492 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 04:29:08] 2024-05-19 11:29:07,495 [wrapper] pilotpid: 86028
[2024-05-19 04:29:08] 2024-05-19 11:29:07,498 [wrapper] Pilot exit status: 0
[2024-05-19 04:29:08] 2024-05-19 11:29:07,507 [wrapper] pandaids: 6209073560
[2024-05-19 04:29:08] 2024-05-19 11:29:07,570 [wrapper] cleanup: SIGTERM to supervisor_pilot 161877 86029
[2024-05-19 04:29:08] 2024-05-19 11:29:07,573 [wrapper] Test setup, not cleaning
[2024-05-19 04:29:08] 2024-05-19 11:29:07,576 [wrapper] ==== wrapper stdout END ====
[2024-05-19 04:29:08] 2024-05-19 11:29:07,579 [wrapper] ==== wrapper stderr END ====
[2024-05-19 04:29:08] 2024-05-19 11:29:07,584 [wrapper] apfmon messages muted
[2024-05-19 04:29:08]  *** Error codes and diagnostics ***
[2024-05-19 04:29:08]     "exeErrorCode": 0,
[2024-05-19 04:29:08]     "exeErrorDiag": "",
[2024-05-19 04:29:08]     "pilotErrorCode": 0,
[2024-05-19 04:29:08]     "pilotErrorDiag": "",
[2024-05-19 04:29:08]  *** Listing of results directory ***
[2024-05-19 04:29:08] total 824716
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc    467845 May 18 07:41 pilot3.tar.gz
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc      5633 May 18 07:48 queuedata.json
[2024-05-19 04:29:08] -rwx------ 1 boinc boinc     32251 May 18 07:50 runpilot2-wrapper.sh
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc       100 May 19 03:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 04:29:08] -rwxr-xr-x 1 boinc boinc      7986 May 19 03:09 run_atlas
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc       105 May 19 03:09 job.xml
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc      6627 May 19 03:09 init_data.xml
[2024-05-19 04:29:08] -rw-r--r-- 2 boinc boinc 598212939 May 19 03:09 EVNT.38776119._000319.pool.root.1
[2024-05-19 04:29:08] -rw-r--r-- 2 boinc boinc     17537 May 19 03:09 start_atlas.sh
[2024-05-19 04:29:08] drwxrwx--x 2 boinc boinc      4096 May 19 03:09 shared
[2024-05-19 04:29:08] -rw-r--r-- 2 boinc boinc    480020 May 19 03:09 input.tar.gz
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc         0 May 19 03:09 boinc_lockfile
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc      2633 May 19 03:09 pandaJob.out
[2024-05-19 04:29:08] -rw------- 1 boinc boinc       424 May 19 03:09 setup.sh.local
[2024-05-19 04:29:08] -rw------- 1 boinc boinc   1014061 May 19 03:09 agis_schedconf.cvmfs.json
[2024-05-19 04:29:08] -rw------- 1 boinc boinc         0 May 19 03:09 agis_ddmendpoints.agis.ALL.json
[2024-05-19 04:29:08] -rw------- 1 boinc boinc   1324701 May 19 03:09 cric_ddmendpoints.json
[2024-05-19 04:29:08] drwx------ 4 boinc boinc      4096 May 19 03:09 pilot3
[2024-05-19 04:29:08] -rw------- 1 boinc boinc 241097240 May 19 04:28 HITS.38776125._017041.pool.root.1
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc       530 May 19 04:28 boinc_task_state.xml
[2024-05-19 04:29:08] -rw------- 1 boinc boinc        95 May 19 04:28 pilot_heartbeat.json
[2024-05-19 04:29:08] -rw------- 1 boinc boinc      1054 May 19 04:28 memory_monitor_summary.json
[2024-05-19 04:29:08] -rw------- 1 boinc boinc    377722 May 19 04:28 log.38776125._017041.job.log.tgz.1
[2024-05-19 04:29:08] -rw------- 1 boinc boinc      7773 May 19 04:28 heartbeat.json
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc      8192 May 19 04:29 boinc_mmap_file
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc        27 May 19 04:29 wrapper_checkpoint.txt
[2024-05-19 04:29:08] -rw------- 1 boinc boinc      4210 May 19 04:29 pilotlog.txt
[2024-05-19 04:29:08] -rw------- 1 boinc boinc    454672 May 19 04:29 log.38776125._017041.job.log.1
[2024-05-19 04:29:08] -rw------- 1 boinc boinc       357 May 19 04:29 output.list
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc       620 May 19 04:29 runtime_log
[2024-05-19 04:29:08] -rw------- 1 boinc boinc    849920 May 19 04:29 result.tar.gz
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc     11286 May 19 04:29 runtime_log.err
[2024-05-19 04:29:08] -rw------- 1 boinc boinc       653 May 19 04:29 pIULDm3YaS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmbGaKDmRTgbzm.diag
[2024-05-19 04:29:08] -rw-r--r-- 1 boinc boinc     21252 May 19 04:29 stderr.txt
[2024-05-19 04:29:08] HITS file was successfully produced:
[2024-05-19 04:29:08] -rw------- 1 boinc boinc 241097240 May 19 04:28 shared/HITS.pool.root.1
[2024-05-19 04:29:08]  *** Contents of shared directory: ***
[2024-05-19 04:29:08] total 820976
[2024-05-19 04:29:08] -rw-r--r-- 2 boinc boinc 598212939 May 19 03:09 ATLAS.root_0
[2024-05-19 04:29:08] -rw-r--r-- 2 boinc boinc     17537 May 19 03:09 start_atlas.sh
[2024-05-19 04:29:08] -rw-r--r-- 2 boinc boinc    480020 May 19 03:09 input.tar.gz
[2024-05-19 04:29:08] -rw------- 1 boinc boinc 241097240 May 19 04:28 HITS.pool.root.1
[2024-05-19 04:29:08] -rw------- 1 boinc boinc    849920 May 19 04:29 result.tar.gz
04:29:09 (81861): run_atlas exited; CPU time 31808.578047
04:29:09 (81861): called boinc_finish(0)

</stderr_txt>
]]>

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