Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
14:19:53 (196929): wrapper (7.7.26015): starting
14:19:53 (196929): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 14:19:53] Arguments: --nthreads 12
[2024-05-18 14:19:53] Threads: 12
[2024-05-18 14:19:53] Checking for CVMFS
[2024-05-18 14:19:53] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 14:19:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 14:19:53] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 14:19:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 14:19:53] 2.10.1.0 168680 185446 164720 132891 0 61 44232872 45568001 10190 130560 0 1249961021 99.773 719879771 16523 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 14:19:53] CVMFS is ok
[2024-05-18 14:19:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 14:19:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 14:19:53] Further information can be found at the LHC@home message board.
[2024-05-18 14:19:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 14:19:53] Checking for apptainer binary...
[2024-05-18 14:19:53] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 14:19:53] Running /usr/bin/apptainer --version
[2024-05-18 14:19:53] apptainer version 1.1.8-1.el7
[2024-05-18 14:19:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 14:19:54] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0058.triumf.lcg
[2024-05-18 14:19:54] apptainer works
[2024-05-18 14:19:54] Set ATHENA_PROC_NUMBER=12
[2024-05-18 14:19:54] Set ATHENA_CORE_NUMBER=12
[2024-05-18 14:19:55] Starting ATLAS job with PandaID=6209073536
[2024-05-18 14:19:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 15:21:20]  *** The last 200 lines of the pilot log: ***
[2024-05-18 15:21:20]  domain=
[2024-05-18 15:21:20]  filesize=342003
[2024-05-18 15:21:20]  filetype=log
[2024-05-18 15:21:20]  guid=fefcf2c2-e851-447e-af05-471235404a98
[2024-05-18 15:21:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 15:21:20]  is_tar=False
[2024-05-18 15:21:20]  lfn=log.38776125._017019.job.log.tgz.1
[2024-05-18 15:21:20]  mtime=0
[2024-05-18 15:21:20]  protocol_id=None
[2024-05-18 15:21:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 15:21:20]  replicas=None
[2024-05-18 15:21:20]  scope=mc23_13p6TeV
[2024-05-18 15:21:20]  status=None
[2024-05-18 15:21:20]  status_code=0
[2024-05-18 15:21:20]  storage_token=
[2024-05-18 15:21:20]  surl=/home/boinc/slots/0/PanDA_Pilot-6209073536/log.38776125._017019.job.log.tgz.1
[2024-05-18 15:21:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/cd/log.38776125._017019.job.log.tgz.1
[2024-05-18 15:21:20]  workdir=None
[2024-05-18 15:21:20] ]
[2024-05-18 15:21:20] 2024-05-18 22:20:51,941 | INFO     | transferring file log.38776125._017019.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209073536/log.38776125._017019.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 15:21:20] 2024-05-18 22:20:51,942 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209073536/log.38776125._017019.job.log.tgz.1 /home/boinc/slots/0/log.38776125._017019.job.log.t
[2024-05-18 15:21:20] 2024-05-18 22:20:51,960 | INFO     | adding to output.list: log.38776125._017019.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/27/cd/log.38776125._017019.job.log.tg
[2024-05-18 15:21:20] 2024-05-18 22:20:51,961 | INFO     | summary of transferred files:
[2024-05-18 15:21:20] 2024-05-18 22:20:51,961 | INFO     |  -- lfn=log.38776125._017019.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 15:21:20] 2024-05-18 22:20:51,961 | INFO     | stage-out finished correctly
[2024-05-18 15:21:20] 2024-05-18 22:20:52,928 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 15:21:20] 2024-05-18 22:20:53,142 | INFO     | monitor loop #284: job 0:6209073536 is in state 'finished'
[2024-05-18 15:21:20] 2024-05-18 22:20:53,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:21:20] 2024-05-18 22:20:54,986 | INFO     | job 6209073536 has state=finished
[2024-05-18 15:21:20] 2024-05-18 22:20:54,986 | INFO     | preparing for final server update for job 6209073536 in state='finished'
[2024-05-18 15:21:20] 2024-05-18 22:20:54,986 | INFO     | this job has now completed (state=finished)
[2024-05-18 15:21:20] 2024-05-18 22:20:54,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 15:21:20] 2024-05-18 22:20:54,987 | INFO     | job 6209073536 has finished - writing final server update
[2024-05-18 15:21:20] 2024-05-18 22:20:54,987 | INFO     | total number of processed events: 400 (read)
[2024-05-18 15:21:20] 2024-05-18 22:20:54,991 | INFO     | executing command: lscpu
[2024-05-18 15:21:20] 2024-05-18 22:20:55,038 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 15:21:20] 2024-05-18 22:20:55,039 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 15:21:20] 2024-05-18 22:20:55,092 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 15:21:20] 2024-05-18 22:20:55,645 | INFO     | monitor loop #285: job 0:6209073536 is in state 'finished'
[2024-05-18 15:21:20] 2024-05-18 22:20:55,645 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:21:20] 2024-05-18 22:20:58,084 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 15:21:20] 2024-05-18 22:20:58,084 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209073536/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 15:21:20] 2024-05-18 22:20:58,085 | INFO     | extracted standard info from prmon json
[2024-05-18 15:21:20] 2024-05-18 22:20:58,085 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 15:21:20] 2024-05-18 22:20:58,085 | WARNING  | GPU info not found in prmon json
[2024-05-18 15:21:20] 2024-05-18 22:20:58,085 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 15:21:20] 2024-05-18 22:20:58,085 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | fitting pss+swap vs Time
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | model: linear, x: [1716067535.0, 1716067596.0, 1716067657.0, 1716067718.0, 1716067779.0, 1716067840.0, 1716067901.0, 1716067962.0, 1716068023.0, 1716068084.0, 1716
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | sum of square deviations: 46147842.0
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | sum of deviations: 17854663034.000004
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | mean x: 1716069121.0
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | mean y: 2714545.6603773586
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | -- intersect: -663946769777.086
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | intersect: -663946769777.086
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | chi2: 2.1252518098252042
[2024-05-18 15:21:20] 2024-05-18 22:20:58,087 | INFO     | -- intersect: -663946769777.086
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | current memory leak: 386.90 B/s (using 53 data points, chi2=2.13)
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | ..............................
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | . Timing measurements:
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | . get job = 0 s
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | . initial setup = 2 s
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | . payload setup = 5 s
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | . stage-in = 0 s
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | . payload execution = 3621 s
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | . stage-out = 0 s
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | . log creation = 0 s
[2024-05-18 15:21:20] 2024-05-18 22:20:58,088 | INFO     | ..............................
[2024-05-18 15:21:20] 2024-05-18 22:20:58,149 | INFO     | 
[2024-05-18 15:21:20] 2024-05-18 22:20:58,149 | INFO     | job summary report
[2024-05-18 15:21:20] 2024-05-18 22:20:58,149 | INFO     | --------------------------------------------------
[2024-05-18 15:21:20] 2024-05-18 22:20:58,149 | INFO     | PanDA job id: 6209073536
[2024-05-18 15:21:20] 2024-05-18 22:20:58,149 | INFO     | task id: 38776125
[2024-05-18 15:21:20] 2024-05-18 22:20:58,149 | INFO     | errors: (none)
[2024-05-18 15:21:20] 2024-05-18 22:20:58,149 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | pilot state: finished 
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | transexitcode: 0
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | exeerrorcode: 0
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | exeerrordiag: 
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | exitcode: 0
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | exitmsg: OK
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | cpuconsumptiontime: 31474 s
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | nevents: 400
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | neventsw: 0
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | pid: 207851
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | pgrp: 207851
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | corecount: 12
[2024-05-18 15:21:20] 2024-05-18 22:20:58,150 | INFO     | event service: False
[2024-05-18 15:21:20] 2024-05-18 22:20:58,151 | INFO     | sizes: {0: 2390730, 1: 2392263, 5: 2392469, 12: 2392525, 3630: 2418189, 3631: 2418188, 3632: 2427326, 3633: 2427382, 3638: 2427552}
[2024-05-18 15:21:20] 2024-05-18 22:20:58,151 | INFO     | --------------------------------------------------
[2024-05-18 15:21:20] 2024-05-18 22:20:58,151 | INFO     | 
[2024-05-18 15:21:20] 2024-05-18 22:20:58,151 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 15:21:20] 2024-05-18 22:20:58,169 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,169 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,169 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,169 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 15:21:20] 2024-05-18 22:20:58,170 | INFO     | job 6209073536 has completed (purged errors)
[2024-05-18 15:21:20] 2024-05-18 22:20:58,171 | INFO     | overall cleanup function is called
[2024-05-18 15:21:20] 2024-05-18 22:20:59,178 | INFO     | --- collectZombieJob: --- 10, [207851]
[2024-05-18 15:21:20] 2024-05-18 22:20:59,178 | INFO     | zombie collector waiting for pid 207851
[2024-05-18 15:21:20] 2024-05-18 22:20:59,178 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 15:21:20] 2024-05-18 22:21:00,183 | INFO     | collected zombie processes
[2024-05-18 15:21:20] 2024-05-18 22:21:00,183 | INFO     | will now attempt to kill all subprocesses of pid=207851
[2024-05-18 15:21:20] 2024-05-18 22:21:00,348 | INFO     | process IDs to be killed: [207851] (in reverse order)
[2024-05-18 15:21:20] 2024-05-18 22:21:00,422 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 15:21:20] 2024-05-18 22:21:00,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 15:21:20] 2024-05-18 22:21:00,428 | INFO     | did not find any defunct processes belonging to 207851
[2024-05-18 15:21:20] 2024-05-18 22:21:00,432 | INFO     | did not find any defunct processes belonging to 207851
[2024-05-18 15:21:20] 2024-05-18 22:21:00,432 | INFO     | ready for new job
[2024-05-18 15:21:20] 2024-05-18 22:21:00,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 15:21:20] 2024-05-18 22:21:00,433 | INFO     | *************************************
[2024-05-18 15:21:20] 2024-05-18 22:21:00,433 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 15:21:20] 2024-05-18 22:21:00,433 | INFO     | *************************************
[2024-05-18 15:21:20] 2024-05-18 22:21:00,433 | INFO     | 
[2024-05-18 15:21:20] 2024-05-18 22:21:00,436 | INFO     | architecture information:
[2024-05-18 15:21:20] 2024-05-18 22:21:00,436 | INFO     | executing command: cat /etc/os-release
[2024-05-18 15:21:20] 2024-05-18 22:21:00,450 | INFO     | cat /etc/os-release:
[2024-05-18 15:21:20] NAME="CentOS Linux"
[2024-05-18 15:21:20] VERSION="7 (Core)"
[2024-05-18 15:21:20] ID="centos"
[2024-05-18 15:21:20] ID_LIKE="rhel fedora"
[2024-05-18 15:21:20] VERSION_ID="7"
[2024-05-18 15:21:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 15:21:20] ANSI_COLOR="0;31"
[2024-05-18 15:21:20] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 15:21:20] HOME_URL="https://www.centos.org/"
[2024-05-18 15:21:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 15:21:20] 
[2024-05-18 15:21:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 15:21:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 15:21:20] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 15:21:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 15:21:20] 
[2024-05-18 15:21:20] 2024-05-18 22:21:00,450 | INFO     | *************************************
[2024-05-18 15:21:20] 2024-05-18 22:21:00,953 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 15:21:20] 2024-05-18 22:21:00,967 | INFO     | sufficient remaining disk space (2034079105024 B)
[2024-05-18 15:21:20] 2024-05-18 22:21:00,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 15:21:20] 2024-05-18 22:21:00,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 15:21:20] 2024-05-18 22:21:00,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 15:21:20] 2024-05-18 22:21:00,969 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 15:21:20] 2024-05-18 22:21:00,969 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 15:21:20] 2024-05-18 22:21:00,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 15:21:20] 2024-05-18 22:21:00,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 15:21:20] 2024-05-18 22:21:01,116 | INFO     | all payload control threads have been joined
[2024-05-18 15:21:20] 2024-05-18 22:21:01,254 | INFO     | all data control threads have been joined
[2024-05-18 15:21:20] 2024-05-18 22:21:01,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 15:21:20] 2024-05-18 22:21:01,652 | INFO     | aborting loop
[2024-05-18 15:21:20] 2024-05-18 22:21:01,973 | INFO     | [job] retrieve thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:02,003 | INFO     | [job] validate thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:02,017 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:02,122 | INFO     | [payload] control thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:02,130 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:02,259 | INFO     | [data] control thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:02,338 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:02,428 | INFO     | all job control threads have been joined
[2024-05-18 15:21:20] 2024-05-18 22:21:02,491 | INFO     | [payload] failed_post thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:02,653 | INFO     | [job] job monitor thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:02,970 | INFO     | [data] copytool_out thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:03,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 15:21:20] 2024-05-18 22:21:03,302 | INFO     | [data] copytool_in thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:03,433 | INFO     | [job] control thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:03,461 | INFO     | [payload] validate_post thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:03,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 15:21:20] 2024-05-18 22:21:04,165 | INFO     | [job] queue monitor thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:07,506 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:11,130 | INFO     | job.realtimelogging is not enabled
[2024-05-18 15:21:20] 2024-05-18 22:21:12,135 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 15:21:20] 2024-05-18 22:21:14,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140101180155712)>', '<ExcThread(monitor, started 140100625233664)>']
[2024-05-18 15:21:20] 2024-05-18 22:21:15,028 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 15:21:20] 2024-05-18 22:21:15,028 | INFO     | [monitor] control thread has ended
[2024-05-18 15:21:20] 2024-05-18 22:21:19,156 | INFO     | all workflow threads have been joined
[2024-05-18 15:21:20] 2024-05-18 22:21:19,156 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 15:21:20] 2024-05-18 22:21:19,156 | INFO     | traces error code: 0
[2024-05-18 15:21:20] 2024-05-18 22:21:19,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 15:21:20] 2024-05-18 22:21:19,239 [wrapper] ==== pilot stdout END ====
[2024-05-18 15:21:20] 2024-05-18 22:21:19,242 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 15:21:20] 2024-05-18 22:21:19,244 [wrapper] pilotpid: 201192
[2024-05-18 15:21:20] 2024-05-18 22:21:19,246 [wrapper] Pilot exit status: 0
[2024-05-18 15:21:20] 2024-05-18 22:21:19,253 [wrapper] pandaids: 6209073536
[2024-05-18 15:21:20] 2024-05-18 22:21:19,314 [wrapper] cleanup: SIGTERM to supervisor_pilot  68810 201193
[2024-05-18 15:21:20] 2024-05-18 22:21:19,317 [wrapper] Test setup, not cleaning
[2024-05-18 15:21:20] 2024-05-18 22:21:19,319 [wrapper] ==== wrapper stdout END ====
[2024-05-18 15:21:20] 2024-05-18 22:21:19,322 [wrapper] ==== wrapper stderr END ====
[2024-05-18 15:21:20] 2024-05-18 22:21:19,327 [wrapper] apfmon messages muted
[2024-05-18 15:21:20]  *** Error codes and diagnostics ***
[2024-05-18 15:21:20]     "exeErrorCode": 0,
[2024-05-18 15:21:20]     "exeErrorDiag": "",
[2024-05-18 15:21:20]     "pilotErrorCode": 0,
[2024-05-18 15:21:20]     "pilotErrorDiag": "",
[2024-05-18 15:21:20]  *** Listing of results directory ***
[2024-05-18 15:21:20] total 824752
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc    467845 May 18 07:41 pilot3.tar.gz
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc      5633 May 18 07:46 queuedata.json
[2024-05-18 15:21:20] -rwx------ 1 boinc boinc     32251 May 18 07:47 runpilot2-wrapper.sh
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc       100 May 18 14:19 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 15:21:20] -rwxr-xr-x 1 boinc boinc      7986 May 18 14:19 run_atlas
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc       105 May 18 14:19 job.xml
[2024-05-18 15:21:20] -rw-r--r-- 2 boinc boinc 598593659 May 18 14:19 EVNT.38776119._000077.pool.root.1
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc      6627 May 18 14:19 init_data.xml
[2024-05-18 15:21:20] -rw-r--r-- 2 boinc boinc     17537 May 18 14:19 start_atlas.sh
[2024-05-18 15:21:20] drwxrwx--x 2 boinc boinc      4096 May 18 14:19 shared
[2024-05-18 15:21:20] -rw-r--r-- 2 boinc boinc    480012 May 18 14:19 input.tar.gz
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc         0 May 18 14:19 boinc_lockfile
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc      2630 May 18 14:19 pandaJob.out
[2024-05-18 15:21:20] -rw------- 1 boinc boinc       424 May 18 14:19 setup.sh.local
[2024-05-18 15:21:20] -rw------- 1 boinc boinc   1013720 May 18 14:20 agis_schedconf.cvmfs.json
[2024-05-18 15:21:20] -rw------- 1 boinc boinc         0 May 18 14:20 agis_ddmendpoints.agis.ALL.json
[2024-05-18 15:21:20] -rw------- 1 boinc boinc   1324701 May 18 14:20 cric_ddmendpoints.json
[2024-05-18 15:21:20] drwx------ 4 boinc boinc      4096 May 18 14:20 pilot3
[2024-05-18 15:21:20] -rw------- 1 boinc boinc        95 May 18 15:20 pilot_heartbeat.json
[2024-05-18 15:21:20] -rw------- 1 boinc boinc 240990589 May 18 15:20 HITS.38776125._017019.pool.root.1
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc       530 May 18 15:20 boinc_task_state.xml
[2024-05-18 15:21:20] -rw------- 1 boinc boinc      1055 May 18 15:20 memory_monitor_summary.json
[2024-05-18 15:21:20] -rw------- 1 boinc boinc    342003 May 18 15:20 log.38776125._017019.job.log.tgz.1
[2024-05-18 15:21:20] -rw------- 1 boinc boinc      7762 May 18 15:20 heartbeat.json
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc      8192 May 18 15:21 boinc_mmap_file
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc        27 May 18 15:21 wrapper_checkpoint.txt
[2024-05-18 15:21:20] -rw------- 1 boinc boinc      4405 May 18 15:21 pilotlog.txt
[2024-05-18 15:21:20] -rw------- 1 boinc boinc    372029 May 18 15:21 log.38776125._017019.job.log.1
[2024-05-18 15:21:20] -rw------- 1 boinc boinc       357 May 18 15:21 output.list
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc       620 May 18 15:21 runtime_log
[2024-05-18 15:21:20] -rw------- 1 boinc boinc    737280 May 18 15:21 result.tar.gz
[2024-05-18 15:21:20] -rw------- 1 boinc boinc       652 May 18 15:21 ZIvMDm9VaS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmckSKDm1ghgHo.diag
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc     11286 May 18 15:21 runtime_log.err
[2024-05-18 15:21:20] -rw-r--r-- 1 boinc boinc     21557 May 18 15:21 stderr.txt
[2024-05-18 15:21:20] HITS file was successfully produced:
[2024-05-18 15:21:20] -rw------- 1 boinc boinc 240990589 May 18 15:20 shared/HITS.pool.root.1
[2024-05-18 15:21:20]  *** Contents of shared directory: ***
[2024-05-18 15:21:20] total 821132
[2024-05-18 15:21:20] -rw-r--r-- 2 boinc boinc 598593659 May 18 14:19 ATLAS.root_0
[2024-05-18 15:21:20] -rw-r--r-- 2 boinc boinc     17537 May 18 14:19 start_atlas.sh
[2024-05-18 15:21:20] -rw-r--r-- 2 boinc boinc    480012 May 18 14:19 input.tar.gz
[2024-05-18 15:21:20] -rw------- 1 boinc boinc 240990589 May 18 15:20 HITS.pool.root.1
[2024-05-18 15:21:20] -rw------- 1 boinc boinc    737280 May 18 15:21 result.tar.gz
15:21:21 (196929): run_atlas exited; CPU time 31341.045111
15:21:21 (196929): called boinc_finish(0)

</stderr_txt>
]]>

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