Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
14:41:36 (151761): wrapper (7.7.26015): starting
14:41:36 (151761): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 14:41:36] Arguments: --nthreads 12
[2024-05-18 14:41:36] Threads: 12
[2024-05-18 14:41:36] Checking for CVMFS
[2024-05-18 14:41:37] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 14:41:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 14:41:37] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 14:41:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 14:41:37] 2.10.1.0 2809 174213 179584 132891 0 64 27119005 45568000 12184 130560 0 1115604170 99.762 706454807 16550 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 14:41:37] CVMFS is ok
[2024-05-18 14:41:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 14:41:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 14:41:37] Further information can be found at the LHC@home message board.
[2024-05-18 14:41:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 14:41:37] Checking for apptainer binary...
[2024-05-18 14:41:37] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 14:41:37] Running /usr/bin/apptainer --version
[2024-05-18 14:41:37] apptainer version 1.1.8-1.el7
[2024-05-18 14:41:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 14:41:38] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0075.triumf.lcg
[2024-05-18 14:41:38] apptainer works
[2024-05-18 14:41:38] Set ATHENA_PROC_NUMBER=12
[2024-05-18 14:41:38] Set ATHENA_CORE_NUMBER=12
[2024-05-18 14:41:38] Starting ATLAS job with PandaID=6209073371
[2024-05-18 14:41:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 15:40:10]  *** The last 200 lines of the pilot log: ***
[2024-05-18 15:40:10]  direct_access_lan=False
[2024-05-18 15:40:10]  direct_access_wan=False
[2024-05-18 15:40:10]  domain=
[2024-05-18 15:40:10]  filesize=366422
[2024-05-18 15:40:10]  filetype=log
[2024-05-18 15:40:10]  guid=71bbfe0a-6abf-45bc-8173-33af62b6b999
[2024-05-18 15:40:10]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 15:40:10]  is_tar=False
[2024-05-18 15:40:10]  lfn=log.38776125._016872.job.log.tgz.1
[2024-05-18 15:40:10]  mtime=0
[2024-05-18 15:40:10]  protocol_id=None
[2024-05-18 15:40:10]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 15:40:10]  replicas=None
[2024-05-18 15:40:10]  scope=mc23_13p6TeV
[2024-05-18 15:40:10]  status=None
[2024-05-18 15:40:10]  status_code=0
[2024-05-18 15:40:10]  storage_token=
[2024-05-18 15:40:10]  surl=/home/boinc/slots/0/PanDA_Pilot-6209073371/log.38776125._016872.job.log.tgz.1
[2024-05-18 15:40:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/3d/log.38776125._016872.job.log.tgz.1
[2024-05-18 15:40:10]  workdir=None
[2024-05-18 15:40:10] ]
[2024-05-18 15:40:10] 2024-05-18 22:39:47,980 | INFO     | transferring file log.38776125._016872.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6209073371/log.38776125._016872.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 15:40:10] 2024-05-18 22:39:47,980 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6209073371/log.38776125._016872.job.log.tgz.1 /home/boinc/slots/0/log.38776125._016872.job.log.t
[2024-05-18 15:40:10] 2024-05-18 22:39:48,082 | WARNING  | process 164726 is no longer using CPU - aborting
[2024-05-18 15:40:10] 2024-05-18 22:39:48,083 | INFO     | will not send any job update
[2024-05-18 15:40:10] 2024-05-18 22:39:48,110 | INFO     | adding to output.list: log.38776125._016872.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f5/3d/log.38776125._016872.job.log.tg
[2024-05-18 15:40:10] 2024-05-18 22:39:48,112 | INFO     | summary of transferred files:
[2024-05-18 15:40:10] 2024-05-18 22:39:48,112 | INFO     |  -- lfn=log.38776125._016872.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 15:40:10] 2024-05-18 22:39:48,112 | INFO     | stage-out finished correctly
[2024-05-18 15:40:10] 2024-05-18 22:39:48,199 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 15:40:10] 2024-05-18 22:39:48,629 | INFO     | job 6209073371 has state=finished
[2024-05-18 15:40:10] 2024-05-18 22:39:48,629 | INFO     | preparing for final server update for job 6209073371 in state='finished'
[2024-05-18 15:40:10] 2024-05-18 22:39:48,630 | INFO     | this job has now completed (state=finished)
[2024-05-18 15:40:10] 2024-05-18 22:39:48,630 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 15:40:10] 2024-05-18 22:39:48,630 | INFO     | job 6209073371 has finished - writing final server update
[2024-05-18 15:40:10] 2024-05-18 22:39:48,631 | INFO     | total number of processed events: 400 (read)
[2024-05-18 15:40:10] 2024-05-18 22:39:48,637 | INFO     | executing command: lscpu
[2024-05-18 15:40:10] 2024-05-18 22:39:48,707 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 15:40:10] 2024-05-18 22:39:48,707 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 15:40:10] 2024-05-18 22:39:48,768 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 15:40:10] 2024-05-18 22:39:50,586 | INFO     | monitor loop #273: job 0:6209073371 is in state 'finished'
[2024-05-18 15:40:10] 2024-05-18 22:39:50,586 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 15:40:10] 2024-05-18 22:39:52,747 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 15:40:10] 2024-05-18 22:39:52,747 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6209073371/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 15:40:10] 2024-05-18 22:39:52,749 | INFO     | extracted standard info from prmon json
[2024-05-18 15:40:10] 2024-05-18 22:39:52,749 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 15:40:10] 2024-05-18 22:39:52,749 | WARNING  | GPU info not found in prmon json
[2024-05-18 15:40:10] 2024-05-18 22:39:52,749 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 15:40:10] 2024-05-18 22:39:52,750 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 15:40:10] 2024-05-18 22:39:52,752 | INFO     | fitting pss+swap vs Time
[2024-05-18 15:40:10] 2024-05-18 22:39:52,752 | INFO     | model: linear, x: [1716068838.0, 1716068899.0, 1716068960.0, 1716069021.0, 1716069082.0, 1716069143.0, 1716069204.0, 1716069265.0, 1716069326.0, 1716069387.0, 1716
[2024-05-18 15:40:10] 2024-05-18 22:39:52,752 | INFO     | sum of square deviations: 38744912.5
[2024-05-18 15:40:10] 2024-05-18 22:39:52,753 | INFO     | sum of deviations: 13084569235.000002
[2024-05-18 15:40:10] 2024-05-18 22:39:52,753 | INFO     | mean x: 1716070332.5
[2024-05-18 15:40:10] 2024-05-18 22:39:52,753 | INFO     | mean y: 2589011.08
[2024-05-18 15:40:10] 2024-05-18 22:39:52,753 | INFO     | -- intersect: -579532622940.3143
[2024-05-18 15:40:10] 2024-05-18 22:39:52,753 | INFO     | intersect: -579532622940.3143
[2024-05-18 15:40:10] 2024-05-18 22:39:52,753 | INFO     | chi2: 2.170961573990536
[2024-05-18 15:40:10] 2024-05-18 22:39:52,753 | INFO     | -- intersect: -579532622940.3143
[2024-05-18 15:40:10] 2024-05-18 22:39:52,754 | INFO     | current memory leak: 337.71 B/s (using 50 data points, chi2=2.17)
[2024-05-18 15:40:10] 2024-05-18 22:39:52,754 | INFO     | ..............................
[2024-05-18 15:40:10] 2024-05-18 22:39:52,754 | INFO     | . Timing measurements:
[2024-05-18 15:40:10] 2024-05-18 22:39:52,754 | INFO     | . get job = 0 s
[2024-05-18 15:40:10] 2024-05-18 22:39:52,754 | INFO     | . initial setup = 2 s
[2024-05-18 15:40:10] 2024-05-18 22:39:52,755 | INFO     | . payload setup = 5 s
[2024-05-18 15:40:10] 2024-05-18 22:39:52,755 | INFO     | . stage-in = 0 s
[2024-05-18 15:40:10] 2024-05-18 22:39:52,755 | INFO     | . payload execution = 3454 s
[2024-05-18 15:40:10] 2024-05-18 22:39:52,755 | INFO     | . stage-out = 0 s
[2024-05-18 15:40:10] 2024-05-18 22:39:52,755 | INFO     | . log creation = 0 s
[2024-05-18 15:40:10] 2024-05-18 22:39:52,755 | INFO     | ..............................
[2024-05-18 15:40:10] 2024-05-18 22:39:52,944 | INFO     | 
[2024-05-18 15:40:10] 2024-05-18 22:39:52,944 | INFO     | job summary report
[2024-05-18 15:40:10] 2024-05-18 22:39:52,944 | INFO     | --------------------------------------------------
[2024-05-18 15:40:10] 2024-05-18 22:39:52,944 | INFO     | PanDA job id: 6209073371
[2024-05-18 15:40:10] 2024-05-18 22:39:52,944 | INFO     | task id: 38776125
[2024-05-18 15:40:10] 2024-05-18 22:39:52,944 | INFO     | errors: (none)
[2024-05-18 15:40:10] 2024-05-18 22:39:52,944 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | pilot state: finished 
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | transexitcode: 0
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | exeerrorcode: 0
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | exeerrordiag: 
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | exitcode: 0
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | exitmsg: OK
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | cpuconsumptiontime: 30705 s
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | nevents: 400
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | neventsw: 0
[2024-05-18 15:40:10] 2024-05-18 22:39:52,945 | INFO     | pid: 164726
[2024-05-18 15:40:10] 2024-05-18 22:39:52,946 | INFO     | pgrp: 164726
[2024-05-18 15:40:10] 2024-05-18 22:39:52,946 | INFO     | corecount: 12
[2024-05-18 15:40:10] 2024-05-18 22:39:52,946 | INFO     | event service: False
[2024-05-18 15:40:10] 2024-05-18 22:39:52,946 | INFO     | sizes: {0: 2392241, 4: 2392447, 11: 2392475, 3463: 2418085, 3464: 2427095, 3468: 2427209}
[2024-05-18 15:40:10] 2024-05-18 22:39:52,946 | INFO     | --------------------------------------------------
[2024-05-18 15:40:10] 2024-05-18 22:39:52,946 | INFO     | 
[2024-05-18 15:40:10] 2024-05-18 22:39:52,946 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 15:40:10] 2024-05-18 22:39:52,976 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,976 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,976 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,976 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,976 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,977 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,978 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,978 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,978 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 15:40:10] 2024-05-18 22:39:52,978 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,978 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 15:40:10] 2024-05-18 22:39:52,978 | INFO     | job 6209073371 has completed (purged errors)
[2024-05-18 15:40:10] 2024-05-18 22:39:52,978 | INFO     | overall cleanup function is called
[2024-05-18 15:40:10] 2024-05-18 22:39:53,986 | INFO     | --- collectZombieJob: --- 10, [164726]
[2024-05-18 15:40:10] 2024-05-18 22:39:53,986 | INFO     | zombie collector waiting for pid 164726
[2024-05-18 15:40:10] 2024-05-18 22:39:53,986 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 15:40:10] 2024-05-18 22:39:54,991 | INFO     | collected zombie processes
[2024-05-18 15:40:10] 2024-05-18 22:39:54,992 | INFO     | will now attempt to kill all subprocesses of pid=164726
[2024-05-18 15:40:10] 2024-05-18 22:39:55,181 | INFO     | process IDs to be killed: [164726] (in reverse order)
[2024-05-18 15:40:10] 2024-05-18 22:39:55,303 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 15:40:10] 2024-05-18 22:39:55,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 15:40:10] 2024-05-18 22:39:55,312 | INFO     | did not find any defunct processes belonging to 164726
[2024-05-18 15:40:10] 2024-05-18 22:39:55,319 | INFO     | did not find any defunct processes belonging to 164726
[2024-05-18 15:40:10] 2024-05-18 22:39:55,320 | INFO     | ready for new job
[2024-05-18 15:40:10] 2024-05-18 22:39:55,320 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 15:40:10] 2024-05-18 22:39:55,321 | INFO     | *************************************
[2024-05-18 15:40:10] 2024-05-18 22:39:55,321 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 15:40:10] 2024-05-18 22:39:55,322 | INFO     | *************************************
[2024-05-18 15:40:10] 2024-05-18 22:39:55,322 | INFO     | 
[2024-05-18 15:40:10] 2024-05-18 22:39:55,325 | INFO     | architecture information:
[2024-05-18 15:40:10] 2024-05-18 22:39:55,325 | INFO     | executing command: cat /etc/os-release
[2024-05-18 15:40:10] 2024-05-18 22:39:55,350 | INFO     | cat /etc/os-release:
[2024-05-18 15:40:10] NAME="CentOS Linux"
[2024-05-18 15:40:10] VERSION="7 (Core)"
[2024-05-18 15:40:10] ID="centos"
[2024-05-18 15:40:10] ID_LIKE="rhel fedora"
[2024-05-18 15:40:10] VERSION_ID="7"
[2024-05-18 15:40:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 15:40:10] ANSI_COLOR="0;31"
[2024-05-18 15:40:10] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 15:40:10] HOME_URL="https://www.centos.org/"
[2024-05-18 15:40:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 15:40:10] 
[2024-05-18 15:40:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 15:40:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 15:40:10] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 15:40:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 15:40:10] 
[2024-05-18 15:40:10] 2024-05-18 22:39:55,351 | INFO     | *************************************
[2024-05-18 15:40:10] 2024-05-18 22:39:55,854 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 15:40:10] 2024-05-18 22:39:55,881 | INFO     | sufficient remaining disk space (2199138598912 B)
[2024-05-18 15:40:10] 2024-05-18 22:39:55,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 15:40:10] 2024-05-18 22:39:55,882 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 15:40:10] 2024-05-18 22:39:56,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 15:40:10] 2024-05-18 22:39:56,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 15:40:10] 2024-05-18 22:39:56,603 | INFO     | aborting loop
[2024-05-18 15:40:10] 2024-05-18 22:39:56,644 | INFO     | all payload control threads have been joined
[2024-05-18 15:40:10] 2024-05-18 22:39:56,760 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 15:40:10] 2024-05-18 22:39:56,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 15:40:10] 2024-05-18 22:39:56,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 15:40:10] 2024-05-18 22:39:56,823 | INFO     | all data control threads have been joined
[2024-05-18 15:40:10] 2024-05-18 22:39:56,888 | INFO     | [job] retrieve thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:57,016 | INFO     | [payload] failed_post thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:57,115 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:57,397 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:57,401 | INFO     | all job control threads have been joined
[2024-05-18 15:40:10] 2024-05-18 22:39:57,477 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:57,609 | INFO     | [job] job monitor thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:57,646 | INFO     | [payload] control thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:57,811 | INFO     | [payload] validate_post thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:57,829 | INFO     | [data] control thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:57,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 15:40:10] 2024-05-18 22:39:58,172 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:58,219 | INFO     | [data] copytool_out thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:58,221 | INFO     | [job] validate thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:58,371 | INFO     | [data] copytool_in thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:58,407 | INFO     | [job] control thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:39:58,804 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 15:40:10] 2024-05-18 22:39:58,862 | INFO     | [job] queue monitor thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:40:02,813 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 15:40:10] 2024-05-18 22:40:04,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140096297117504)>', '<ExcThread(monitor, started 140096011474688)>']
[2024-05-18 15:40:10] 2024-05-18 22:40:04,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 15:40:10] 2024-05-18 22:40:04,807 | INFO     | [monitor] control thread has ended
[2024-05-18 15:40:10] 2024-05-18 22:40:09,551 | INFO     | all workflow threads have been joined
[2024-05-18 15:40:10] 2024-05-18 22:40:09,551 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 15:40:10] 2024-05-18 22:40:09,552 | INFO     | traces error code: 0
[2024-05-18 15:40:10] 2024-05-18 22:40:09,552 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 15:40:10] 2024-05-18 22:40:09,647 [wrapper] ==== pilot stdout END ====
[2024-05-18 15:40:10] 2024-05-18 22:40:09,651 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 15:40:10] 2024-05-18 22:40:09,655 [wrapper] pilotpid: 155971
[2024-05-18 15:40:10] 2024-05-18 22:40:09,659 [wrapper] Pilot exit status: 0
[2024-05-18 15:40:10] 2024-05-18 22:40:09,671 [wrapper] pandaids: 6209073371
[2024-05-18 15:40:10] 2024-05-18 22:40:09,767 [wrapper] cleanup: SIGTERM to supervisor_pilot 265685 155972
[2024-05-18 15:40:10] 2024-05-18 22:40:09,771 [wrapper] Test setup, not cleaning
[2024-05-18 15:40:10] 2024-05-18 22:40:09,774 [wrapper] ==== wrapper stdout END ====
[2024-05-18 15:40:10] 2024-05-18 22:40:09,778 [wrapper] ==== wrapper stderr END ====
[2024-05-18 15:40:10] 2024-05-18 22:40:09,785 [wrapper] apfmon messages muted
[2024-05-18 15:40:10]  *** Error codes and diagnostics ***
[2024-05-18 15:40:10]     "exeErrorCode": 0,
[2024-05-18 15:40:10]     "exeErrorDiag": "",
[2024-05-18 15:40:10]     "pilotErrorCode": 0,
[2024-05-18 15:40:10]     "pilotErrorDiag": "",
[2024-05-18 15:40:10]  *** Listing of results directory ***
[2024-05-18 15:40:10] total 836324
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc    467845 May 18 07:24 pilot3.tar.gz
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc      5633 May 18 07:25 queuedata.json
[2024-05-18 15:40:10] -rwx------ 1 boinc boinc     32251 May 18 07:26 runpilot2-wrapper.sh
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc       100 May 18 14:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 15:40:10] -rwxr-xr-x 1 boinc boinc      7986 May 18 14:41 run_atlas
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc       105 May 18 14:41 job.xml
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc      6626 May 18 14:41 init_data.xml
[2024-05-18 15:40:10] -rw-r--r-- 2 boinc boinc 603922287 May 18 14:41 EVNT.38776119._000247.pool.root.1
[2024-05-18 15:40:10] -rw-r--r-- 2 boinc boinc     17537 May 18 14:41 start_atlas.sh
[2024-05-18 15:40:10] drwxrwx--x 2 boinc boinc      4096 May 18 14:41 shared
[2024-05-18 15:40:10] -rw-r--r-- 2 boinc boinc    480015 May 18 14:41 input.tar.gz
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc         0 May 18 14:41 boinc_lockfile
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc      2633 May 18 14:41 pandaJob.out
[2024-05-18 15:40:10] -rw------- 1 boinc boinc       424 May 18 14:41 setup.sh.local
[2024-05-18 15:40:10] -rw------- 1 boinc boinc   1013720 May 18 14:41 agis_schedconf.cvmfs.json
[2024-05-18 15:40:10] -rw------- 1 boinc boinc         0 May 18 14:41 agis_ddmendpoints.agis.ALL.json
[2024-05-18 15:40:10] -rw------- 1 boinc boinc   1324701 May 18 14:41 cric_ddmendpoints.json
[2024-05-18 15:40:10] drwx------ 4 boinc boinc      4096 May 18 14:41 pilot3
[2024-05-18 15:40:10] -rw------- 1 boinc boinc 247505734 May 18 15:39 HITS.38776125._016872.pool.root.1
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc        27 May 18 15:39 wrapper_checkpoint.txt
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc      8192 May 18 15:39 boinc_mmap_file
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc       530 May 18 15:39 boinc_task_state.xml
[2024-05-18 15:40:10] -rw------- 1 boinc boinc      1046 May 18 15:39 memory_monitor_summary.json
[2024-05-18 15:40:10] -rw------- 1 boinc boinc    366422 May 18 15:39 log.38776125._016872.job.log.tgz.1
[2024-05-18 15:40:10] -rw------- 1 boinc boinc      7762 May 18 15:39 heartbeat.json
[2024-05-18 15:40:10] -rw------- 1 boinc boinc        95 May 18 15:39 pilot_heartbeat.json
[2024-05-18 15:40:10] -rw------- 1 boinc boinc      4210 May 18 15:40 pilotlog.txt
[2024-05-18 15:40:10] -rw------- 1 boinc boinc    355323 May 18 15:40 log.38776125._016872.job.log.1
[2024-05-18 15:40:10] -rw------- 1 boinc boinc       357 May 18 15:40 output.list
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc       620 May 18 15:40 runtime_log
[2024-05-18 15:40:10] -rw------- 1 boinc boinc    737280 May 18 15:40 result.tar.gz
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc     11286 May 18 15:40 runtime_log.err
[2024-05-18 15:40:10] -rw------- 1 boinc boinc       651 May 18 15:40 JxAODm9BaS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDma3LKDm4ZSjBo.diag
[2024-05-18 15:40:10] -rw-r--r-- 1 boinc boinc     21301 May 18 15:40 stderr.txt
[2024-05-18 15:40:10] HITS file was successfully produced:
[2024-05-18 15:40:10] -rw------- 1 boinc boinc 247505734 May 18 15:39 shared/HITS.pool.root.1
[2024-05-18 15:40:10]  *** Contents of shared directory: ***
[2024-05-18 15:40:10] total 832696
[2024-05-18 15:40:10] -rw-r--r-- 2 boinc boinc 603922287 May 18 14:41 ATLAS.root_0
[2024-05-18 15:40:10] -rw-r--r-- 2 boinc boinc     17537 May 18 14:41 start_atlas.sh
[2024-05-18 15:40:10] -rw-r--r-- 2 boinc boinc    480015 May 18 14:41 input.tar.gz
[2024-05-18 15:40:10] -rw------- 1 boinc boinc 247505734 May 18 15:39 HITS.pool.root.1
[2024-05-18 15:40:10] -rw------- 1 boinc boinc    737280 May 18 15:40 result.tar.gz
15:40:12 (151761): run_atlas exited; CPU time 30600.095006
15:40:12 (151761): called boinc_finish(0)

</stderr_txt>
]]>

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