Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-20 05:05:25 (180850): Detected: vboxwrapper 26206
2024-05-20 05:05:25 (180850): Detected: BOINC client v7.24.1
2024-05-20 05:05:25 (180850): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-05-20 05:05:25 (180850): Successfully copied 'init_data.xml' to the shared directory.
2024-05-20 05:05:25 (180850): Create VM. (boinc_6fb9132038545e81, slot#0)
2024-05-20 05:05:25 (180850): Setting Memory Size for VM. (4400MB)
2024-05-20 05:05:25 (180850): Setting CPU Count for VM. (4)
2024-05-20 05:05:25 (180850): Setting Chipset Options for VM.
2024-05-20 05:05:26 (180850): Setting Graphics Controller Options for VM.
2024-05-20 05:05:26 (180850): Setting Boot Options for VM.
2024-05-20 05:05:26 (180850): Setting Network Configuration for NAT.
2024-05-20 05:05:26 (180850): Enabling VM Network Access.
2024-05-20 05:05:26 (180850): Disabling USB Support for VM.
2024-05-20 05:05:26 (180850): Disabling COM Port Support for VM.
2024-05-20 05:05:26 (180850): Disabling LPT Port Support for VM.
2024-05-20 05:05:27 (180850): Disabling Audio Support for VM.
2024-05-20 05:05:27 (180850): Disabling Clipboard Support for VM.
2024-05-20 05:05:27 (180850): Disabling Drag and Drop Support for VM.
2024-05-20 05:05:27 (180850): Adding storage controller(s) to VM.
2024-05-20 05:05:27 (180850): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-20 05:05:29 (180850): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-20 05:05:29 (180850): forwarding host port 39045 to guest port 80
2024-05-20 05:05:29 (180850): Enabling remote desktop for VM.
2024-05-20 05:05:29 (180850): Required extension pack not installed, remote desktop not enabled.
2024-05-20 05:05:29 (180850): Enabling shared directory for VM.
2024-05-20 05:05:29 (180850): Starting VM using VBoxManage interface. (boinc_6fb9132038545e81, slot#0)
2024-05-20 05:05:30 (180850): Successfully started VM. (PID = '181110')
2024-05-20 05:05:30 (180850): Reporting VM Process ID to BOINC.
2024-05-20 05:05:30 (180850): Guest Log: BIOS: VirtualBox 7.0.18
2024-05-20 05:05:30 (180850): Guest Log: CPUID EDX: 0x178bfbff
2024-05-20 05:05:30 (180850): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-20 05:05:30 (180850): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-20 05:05:30 (180850): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-20 05:05:30 (180850): Detected: Web Application Enabled (http://localhost:39045)
2024-05-20 05:05:30 (180850): Preference change detected
2024-05-20 05:05:30 (180850): Setting CPU throttle for VM. (50%)
2024-05-20 05:05:31 (180850): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-20 05:05:32 (180850): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-20 05:05:32 (180850): Guest Log: BIOS: Booting from Hard Disk...
2024-05-20 05:05:37 (180850): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-20 05:05:37 (180850): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-20 05:05:37 (180850): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-20 05:05:47 (180850): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-20 05:05:47 (180850): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-20 05:06:02 (180850): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-20 05:06:02 (180850): Guest Log: 00:00:00.000151 main     Log opened 2024-05-20T03:06:00.177766000Z
2024-05-20 05:06:02 (180850): Guest Log: 00:00:00.000226 main     OS Product: Linux
2024-05-20 05:06:02 (180850): Guest Log: 00:00:00.000247 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-20 05:06:02 (180850): Guest Log: 00:00:00.000262 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-20 05:06:02 (180850): Guest Log: 00:00:00.000276 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-20 05:06:02 (180850): Guest Log: 00:00:00.000277 main     Process ID: 1292
2024-05-20 05:06:02 (180850): Guest Log: 00:00:00.000277 main     Package type: LINUX_64BITS_GENERIC
2024-05-20 05:06:02 (180850): Guest Log: 00:00:00.001588 main     5.2.32 r132073 started. Verbose level = 0
2024-05-20 05:06:02 (180850): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-20 05:06:02 (180850): Guest Log: [INFO] Mounting shared directory
2024-05-20 05:06:02 (180850): Guest Log: [INFO] Checking for init_data.xml
2024-05-20 05:06:07 (180850): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-20 05:06:07 (180850): Guest Log: [INFO] Detected branch: prod
2024-05-20 05:06:08 (180850): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-20 05:06:08 (180850): Guest Log: Copying input files
2024-05-20 05:06:10 (180850): Guest Log: Copied input files into RunAtlas.
2024-05-20 05:06:10 (180850): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-20 05:06:10 (180850): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-20 05:06:10 (180850): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-20 05:06:10 (180850): Guest Log: Further information can be found at the LHC@home message board.
2024-05-20 05:06:21 (180850): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-20 05:06:22 (180850): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-20 05:06:22 (180850): Guest Log: 2.6.3.0 1587 0 30164 132933 4 1 3116989 4096000 0 65024 0 0 n/a 1 2 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
2024-05-20 05:06:26 (180850): Guest Log: copied the webapp to /var/www
2024-05-20 05:06:26 (180850): Guest Log: ATHENA_PROC_NUMBER=4
2024-05-20 05:06:26 (180850): Guest Log: ATHENA_CORE_NUMBER=4
2024-05-20 05:06:27 (180850): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-20 05:06:27 (180850): Guest Log:  *** Starting ATLAS job. (PandaID=6208790012 taskID=38734053) ***
2024-05-20 06:44:31 (180850): Status Report: Elapsed Time: '6000.000000'
2024-05-20 06:44:31 (180850): Status Report: CPU Time: '8807.630000'
2024-05-20 08:23:32 (180850): Status Report: Elapsed Time: '12000.000000'
2024-05-20 08:23:32 (180850): Status Report: CPU Time: '21179.520000'
2024-05-20 10:02:33 (180850): Status Report: Elapsed Time: '18000.000000'
2024-05-20 10:02:33 (180850): Status Report: CPU Time: '33547.520000'
2024-05-20 11:41:33 (180850): Status Report: Elapsed Time: '24000.000000'
2024-05-20 11:41:33 (180850): Status Report: CPU Time: '45872.490000'
2024-05-20 13:20:34 (180850): Status Report: Elapsed Time: '30000.000000'
2024-05-20 13:20:34 (180850): Status Report: CPU Time: '58224.430000'
2024-05-20 14:59:34 (180850): Status Report: Elapsed Time: '36000.000000'
2024-05-20 14:59:34 (180850): Status Report: CPU Time: '70570.870000'
2024-05-20 16:38:35 (180850): Status Report: Elapsed Time: '42000.000000'
2024-05-20 16:38:35 (180850): Status Report: CPU Time: '82928.010000'
2024-05-20 18:17:36 (180850): Status Report: Elapsed Time: '48000.000000'
2024-05-20 18:17:36 (180850): Status Report: CPU Time: '95278.880000'
2024-05-20 19:56:36 (180850): Status Report: Elapsed Time: '54000.000000'
2024-05-20 19:56:36 (180850): Status Report: CPU Time: '107631.960000'
2024-05-20 21:10:36 (180850): Guest Log:  *** Job finished ***
2024-05-20 21:10:36 (180850): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:20,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:20,585 | INFO     | [job] queue monitor thread has finished
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:24,240 | INFO     | [data] queue_monitor thread has finished
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:26,022 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145817720640)>', '<ExcThread(monitor, started 140144640255744)>']
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:26,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:26,278 | INFO     | [monitor] control thread has ended
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,025 | INFO     | all workflow threads have been joined
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,025 | INFO     | end of generic workflow (traces error code: 0)
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,026 | INFO     | traces error code: 0
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,323 [wrapper] ==== pilot stdout END ====
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,345 [wrapper] ==== wrapper stdout RESUME ====
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,362 [wrapper] pilotpid: 6463
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,379 [wrapper] Pilot exit status: 0
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,435 [wrapper] pandaids: 6208790012
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,507 [wrapper] cleanup: SIGTERM to supervisor_pilot  8528 6464
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,513 [wrapper] Test setup, not cleaning
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,517 [wrapper] ==== wrapper stdout END ====
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,521 [wrapper] ==== wrapper stderr END ====
2024-05-20 21:10:36 (180850): Guest Log: 2024-05-20 19:10:31,530 [wrapper] apfmon messages muted
2024-05-20 21:10:36 (180850): Guest Log:  *** Error codes and diagnostics ***
2024-05-20 21:10:36 (180850): Guest Log:     "exeErrorCode": 0,
2024-05-20 21:10:36 (180850): Guest Log:     "exeErrorDiag": "",
2024-05-20 21:10:36 (180850): Guest Log:     "pilotErrorCode": 0,
2024-05-20 21:10:36 (180850): Guest Log:     "pilotErrorDiag": "",
2024-05-20 21:10:36 (180850): Guest Log:  *** Listing of results directory ***
2024-05-20 21:10:36 (180850): Guest Log: total 1109008
2024-05-20 21:10:36 (180850): Guest Log: -rw-r--r--. 1 atlas atlas     467845 May 18 13:37 pilot3.tar.gz
2024-05-20 21:10:36 (180850): Guest Log: -rw-r--r--. 1 atlas atlas       5633 May 18 13:40 queuedata.json
2024-05-20 21:10:36 (180850): Guest Log: -rwx------. 1 atlas atlas      32251 May 18 13:43 runpilot2-wrapper.sh
2024-05-20 21:10:36 (180850): Guest Log: -rw-r--r--. 1 atlas atlas      17537 May 20 03:06 start_atlas.sh
2024-05-20 21:10:36 (180850): Guest Log: -rw-r--r--. 1 atlas atlas       6643 May 20 03:06 init_data.xml
2024-05-20 21:10:36 (180850): Guest Log: -rw-r--r--. 1 atlas atlas     480181 May 20 03:06 input.tar.gz
2024-05-20 21:10:36 (180850): Guest Log: lrwxrwxrwx. 1 atlas atlas         20 May 20 03:06 EVNT.38734051._000697.pool.root.1 -> /data/./ATLAS.root_0
2024-05-20 21:10:36 (180850): Guest Log: -rw-r--r--. 1 atlas atlas       2852 May 20 03:06 pandaJob.out
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas        424 May 20 03:06 setup.sh.local
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas    1013685 May 20 03:07 agis_schedconf.cvmfs.json
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas    1324701 May 20 03:07 cric_ddmendpoints.json
2024-05-20 21:10:36 (180850): Guest Log: drwx------. 4 atlas atlas       4096 May 20 03:07 pilot3
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas 1118117840 May 20 19:09 HITS.38734053._008646.pool.root.1
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas         95 May 20 19:09 pilot_heartbeat.json
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas       1047 May 20 19:09 memory_monitor_summary.json
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas          0 May 20 19:09 agis_ddmendpoints.agis.ALL.json
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas    1611383 May 20 19:09 log.38734053._008646.job.log.tgz.1
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas      28076 May 20 19:10 heartbeat.json
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas       4394 May 20 19:10 pilotlog.txt
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas    5393410 May 20 19:10 log.38734053._008646.job.log.1
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas        353 May 20 19:10 output.list
2024-05-20 21:10:36 (180850): Guest Log: -rw-r--r--. 1 atlas atlas        620 May 20 19:10 runtime_log
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas    7045120 May 20 19:10 result.tar.gz
2024-05-20 21:10:36 (180850): Guest Log: -rw-r--r--. 1 atlas atlas      10976 May 20 19:10 runtime_log.err
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas        666 May 20 19:10 iVKNDmBWZS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm0gSKDmPnJscn.diag
2024-05-20 21:10:36 (180850): Guest Log: Looking for outputfile HITS.38734053._008646.pool.root.1
2024-05-20 21:10:36 (180850): Guest Log: HITS file was successfully produced
2024-05-20 21:10:36 (180850): Guest Log: -rw-------. 1 atlas atlas 1118117840 May 20 19:09 /home/atlas/RunAtlas/HITS.38734053._008646.pool.root.1
2024-05-20 21:10:36 (180850): Guest Log: Successfully finished the ATLAS job!
2024-05-20 21:10:36 (180850): Guest Log: Copying the results back to the shared directory!
2024-05-20 21:10:37 (180850): Guest Log:  *** Contents of shared directory: ***
2024-05-20 21:10:37 (180850): Guest Log: total 326792
2024-05-20 21:10:37 (180850): Guest Log: -rw-r--r--. 1 root root 327077103 May 20 03:05 ATLAS.root_0
2024-05-20 21:10:37 (180850): Guest Log: -rw-r--r--. 1 root root      6643 May 20 03:05 init_data.xml
2024-05-20 21:10:37 (180850): Guest Log: -rw-r--r--. 1 root root    480181 May 20 03:05 input.tar.gz
2024-05-20 21:10:37 (180850): Guest Log: -rw-r--r--. 1 root root   7045120 May 20 19:10 result.tar.gz
2024-05-20 21:10:37 (180850): Guest Log: -rw-r--r--. 1 root root     17537 May 20 03:05 start_atlas.sh
2024-05-20 21:10:37 (180850): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-20 21:10:37 (180850): VM Completion File Detected.
2024-05-20 21:10:37 (180850): Powering off VM.
2024-05-20 21:10:37 (180850): Successfully stopped VM.
2024-05-20 21:10:37 (180850): Deregistering VM. (boinc_6fb9132038545e81, slot#0)
2024-05-20 21:10:37 (180850): Removing network bandwidth throttle group from VM.
2024-05-20 21:10:37 (180850): Removing VM from VirtualBox.
21:10:43 (180850): called boinc_finish(0)

</stderr_txt>
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