Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
23:04:11 (236492): wrapper (7.7.26015): starting
23:04:11 (236492): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 23:04:11] Arguments: --nthreads 12
[2024-05-18 23:04:11] Threads: 12
[2024-05-18 23:04:11] Checking for CVMFS
[2024-05-18 23:04:12] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 23:04:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 23:04:12] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 23:04:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 23:04:12] 2.9.2.0 165920 185865 124388 132902 2 197 31637917 45568001 5241 130560 0 624818583 99.780 417451048 14035 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-18 23:04:12] CVMFS is ok
[2024-05-18 23:04:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 23:04:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 23:04:12] Further information can be found at the LHC@home message board.
[2024-05-18 23:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 23:04:12] Checking for apptainer binary...
[2024-05-18 23:04:12] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 23:04:12] Running /usr/bin/apptainer --version
[2024-05-18 23:04:12] apptainer version 1.1.8-1.el7
[2024-05-18 23:04:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 23:04:13] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0038.triumf.lcg
[2024-05-18 23:04:13] apptainer works
[2024-05-18 23:04:13] Set ATHENA_PROC_NUMBER=12
[2024-05-18 23:04:13] Set ATHENA_CORE_NUMBER=12
[2024-05-18 23:04:13] Starting ATLAS job with PandaID=6208786210
[2024-05-18 23:04:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 23:56:06]  *** The last 200 lines of the pilot log: ***
[2024-05-18 23:56:06]  guid=aaeb7201-d46d-424e-adef-6eb7253d2fcb
[2024-05-18 23:56:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 23:56:06]  is_tar=False
[2024-05-18 23:56:06]  lfn=log.38776104._017680.job.log.tgz.1
[2024-05-18 23:56:06]  mtime=0
[2024-05-18 23:56:06]  protocol_id=None
[2024-05-18 23:56:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 23:56:06]  replicas=None
[2024-05-18 23:56:06]  scope=mc23_13p6TeV
[2024-05-18 23:56:06]  status=None
[2024-05-18 23:56:06]  status_code=0
[2024-05-18 23:56:06]  storage_token=
[2024-05-18 23:56:06]  surl=/home/boinc/slots/0/PanDA_Pilot-6208786210/log.38776104._017680.job.log.tgz.1
[2024-05-18 23:56:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/56/log.38776104._017680.job.log.tgz.1
[2024-05-18 23:56:06]  workdir=None
[2024-05-18 23:56:06] ]
[2024-05-18 23:56:06] 2024-05-19 06:55:33,990 | INFO     | transferring file log.38776104._017680.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208786210/log.38776104._017680.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 23:56:06] 2024-05-19 06:55:33,990 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208786210/log.38776104._017680.job.log.tgz.1 /home/boinc/slots/0/log.38776104._017680.job.log.t
[2024-05-18 23:56:06] 2024-05-19 06:55:34,021 | INFO     | adding to output.list: log.38776104._017680.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/9a/56/log.38776104._017680.job.log.tg
[2024-05-18 23:56:06] 2024-05-19 06:55:34,021 | INFO     | summary of transferred files:
[2024-05-18 23:56:06] 2024-05-19 06:55:34,022 | INFO     |  -- lfn=log.38776104._017680.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 23:56:06] 2024-05-19 06:55:34,022 | INFO     | stage-out finished correctly
[2024-05-18 23:56:06] 2024-05-19 06:55:36,676 | WARNING  | process 262907 is no longer using CPU - aborting
[2024-05-18 23:56:06] 2024-05-19 06:55:36,677 | INFO     | will not send any job update
[2024-05-18 23:56:06] 2024-05-19 06:55:36,741 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 23:56:06] 2024-05-19 06:55:38,513 | INFO     | job 6208786210 has state=finished
[2024-05-18 23:56:06] 2024-05-19 06:55:38,513 | INFO     | preparing for final server update for job 6208786210 in state='finished'
[2024-05-18 23:56:06] 2024-05-19 06:55:38,514 | INFO     | this job has now completed (state=finished)
[2024-05-18 23:56:06] 2024-05-19 06:55:38,514 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 23:56:06] 2024-05-19 06:55:38,514 | INFO     | job 6208786210 has finished - writing final server update
[2024-05-18 23:56:06] 2024-05-19 06:55:38,514 | INFO     | total number of processed events: 400 (read)
[2024-05-18 23:56:06] 2024-05-19 06:55:38,521 | INFO     | executing command: lscpu
[2024-05-18 23:56:06] 2024-05-19 06:55:38,601 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 23:56:06] 2024-05-19 06:55:38,602 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 23:56:06] 2024-05-19 06:55:38,655 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 23:56:06] 2024-05-19 06:55:39,178 | INFO     | monitor loop #244: job 0:6208786210 is in state 'finished'
[2024-05-18 23:56:06] 2024-05-19 06:55:39,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 23:56:06] 2024-05-19 06:55:41,682 | INFO     | monitor loop #245: job 0:6208786210 is in state 'finished'
[2024-05-18 23:56:06] 2024-05-19 06:55:41,682 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 23:56:06] 2024-05-19 06:55:44,183 | INFO     | monitor loop #246: job 0:6208786210 is in state 'finished'
[2024-05-18 23:56:06] 2024-05-19 06:55:44,184 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 23:56:06] 2024-05-19 06:55:44,591 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 23:56:06] 2024-05-19 06:55:44,592 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208786210/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 23:56:06] 2024-05-19 06:55:44,594 | INFO     | extracted standard info from prmon json
[2024-05-18 23:56:06] 2024-05-19 06:55:44,594 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 23:56:06] 2024-05-19 06:55:44,594 | WARNING  | GPU info not found in prmon json
[2024-05-18 23:56:06] 2024-05-19 06:55:44,595 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 23:56:06] 2024-05-19 06:55:44,595 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 23:56:06] 2024-05-19 06:55:44,597 | INFO     | fitting pss+swap vs Time
[2024-05-18 23:56:06] 2024-05-19 06:55:44,597 | INFO     | model: linear, x: [1716099005.0, 1716099066.0, 1716099127.0, 1716099188.0, 1716099249.0, 1716099310.0, 1716099371.0, 1716099432.0, 1716099493.0, 1716099554.0, 1716
[2024-05-18 23:56:06] 2024-05-19 06:55:44,597 | INFO     | sum of square deviations: 24640462.0
[2024-05-18 23:56:06] 2024-05-19 06:55:44,597 | INFO     | sum of deviations: 15390802579.0
[2024-05-18 23:56:06] 2024-05-19 06:55:44,597 | INFO     | mean x: 1716100286.0
[2024-05-18 23:56:06] 2024-05-19 06:55:44,598 | INFO     | mean y: 2472769.1860465114
[2024-05-18 23:56:06] 2024-05-19 06:55:44,598 | INFO     | -- intersect: -1071899535707.418
[2024-05-18 23:56:06] 2024-05-19 06:55:44,598 | INFO     | intersect: -1071899535707.418
[2024-05-18 23:56:06] 2024-05-19 06:55:44,598 | INFO     | chi2: 2.2235659676326027
[2024-05-18 23:56:06] 2024-05-19 06:55:44,598 | INFO     | -- intersect: -1071899535707.418
[2024-05-18 23:56:06] 2024-05-19 06:55:44,598 | INFO     | current memory leak: 624.62 B/s (using 43 data points, chi2=2.22)
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | ..............................
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | . Timing measurements:
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | . get job = 0 s
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | . initial setup = 2 s
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | . payload setup = 7 s
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | . stage-in = 0 s
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | . payload execution = 3037 s
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | . stage-out = 0 s
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | . log creation = 0 s
[2024-05-18 23:56:06] 2024-05-19 06:55:44,599 | INFO     | ..............................
[2024-05-18 23:56:06] 2024-05-19 06:55:44,678 | INFO     | 
[2024-05-18 23:56:06] 2024-05-19 06:55:44,678 | INFO     | job summary report
[2024-05-18 23:56:06] 2024-05-19 06:55:44,678 | INFO     | --------------------------------------------------
[2024-05-18 23:56:06] 2024-05-19 06:55:44,679 | INFO     | PanDA job id: 6208786210
[2024-05-18 23:56:06] 2024-05-19 06:55:44,679 | INFO     | task id: 38776104
[2024-05-18 23:56:06] 2024-05-19 06:55:44,679 | INFO     | errors: (none)
[2024-05-18 23:56:06] 2024-05-19 06:55:44,679 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 23:56:06] 2024-05-19 06:55:44,679 | INFO     | pilot state: finished 
[2024-05-18 23:56:06] 2024-05-19 06:55:44,679 | INFO     | transexitcode: 0
[2024-05-18 23:56:06] 2024-05-19 06:55:44,679 | INFO     | exeerrorcode: 0
[2024-05-18 23:56:06] 2024-05-19 06:55:44,679 | INFO     | exeerrordiag: 
[2024-05-18 23:56:06] 2024-05-19 06:55:44,680 | INFO     | exitcode: 0
[2024-05-18 23:56:06] 2024-05-19 06:55:44,680 | INFO     | exitmsg: OK
[2024-05-18 23:56:06] 2024-05-19 06:55:44,680 | INFO     | cpuconsumptiontime: 25986 s
[2024-05-18 23:56:06] 2024-05-19 06:55:44,680 | INFO     | nevents: 400
[2024-05-18 23:56:06] 2024-05-19 06:55:44,680 | INFO     | neventsw: 0
[2024-05-18 23:56:06] 2024-05-19 06:55:44,680 | INFO     | pid: 262907
[2024-05-18 23:56:06] 2024-05-19 06:55:44,680 | INFO     | pgrp: 262907
[2024-05-18 23:56:06] 2024-05-19 06:55:44,680 | INFO     | corecount: 12
[2024-05-18 23:56:06] 2024-05-19 06:55:44,680 | INFO     | event service: False
[2024-05-18 23:56:06] 2024-05-19 06:55:44,681 | INFO     | sizes: {0: 2392033, 1: 2392232, 7: 2392438, 11: 2392466, 3048: 2417758, 3049: 2426712, 3051: 2426896, 3059: 2427066}
[2024-05-18 23:56:06] 2024-05-19 06:55:44,681 | INFO     | --------------------------------------------------
[2024-05-18 23:56:06] 2024-05-19 06:55:44,681 | INFO     | 
[2024-05-18 23:56:06] 2024-05-19 06:55:44,681 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 23:56:06] 2024-05-19 06:55:44,715 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,715 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,715 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,715 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | job 6208786210 has completed (purged errors)
[2024-05-18 23:56:06] 2024-05-19 06:55:44,716 | INFO     | overall cleanup function is called
[2024-05-18 23:56:06] 2024-05-19 06:55:45,721 | INFO     | --- collectZombieJob: --- 10, [262907]
[2024-05-18 23:56:06] 2024-05-19 06:55:45,721 | INFO     | zombie collector waiting for pid 262907
[2024-05-18 23:56:06] 2024-05-19 06:55:45,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 23:56:06] 2024-05-19 06:55:46,726 | INFO     | collected zombie processes
[2024-05-18 23:56:06] 2024-05-19 06:55:46,726 | INFO     | will now attempt to kill all subprocesses of pid=262907
[2024-05-18 23:56:06] 2024-05-19 06:55:46,861 | INFO     | process IDs to be killed: [262907] (in reverse order)
[2024-05-18 23:56:06] 2024-05-19 06:55:46,957 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 23:56:06] 2024-05-19 06:55:46,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 23:56:06] 2024-05-19 06:55:46,964 | INFO     | did not find any defunct processes belonging to 262907
[2024-05-18 23:56:06] 2024-05-19 06:55:46,970 | INFO     | did not find any defunct processes belonging to 262907
[2024-05-18 23:56:06] 2024-05-19 06:55:46,970 | INFO     | ready for new job
[2024-05-18 23:56:06] 2024-05-19 06:55:46,970 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 23:56:06] 2024-05-19 06:55:46,972 | INFO     | *************************************
[2024-05-18 23:56:06] 2024-05-19 06:55:46,972 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 23:56:06] 2024-05-19 06:55:46,972 | INFO     | *************************************
[2024-05-18 23:56:06] 2024-05-19 06:55:46,972 | INFO     | 
[2024-05-18 23:56:06] 2024-05-19 06:55:46,976 | INFO     | architecture information:
[2024-05-18 23:56:06] 2024-05-19 06:55:46,976 | INFO     | executing command: cat /etc/os-release
[2024-05-18 23:56:06] 2024-05-19 06:55:47,005 | INFO     | cat /etc/os-release:
[2024-05-18 23:56:06] NAME="CentOS Linux"
[2024-05-18 23:56:06] VERSION="7 (Core)"
[2024-05-18 23:56:06] ID="centos"
[2024-05-18 23:56:06] ID_LIKE="rhel fedora"
[2024-05-18 23:56:06] VERSION_ID="7"
[2024-05-18 23:56:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 23:56:06] ANSI_COLOR="0;31"
[2024-05-18 23:56:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 23:56:06] HOME_URL="https://www.centos.org/"
[2024-05-18 23:56:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 23:56:06] 
[2024-05-18 23:56:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 23:56:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 23:56:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 23:56:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 23:56:06] 
[2024-05-18 23:56:06] 2024-05-19 06:55:47,006 | INFO     | *************************************
[2024-05-18 23:56:06] 2024-05-19 06:55:47,509 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 23:56:06] 2024-05-19 06:55:47,546 | INFO     | sufficient remaining disk space (2065093885952 B)
[2024-05-18 23:56:06] 2024-05-19 06:55:47,546 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 23:56:06] 2024-05-19 06:55:47,547 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 23:56:06] 2024-05-19 06:55:47,547 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 23:56:06] 2024-05-19 06:55:47,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 23:56:06] 2024-05-19 06:55:47,692 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:56:06] 2024-05-19 06:55:47,693 | INFO     | aborting loop
[2024-05-18 23:56:06] 2024-05-19 06:55:47,741 | INFO     | all payload control threads have been joined
[2024-05-18 23:56:06] 2024-05-19 06:55:47,788 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 23:56:06] 2024-05-19 06:55:47,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 23:56:06] 2024-05-19 06:55:47,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 23:56:06] 2024-05-19 06:55:47,878 | INFO     | all job control threads have been joined
[2024-05-18 23:56:06] 2024-05-19 06:55:48,170 | INFO     | all data control threads have been joined
[2024-05-18 23:56:06] 2024-05-19 06:55:48,552 | INFO     | [job] retrieve thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:48,566 | INFO     | [payload] validate_post thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:48,697 | INFO     | [job] job monitor thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:48,747 | INFO     | [payload] control thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:48,883 | INFO     | [job] control thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:49,012 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:49,049 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:49,093 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:49,171 | INFO     | [data] control thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:49,225 | INFO     | [payload] failed_post thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:49,553 | INFO     | [data] copytool_out thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:49,595 | INFO     | [data] copytool_in thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:49,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 23:56:06] 2024-05-19 06:55:49,866 | INFO     | [job] validate thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:50,694 | INFO     | [job] queue monitor thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:51,555 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:55:58,562 | INFO     | job.realtimelogging is not enabled
[2024-05-18 23:56:06] 2024-05-19 06:55:59,568 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 23:56:06] 2024-05-19 06:56:00,329 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140351195760448)>', '<ExcThread(monitor, started 140350765115136)>']
[2024-05-18 23:56:06] 2024-05-19 06:56:00,853 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 23:56:06] 2024-05-19 06:56:00,854 | INFO     | [monitor] control thread has ended
[2024-05-18 23:56:06] 2024-05-19 06:56:05,355 | INFO     | all workflow threads have been joined
[2024-05-18 23:56:06] 2024-05-19 06:56:05,356 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 23:56:06] 2024-05-19 06:56:05,356 | INFO     | traces error code: 0
[2024-05-18 23:56:06] 2024-05-19 06:56:05,357 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 23:56:06] 2024-05-19 06:56:05,451 [wrapper] ==== pilot stdout END ====
[2024-05-18 23:56:06] 2024-05-19 06:56:05,463 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 23:56:06] 2024-05-19 06:56:05,472 [wrapper] pilotpid: 245388
[2024-05-18 23:56:06] 2024-05-19 06:56:05,482 [wrapper] Pilot exit status: 0
[2024-05-18 23:56:06] 2024-05-19 06:56:05,509 [wrapper] pandaids: 6208786210
[2024-05-18 23:56:06] 2024-05-19 06:56:05,587 [wrapper] cleanup: SIGTERM to supervisor_pilot  52350 245389
[2024-05-18 23:56:06] 2024-05-19 06:56:05,597 [wrapper] Test setup, not cleaning
[2024-05-18 23:56:06] 2024-05-19 06:56:05,606 [wrapper] ==== wrapper stdout END ====
[2024-05-18 23:56:06] 2024-05-19 06:56:05,615 [wrapper] ==== wrapper stderr END ====
[2024-05-18 23:56:06] 2024-05-19 06:56:05,628 [wrapper] apfmon messages muted
[2024-05-18 23:56:06]  *** Error codes and diagnostics ***
[2024-05-18 23:56:06]     "exeErrorCode": 0,
[2024-05-18 23:56:06]     "exeErrorDiag": "",
[2024-05-18 23:56:06]     "pilotErrorCode": 0,
[2024-05-18 23:56:06]     "pilotErrorDiag": "",
[2024-05-18 23:56:06]  *** Listing of results directory ***
[2024-05-18 23:56:06] total 809464
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc    467845 May 18 06:10 pilot3.tar.gz
[2024-05-18 23:56:06] -rwx------ 1 boinc boinc     32251 May 18 06:22 runpilot2-wrapper.sh
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc      5633 May 18 06:22 queuedata.json
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc       100 May 18 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 23:56:06] -rwxr-xr-x 1 boinc boinc      7986 May 18 23:04 run_atlas
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc       105 May 18 23:04 job.xml
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc      6628 May 18 23:04 init_data.xml
[2024-05-18 23:56:06] -rw-r--r-- 2 boinc boinc 597861606 May 18 23:04 EVNT.38776100._000567.pool.root.1
[2024-05-18 23:56:06] -rw-r--r-- 2 boinc boinc     17537 May 18 23:04 start_atlas.sh
[2024-05-18 23:56:06] drwxrwx--x 2 boinc boinc      4096 May 18 23:04 shared
[2024-05-18 23:56:06] -rw-r--r-- 2 boinc boinc    480001 May 18 23:04 input.tar.gz
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc         0 May 18 23:04 boinc_lockfile
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc      2644 May 18 23:04 pandaJob.out
[2024-05-18 23:56:06] -rw------- 1 boinc boinc       424 May 18 23:04 setup.sh.local
[2024-05-18 23:56:06] -rw------- 1 boinc boinc   1013987 May 18 23:04 agis_schedconf.cvmfs.json
[2024-05-18 23:56:06] -rw------- 1 boinc boinc         0 May 18 23:04 agis_ddmendpoints.agis.ALL.json
[2024-05-18 23:56:06] -rw------- 1 boinc boinc   1324701 May 18 23:04 cric_ddmendpoints.json
[2024-05-18 23:56:06] drwx------ 4 boinc boinc      4096 May 18 23:04 pilot3
[2024-05-18 23:56:06] -rw------- 1 boinc boinc 226137192 May 18 23:55 HITS.38776104._017680.pool.root.1
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc       531 May 18 23:55 boinc_task_state.xml
[2024-05-18 23:56:06] -rw------- 1 boinc boinc      1047 May 18 23:55 memory_monitor_summary.json
[2024-05-18 23:56:06] -rw------- 1 boinc boinc        95 May 18 23:55 pilot_heartbeat.json
[2024-05-18 23:56:06] -rw------- 1 boinc boinc    356798 May 18 23:55 log.38776104._017680.job.log.tgz.1
[2024-05-18 23:56:06] -rw------- 1 boinc boinc      7769 May 18 23:55 heartbeat.json
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc      8192 May 18 23:55 boinc_mmap_file
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc        27 May 18 23:55 wrapper_checkpoint.txt
[2024-05-18 23:56:06] -rw------- 1 boinc boinc      4282 May 18 23:56 pilotlog.txt
[2024-05-18 23:56:06] -rw------- 1 boinc boinc    323675 May 18 23:56 log.38776104._017680.job.log.1
[2024-05-18 23:56:06] -rw------- 1 boinc boinc       357 May 18 23:56 output.list
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc       620 May 18 23:56 runtime_log
[2024-05-18 23:56:06] -rw------- 1 boinc boinc    696320 May 18 23:56 result.tar.gz
[2024-05-18 23:56:06] -rw------- 1 boinc boinc       655 May 18 23:56 w8kNDm6BZS5nsSi4apGgGQJmABFKDmABFKDm4ySLDm5eSKDmR8pC4m.diag
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc     11286 May 18 23:56 runtime_log.err
[2024-05-18 23:56:06] -rw-r--r-- 1 boinc boinc     21740 May 18 23:56 stderr.txt
[2024-05-18 23:56:06] HITS file was successfully produced:
[2024-05-18 23:56:06] -rw------- 1 boinc boinc 226137192 May 18 23:55 shared/HITS.pool.root.1
[2024-05-18 23:56:06]  *** Contents of shared directory: ***
[2024-05-18 23:56:06] total 805872
[2024-05-18 23:56:06] -rw-r--r-- 2 boinc boinc 597861606 May 18 23:04 ATLAS.root_0
[2024-05-18 23:56:06] -rw-r--r-- 2 boinc boinc     17537 May 18 23:04 start_atlas.sh
[2024-05-18 23:56:06] -rw-r--r-- 2 boinc boinc    480001 May 18 23:04 input.tar.gz
[2024-05-18 23:56:06] -rw------- 1 boinc boinc 226137192 May 18 23:55 HITS.pool.root.1
[2024-05-18 23:56:06] -rw------- 1 boinc boinc    696320 May 18 23:56 result.tar.gz
23:56:07 (236492): run_atlas exited; CPU time 25875.790739
23:56:07 (236492): called boinc_finish(0)

</stderr_txt>
]]>

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