Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:29:24 (1699335): wrapper (7.7.26015): starting
08:29:24 (1699335): wrapper: running run_atlas (--nthreads 4)
[2024-05-21 08:29:24] Arguments: --nthreads 4
[2024-05-21 08:29:24] Threads: 4
[2024-05-21 08:29:24] Checking for CVMFS
[2024-05-21 08:29:24] No cvmfs_config command found, will try listing directly
[2024-05-21 08:29:24] CVMFS is ok
[2024-05-21 08:29:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-21 08:29:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-21 08:29:24] Further information can be found at the LHC@home message board.
[2024-05-21 08:29:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-21 08:29:24] Checking for apptainer binary...
[2024-05-21 08:29:24] which: no apptainer in ((null))
[2024-05-21 08:29:24] apptainer is not installed, using version from CVMFS
[2024-05-21 08:29:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-21 08:29:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2024-05-21 08:29:25] apptainer works
[2024-05-21 08:29:25] Set ATHENA_PROC_NUMBER=4
[2024-05-21 08:29:25] Set ATHENA_CORE_NUMBER=4
[2024-05-21 08:29:25] Starting ATLAS job with PandaID=6208785918
[2024-05-21 08:29:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-21 11:10:19]  *** The last 200 lines of the pilot log: ***
[2024-05-21 11:10:19] 2024-05-21 09:10:02,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-21 11:10:19] 2024-05-21 09:10:02,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-21 11:10:19] 2024-05-21 09:10:02,483 | INFO     | fitting pss+swap vs Time
[2024-05-21 11:10:19] 2024-05-21 09:10:02,483 | INFO     | model: linear, x: [1716273007.0, 1716273068.0, 1716273129.0, 1716273190.0, 1716273251.0, 1716273312.0, 1716273373.0, 1716273434.0, 1716273495.0, 1716273556.0, 1716
[2024-05-21 11:10:19] 2024-05-21 09:10:02,484 | INFO     | sum of square deviations: 1223016419.5
[2024-05-21 11:10:19] 2024-05-21 09:10:02,484 | INFO     | sum of deviations: 56979944846.49999
[2024-05-21 11:10:19] 2024-05-21 09:10:02,484 | INFO     | mean x: 1716277795.5
[2024-05-21 11:10:19] 2024-05-21 09:10:02,485 | INFO     | mean y: 2259570.360759494
[2024-05-21 11:10:19] 2024-05-21 09:10:02,485 | INFO     | -- intersect: -79958575435.30743
[2024-05-21 11:10:19] 2024-05-21 09:10:02,485 | INFO     | intersect: -79958575435.30743
[2024-05-21 11:10:19] 2024-05-21 09:10:02,485 | INFO     | chi2: 4.937240182109668
[2024-05-21 11:10:19] 2024-05-21 09:10:02,485 | INFO     | model: linear, x: [1716273007.0, 1716273068.0, 1716273129.0, 1716273190.0, 1716273251.0, 1716273312.0, 1716273373.0, 1716273434.0, 1716273495.0, 1716273556.0, 1716
[2024-05-21 11:10:19] 2024-05-21 09:10:02,485 | INFO     | sum of square deviations: 1110539892.0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,486 | INFO     | sum of deviations: 64913339648.99999
[2024-05-21 11:10:19] 2024-05-21 09:10:02,486 | INFO     | mean x: 1716277643.0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,486 | INFO     | mean y: 2269977.3790849675
[2024-05-21 11:10:19] 2024-05-21 09:10:02,486 | INFO     | -- intersect: -100317686446.16211
[2024-05-21 11:10:19] 2024-05-21 09:10:02,486 | INFO     | intersect: -100317686446.16211
[2024-05-21 11:10:19] 2024-05-21 09:10:02,487 | INFO     | chi2: 4.153641725849032
[2024-05-21 11:10:19] 2024-05-21 09:10:02,487 | INFO     | current chi2=4.153641725849032 (change=15.871183644256226 %)
[2024-05-21 11:10:19] 2024-05-21 09:10:02,487 | INFO     | right removable region: 152
[2024-05-21 11:10:19] 2024-05-21 09:10:02,487 | INFO     | model: linear, x: [1716273312.0, 1716273373.0, 1716273434.0, 1716273495.0, 1716273556.0, 1716273617.0, 1716273678.0, 1716273739.0, 1716273800.0, 1716273861.0, 1716
[2024-05-21 11:10:19] 2024-05-21 09:10:02,487 | INFO     | sum of square deviations: 1110539892.0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,488 | INFO     | sum of deviations: 20894648237.0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,488 | INFO     | mean x: 1716277948.0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,488 | INFO     | mean y: 2308323.052287582
[2024-05-21 11:10:19] 2024-05-21 09:10:02,488 | INFO     | -- intersect: -32289214258.632854
[2024-05-21 11:10:19] 2024-05-21 09:10:02,488 | INFO     | intersect: -32289214258.632854
[2024-05-21 11:10:19] 2024-05-21 09:10:02,488 | INFO     | chi2: 2.4183394214121994
[2024-05-21 11:10:19] 2024-05-21 09:10:02,488 | INFO     | current chi2=2.4183394214121994 (change=51.018396265687635 %)
[2024-05-21 11:10:19] 2024-05-21 09:10:02,489 | INFO     | model: linear, x: [1716273617.0, 1716273678.0, 1716273739.0, 1716273800.0, 1716273861.0, 1716273922.0, 1716273983.0, 1716274044.0, 1716274105.0, 1716274166.0, 1716
[2024-05-21 11:10:19] 2024-05-21 09:10:02,489 | INFO     | sum of square deviations: 1005179777.0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,490 | INFO     | sum of deviations: -8389621580.0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,490 | INFO     | mean x: 1716278100.5
[2024-05-21 11:10:19] 2024-05-21 09:10:02,490 | INFO     | mean y: 2350723.918918919
[2024-05-21 11:10:19] 2024-05-21 09:10:02,490 | INFO     | -- intersect: 14327075632.542114
[2024-05-21 11:10:19] 2024-05-21 09:10:02,490 | INFO     | intersect: 14327075632.542114
[2024-05-21 11:10:19] 2024-05-21 09:10:02,490 | INFO     | chi2: 0.894969644241933
[2024-05-21 11:10:19] 2024-05-21 09:10:02,490 | INFO     | current chi2=0.894969644241933 (change=62.99238906177563 %)
[2024-05-21 11:10:19] 2024-05-21 09:10:02,490 | INFO     | model: linear, x: [1716273922.0, 1716273983.0, 1716274044.0, 1716274105.0, 1716274166.0, 1716274227.0, 1716274288.0, 1716274349.0, 1716274410.0, 1716274471.0, 1716
[2024-05-21 11:10:19] 2024-05-21 09:10:02,490 | INFO     | sum of square deviations: 906703512.0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,491 | INFO     | sum of deviations: -12255428137.999996
[2024-05-21 11:10:19] 2024-05-21 09:10:02,491 | INFO     | mean x: 1716278253.0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,491 | INFO     | mean y: 2356607.2657342656
[2024-05-21 11:10:19] 2024-05-21 09:10:02,491 | INFO     | -- intersect: 23200375051.087177
[2024-05-21 11:10:19] 2024-05-21 09:10:02,492 | INFO     | intersect: 23200375051.087177
[2024-05-21 11:10:19] 2024-05-21 09:10:02,492 | INFO     | chi2: 0.8363721695133007
[2024-05-21 11:10:19] 2024-05-21 09:10:02,492 | INFO     | current chi2=0.8363721695133007 (change=6.547425949655105 %)
[2024-05-21 11:10:19] 2024-05-21 09:10:02,492 | INFO     | left removable region: 30
[2024-05-21 11:10:19] 2024-05-21 09:10:02,492 | INFO     | model: linear, x: [1716274837.0, 1716274898.0, 1716274959.0, 1716275020.0, 1716275081.0, 1716275142.0, 1716275203.0, 1716275264.0, 1716275325.0, 1716275386.0, 1716
[2024-05-21 11:10:19] 2024-05-21 09:10:02,492 | INFO     | sum of square deviations: 563026370.5
[2024-05-21 11:10:19] 2024-05-21 09:10:02,493 | INFO     | sum of deviations: -1317618391.4999995
[2024-05-21 11:10:19] 2024-05-21 09:10:02,493 | INFO     | mean x: 1716278527.5
[2024-05-21 11:10:19] 2024-05-21 09:10:02,493 | INFO     | mean y: 2368405.368852459
[2024-05-21 11:10:19] 2024-05-21 09:10:02,493 | INFO     | -- intersect: 4018876816.4443116
[2024-05-21 11:10:19] 2024-05-21 09:10:02,493 | INFO     | intersect: 4018876816.4443116
[2024-05-21 11:10:19] 2024-05-21 09:10:02,493 | INFO     | chi2: 0.004976315742073256
[2024-05-21 11:10:19] 2024-05-21 09:10:02,493 | INFO     | -- intersect: 4018876816.4443116
[2024-05-21 11:10:19] 2024-05-21 09:10:02,493 | INFO     | current memory leak: -2.34 B/s (using 122 data points, chi2=0.00)
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | ..............................
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | . Timing measurements:
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | . get job = 0 s
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | . initial setup = 1 s
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | . payload setup = 7 s
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | . stage-in = 0 s
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | . payload execution = 9590 s
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | . stage-out = 0 s
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | . log creation = 0 s
[2024-05-21 11:10:19] 2024-05-21 09:10:02,494 | INFO     | ..............................
[2024-05-21 11:10:19] 2024-05-21 09:10:02,551 | INFO     | 
[2024-05-21 11:10:19] 2024-05-21 09:10:02,551 | INFO     | job summary report
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | --------------------------------------------------
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | PanDA job id: 6208785918
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | task id: 38744235
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | errors: (none)
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | pilot state: finished 
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | transexitcode: 0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | exeerrorcode: 0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | exeerrordiag: 
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | exitcode: 0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | exitmsg: OK
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | cpuconsumptiontime: 35719 s
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | nevents: 400
[2024-05-21 11:10:19] 2024-05-21 09:10:02,552 | INFO     | neventsw: 0
[2024-05-21 11:10:19] 2024-05-21 09:10:02,553 | INFO     | pid: 1717774
[2024-05-21 11:10:19] 2024-05-21 09:10:02,553 | INFO     | pgrp: 1717774
[2024-05-21 11:10:19] 2024-05-21 09:10:02,553 | INFO     | corecount: 4
[2024-05-21 11:10:19] 2024-05-21 09:10:02,553 | INFO     | event service: False
[2024-05-21 11:10:19] 2024-05-21 09:10:02,553 | INFO     | sizes: {0: 2391953, 1: 2392152, 6: 2392358, 11: 2392386, 9601: 2420760, 9603: 2429926, 9608: 2430040}
[2024-05-21 11:10:19] 2024-05-21 09:10:02,553 | INFO     | --------------------------------------------------
[2024-05-21 11:10:19] 2024-05-21 09:10:02,553 | INFO     | 
[2024-05-21 11:10:19] 2024-05-21 09:10:02,553 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/1
[2024-05-21 11:10:19] 2024-05-21 09:10:02,573 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,573 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,573 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,573 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,575 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-21 11:10:19] 2024-05-21 09:10:02,575 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,575 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-21 11:10:19] 2024-05-21 09:10:02,575 | INFO     | job 6208785918 has completed (purged errors)
[2024-05-21 11:10:19] 2024-05-21 09:10:02,575 | INFO     | overall cleanup function is called
[2024-05-21 11:10:19] 2024-05-21 09:10:03,583 | INFO     | --- collectZombieJob: --- 10, [1717774]
[2024-05-21 11:10:19] 2024-05-21 09:10:03,583 | INFO     | zombie collector waiting for pid 1717774
[2024-05-21 11:10:19] 2024-05-21 09:10:03,583 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-21 11:10:19] 2024-05-21 09:10:04,588 | INFO     | collected zombie processes
[2024-05-21 11:10:19] 2024-05-21 09:10:04,589 | INFO     | will now attempt to kill all subprocesses of pid=1717774
[2024-05-21 11:10:19] 2024-05-21 09:10:04,807 | INFO     | process IDs to be killed: [1717774] (in reverse order)
[2024-05-21 11:10:19] 2024-05-21 09:10:04,940 | WARNING  | found no corresponding commands to process id(s)
[2024-05-21 11:10:19] 2024-05-21 09:10:04,940 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-21 11:10:19] 2024-05-21 09:10:04,955 | INFO     | did not find any defunct processes belonging to 1717774
[2024-05-21 11:10:19] 2024-05-21 09:10:04,964 | INFO     | 9629s have passed since pilot start
[2024-05-21 11:10:19] 2024-05-21 09:10:04,968 | INFO     | did not find any defunct processes belonging to 1717774
[2024-05-21 11:10:19] 2024-05-21 09:10:04,968 | INFO     | ready for new job
[2024-05-21 11:10:19] 2024-05-21 09:10:04,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-21 11:10:19] 2024-05-21 09:10:04,969 | INFO     | *************************************
[2024-05-21 11:10:19] 2024-05-21 09:10:04,969 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-21 11:10:19] 2024-05-21 09:10:04,969 | INFO     | *************************************
[2024-05-21 11:10:19] 2024-05-21 09:10:04,969 | INFO     | 
[2024-05-21 11:10:19] 2024-05-21 09:10:04,974 | INFO     | architecture information:
[2024-05-21 11:10:19] 2024-05-21 09:10:04,974 | INFO     | executing command: cat /etc/os-release
[2024-05-21 11:10:19] 2024-05-21 09:10:04,992 | INFO     | cat /etc/os-release:
[2024-05-21 11:10:19] NAME="CentOS Linux"
[2024-05-21 11:10:19] VERSION="7 (Core)"
[2024-05-21 11:10:19] ID="centos"
[2024-05-21 11:10:19] ID_LIKE="rhel fedora"
[2024-05-21 11:10:19] VERSION_ID="7"
[2024-05-21 11:10:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-21 11:10:19] ANSI_COLOR="0;31"
[2024-05-21 11:10:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-21 11:10:19] HOME_URL="https://www.centos.org/"
[2024-05-21 11:10:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-21 11:10:19] 
[2024-05-21 11:10:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-21 11:10:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-21 11:10:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-21 11:10:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-21 11:10:19] 
[2024-05-21 11:10:19] 2024-05-21 09:10:04,992 | INFO     | *************************************
[2024-05-21 11:10:19] 2024-05-21 09:10:05,495 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/1
[2024-05-21 11:10:19] 2024-05-21 09:10:05,512 | INFO     | sufficient remaining disk space (3096083169280 B)
[2024-05-21 11:10:19] 2024-05-21 09:10:05,512 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-21 11:10:19] 2024-05-21 09:10:05,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-21 11:10:19] 2024-05-21 09:10:05,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-21 11:10:19] 2024-05-21 09:10:05,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-21 11:10:19] 2024-05-21 09:10:05,643 | INFO     | aborting loop
[2024-05-21 11:10:19] 2024-05-21 09:10:05,931 | INFO     | all data control threads have been joined
[2024-05-21 11:10:19] 2024-05-21 09:10:05,970 | INFO     | found 0 job(s) in 20 queues
[2024-05-21 11:10:19] 2024-05-21 09:10:05,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-21 11:10:19] 2024-05-21 09:10:05,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-21 11:10:19] 2024-05-21 09:10:06,408 | INFO     | all payload control threads have been joined
[2024-05-21 11:10:19] 2024-05-21 09:10:06,515 | INFO     | [job] retrieve thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:06,648 | INFO     | [job] job monitor thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:06,714 | INFO     | [payload] validate_pre thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:06,739 | INFO     | [payload] execute_payloads thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:06,925 | INFO     | all job control threads have been joined
[2024-05-21 11:10:19] 2024-05-21 09:10:06,934 | INFO     | [data] control thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:06,942 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:07,333 | INFO     | [job] validate thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:07,413 | INFO     | [payload] control thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:07,515 | INFO     | [payload] validate_post thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:07,518 | INFO     | [data] copytool_out thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:07,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-21 11:10:19] 2024-05-21 09:10:07,604 | INFO     | [data] copytool_in thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:07,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-21 11:10:19] 2024-05-21 09:10:07,673 | INFO     | [payload] failed_post thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:07,930 | INFO     | [job] control thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:07,985 | INFO     | [job] create_data_payload thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:08,564 | INFO     | [job] queue monitor thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:11,656 | INFO     | [data] queue_monitor thread has finished
[2024-05-21 11:10:19] 2024-05-21 09:10:13,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47788617995328)>', '<ExcThread(monitor, started 47788789245696)>']
[2024-05-21 11:10:19] 2024-05-21 09:10:14,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-21 11:10:19] 2024-05-21 09:10:14,011 | INFO     | [monitor] control thread has ended
[2024-05-21 11:10:19] 2024-05-21 09:10:18,336 | INFO     | all workflow threads have been joined
[2024-05-21 11:10:19] 2024-05-21 09:10:18,336 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-21 11:10:19] 2024-05-21 09:10:18,336 | INFO     | traces error code: 0
[2024-05-21 11:10:19] 2024-05-21 09:10:18,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-21 11:10:19] 2024-05-21 09:10:18,408 [wrapper] ==== pilot stdout END ====
[2024-05-21 11:10:19] 2024-05-21 09:10:18,410 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-21 11:10:19] 2024-05-21 09:10:18,412 [wrapper] pilotpid: 1704347
[2024-05-21 11:10:19] 2024-05-21 09:10:18,415 [wrapper] Pilot exit status: 0
[2024-05-21 11:10:19] 2024-05-21 09:10:18,422 [wrapper] pandaids: 6208785918
[2024-05-21 11:10:19] 2024-05-21 09:10:18,512 [wrapper] cleanup: SIGTERM to supervisor_pilot 2516118 1704348
[2024-05-21 11:10:19] 2024-05-21 09:10:18,514 [wrapper] Test setup, not cleaning
[2024-05-21 11:10:19] 2024-05-21 09:10:18,517 [wrapper] ==== wrapper stdout END ====
[2024-05-21 11:10:19] 2024-05-21 09:10:18,519 [wrapper] ==== wrapper stderr END ====
[2024-05-21 11:10:19] 2024-05-21 09:10:18,524 [wrapper] apfmon messages muted
[2024-05-21 11:10:19]  *** Error codes and diagnostics ***
[2024-05-21 11:10:19]     "exeErrorCode": 0,
[2024-05-21 11:10:19]     "exeErrorDiag": "",
[2024-05-21 11:10:19]     "pilotErrorCode": 0,
[2024-05-21 11:10:19]     "pilotErrorDiag": "",
[2024-05-21 11:10:19]  *** Listing of results directory ***
[2024-05-21 11:10:19] total 863192
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc    467845 May 18 14:46 pilot3.tar.gz
[2024-05-21 11:10:19] -rwx------ 1 boinc boinc     32251 May 18 15:01 runpilot2-wrapper.sh
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc      5633 May 18 15:01 queuedata.json
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc       100 May 21 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-21 11:10:19] -rwxr-xr-x 1 boinc boinc      7986 May 21 08:29 run_atlas
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc       105 May 21 08:29 job.xml
[2024-05-21 11:10:19] -rw-r--r-- 2 boinc boinc 623234398 May 21 08:29 EVNT.38744233._000022.pool.root.1
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc      6644 May 21 08:29 init_data.xml
[2024-05-21 11:10:19] -rw-r--r-- 2 boinc boinc     17537 May 21 08:29 start_atlas.sh
[2024-05-21 11:10:19] drwxrwx--x 2 boinc boinc      4096 May 21 08:29 shared
[2024-05-21 11:10:19] -rw-r--r-- 2 boinc boinc    479985 May 21 08:29 input.tar.gz
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc         0 May 21 08:29 boinc_lockfile
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc      2537 May 21 08:29 pandaJob.out
[2024-05-21 11:10:19] -rw------- 1 boinc boinc       424 May 21 08:29 setup.sh.local
[2024-05-21 11:10:19] -rw------- 1 boinc boinc   1013555 May 21 08:29 agis_schedconf.cvmfs.json
[2024-05-21 11:10:19] -rw------- 1 boinc boinc         0 May 21 08:29 agis_ddmendpoints.agis.ALL.json
[2024-05-21 11:10:19] -rw------- 1 boinc boinc   1324701 May 21 08:29 cric_ddmendpoints.json
[2024-05-21 11:10:19] drwx------ 4 boinc boinc      4096 May 21 08:29 pilot3
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc       530 May 21 11:09 boinc_task_state.xml
[2024-05-21 11:10:19] -rw------- 1 boinc boinc 254542046 May 21 11:09 HITS.38744235._001778.pool.root.1
[2024-05-21 11:10:19] -rw------- 1 boinc boinc      1039 May 21 11:09 memory_monitor_summary.json
[2024-05-21 11:10:19] -rw------- 1 boinc boinc    308747 May 21 11:09 log.38744235._001778.job.log.tgz.1
[2024-05-21 11:10:19] -rw------- 1 boinc boinc      7711 May 21 11:10 heartbeat.json
[2024-05-21 11:10:19] -rw------- 1 boinc boinc        95 May 21 11:10 pilot_heartbeat.json
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc      8192 May 21 11:10 boinc_mmap_file
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc        26 May 21 11:10 wrapper_checkpoint.txt
[2024-05-21 11:10:19] -rw------- 1 boinc boinc      4222 May 21 11:10 pilotlog.txt
[2024-05-21 11:10:19] -rw------- 1 boinc boinc    991138 May 21 11:10 log.38744235._001778.job.log.1
[2024-05-21 11:10:19] -rw------- 1 boinc boinc       357 May 21 11:10 output.list
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc       620 May 21 11:10 runtime_log
[2024-05-21 11:10:19] -rw------- 1 boinc boinc   1320960 May 21 11:10 result.tar.gz
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc     11409 May 21 11:10 runtime_log.err
[2024-05-21 11:10:19] -rw------- 1 boinc boinc       656 May 21 11:10 UZLLDmEsYS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmFdSKDmhHuFPn.diag
[2024-05-21 11:10:19] -rw-r--r-- 1 boinc boinc     21277 May 21 11:10 stderr.txt
[2024-05-21 11:10:19] HITS file was successfully produced:
[2024-05-21 11:10:19] -rw------- 1 boinc boinc 254542046 May 21 11:09 shared/HITS.pool.root.1
[2024-05-21 11:10:19]  *** Contents of shared directory: ***
[2024-05-21 11:10:19] total 859000
[2024-05-21 11:10:19] -rw-r--r-- 2 boinc boinc 623234398 May 21 08:29 ATLAS.root_0
[2024-05-21 11:10:19] -rw-r--r-- 2 boinc boinc     17537 May 21 08:29 start_atlas.sh
[2024-05-21 11:10:19] -rw-r--r-- 2 boinc boinc    479985 May 21 08:29 input.tar.gz
[2024-05-21 11:10:19] -rw------- 1 boinc boinc 254542046 May 21 11:09 HITS.pool.root.1
[2024-05-21 11:10:19] -rw------- 1 boinc boinc   1320960 May 21 11:10 result.tar.gz
11:10:20 (1699335): run_atlas exited; CPU time 35521.632792
11:10:20 (1699335): called boinc_finish(0)

</stderr_txt>
]]>

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