Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:17:10 (2736717): wrapper (7.7.26015): starting
12:17:10 (2736717): wrapper: running run_atlas (--nthreads 12)
[2024-05-20 12:17:10] Arguments: --nthreads 12
[2024-05-20 12:17:10] Threads: 12
[2024-05-20 12:17:10] Checking for CVMFS
[2024-05-20 12:17:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-20 12:17:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-20 12:17:10] Running cvmfs_config stat atlas.cern.ch
[2024-05-20 12:17:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-20 12:17:10] 2.11.3.0 11199 15868 109596 132947 2 55 44887008 46080001 911 130560 0 22068433 99.965 2393510 38217 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-20 12:17:10] CVMFS is ok
[2024-05-20 12:17:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 12:17:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 12:17:10] Further information can be found at the LHC@home message board.
[2024-05-20 12:17:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 12:17:10] Checking for apptainer binary...
[2024-05-20 12:17:10] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-20 12:17:10] Running /usr/bin/apptainer --version
[2024-05-20 12:17:10] apptainer version 1.3.1-1.el7
[2024-05-20 12:17:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 12:17:10] minis01.farm.particle.cz
[2024-05-20 12:17:10] apptainer works
[2024-05-20 12:17:10] Set ATHENA_PROC_NUMBER=12
[2024-05-20 12:17:10] Set ATHENA_CORE_NUMBER=12
[2024-05-20 12:17:10] Starting ATLAS job with PandaID=6208730881
[2024-05-20 12:17:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 13:26:31]  *** The last 200 lines of the pilot log: ***
[2024-05-20 13:26:31]  direct_access_lan=False
[2024-05-20 13:26:31]  direct_access_wan=False
[2024-05-20 13:26:31]  domain=
[2024-05-20 13:26:31]  filesize=362154
[2024-05-20 13:26:31]  filetype=log
[2024-05-20 13:26:31]  guid=7e6d677f-9741-45bb-8ff7-6a9a832fa323
[2024-05-20 13:26:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-20 13:26:31]  is_tar=False
[2024-05-20 13:26:31]  lfn=log.38776104._017448.job.log.tgz.1
[2024-05-20 13:26:31]  mtime=0
[2024-05-20 13:26:31]  protocol_id=None
[2024-05-20 13:26:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-20 13:26:31]  replicas=None
[2024-05-20 13:26:31]  scope=mc23_13p6TeV
[2024-05-20 13:26:31]  status=None
[2024-05-20 13:26:31]  status_code=0
[2024-05-20 13:26:31]  storage_token=
[2024-05-20 13:26:31]  surl=/scratch/.boinc/slots/1/PanDA_Pilot-6208730881/log.38776104._017448.job.log.tgz.1
[2024-05-20 13:26:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/4b/log.38776104._017448.job.log.tgz.1
[2024-05-20 13:26:31]  workdir=None
[2024-05-20 13:26:31] ]
[2024-05-20 13:26:31] 2024-05-20 11:26:04,018 | INFO     | transferring file log.38776104._017448.job.log.tgz.1 from /scratch/.boinc/slots/1/PanDA_Pilot-6208730881/log.38776104._017448.job.log.tgz.1 to /scratch/.boinc/slot
[2024-05-20 13:26:31] 2024-05-20 11:26:04,018 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/1/PanDA_Pilot-6208730881/log.38776104._017448.job.log.tgz.1 /scratch/.boinc/slots/1/log.38776104._017448.j
[2024-05-20 13:26:31] 2024-05-20 11:26:04,032 | INFO     | adding to output.list: log.38776104._017448.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4c/4b/log.38776104._017448.job.log.tg
[2024-05-20 13:26:31] 2024-05-20 11:26:04,033 | INFO     | summary of transferred files:
[2024-05-20 13:26:31] 2024-05-20 11:26:04,033 | INFO     |  -- lfn=log.38776104._017448.job.log.tgz.1, status_code=0, status=transferred
[2024-05-20 13:26:31] 2024-05-20 11:26:04,033 | INFO     | stage-out finished correctly
[2024-05-20 13:26:31] 2024-05-20 11:26:05,018 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-20 13:26:31] 2024-05-20 11:26:06,604 | INFO     | job 6208730881 has state=finished
[2024-05-20 13:26:31] 2024-05-20 11:26:06,604 | INFO     | preparing for final server update for job 6208730881 in state='finished'
[2024-05-20 13:26:31] 2024-05-20 11:26:06,604 | INFO     | this job has now completed (state=finished)
[2024-05-20 13:26:31] 2024-05-20 11:26:06,605 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-20 13:26:31] 2024-05-20 11:26:06,605 | INFO     | job 6208730881 has finished - writing final server update
[2024-05-20 13:26:31] 2024-05-20 11:26:06,605 | INFO     | total number of processed events: 400 (read)
[2024-05-20 13:26:31] 2024-05-20 11:26:06,607 | INFO     | executing command: lscpu
[2024-05-20 13:26:31] 2024-05-20 11:26:06,630 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-05-20 13:26:31] 2024-05-20 11:26:06,630 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-20 13:26:31] 2024-05-20 11:26:06,660 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-20 13:26:31] 2024-05-20 11:26:10,801 | INFO     | CPU arch script returned: x86-64-v3
[2024-05-20 13:26:31] 2024-05-20 11:26:10,806 | INFO     | using path: /scratch/.boinc/slots/1/PanDA_Pilot-6208730881/memory_monitor_summary.json (trf name=prmon)
[2024-05-20 13:26:31] 2024-05-20 11:26:10,808 | INFO     | extracted standard info from prmon json
[2024-05-20 13:26:31] 2024-05-20 11:26:10,808 | INFO     | extracted standard memory fields from prmon json
[2024-05-20 13:26:31] 2024-05-20 11:26:10,808 | WARNING  | GPU info not found in prmon json
[2024-05-20 13:26:31] 2024-05-20 11:26:10,809 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 13:26:31] 2024-05-20 11:26:10,809 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 13:26:31] 2024-05-20 11:26:10,811 | INFO     | fitting pss+swap vs Time
[2024-05-20 13:26:31] 2024-05-20 11:26:10,811 | INFO     | model: linear, x: [1716200574.0, 1716200635.0, 1716200696.0, 1716200757.0, 1716200818.0, 1716200879.0, 1716200940.0, 1716201001.0, 1716201062.0, 1716201123.0, 1716
[2024-05-20 13:26:31] 2024-05-20 11:26:10,812 | INFO     | sum of square deviations: 70364110.0
[2024-05-20 13:26:31] 2024-05-20 11:26:10,812 | INFO     | sum of deviations: 14439496233.0
[2024-05-20 13:26:31] 2024-05-20 11:26:10,812 | INFO     | mean x: 1716202404.0
[2024-05-20 13:26:31] 2024-05-20 11:26:10,813 | INFO     | mean y: 2683763.5573770492
[2024-05-20 13:26:31] 2024-05-20 11:26:10,813 | INFO     | -- intersect: -352181094978.525
[2024-05-20 13:26:31] 2024-05-20 11:26:10,813 | INFO     | intersect: -352181094978.525
[2024-05-20 13:26:31] 2024-05-20 11:26:10,813 | INFO     | chi2: 1.6117875305968474
[2024-05-20 13:26:31] 2024-05-20 11:26:10,813 | INFO     | -- intersect: -352181094978.525
[2024-05-20 13:26:31] 2024-05-20 11:26:10,813 | INFO     | current memory leak: 205.21 B/s (using 61 data points, chi2=1.61)
[2024-05-20 13:26:31] 2024-05-20 11:26:10,814 | INFO     | ..............................
[2024-05-20 13:26:31] 2024-05-20 11:26:10,814 | INFO     | . Timing measurements:
[2024-05-20 13:26:31] 2024-05-20 11:26:10,814 | INFO     | . get job = 0 s
[2024-05-20 13:26:31] 2024-05-20 11:26:10,814 | INFO     | . initial setup = 1 s
[2024-05-20 13:26:31] 2024-05-20 11:26:10,814 | INFO     | . payload setup = 6 s
[2024-05-20 13:26:31] 2024-05-20 11:26:10,814 | INFO     | . stage-in = 0 s
[2024-05-20 13:26:31] 2024-05-20 11:26:10,814 | INFO     | . payload execution = 4098 s
[2024-05-20 13:26:31] 2024-05-20 11:26:10,814 | INFO     | . stage-out = 0 s
[2024-05-20 13:26:31] 2024-05-20 11:26:10,815 | INFO     | . log creation = 0 s
[2024-05-20 13:26:31] 2024-05-20 11:26:10,815 | INFO     | ..............................
[2024-05-20 13:26:31] 2024-05-20 11:26:10,931 | WARNING  | process 2747937 is no longer using CPU - aborting
[2024-05-20 13:26:31] 2024-05-20 11:26:10,947 | INFO     | aborting job monitoring since job object (job id=6208730881) has expired
[2024-05-20 13:26:31] 2024-05-20 11:26:10,962 | INFO     | 
[2024-05-20 13:26:31] 2024-05-20 11:26:10,962 | INFO     | job summary report
[2024-05-20 13:26:31] 2024-05-20 11:26:10,962 | INFO     | --------------------------------------------------
[2024-05-20 13:26:31] 2024-05-20 11:26:10,962 | INFO     | PanDA job id: 6208730881
[2024-05-20 13:26:31] 2024-05-20 11:26:10,962 | INFO     | task id: 38776104
[2024-05-20 13:26:31] 2024-05-20 11:26:10,962 | INFO     | errors: (none)
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | pilot state: finished 
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | transexitcode: 0
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | exeerrorcode: 0
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | exeerrordiag: 
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | exitcode: 0
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | exitmsg: OK
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | cpuconsumptiontime: 39091 s
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | nevents: 400
[2024-05-20 13:26:31] 2024-05-20 11:26:10,963 | INFO     | neventsw: 0
[2024-05-20 13:26:31] 2024-05-20 11:26:10,964 | INFO     | pid: 2747937
[2024-05-20 13:26:31] 2024-05-20 11:26:10,964 | INFO     | pgrp: 2747937
[2024-05-20 13:26:31] 2024-05-20 11:26:10,964 | INFO     | corecount: 12
[2024-05-20 13:26:31] 2024-05-20 11:26:10,964 | INFO     | event service: False
[2024-05-20 13:26:31] 2024-05-20 11:26:10,964 | INFO     | sizes: {0: 2391302, 1: 2392237, 6: 2392443, 12: 2392471, 4105: 2418447, 4106: 2427592, 4107: 2427592, 4113: 2427762}
[2024-05-20 13:26:31] 2024-05-20 11:26:10,964 | INFO     | --------------------------------------------------
[2024-05-20 13:26:31] 2024-05-20 11:26:10,964 | INFO     | 
[2024-05-20 13:26:31] 2024-05-20 11:26:10,964 | INFO     | executing command: ls -lF /scratch/.boinc/slots/1
[2024-05-20 13:26:31] 2024-05-20 11:26:10,986 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,986 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,986 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,986 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,986 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,986 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,986 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,986 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,987 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,987 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,987 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,987 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,987 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,987 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,987 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,987 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,987 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,988 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 13:26:31] 2024-05-20 11:26:10,988 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,988 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 13:26:31] 2024-05-20 11:26:10,988 | INFO     | job 6208730881 has completed (purged errors)
[2024-05-20 13:26:31] 2024-05-20 11:26:10,988 | INFO     | overall cleanup function is called
[2024-05-20 13:26:31] 2024-05-20 11:26:11,996 | INFO     | --- collectZombieJob: --- 10, [2747937]
[2024-05-20 13:26:31] 2024-05-20 11:26:11,997 | INFO     | zombie collector waiting for pid 2747937
[2024-05-20 13:26:31] 2024-05-20 11:26:11,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 13:26:31] 2024-05-20 11:26:13,002 | INFO     | collected zombie processes
[2024-05-20 13:26:31] 2024-05-20 11:26:13,003 | INFO     | will now attempt to kill all subprocesses of pid=2747937
[2024-05-20 13:26:31] 2024-05-20 11:26:13,081 | INFO     | process IDs to be killed: [2747937] (in reverse order)
[2024-05-20 13:26:31] 2024-05-20 11:26:13,136 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 13:26:31] 2024-05-20 11:26:13,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 13:26:31] 2024-05-20 11:26:13,143 | INFO     | did not find any defunct processes belonging to 2747937
[2024-05-20 13:26:31] 2024-05-20 11:26:13,149 | INFO     | did not find any defunct processes belonging to 2747937
[2024-05-20 13:26:31] 2024-05-20 11:26:13,149 | INFO     | ready for new job
[2024-05-20 13:26:31] 2024-05-20 11:26:13,149 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 13:26:31] 2024-05-20 11:26:13,151 | INFO     | *************************************
[2024-05-20 13:26:31] 2024-05-20 11:26:13,152 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 13:26:31] 2024-05-20 11:26:13,152 | INFO     | *************************************
[2024-05-20 13:26:31] 2024-05-20 11:26:13,152 | INFO     | 
[2024-05-20 13:26:31] 2024-05-20 11:26:13,154 | INFO     | architecture information:
[2024-05-20 13:26:31] 2024-05-20 11:26:13,154 | INFO     | executing command: cat /etc/os-release
[2024-05-20 13:26:31] 2024-05-20 11:26:13,170 | INFO     | cat /etc/os-release:
[2024-05-20 13:26:31] NAME="CentOS Linux"
[2024-05-20 13:26:31] VERSION="7 (Core)"
[2024-05-20 13:26:31] ID="centos"
[2024-05-20 13:26:31] ID_LIKE="rhel fedora"
[2024-05-20 13:26:31] VERSION_ID="7"
[2024-05-20 13:26:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 13:26:31] ANSI_COLOR="0;31"
[2024-05-20 13:26:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 13:26:31] HOME_URL="https://www.centos.org/"
[2024-05-20 13:26:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 13:26:31] 
[2024-05-20 13:26:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 13:26:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 13:26:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 13:26:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 13:26:31] 
[2024-05-20 13:26:31] 2024-05-20 11:26:13,170 | INFO     | *************************************
[2024-05-20 13:26:31] 2024-05-20 11:26:13,673 | INFO     | executing command: df -mP /scratch/.boinc/slots/1
[2024-05-20 13:26:31] 2024-05-20 11:26:13,692 | INFO     | sufficient remaining disk space (709821988864 B)
[2024-05-20 13:26:31] 2024-05-20 11:26:13,692 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 13:26:31] 2024-05-20 11:26:13,693 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 13:26:31] 2024-05-20 11:26:13,693 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 13:26:31] 2024-05-20 11:26:13,693 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 13:26:31] 2024-05-20 11:26:13,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 13:26:31] 2024-05-20 11:26:13,694 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 13:26:31] 2024-05-20 11:26:13,775 | INFO     | all data control threads have been joined
[2024-05-20 13:26:31] 2024-05-20 11:26:14,465 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 13:26:31] 2024-05-20 11:26:14,465 | INFO     | aborting loop
[2024-05-20 13:26:31] 2024-05-20 11:26:14,645 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 13:26:31] 2024-05-20 11:26:14,698 | INFO     | [job] retrieve thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:14,713 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:14,729 | INFO     | all job control threads have been joined
[2024-05-20 13:26:31] 2024-05-20 11:26:14,781 | INFO     | [data] control thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:14,829 | INFO     | all payload control threads have been joined
[2024-05-20 13:26:31] 2024-05-20 11:26:14,942 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:14,973 | INFO     | [payload] failed_post thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:15,222 | INFO     | [data] copytool_in thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:15,471 | INFO     | [job] job monitor thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:15,576 | INFO     | [payload] validate_post thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:15,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 13:26:31] 2024-05-20 11:26:15,734 | INFO     | [job] control thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:15,834 | INFO     | [payload] control thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:15,947 | INFO     | [job] validate thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:15,973 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 13:26:31] 2024-05-20 11:26:16,155 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:16,651 | INFO     | [data] copytool_out thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:16,978 | INFO     | [job] queue monitor thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:19,606 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:23,913 | INFO     | job.realtimelogging is not enabled
[2024-05-20 13:26:31] 2024-05-20 11:26:24,918 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 13:26:31] 2024-05-20 11:26:26,551 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139651482335040)>', '<ExcThread(monitor, started 139650911950592)>']
[2024-05-20 13:26:31] 2024-05-20 11:26:26,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 13:26:31] 2024-05-20 11:26:26,744 | INFO     | [monitor] control thread has ended
[2024-05-20 13:26:31] 2024-05-20 11:26:31,576 | INFO     | all workflow threads have been joined
[2024-05-20 13:26:31] 2024-05-20 11:26:31,576 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 13:26:31] 2024-05-20 11:26:31,577 | INFO     | traces error code: 0
[2024-05-20 13:26:31] 2024-05-20 11:26:31,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 13:26:31] 2024-05-20 11:26:31,664 [wrapper] ==== pilot stdout END ====
[2024-05-20 13:26:31] 2024-05-20 11:26:31,668 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 13:26:31] 2024-05-20 11:26:31,670 [wrapper] pilotpid: 2741140
[2024-05-20 13:26:31] 2024-05-20 11:26:31,673 [wrapper] Pilot exit status: 0
[2024-05-20 13:26:31] 2024-05-20 11:26:31,682 [wrapper] pandaids: 6208730881
[2024-05-20 13:26:31] 2024-05-20 11:26:31,718 [wrapper] cleanup: SIGTERM to supervisor_pilot 2816854 2741141
[2024-05-20 13:26:31] 2024-05-20 11:26:31,720 [wrapper] Test setup, not cleaning
[2024-05-20 13:26:31] 2024-05-20 11:26:31,722 [wrapper] ==== wrapper stdout END ====
[2024-05-20 13:26:31] 2024-05-20 11:26:31,723 [wrapper] ==== wrapper stderr END ====
[2024-05-20 13:26:31] 2024-05-20 11:26:31,727 [wrapper] apfmon messages muted
[2024-05-20 13:26:31]  *** Error codes and diagnostics ***
[2024-05-20 13:26:31]     "exeErrorCode": 0,
[2024-05-20 13:26:31]     "exeErrorDiag": "",
[2024-05-20 13:26:31]     "pilotErrorCode": 0,
[2024-05-20 13:26:31]     "pilotErrorDiag": "",
[2024-05-20 13:26:31]  *** Listing of results directory ***
[2024-05-20 13:26:31] total 817208
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc    467845 May 18 14:46 pilot3.tar.gz
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc      5633 May 18 14:48 queuedata.json
[2024-05-20 13:26:31] -rwx------ 1 boinc boinc     32251 May 18 14:49 runpilot2-wrapper.sh
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc       100 May 20 12:17 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 13:26:31] -rwxr-xr-x 1 boinc boinc      7986 May 20 12:17 run_atlas
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc       105 May 20 12:17 job.xml
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc      6528 May 20 12:17 init_data.xml
[2024-05-20 13:26:31] -rw-r--r-- 2 boinc boinc 597239552 May 20 12:17 EVNT.38776100._000561.pool.root.1
[2024-05-20 13:26:31] -rw-r--r-- 2 boinc boinc     17537 May 20 12:17 start_atlas.sh
[2024-05-20 13:26:31] drwxrwx--x 2 boinc boinc      4096 May 20 12:17 shared
[2024-05-20 13:26:31] -rw-r--r-- 2 boinc boinc    480004 May 20 12:17 input.tar.gz
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc         0 May 20 12:17 boinc_lockfile
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc      2645 May 20 12:17 pandaJob.out
[2024-05-20 13:26:31] -rw------- 1 boinc boinc       424 May 20 12:17 setup.sh.local
[2024-05-20 13:26:31] -rw------- 1 boinc boinc   1013914 May 20 12:17 agis_schedconf.cvmfs.json
[2024-05-20 13:26:31] -rw------- 1 boinc boinc         0 May 20 12:17 agis_ddmendpoints.agis.ALL.json
[2024-05-20 13:26:31] -rw------- 1 boinc boinc   1324701 May 20 12:17 cric_ddmendpoints.json
[2024-05-20 13:26:31] drwx------ 4 boinc boinc      4096 May 20 12:17 pilot3
[2024-05-20 13:26:31] -rw------- 1 boinc boinc        95 May 20 13:25 pilot_heartbeat.json
[2024-05-20 13:26:31] -rw------- 1 boinc boinc 234474696 May 20 13:25 HITS.38776104._017448.pool.root.1
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc       530 May 20 13:25 boinc_task_state.xml
[2024-05-20 13:26:31] -rw------- 1 boinc boinc      1036 May 20 13:26 memory_monitor_summary.json
[2024-05-20 13:26:31] -rw------- 1 boinc boinc    362154 May 20 13:26 log.38776104._017448.job.log.tgz.1
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc      8192 May 20 13:26 boinc_mmap_file
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc        27 May 20 13:26 wrapper_checkpoint.txt
[2024-05-20 13:26:31] -rw------- 1 boinc boinc      7721 May 20 13:26 heartbeat.json
[2024-05-20 13:26:31] -rw------- 1 boinc boinc      4408 May 20 13:26 pilotlog.txt
[2024-05-20 13:26:31] -rw------- 1 boinc boinc    424378 May 20 13:26 log.38776104._017448.job.log.1
[2024-05-20 13:26:31] -rw------- 1 boinc boinc       357 May 20 13:26 output.list
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc       620 May 20 13:26 runtime_log
[2024-05-20 13:26:31] -rw------- 1 boinc boinc    808960 May 20 13:26 result.tar.gz
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc     11064 May 20 13:26 runtime_log.err
[2024-05-20 13:26:31] -rw------- 1 boinc boinc       659 May 20 13:26 PRzKDmKgYS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmXcSKDmsxOysm.diag
[2024-05-20 13:26:31] -rw-r--r-- 1 boinc boinc     21079 May 20 13:26 stderr.txt
[2024-05-20 13:26:31] HITS file was successfully produced:
[2024-05-20 13:26:31] -rw------- 1 boinc boinc 234474696 May 20 13:25 shared/HITS.pool.root.1
[2024-05-20 13:26:31]  *** Contents of shared directory: ***
[2024-05-20 13:26:31] total 813516
[2024-05-20 13:26:31] -rw-r--r-- 2 boinc boinc 597239552 May 20 12:17 ATLAS.root_0
[2024-05-20 13:26:31] -rw-r--r-- 2 boinc boinc     17537 May 20 12:17 start_atlas.sh
[2024-05-20 13:26:31] -rw-r--r-- 2 boinc boinc    480004 May 20 12:17 input.tar.gz
[2024-05-20 13:26:31] -rw------- 1 boinc boinc 234474696 May 20 13:25 HITS.pool.root.1
[2024-05-20 13:26:31] -rw------- 1 boinc boinc    808960 May 20 13:26 result.tar.gz
13:26:33 (2736717): run_atlas exited; CPU time 38750.764398
13:26:33 (2736717): called boinc_finish(0)

</stderr_txt>
]]>

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