Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
11:09:57 (250300): wrapper (7.7.26015): starting
11:09:57 (250300): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 11:09:57] Arguments: --nthreads 12
[2024-05-18 11:09:57] Threads: 12
[2024-05-18 11:09:57] Checking for CVMFS
[2024-05-18 11:09:57] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 11:09:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 11:09:57] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 11:09:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 11:09:58] 2.10.1.0 2884 174000 195812 132886 3 241 34224511 45568000 9408 130560 0 1005896479 99.774 608300524 18469 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 11:09:58] CVMFS is ok
[2024-05-18 11:09:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 11:09:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 11:09:58] Further information can be found at the LHC@home message board.
[2024-05-18 11:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 11:09:58] Checking for apptainer binary...
[2024-05-18 11:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 11:09:58] Running /usr/bin/apptainer --version
[2024-05-18 11:09:58] apptainer version 1.1.8-1.el7
[2024-05-18 11:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 11:09:59] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0154.triumf.lcg
[2024-05-18 11:09:59] apptainer works
[2024-05-18 11:09:59] Set ATHENA_PROC_NUMBER=12
[2024-05-18 11:09:59] Set ATHENA_CORE_NUMBER=12
[2024-05-18 11:09:59] Starting ATLAS job with PandaID=6208730032
[2024-05-18 11:09:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 12:15:31]  *** The last 200 lines of the pilot log: ***
[2024-05-18 12:15:31]  domain=
[2024-05-18 12:15:31]  filesize=361627
[2024-05-18 12:15:31]  filetype=log
[2024-05-18 12:15:31]  guid=1e3165ec-70eb-4a40-9a74-24ab59aad8c9
[2024-05-18 12:15:31]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 12:15:31]  is_tar=False
[2024-05-18 12:15:31]  lfn=log.38776104._017372.job.log.tgz.1
[2024-05-18 12:15:31]  mtime=0
[2024-05-18 12:15:31]  protocol_id=None
[2024-05-18 12:15:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 12:15:31]  replicas=None
[2024-05-18 12:15:31]  scope=mc23_13p6TeV
[2024-05-18 12:15:31]  status=None
[2024-05-18 12:15:31]  status_code=0
[2024-05-18 12:15:31]  storage_token=
[2024-05-18 12:15:31]  surl=/home/boinc/slots/0/PanDA_Pilot-6208730032/log.38776104._017372.job.log.tgz.1
[2024-05-18 12:15:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/58/log.38776104._017372.job.log.tgz.1
[2024-05-18 12:15:31]  workdir=None
[2024-05-18 12:15:31] ]
[2024-05-18 12:15:31] 2024-05-18 19:15:06,528 | INFO     | transferring file log.38776104._017372.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208730032/log.38776104._017372.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 12:15:31] 2024-05-18 19:15:06,528 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208730032/log.38776104._017372.job.log.tgz.1 /home/boinc/slots/0/log.38776104._017372.job.log.t
[2024-05-18 12:15:31] 2024-05-18 19:15:06,558 | INFO     | adding to output.list: log.38776104._017372.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/58/log.38776104._017372.job.log.tg
[2024-05-18 12:15:31] 2024-05-18 19:15:06,559 | INFO     | summary of transferred files:
[2024-05-18 12:15:31] 2024-05-18 19:15:06,559 | INFO     |  -- lfn=log.38776104._017372.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 12:15:31] 2024-05-18 19:15:06,560 | INFO     | stage-out finished correctly
[2024-05-18 12:15:31] 2024-05-18 19:15:10,091 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 12:15:31] 2024-05-18 19:15:11,166 | WARNING  | process 275763 is no longer using CPU - aborting
[2024-05-18 12:15:31] 2024-05-18 19:15:11,166 | INFO     | will not send any job update
[2024-05-18 12:15:31] 2024-05-18 19:15:12,339 | INFO     | job 6208730032 has state=finished
[2024-05-18 12:15:31] 2024-05-18 19:15:12,339 | INFO     | preparing for final server update for job 6208730032 in state='finished'
[2024-05-18 12:15:31] 2024-05-18 19:15:12,340 | INFO     | this job has now completed (state=finished)
[2024-05-18 12:15:31] 2024-05-18 19:15:12,340 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 12:15:31] 2024-05-18 19:15:12,341 | INFO     | job 6208730032 has finished - writing final server update
[2024-05-18 12:15:31] 2024-05-18 19:15:12,341 | INFO     | total number of processed events: 400 (read)
[2024-05-18 12:15:31] 2024-05-18 19:15:12,348 | INFO     | executing command: lscpu
[2024-05-18 12:15:31] 2024-05-18 19:15:12,402 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 12:15:31] 2024-05-18 19:15:12,403 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 12:15:31] 2024-05-18 19:15:12,462 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 12:15:31] 2024-05-18 19:15:13,669 | INFO     | monitor loop #307: job 0:6208730032 is in state 'finished'
[2024-05-18 12:15:31] 2024-05-18 19:15:13,670 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 12:15:31] 2024-05-18 19:15:16,173 | INFO     | monitor loop #308: job 0:6208730032 is in state 'finished'
[2024-05-18 12:15:31] 2024-05-18 19:15:16,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 12:15:31] 2024-05-18 19:15:17,600 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 12:15:31] 2024-05-18 19:15:17,600 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208730032/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 12:15:31] 2024-05-18 19:15:17,601 | INFO     | extracted standard info from prmon json
[2024-05-18 12:15:31] 2024-05-18 19:15:17,601 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 12:15:31] 2024-05-18 19:15:17,602 | WARNING  | GPU info not found in prmon json
[2024-05-18 12:15:31] 2024-05-18 19:15:17,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 12:15:31] 2024-05-18 19:15:17,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 12:15:31] 2024-05-18 19:15:17,603 | INFO     | fitting pss+swap vs Time
[2024-05-18 12:15:31] 2024-05-18 19:15:17,603 | INFO     | model: linear, x: [1716056145.0, 1716056206.0, 1716056267.0, 1716056328.0, 1716056389.0, 1716056450.0, 1716056511.0, 1716056572.0, 1716056633.0, 1716056694.0, 1716
[2024-05-18 12:15:31] 2024-05-18 19:15:17,603 | INFO     | sum of square deviations: 57407588.0
[2024-05-18 12:15:31] 2024-05-18 19:15:17,604 | INFO     | sum of deviations: 23484216272.0
[2024-05-18 12:15:31] 2024-05-18 19:15:17,604 | INFO     | mean x: 1716057853.0
[2024-05-18 12:15:31] 2024-05-18 19:15:17,604 | INFO     | mean y: 2540087.49122807
[2024-05-18 12:15:31] 2024-05-18 19:15:17,604 | INFO     | -- intersect: -702000020185.8298
[2024-05-18 12:15:31] 2024-05-18 19:15:17,604 | INFO     | intersect: -702000020185.8298
[2024-05-18 12:15:31] 2024-05-18 19:15:17,604 | INFO     | chi2: 2.663811940194356
[2024-05-18 12:15:31] 2024-05-18 19:15:17,604 | INFO     | -- intersect: -702000020185.8298
[2024-05-18 12:15:31] 2024-05-18 19:15:17,604 | INFO     | current memory leak: 409.08 B/s (using 57 data points, chi2=2.66)
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | ..............................
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | . Timing measurements:
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | . get job = 0 s
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | . initial setup = 2 s
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | . payload setup = 6 s
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | . stage-in = 0 s
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | . payload execution = 3865 s
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | . stage-out = 0 s
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | . log creation = 0 s
[2024-05-18 12:15:31] 2024-05-18 19:15:17,605 | INFO     | ..............................
[2024-05-18 12:15:31] 2024-05-18 19:15:17,671 | INFO     | 
[2024-05-18 12:15:31] 2024-05-18 19:15:17,671 | INFO     | job summary report
[2024-05-18 12:15:31] 2024-05-18 19:15:17,671 | INFO     | --------------------------------------------------
[2024-05-18 12:15:31] 2024-05-18 19:15:17,672 | INFO     | PanDA job id: 6208730032
[2024-05-18 12:15:31] 2024-05-18 19:15:17,672 | INFO     | task id: 38776104
[2024-05-18 12:15:31] 2024-05-18 19:15:17,672 | INFO     | errors: (none)
[2024-05-18 12:15:31] 2024-05-18 19:15:17,672 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 12:15:31] 2024-05-18 19:15:17,672 | INFO     | pilot state: finished 
[2024-05-18 12:15:31] 2024-05-18 19:15:17,672 | INFO     | transexitcode: 0
[2024-05-18 12:15:31] 2024-05-18 19:15:17,672 | INFO     | exeerrorcode: 0
[2024-05-18 12:15:31] 2024-05-18 19:15:17,672 | INFO     | exeerrordiag: 
[2024-05-18 12:15:31] 2024-05-18 19:15:17,673 | INFO     | exitcode: 0
[2024-05-18 12:15:31] 2024-05-18 19:15:17,673 | INFO     | exitmsg: OK
[2024-05-18 12:15:31] 2024-05-18 19:15:17,673 | INFO     | cpuconsumptiontime: 34546 s
[2024-05-18 12:15:31] 2024-05-18 19:15:17,673 | INFO     | nevents: 400
[2024-05-18 12:15:31] 2024-05-18 19:15:17,673 | INFO     | neventsw: 0
[2024-05-18 12:15:31] 2024-05-18 19:15:17,673 | INFO     | pid: 275763
[2024-05-18 12:15:31] 2024-05-18 19:15:17,673 | INFO     | pgrp: 275763
[2024-05-18 12:15:31] 2024-05-18 19:15:17,673 | INFO     | corecount: 12
[2024-05-18 12:15:31] 2024-05-18 19:15:17,673 | INFO     | event service: False
[2024-05-18 12:15:31] 2024-05-18 19:15:17,674 | INFO     | sizes: {0: 2392204, 5: 2392410, 11: 2392466, 3876: 2418246, 3878: 2427200, 3882: 2427256, 3889: 2427554}
[2024-05-18 12:15:31] 2024-05-18 19:15:17,674 | INFO     | --------------------------------------------------
[2024-05-18 12:15:31] 2024-05-18 19:15:17,674 | INFO     | 
[2024-05-18 12:15:31] 2024-05-18 19:15:17,674 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 12:15:31] 2024-05-18 19:15:17,705 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,706 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,706 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,706 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,707 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,707 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,707 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,708 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 12:15:31] 2024-05-18 19:15:17,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,708 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 12:15:31] 2024-05-18 19:15:17,708 | INFO     | job 6208730032 has completed (purged errors)
[2024-05-18 12:15:31] 2024-05-18 19:15:17,709 | INFO     | overall cleanup function is called
[2024-05-18 12:15:31] 2024-05-18 19:15:18,718 | INFO     | --- collectZombieJob: --- 10, [275763]
[2024-05-18 12:15:31] 2024-05-18 19:15:18,718 | INFO     | zombie collector waiting for pid 275763
[2024-05-18 12:15:31] 2024-05-18 19:15:18,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 12:15:31] 2024-05-18 19:15:19,726 | INFO     | collected zombie processes
[2024-05-18 12:15:31] 2024-05-18 19:15:19,726 | INFO     | will now attempt to kill all subprocesses of pid=275763
[2024-05-18 12:15:31] 2024-05-18 19:15:19,878 | INFO     | process IDs to be killed: [275763] (in reverse order)
[2024-05-18 12:15:31] 2024-05-18 19:15:19,995 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 12:15:31] 2024-05-18 19:15:19,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 12:15:31] 2024-05-18 19:15:20,005 | INFO     | did not find any defunct processes belonging to 275763
[2024-05-18 12:15:31] 2024-05-18 19:15:20,011 | INFO     | did not find any defunct processes belonging to 275763
[2024-05-18 12:15:31] 2024-05-18 19:15:20,011 | INFO     | ready for new job
[2024-05-18 12:15:31] 2024-05-18 19:15:20,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 12:15:31] 2024-05-18 19:15:20,012 | INFO     | *************************************
[2024-05-18 12:15:31] 2024-05-18 19:15:20,012 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 12:15:31] 2024-05-18 19:15:20,013 | INFO     | *************************************
[2024-05-18 12:15:31] 2024-05-18 19:15:20,013 | INFO     | 
[2024-05-18 12:15:31] 2024-05-18 19:15:20,015 | INFO     | architecture information:
[2024-05-18 12:15:31] 2024-05-18 19:15:20,015 | INFO     | executing command: cat /etc/os-release
[2024-05-18 12:15:31] 2024-05-18 19:15:20,037 | INFO     | cat /etc/os-release:
[2024-05-18 12:15:31] NAME="CentOS Linux"
[2024-05-18 12:15:31] VERSION="7 (Core)"
[2024-05-18 12:15:31] ID="centos"
[2024-05-18 12:15:31] ID_LIKE="rhel fedora"
[2024-05-18 12:15:31] VERSION_ID="7"
[2024-05-18 12:15:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 12:15:31] ANSI_COLOR="0;31"
[2024-05-18 12:15:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 12:15:31] HOME_URL="https://www.centos.org/"
[2024-05-18 12:15:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 12:15:31] 
[2024-05-18 12:15:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 12:15:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 12:15:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 12:15:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 12:15:31] 
[2024-05-18 12:15:31] 2024-05-18 19:15:20,038 | INFO     | *************************************
[2024-05-18 12:15:31] 2024-05-18 19:15:20,541 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 12:15:31] 2024-05-18 19:15:20,566 | INFO     | sufficient remaining disk space (2208859947008 B)
[2024-05-18 12:15:31] 2024-05-18 19:15:20,566 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 12:15:31] 2024-05-18 19:15:20,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 12:15:31] 2024-05-18 19:15:20,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 12:15:31] 2024-05-18 19:15:20,567 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 12:15:31] 2024-05-18 19:15:20,568 | INFO     | aborting loop
[2024-05-18 12:15:31] 2024-05-18 19:15:20,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 12:15:31] 2024-05-18 19:15:20,788 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 12:15:31] 2024-05-18 19:15:20,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 12:15:31] 2024-05-18 19:15:20,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 12:15:31] 2024-05-18 19:15:20,812 | INFO     | all payload control threads have been joined
[2024-05-18 12:15:31] 2024-05-18 19:15:20,813 | INFO     | all data control threads have been joined
[2024-05-18 12:15:31] 2024-05-18 19:15:21,570 | INFO     | [job] job monitor thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:21,572 | INFO     | [job] retrieve thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:21,819 | INFO     | [payload] control thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:21,819 | INFO     | [data] control thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:21,873 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:21,928 | INFO     | [payload] failed_post thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:22,091 | INFO     | [data] copytool_in thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:22,232 | INFO     | all job control threads have been joined
[2024-05-18 12:15:31] 2024-05-18 19:15:22,290 | INFO     | [job] validate thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:22,307 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:22,344 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:22,568 | INFO     | [data] copytool_out thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:22,665 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:22,683 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 12:15:31] 2024-05-18 19:15:23,051 | INFO     | [payload] validate_post thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:23,238 | INFO     | [job] control thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:23,689 | INFO     | [job] queue monitor thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:24,682 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 12:15:31] 2024-05-18 19:15:25,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002935764800)>', '<ExcThread(monitor, started 140002731435776)>']
[2024-05-18 12:15:31] 2024-05-18 19:15:25,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 12:15:31] 2024-05-18 19:15:25,811 | INFO     | [monitor] control thread has ended
[2024-05-18 12:15:31] 2024-05-18 19:15:30,334 | INFO     | all workflow threads have been joined
[2024-05-18 12:15:31] 2024-05-18 19:15:30,334 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 12:15:31] 2024-05-18 19:15:30,335 | INFO     | traces error code: 0
[2024-05-18 12:15:31] 2024-05-18 19:15:30,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 12:15:31] 2024-05-18 19:15:30,409 [wrapper] ==== pilot stdout END ====
[2024-05-18 12:15:31] 2024-05-18 19:15:30,414 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 12:15:31] 2024-05-18 19:15:30,418 [wrapper] pilotpid: 255453
[2024-05-18 12:15:31] 2024-05-18 19:15:30,421 [wrapper] Pilot exit status: 0
[2024-05-18 12:15:31] 2024-05-18 19:15:30,433 [wrapper] pandaids: 6208730032
[2024-05-18 12:15:31] 2024-05-18 19:15:30,501 [wrapper] cleanup: SIGTERM to supervisor_pilot 123813 255454
[2024-05-18 12:15:31] 2024-05-18 19:15:30,506 [wrapper] Test setup, not cleaning
[2024-05-18 12:15:31] 2024-05-18 19:15:30,511 [wrapper] ==== wrapper stdout END ====
[2024-05-18 12:15:31] 2024-05-18 19:15:30,515 [wrapper] ==== wrapper stderr END ====
[2024-05-18 12:15:31] 2024-05-18 19:15:30,524 [wrapper] apfmon messages muted
[2024-05-18 12:15:31]  *** Error codes and diagnostics ***
[2024-05-18 12:15:31]     "exeErrorCode": 0,
[2024-05-18 12:15:31]     "exeErrorDiag": "",
[2024-05-18 12:15:31]     "pilotErrorCode": 0,
[2024-05-18 12:15:31]     "pilotErrorDiag": "",
[2024-05-18 12:15:31]  *** Listing of results directory ***
[2024-05-18 12:15:31] total 819680
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc    467845 May 18 05:22 pilot3.tar.gz
[2024-05-18 12:15:31] -rwx------ 1 boinc boinc     32251 May 18 05:32 runpilot2-wrapper.sh
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc      5633 May 18 05:32 queuedata.json
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc       100 May 18 11:09 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 12:15:31] -rwxr-xr-x 1 boinc boinc      7986 May 18 11:09 run_atlas
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc       105 May 18 11:09 job.xml
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc      6622 May 18 11:09 init_data.xml
[2024-05-18 12:15:31] -rw-r--r-- 2 boinc boinc 602363107 May 18 11:09 EVNT.38776100._000558.pool.root.1
[2024-05-18 12:15:31] -rw-r--r-- 2 boinc boinc     17537 May 18 11:09 start_atlas.sh
[2024-05-18 12:15:31] drwxrwx--x 2 boinc boinc      4096 May 18 11:09 shared
[2024-05-18 12:15:31] -rw-r--r-- 2 boinc boinc    480001 May 18 11:09 input.tar.gz
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc         0 May 18 11:09 boinc_lockfile
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc      2644 May 18 11:09 pandaJob.out
[2024-05-18 12:15:31] -rw------- 1 boinc boinc       424 May 18 11:09 setup.sh.local
[2024-05-18 12:15:31] -rw------- 1 boinc boinc   1019065 May 18 11:10 agis_schedconf.cvmfs.json
[2024-05-18 12:15:31] -rw------- 1 boinc boinc         0 May 18 11:10 agis_ddmendpoints.agis.ALL.json
[2024-05-18 12:15:31] -rw------- 1 boinc boinc   1324701 May 18 11:10 cric_ddmendpoints.json
[2024-05-18 12:15:31] drwx------ 4 boinc boinc      4096 May 18 11:10 pilot3
[2024-05-18 12:15:31] -rw------- 1 boinc boinc 231932039 May 18 12:14 HITS.38776104._017372.pool.root.1
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc       530 May 18 12:14 boinc_task_state.xml
[2024-05-18 12:15:31] -rw------- 1 boinc boinc      1051 May 18 12:15 memory_monitor_summary.json
[2024-05-18 12:15:31] -rw------- 1 boinc boinc    361627 May 18 12:15 log.38776104._017372.job.log.tgz.1
[2024-05-18 12:15:31] -rw------- 1 boinc boinc      7768 May 18 12:15 heartbeat.json
[2024-05-18 12:15:31] -rw------- 1 boinc boinc        95 May 18 12:15 pilot_heartbeat.json
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc      8192 May 18 12:15 boinc_mmap_file
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc        27 May 18 12:15 wrapper_checkpoint.txt
[2024-05-18 12:15:31] -rw------- 1 boinc boinc      4210 May 18 12:15 pilotlog.txt
[2024-05-18 12:15:31] -rw------- 1 boinc boinc    397457 May 18 12:15 log.38776104._017372.job.log.1
[2024-05-18 12:15:31] -rw------- 1 boinc boinc       357 May 18 12:15 output.list
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc       620 May 18 12:15 runtime_log
[2024-05-18 12:15:31] -rw------- 1 boinc boinc    778240 May 18 12:15 result.tar.gz
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc     11286 May 18 12:15 runtime_log.err
[2024-05-18 12:15:31] -rw------- 1 boinc boinc       651 May 18 12:15 dIRLDmHQYS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmYbSKDmYpFFKn.diag
[2024-05-18 12:15:31] -rw-r--r-- 1 boinc boinc     21480 May 18 12:15 stderr.txt
[2024-05-18 12:15:31] HITS file was successfully produced:
[2024-05-18 12:15:31] -rw------- 1 boinc boinc 231932039 May 18 12:14 shared/HITS.pool.root.1
[2024-05-18 12:15:31]  *** Contents of shared directory: ***
[2024-05-18 12:15:31] total 816008
[2024-05-18 12:15:31] -rw-r--r-- 2 boinc boinc 602363107 May 18 11:09 ATLAS.root_0
[2024-05-18 12:15:31] -rw-r--r-- 2 boinc boinc     17537 May 18 11:09 start_atlas.sh
[2024-05-18 12:15:31] -rw-r--r-- 2 boinc boinc    480001 May 18 11:09 input.tar.gz
[2024-05-18 12:15:31] -rw------- 1 boinc boinc 231932039 May 18 12:14 HITS.pool.root.1
[2024-05-18 12:15:31] -rw------- 1 boinc boinc    778240 May 18 12:15 result.tar.gz
12:15:32 (250300): run_atlas exited; CPU time 34446.088021
12:15:32 (250300): called boinc_finish(0)

</stderr_txt>
]]>

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