Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:31:32 (1296311): wrapper (7.7.26015): starting
11:31:32 (1296311): wrapper: running run_atlas (--nthreads 4)
[2024-05-21 11:31:32] Arguments: --nthreads 4
[2024-05-21 11:31:32] Threads: 4
[2024-05-21 11:31:32] Checking for CVMFS
[2024-05-21 11:31:32] No cvmfs_config command found, will try listing directly
[2024-05-21 11:31:32] CVMFS is ok
[2024-05-21 11:31:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-21 11:31:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-21 11:31:32] Further information can be found at the LHC@home message board.
[2024-05-21 11:31:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-21 11:31:32] Checking for apptainer binary...
[2024-05-21 11:31:32] which: no apptainer in ((null))
[2024-05-21 11:31:32] apptainer is not installed, using version from CVMFS
[2024-05-21 11:31:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-21 11:31:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot104/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2024-05-21 11:31:33] apptainer works
[2024-05-21 11:31:33] Set ATHENA_PROC_NUMBER=4
[2024-05-21 11:31:33] Set ATHENA_CORE_NUMBER=4
[2024-05-21 11:31:33] Starting ATLAS job with PandaID=6208728406
[2024-05-21 11:31:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot104/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-21 13:30:04]  *** The last 200 lines of the pilot log: ***
[2024-05-21 13:30:04] 2024-05-21 11:27:18,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-21 13:30:04] 2024-05-21 11:27:18,937 | INFO     | fitting pss+swap vs Time
[2024-05-21 13:30:04] 2024-05-21 11:27:18,937 | INFO     | model: linear, x: [1716283928.0, 1716283989.0, 1716284050.0, 1716284111.0, 1716284172.0, 1716284233.0, 1716284294.0, 1716284355.0, 1716284416.0, 1716284477.0, 1716
[2024-05-21 13:30:04] 2024-05-21 11:27:18,937 | INFO     | sum of square deviations: 459366752.5
[2024-05-21 13:30:04] 2024-05-21 11:27:18,938 | INFO     | sum of deviations: 37102950246.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,938 | INFO     | mean x: 1716287374.5
[2024-05-21 13:30:04] 2024-05-21 11:27:18,938 | INFO     | mean y: 2212918.5614035088
[2024-05-21 13:30:04] 2024-05-21 11:27:18,938 | INFO     | -- intersect: -138621935906.64438
[2024-05-21 13:30:04] 2024-05-21 11:27:18,938 | INFO     | intersect: -138621935906.64438
[2024-05-21 13:30:04] 2024-05-21 11:27:18,938 | INFO     | chi2: 4.828160790347849
[2024-05-21 13:30:04] 2024-05-21 11:27:18,938 | INFO     | model: linear, x: [1716283928.0, 1716283989.0, 1716284050.0, 1716284111.0, 1716284172.0, 1716284233.0, 1716284294.0, 1716284355.0, 1716284416.0, 1716284477.0, 1716
[2024-05-21 13:30:04] 2024-05-21 11:27:18,938 | INFO     | sum of square deviations: 401533110.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,939 | INFO     | sum of deviations: 42204775952.99999
[2024-05-21 13:30:04] 2024-05-21 11:27:18,939 | INFO     | mean x: 1716287222.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,939 | INFO     | mean y: 2225710.76146789
[2024-05-21 13:30:04] 2024-05-21 11:27:18,939 | INFO     | -- intersect: -180395145941.8695
[2024-05-21 13:30:04] 2024-05-21 11:27:18,939 | INFO     | intersect: -180395145941.8695
[2024-05-21 13:30:04] 2024-05-21 11:27:18,939 | INFO     | chi2: 4.06153547681118
[2024-05-21 13:30:04] 2024-05-21 11:27:18,939 | INFO     | current chi2=4.06153547681118 (change=15.878205942711299 %)
[2024-05-21 13:30:04] 2024-05-21 11:27:18,939 | INFO     | right removable region: 108
[2024-05-21 13:30:04] 2024-05-21 11:27:18,940 | INFO     | model: linear, x: [1716284233.0, 1716284294.0, 1716284355.0, 1716284416.0, 1716284477.0, 1716284538.0, 1716284599.0, 1716284660.0, 1716284721.0, 1716284782.0, 1716
[2024-05-21 13:30:04] 2024-05-21 11:27:18,940 | INFO     | sum of square deviations: 401533110.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,940 | INFO     | sum of deviations: 12127428605.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,940 | INFO     | mean x: 1716287527.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,940 | INFO     | mean y: 2278455.110091743
[2024-05-21 13:30:04] 2024-05-21 11:27:18,940 | INFO     | -- intersect: -51834429230.949745
[2024-05-21 13:30:04] 2024-05-21 11:27:18,940 | INFO     | intersect: -51834429230.949745
[2024-05-21 13:30:04] 2024-05-21 11:27:18,941 | INFO     | chi2: 2.356655899692653
[2024-05-21 13:30:04] 2024-05-21 11:27:18,941 | INFO     | current chi2=2.356655899692653 (change=51.18936584705445 %)
[2024-05-21 13:30:04] 2024-05-21 11:27:18,941 | INFO     | model: linear, x: [1716284538.0, 1716284599.0, 1716284660.0, 1716284721.0, 1716284782.0, 1716284843.0, 1716284904.0, 1716284965.0, 1716285026.0, 1716285087.0, 1716
[2024-05-21 13:30:04] 2024-05-21 11:27:18,941 | INFO     | sum of square deviations: 348769330.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,941 | INFO     | sum of deviations: -8047003154.5
[2024-05-21 13:30:04] 2024-05-21 11:27:18,941 | INFO     | mean x: 1716287679.5
[2024-05-21 13:30:04] 2024-05-21 11:27:18,942 | INFO     | mean y: 2336795.0096153845
[2024-05-21 13:30:04] 2024-05-21 11:27:18,942 | INFO     | -- intersect: 39601496419.98576
[2024-05-21 13:30:04] 2024-05-21 11:27:18,942 | INFO     | intersect: 39601496419.98576
[2024-05-21 13:30:04] 2024-05-21 11:27:18,942 | INFO     | chi2: 0.8573045052406618
[2024-05-21 13:30:04] 2024-05-21 11:27:18,942 | INFO     | current chi2=0.8573045052406618 (change=63.62199057773057 %)
[2024-05-21 13:30:04] 2024-05-21 11:27:18,942 | INFO     | model: linear, x: [1716284843.0, 1716284904.0, 1716284965.0, 1716285026.0, 1716285087.0, 1716285148.0, 1716285209.0, 1716285270.0, 1716285331.0, 1716285392.0, 1716
[2024-05-21 13:30:04] 2024-05-21 11:27:18,942 | INFO     | sum of square deviations: 300842850.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | sum of deviations: -9525711688.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | mean x: 1716287832.0
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | mean y: 2341287.9494949495
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | -- intersect: 54345873338.834465
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | intersect: 54345873338.834465
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | chi2: 0.8136447374187201
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | current chi2=0.8136447374187201 (change=5.092679153678956 %)
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | left removable region: 30
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | model: linear, x: [1716285758.0, 1716285819.0, 1716285880.0, 1716285941.0, 1716286002.0, 1716286063.0, 1716286124.0, 1716286185.0, 1716286246.0, 1716286307.0, 1716
[2024-05-21 13:30:04] 2024-05-21 11:27:18,943 | INFO     | sum of square deviations: 147126479.5
[2024-05-21 13:30:04] 2024-05-21 11:27:18,944 | INFO     | sum of deviations: -1157899255.0000002
[2024-05-21 13:30:04] 2024-05-21 11:27:18,944 | INFO     | mean x: 1716288106.5
[2024-05-21 13:30:04] 2024-05-21 11:27:18,944 | INFO     | mean y: 2354388.846153846
[2024-05-21 13:30:04] 2024-05-21 11:27:18,944 | INFO     | -- intersect: 13509703484.912243
[2024-05-21 13:30:04] 2024-05-21 11:27:18,944 | INFO     | intersect: 13509703484.912243
[2024-05-21 13:30:04] 2024-05-21 11:27:18,944 | INFO     | chi2: 0.0066305583822502505
[2024-05-21 13:30:04] 2024-05-21 11:27:18,944 | INFO     | -- intersect: 13509703484.912243
[2024-05-21 13:30:04] 2024-05-21 11:27:18,944 | INFO     | current memory leak: -7.87 B/s (using 78 data points, chi2=0.01)
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | ..............................
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | . Timing measurements:
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | . get job = 0 s
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | . initial setup = 1 s
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | . payload setup = 5 s
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | . stage-in = 0 s
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | . payload execution = 6908 s
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | . stage-out = 0 s
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | . log creation = 0 s
[2024-05-21 13:30:04] 2024-05-21 11:27:18,945 | INFO     | ..............................
[2024-05-21 13:30:04] 2024-05-21 11:27:19,011 | INFO     | 
[2024-05-21 13:30:04] 2024-05-21 11:27:19,011 | INFO     | job summary report
[2024-05-21 13:30:04] 2024-05-21 11:27:19,011 | INFO     | --------------------------------------------------
[2024-05-21 13:30:04] 2024-05-21 11:27:19,011 | INFO     | PanDA job id: 6208728406
[2024-05-21 13:30:04] 2024-05-21 11:27:19,011 | INFO     | task id: 38776104
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | errors: (none)
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | pilot state: finished 
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | transexitcode: 0
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | exeerrorcode: 0
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | exeerrordiag: 
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | exitcode: 0
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | exitmsg: OK
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | cpuconsumptiontime: 25079 s
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | nevents: 400
[2024-05-21 13:30:04] 2024-05-21 11:27:19,012 | INFO     | neventsw: 0
[2024-05-21 13:30:04] 2024-05-21 11:27:19,013 | INFO     | pid: 1308876
[2024-05-21 13:30:04] 2024-05-21 11:27:19,013 | INFO     | pgrp: 1308876
[2024-05-21 13:30:04] 2024-05-21 11:27:19,013 | INFO     | corecount: 4
[2024-05-21 13:30:04] 2024-05-21 11:27:19,013 | INFO     | event service: False
[2024-05-21 13:30:04] 2024-05-21 11:27:19,013 | INFO     | sizes: {0: 2392049, 1: 2392248, 5: 2392454, 11: 2392510, 6917: 2419694, 6918: 2428862, 6922: 2428976}
[2024-05-21 13:30:04] 2024-05-21 11:27:19,013 | INFO     | --------------------------------------------------
[2024-05-21 13:30:04] 2024-05-21 11:27:19,013 | INFO     | 
[2024-05-21 13:30:04] 2024-05-21 11:27:19,013 | INFO     | executing command: ls -lF /scratch/boinc/var/slot104/slots/1
[2024-05-21 13:30:04] 2024-05-21 11:27:19,034 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,034 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,034 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,034 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,035 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,036 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-21 13:30:04] 2024-05-21 11:27:19,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,036 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-21 13:30:04] 2024-05-21 11:27:19,036 | INFO     | job 6208728406 has completed (purged errors)
[2024-05-21 13:30:04] 2024-05-21 11:27:19,036 | INFO     | overall cleanup function is called
[2024-05-21 13:30:04] 2024-05-21 11:27:19,412 | WARNING  | process 1308876 is no longer using CPU - aborting
[2024-05-21 13:30:04] 2024-05-21 11:27:19,413 | INFO     | aborting job monitoring since job object (job id=6208728406) has expired
[2024-05-21 13:30:04] 2024-05-21 11:27:20,043 | INFO     | --- collectZombieJob: --- 10, [1308876]
[2024-05-21 13:30:04] 2024-05-21 11:27:20,043 | INFO     | zombie collector waiting for pid 1308876
[2024-05-21 13:30:04] 2024-05-21 11:27:20,043 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-21 13:30:04] 2024-05-21 11:27:21,049 | INFO     | collected zombie processes
[2024-05-21 13:30:04] 2024-05-21 11:27:21,049 | INFO     | will now attempt to kill all subprocesses of pid=1308876
[2024-05-21 13:30:04] 2024-05-21 11:27:21,274 | INFO     | process IDs to be killed: [1308876] (in reverse order)
[2024-05-21 13:30:04] 2024-05-21 11:27:21,426 | WARNING  | found no corresponding commands to process id(s)
[2024-05-21 13:30:04] 2024-05-21 11:27:21,427 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-21 13:30:04] 2024-05-21 11:27:21,441 | INFO     | did not find any defunct processes belonging to 1308876
[2024-05-21 13:30:04] 2024-05-21 11:27:21,452 | INFO     | did not find any defunct processes belonging to 1308876
[2024-05-21 13:30:04] 2024-05-21 11:27:21,452 | INFO     | ready for new job
[2024-05-21 13:30:04] 2024-05-21 11:27:21,452 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-21 13:30:04] 2024-05-21 11:27:21,453 | INFO     | *************************************
[2024-05-21 13:30:04] 2024-05-21 11:27:21,453 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-21 13:30:04] 2024-05-21 11:27:21,453 | INFO     | *************************************
[2024-05-21 13:30:04] 2024-05-21 11:27:21,453 | INFO     | 
[2024-05-21 13:30:04] 2024-05-21 11:27:21,458 | INFO     | architecture information:
[2024-05-21 13:30:04] 2024-05-21 11:27:21,458 | INFO     | executing command: cat /etc/os-release
[2024-05-21 13:30:04] 2024-05-21 11:27:21,468 | INFO     | cat /etc/os-release:
[2024-05-21 13:30:04] NAME="CentOS Linux"
[2024-05-21 13:30:04] VERSION="7 (Core)"
[2024-05-21 13:30:04] ID="centos"
[2024-05-21 13:30:04] ID_LIKE="rhel fedora"
[2024-05-21 13:30:04] VERSION_ID="7"
[2024-05-21 13:30:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-21 13:30:04] ANSI_COLOR="0;31"
[2024-05-21 13:30:04] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-21 13:30:04] HOME_URL="https://www.centos.org/"
[2024-05-21 13:30:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-21 13:30:04] 
[2024-05-21 13:30:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-21 13:30:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-21 13:30:04] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-21 13:30:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-21 13:30:04] 
[2024-05-21 13:30:04] 2024-05-21 11:27:21,468 | INFO     | *************************************
[2024-05-21 13:30:04] 2024-05-21 11:27:21,970 | INFO     | executing command: df -mP /scratch/boinc/var/slot104/slots/1
[2024-05-21 13:30:04] 2024-05-21 11:27:21,991 | INFO     | sufficient remaining disk space (3089423663104 B)
[2024-05-21 13:30:04] 2024-05-21 11:27:21,992 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-21 13:30:04] 2024-05-21 11:27:21,992 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-21 13:30:04] 2024-05-21 11:27:21,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-21 13:30:04] 2024-05-21 11:27:22,018 | INFO     | found 0 job(s) in 20 queues
[2024-05-21 13:30:04] 2024-05-21 11:27:22,018 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-21 13:30:04] 2024-05-21 11:27:22,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-21 13:30:04] 2024-05-21 11:27:22,122 | INFO     | all payload control threads have been joined
[2024-05-21 13:30:04] 2024-05-21 11:27:22,425 | INFO     | all data control threads have been joined
[2024-05-21 13:30:04] 2024-05-21 11:27:22,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-21 13:30:04] 2024-05-21 11:27:22,921 | INFO     | aborting loop
[2024-05-21 13:30:04] 2024-05-21 11:27:22,998 | INFO     | [job] retrieve thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:23,027 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-21 13:30:04] 2024-05-21 11:27:23,106 | INFO     | [job] create_data_payload thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:23,128 | INFO     | [payload] control thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:23,314 | INFO     | [payload] validate_pre thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:23,407 | INFO     | [payload] validate_post thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:23,430 | INFO     | [data] control thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:23,628 | INFO     | all job control threads have been joined
[2024-05-21 13:30:04] 2024-05-21 11:27:23,691 | INFO     | [payload] failed_post thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:23,926 | INFO     | [job] job monitor thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:24,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-21 13:30:04] 2024-05-21 11:27:24,333 | INFO     | [payload] execute_payloads thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:24,398 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:24,398 | INFO     | [job] validate thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:24,404 | INFO     | [data] copytool_in thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:24,633 | INFO     | [job] control thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:25,025 | INFO     | [job] queue monitor thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:25,032 | INFO     | [data] copytool_out thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:25,998 | INFO     | [data] queue_monitor thread has finished
[2024-05-21 13:30:04] 2024-05-21 11:27:27,468 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 47097437848640)>', '<ExcThread(monitor, started 47097948681984)>']
[2024-05-21 13:30:04] 2024-05-21 11:27:28,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-21 13:30:04] 2024-05-21 11:27:28,048 | INFO     | [monitor] control thread has ended
[2024-05-21 13:30:04] 2024-05-21 11:27:32,493 | INFO     | all workflow threads have been joined
[2024-05-21 13:30:04] 2024-05-21 11:27:32,493 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-21 13:30:04] 2024-05-21 11:27:32,493 | INFO     | traces error code: 0
[2024-05-21 13:30:04] 2024-05-21 11:27:32,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-21 13:30:04] 2024-05-21 11:27:32,552 [wrapper] ==== pilot stdout END ====
[2024-05-21 13:30:04] 2024-05-21 11:27:32,554 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-21 13:30:04] 2024-05-21 11:27:32,556 [wrapper] pilotpid: 1300945
[2024-05-21 13:30:04] 2024-05-21 11:27:32,558 [wrapper] Pilot exit status: 0
[2024-05-21 13:30:04] 2024-05-21 11:27:32,566 [wrapper] pandaids: 6208728406
[2024-05-21 13:30:04] 2024-05-21 11:27:32,702 [wrapper] cleanup: SIGTERM to supervisor_pilot 1862541 1300946
[2024-05-21 13:30:04] 2024-05-21 11:27:32,704 [wrapper] Test setup, not cleaning
[2024-05-21 13:30:04] 2024-05-21 11:27:32,707 [wrapper] ==== wrapper stdout END ====
[2024-05-21 13:30:04] 2024-05-21 11:27:32,709 [wrapper] ==== wrapper stderr END ====
[2024-05-21 13:30:04] 2024-05-21 11:27:32,712 [wrapper] apfmon messages muted
[2024-05-21 13:30:04]  *** Error codes and diagnostics ***
[2024-05-21 13:30:04]     "exeErrorCode": 0,
[2024-05-21 13:30:04]     "exeErrorDiag": "",
[2024-05-21 13:30:04]     "pilotErrorCode": 0,
[2024-05-21 13:30:04]     "pilotErrorDiag": "",
[2024-05-21 13:30:04]  *** Listing of results directory ***
[2024-05-21 13:30:04] total 820136
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc    467845 May 18 13:46 pilot3.tar.gz
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc      5633 May 18 14:11 queuedata.json
[2024-05-21 13:30:04] -rwx------ 1 boinc boinc     32251 May 18 14:12 runpilot2-wrapper.sh
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc       100 May 21 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-21 13:30:04] -rwxr-xr-x 1 boinc boinc      7986 May 21 11:31 run_atlas
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc       105 May 21 11:31 job.xml
[2024-05-21 13:30:04] -rw-r--r-- 2 boinc boinc     17537 May 21 11:31 start_atlas.sh
[2024-05-21 13:30:04] drwxrwx--x 2 boinc boinc      4096 May 21 11:31 shared
[2024-05-21 13:30:04] -rw-r--r-- 2 boinc boinc    479999 May 21 11:31 input.tar.gz
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc      6646 May 21 11:31 init_data.xml
[2024-05-21 13:30:04] -rw-r--r-- 2 boinc boinc 603515443 May 21 11:31 EVNT.38776100._000552.pool.root.1
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc         0 May 21 11:31 boinc_lockfile
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc      2645 May 21 11:31 pandaJob.out
[2024-05-21 13:30:04] -rw------- 1 boinc boinc       424 May 21 11:31 setup.sh.local
[2024-05-21 13:30:04] -rw------- 1 boinc boinc   1013561 May 21 11:31 agis_schedconf.cvmfs.json
[2024-05-21 13:30:04] -rw------- 1 boinc boinc         0 May 21 11:31 agis_ddmendpoints.agis.ALL.json
[2024-05-21 13:30:04] -rw------- 1 boinc boinc   1324700 May 21 11:31 cric_ddmendpoints.json
[2024-05-21 13:30:04] drwx------ 4 boinc boinc      4096 May 21 11:31 pilot3
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc       530 May 21 13:26 boinc_task_state.xml
[2024-05-21 13:30:04] -rw------- 1 boinc boinc 230844633 May 21 13:26 HITS.38776104._017216.pool.root.1
[2024-05-21 13:30:04] -rw------- 1 boinc boinc        95 May 21 13:26 pilot_heartbeat.json
[2024-05-21 13:30:04] -rw------- 1 boinc boinc      1042 May 21 13:27 memory_monitor_summary.json
[2024-05-21 13:30:04] -rw------- 1 boinc boinc    264282 May 21 13:27 log.38776104._017216.job.log.tgz.1
[2024-05-21 13:30:04] -rw------- 1 boinc boinc      7723 May 21 13:27 heartbeat.json
[2024-05-21 13:30:04] -rw------- 1 boinc boinc      4223 May 21 13:27 pilotlog.txt
[2024-05-21 13:30:04] -rw------- 1 boinc boinc    703180 May 21 13:27 log.38776104._017216.job.log.1
[2024-05-21 13:30:04] -rw------- 1 boinc boinc       357 May 21 13:27 output.list
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc       620 May 21 13:27 runtime_log
[2024-05-21 13:30:04] -rw------- 1 boinc boinc    983040 May 21 13:27 result.tar.gz
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc     11428 May 21 13:27 runtime_log.err
[2024-05-21 13:30:04] -rw------- 1 boinc boinc       655 May 21 13:27 RySKDmJ6XS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmAaSKDmv5wsfn.diag
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc        27 May 21 13:29 wrapper_checkpoint.txt
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc      8192 May 21 13:30 boinc_mmap_file
[2024-05-21 13:30:04] -rw-r--r-- 1 boinc boinc     21307 May 21 13:30 stderr.txt
[2024-05-21 13:30:04] HITS file was successfully produced:
[2024-05-21 13:30:04] -rw------- 1 boinc boinc 230844633 May 21 13:26 shared/HITS.pool.root.1
[2024-05-21 13:30:04]  *** Contents of shared directory: ***
[2024-05-21 13:30:04] total 816268
[2024-05-21 13:30:04] -rw-r--r-- 2 boinc boinc     17537 May 21 11:31 start_atlas.sh
[2024-05-21 13:30:04] -rw-r--r-- 2 boinc boinc    479999 May 21 11:31 input.tar.gz
[2024-05-21 13:30:04] -rw-r--r-- 2 boinc boinc 603515443 May 21 11:31 ATLAS.root_0
[2024-05-21 13:30:04] -rw------- 1 boinc boinc 230844633 May 21 13:26 HITS.pool.root.1
[2024-05-21 13:30:04] -rw------- 1 boinc boinc    983040 May 21 13:27 result.tar.gz
13:30:05 (1296311): run_atlas exited; CPU time 24890.432473
13:30:05 (1296311): called boinc_finish(0)

</stderr_txt>
]]>

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