Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
16:43:43 (79394): wrapper (7.7.26015): starting
16:43:43 (79394): wrapper: running run_atlas (--nthreads 12)
[2024-05-19 16:43:43] Arguments: --nthreads 12
[2024-05-19 16:43:43] Threads: 12
[2024-05-19 16:43:43] Checking for CVMFS
[2024-05-19 16:43:43] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-19 16:43:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-19 16:43:43] Running cvmfs_config stat atlas.cern.ch
[2024-05-19 16:43:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-19 16:43:43] 2.10.1.0 226310 187031 194284 132929 2 131 41535955 45568000 6038 130560 0 626807519 99.734 451783095 14684 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2024-05-19 16:43:43] CVMFS is ok
[2024-05-19 16:43:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-19 16:43:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-19 16:43:44] Further information can be found at the LHC@home message board.
[2024-05-19 16:43:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-19 16:43:44] Checking for apptainer binary...
[2024-05-19 16:43:44] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-19 16:43:44] Running /usr/bin/apptainer --version
[2024-05-19 16:43:44] apptainer version 1.1.8-1.el7
[2024-05-19 16:43:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-19 16:43:45] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0046.triumf.lcg
[2024-05-19 16:43:45] apptainer works
[2024-05-19 16:43:45] Set ATHENA_PROC_NUMBER=12
[2024-05-19 16:43:45] Set ATHENA_CORE_NUMBER=12
[2024-05-19 16:43:45] Starting ATLAS job with PandaID=6208728220
[2024-05-19 16:43:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-19 18:42:41]  *** The last 200 lines of the pilot log: ***
[2024-05-19 18:42:41]  domain=
[2024-05-19 18:42:41]  filesize=392624
[2024-05-19 18:42:41]  filetype=log
[2024-05-19 18:42:41]  guid=c734a3e8-25ca-4bc6-8d55-2e2bec309351
[2024-05-19 18:42:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-19 18:42:41]  is_tar=False
[2024-05-19 18:42:41]  lfn=log.38776104._017132.job.log.tgz.1
[2024-05-19 18:42:41]  mtime=0
[2024-05-19 18:42:41]  protocol_id=None
[2024-05-19 18:42:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-19 18:42:41]  replicas=None
[2024-05-19 18:42:41]  scope=mc23_13p6TeV
[2024-05-19 18:42:41]  status=None
[2024-05-19 18:42:41]  status_code=0
[2024-05-19 18:42:41]  storage_token=
[2024-05-19 18:42:41]  surl=/home/boinc/slots/0/PanDA_Pilot-6208728220/log.38776104._017132.job.log.tgz.1
[2024-05-19 18:42:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/9a/log.38776104._017132.job.log.tgz.1
[2024-05-19 18:42:41]  workdir=None
[2024-05-19 18:42:41] ]
[2024-05-19 18:42:41] 2024-05-20 01:42:13,843 | INFO     | transferring file log.38776104._017132.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208728220/log.38776104._017132.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-19 18:42:41] 2024-05-20 01:42:13,843 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208728220/log.38776104._017132.job.log.tgz.1 /home/boinc/slots/0/log.38776104._017132.job.log.t
[2024-05-19 18:42:41] 2024-05-20 01:42:13,980 | INFO     | adding to output.list: log.38776104._017132.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d4/9a/log.38776104._017132.job.log.tg
[2024-05-19 18:42:41] 2024-05-20 01:42:13,981 | INFO     | summary of transferred files:
[2024-05-19 18:42:41] 2024-05-20 01:42:13,981 | INFO     |  -- lfn=log.38776104._017132.job.log.tgz.1, status_code=0, status=transferred
[2024-05-19 18:42:41] 2024-05-20 01:42:13,982 | INFO     | stage-out finished correctly
[2024-05-19 18:42:41] 2024-05-20 01:42:15,528 | INFO     | monitor loop #483: job 0:6208728220 is in state 'finished'
[2024-05-19 18:42:41] 2024-05-20 01:42:15,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 18:42:41] 2024-05-20 01:42:16,059 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-19 18:42:41] 2024-05-20 01:42:16,139 | INFO     | job 6208728220 has state=finished
[2024-05-19 18:42:41] 2024-05-20 01:42:16,139 | INFO     | preparing for final server update for job 6208728220 in state='finished'
[2024-05-19 18:42:41] 2024-05-20 01:42:16,140 | INFO     | this job has now completed (state=finished)
[2024-05-19 18:42:41] 2024-05-20 01:42:16,140 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-19 18:42:41] 2024-05-20 01:42:16,140 | INFO     | job 6208728220 has finished - writing final server update
[2024-05-19 18:42:41] 2024-05-20 01:42:16,140 | INFO     | total number of processed events: 400 (read)
[2024-05-19 18:42:41] 2024-05-20 01:42:16,143 | INFO     | executing command: lscpu
[2024-05-19 18:42:41] 2024-05-20 01:42:16,522 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-19 18:42:41] 2024-05-20 01:42:16,522 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-19 18:42:41] 2024-05-20 01:42:16,559 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-19 18:42:41] 2024-05-20 01:42:18,031 | INFO     | monitor loop #484: job 0:6208728220 is in state 'finished'
[2024-05-19 18:42:41] 2024-05-20 01:42:18,031 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-19 18:42:41] 2024-05-20 01:42:19,593 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-19 18:42:41] 2024-05-20 01:42:19,593 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208728220/memory_monitor_summary.json (trf name=prmon)
[2024-05-19 18:42:41] 2024-05-20 01:42:19,594 | INFO     | extracted standard info from prmon json
[2024-05-19 18:42:41] 2024-05-20 01:42:19,594 | INFO     | extracted standard memory fields from prmon json
[2024-05-19 18:42:41] 2024-05-20 01:42:19,594 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-19 18:42:41] 2024-05-20 01:42:19,594 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-19 18:42:41] 2024-05-20 01:42:19,596 | INFO     | fitting pss+swap vs Time
[2024-05-19 18:42:41] 2024-05-20 01:42:19,597 | INFO     | current chi2=5.17427923657163 (change=0.6001649997941527 %)
[2024-05-19 18:42:41] 2024-05-20 01:42:19,597 | INFO     | right removable region: 110
[2024-05-19 18:42:41] 2024-05-20 01:42:19,597 | INFO     | current chi2=2.473015222734896 (change=52.4924547257872 %)
[2024-05-19 18:42:41] 2024-05-20 01:42:19,597 | INFO     | current chi2=1.0389891078275506 (change=57.986950574508086 %)
[2024-05-19 18:42:41] 2024-05-20 01:42:19,598 | INFO     | current chi2=0.17648560296151183 (change=83.0137196211296 %)
[2024-05-19 18:42:41] 2024-05-20 01:42:19,598 | INFO     | current chi2=0.07931113651821406 (change=55.06084621785817 %)
[2024-05-19 18:42:41] 2024-05-20 01:42:19,598 | INFO     | current chi2=0.07805197000227442 (change=1.5876288894819612 %)
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | left removable region: 50
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | current memory leak: 12.17 B/s (using 60 data points, chi2=0.00)
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | ..............................
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | . Timing measurements:
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | . get job = 0 s
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | . initial setup = 2 s
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | . payload setup = 4 s
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | . stage-in = 0 s
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | . payload execution = 7072 s
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | . stage-out = 0 s
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | . log creation = 0 s
[2024-05-19 18:42:41] 2024-05-20 01:42:19,599 | INFO     | ..............................
[2024-05-19 18:42:41] 2024-05-20 01:42:20,109 | INFO     | 
[2024-05-19 18:42:41] 2024-05-20 01:42:20,109 | INFO     | job summary report
[2024-05-19 18:42:41] 2024-05-20 01:42:20,109 | INFO     | --------------------------------------------------
[2024-05-19 18:42:41] 2024-05-20 01:42:20,109 | INFO     | PanDA job id: 6208728220
[2024-05-19 18:42:41] 2024-05-20 01:42:20,109 | INFO     | task id: 38776104
[2024-05-19 18:42:41] 2024-05-20 01:42:20,109 | INFO     | errors: (none)
[2024-05-19 18:42:41] 2024-05-20 01:42:20,109 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | pilot state: finished 
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | transexitcode: 0
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | exeerrorcode: 0
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | exeerrordiag: 
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | exitcode: 0
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | exitmsg: OK
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | cpuconsumptiontime: 28330 s
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | nevents: 400
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | neventsw: 0
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | pid: 101876
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | pgrp: 101876
[2024-05-19 18:42:41] 2024-05-20 01:42:20,110 | INFO     | corecount: 12
[2024-05-19 18:42:41] 2024-05-20 01:42:20,111 | INFO     | event service: False
[2024-05-19 18:42:41] 2024-05-20 01:42:20,111 | INFO     | sizes: {0: 2392078, 1: 2392277, 4: 2392483, 11: 2392511, 7082: 2419649, 7085: 2428603, 7087: 2428787, 7090: 2428957}
[2024-05-19 18:42:41] 2024-05-20 01:42:20,111 | INFO     | --------------------------------------------------
[2024-05-19 18:42:41] 2024-05-20 01:42:20,111 | INFO     | 
[2024-05-19 18:42:41] 2024-05-20 01:42:20,111 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-19 18:42:41] 2024-05-20 01:42:20,141 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,141 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,141 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,141 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,141 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,142 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,143 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,143 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-19 18:42:41] 2024-05-20 01:42:20,143 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,143 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-19 18:42:41] 2024-05-20 01:42:20,143 | INFO     | job 6208728220 has completed (purged errors)
[2024-05-19 18:42:41] 2024-05-20 01:42:20,143 | INFO     | overall cleanup function is called
[2024-05-19 18:42:41] 2024-05-20 01:42:21,151 | INFO     | --- collectZombieJob: --- 10, [101876]
[2024-05-19 18:42:41] 2024-05-20 01:42:21,152 | INFO     | zombie collector waiting for pid 101876
[2024-05-19 18:42:41] 2024-05-20 01:42:21,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-19 18:42:41] 2024-05-20 01:42:22,153 | INFO     | collected zombie processes
[2024-05-19 18:42:41] 2024-05-20 01:42:22,153 | INFO     | will now attempt to kill all subprocesses of pid=101876
[2024-05-19 18:42:41] 2024-05-20 01:42:22,276 | INFO     | process IDs to be killed: [101876] (in reverse order)
[2024-05-19 18:42:41] 2024-05-20 01:42:22,383 | WARNING  | found no corresponding commands to process id(s)
[2024-05-19 18:42:41] 2024-05-20 01:42:22,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-19 18:42:41] 2024-05-20 01:42:22,390 | INFO     | did not find any defunct processes belonging to 101876
[2024-05-19 18:42:41] 2024-05-20 01:42:22,396 | INFO     | did not find any defunct processes belonging to 101876
[2024-05-19 18:42:41] 2024-05-20 01:42:22,396 | INFO     | ready for new job
[2024-05-19 18:42:41] 2024-05-20 01:42:22,396 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-19 18:42:41] 2024-05-20 01:42:22,398 | INFO     | *************************************
[2024-05-19 18:42:41] 2024-05-20 01:42:22,398 | INFO     | ***  PanDA Pilot version 3.7.2.4  ***
[2024-05-19 18:42:41] 2024-05-20 01:42:22,398 | INFO     | *************************************
[2024-05-19 18:42:41] 2024-05-20 01:42:22,398 | INFO     | 
[2024-05-19 18:42:41] 2024-05-20 01:42:22,402 | INFO     | architecture information:
[2024-05-19 18:42:41] 2024-05-20 01:42:22,402 | INFO     | executing command: cat /etc/os-release
[2024-05-19 18:42:41] 2024-05-20 01:42:22,423 | INFO     | cat /etc/os-release:
[2024-05-19 18:42:41] NAME="CentOS Linux"
[2024-05-19 18:42:41] VERSION="7 (Core)"
[2024-05-19 18:42:41] ID="centos"
[2024-05-19 18:42:41] ID_LIKE="rhel fedora"
[2024-05-19 18:42:41] VERSION_ID="7"
[2024-05-19 18:42:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-19 18:42:41] ANSI_COLOR="0;31"
[2024-05-19 18:42:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-19 18:42:41] HOME_URL="https://www.centos.org/"
[2024-05-19 18:42:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-19 18:42:41] 
[2024-05-19 18:42:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-19 18:42:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-19 18:42:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-19 18:42:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-19 18:42:41] 
[2024-05-19 18:42:41] 2024-05-20 01:42:22,423 | INFO     | *************************************
[2024-05-19 18:42:41] 2024-05-20 01:42:22,926 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-19 18:42:41] 2024-05-20 01:42:22,954 | INFO     | sufficient remaining disk space (2128250667008 B)
[2024-05-19 18:42:41] 2024-05-20 01:42:22,954 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-19 18:42:41] 2024-05-20 01:42:22,955 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-19 18:42:41] 2024-05-20 01:42:22,955 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-19 18:42:41] 2024-05-20 01:42:22,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-19 18:42:41] 2024-05-20 01:42:22,955 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-19 18:42:41] 2024-05-20 01:42:22,956 | INFO     | found 0 job(s) in 20 queues
[2024-05-19 18:42:41] 2024-05-20 01:42:22,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-19 18:42:41] 2024-05-20 01:42:22,957 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-19 18:42:41] 2024-05-20 01:42:23,003 | INFO     | all job control threads have been joined
[2024-05-19 18:42:41] 2024-05-20 01:42:23,040 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-19 18:42:41] 2024-05-20 01:42:23,041 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-19 18:42:41] 2024-05-20 01:42:23,041 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-19 18:42:41] 2024-05-20 01:42:23,041 | INFO     | will abort loop
[2024-05-19 18:42:41] 2024-05-20 01:42:23,459 | INFO     | all payload control threads have been joined
[2024-05-19 18:42:41] 2024-05-20 01:42:23,656 | INFO     | all data control threads have been joined
[2024-05-19 18:42:41] 2024-05-20 01:42:23,960 | INFO     | [job] retrieve thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:23,979 | INFO     | [payload] validate_post thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,009 | INFO     | [job] control thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,011 | INFO     | [payload] failed_post thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,045 | INFO     | [job] job monitor thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,235 | INFO     | [payload] validate_pre thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,464 | INFO     | [payload] control thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,573 | INFO     | [job] create_data_payload thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,659 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-19 18:42:41] 2024-05-20 01:42:24,662 | INFO     | [data] control thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,685 | INFO     | [payload] execute_payloads thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,945 | INFO     | [job] validate thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:24,960 | INFO     | [data] copytool_out thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:25,156 | INFO     | [data] copytool_in thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:25,665 | INFO     | [job] queue monitor thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:26,962 | INFO     | [data] queue_monitor thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:33,874 | INFO     | job.realtimelogging is not enabled
[2024-05-19 18:42:41] 2024-05-20 01:42:34,880 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-19 18:42:41] 2024-05-20 01:42:34,889 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140554614769472)>', '<ExcThread(monitor, started 140554188867328)>']
[2024-05-19 18:42:41] 2024-05-20 01:42:35,015 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-19 18:42:41] 2024-05-20 01:42:35,016 | INFO     | [monitor] control thread has ended
[2024-05-19 18:42:41] 2024-05-20 01:42:39,914 | INFO     | all workflow threads have been joined
[2024-05-19 18:42:41] 2024-05-20 01:42:39,914 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-19 18:42:41] 2024-05-20 01:42:39,915 | INFO     | traces error code: 0
[2024-05-19 18:42:41] 2024-05-20 01:42:39,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-19 18:42:41] 2024-05-20 01:42:40,011 [wrapper] ==== pilot stdout END ====
[2024-05-19 18:42:41] 2024-05-20 01:42:40,075 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-19 18:42:41] 2024-05-20 01:42:40,078 [wrapper] pilotpid: 83562
[2024-05-19 18:42:41] 2024-05-20 01:42:40,081 [wrapper] Pilot exit status: 0
[2024-05-19 18:42:41] 2024-05-20 01:42:40,092 [wrapper] pandaids: 6208728220
[2024-05-19 18:42:41] 2024-05-20 01:42:40,164 [wrapper] cleanup: SIGTERM to supervisor_pilot 242365 83563
[2024-05-19 18:42:41] 2024-05-20 01:42:40,168 [wrapper] Test setup, not cleaning
[2024-05-19 18:42:41] 2024-05-20 01:42:40,171 [wrapper] ==== wrapper stdout END ====
[2024-05-19 18:42:41] 2024-05-20 01:42:40,175 [wrapper] ==== wrapper stderr END ====
[2024-05-19 18:42:41] 2024-05-20 01:42:40,181 [wrapper] apfmon messages muted
[2024-05-19 18:42:41]  *** Error codes and diagnostics ***
[2024-05-19 18:42:41]     "exeErrorCode": 0,
[2024-05-19 18:42:41]     "exeErrorDiag": "",
[2024-05-19 18:42:41]     "pilotErrorCode": 0,
[2024-05-19 18:42:41]     "pilotErrorDiag": "",
[2024-05-19 18:42:41]  *** Listing of results directory ***
[2024-05-19 18:42:41] total 821744
[2024-05-19 18:42:41] -rwx------ 1 boinc boinc     32251 May 18 05:00 runpilot2-wrapper.sh
[2024-05-19 18:42:41] -rw------- 1 boinc boinc    468593 May 18 05:00 pilot3.tar.gz
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc      5633 May 18 05:00 queuedata.json
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc       100 May 19 16:43 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-19 18:42:41] -rwxr-xr-x 1 boinc boinc      7986 May 19 16:43 run_atlas
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc       105 May 19 16:43 job.xml
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc      6628 May 19 16:43 init_data.xml
[2024-05-19 18:42:41] -rw-r--r-- 2 boinc boinc 599113645 May 19 16:43 EVNT.38776100._000355.pool.root.1
[2024-05-19 18:42:41] -rw-r--r-- 2 boinc boinc     17537 May 19 16:43 start_atlas.sh
[2024-05-19 18:42:41] drwxrwx--x 2 boinc boinc      4096 May 19 16:43 shared
[2024-05-19 18:42:41] -rw-r--r-- 2 boinc boinc    481394 May 19 16:43 input.tar.gz
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc         0 May 19 16:43 boinc_lockfile
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc      2643 May 19 16:43 pandaJob.out
[2024-05-19 18:42:41] -rw------- 1 boinc boinc       424 May 19 16:43 setup.sh.local
[2024-05-19 18:42:41] -rw------- 1 boinc boinc   1013669 May 19 16:43 agis_schedconf.cvmfs.json
[2024-05-19 18:42:41] -rw------- 1 boinc boinc         0 May 19 16:43 agis_ddmendpoints.agis.ALL.json
[2024-05-19 18:42:41] -rw------- 1 boinc boinc   1324701 May 19 16:43 cric_ddmendpoints.json
[2024-05-19 18:42:41] drwx------ 6 boinc boinc      4096 May 19 16:43 pilot3
[2024-05-19 18:42:41] -rw------- 1 boinc boinc 236836639 May 19 18:41 HITS.38776104._017132.pool.root.1
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc       530 May 19 18:41 boinc_task_state.xml
[2024-05-19 18:42:41] -rw------- 1 boinc boinc        95 May 19 18:42 pilot_heartbeat.json
[2024-05-19 18:42:41] -rw------- 1 boinc boinc      1071 May 19 18:42 memory_monitor_summary.json
[2024-05-19 18:42:41] -rw------- 1 boinc boinc    392624 May 19 18:42 log.38776104._017132.job.log.tgz.1
[2024-05-19 18:42:41] -rw------- 1 boinc boinc      7746 May 19 18:42 heartbeat.json
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc        27 May 19 18:42 wrapper_checkpoint.txt
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc      8192 May 19 18:42 boinc_mmap_file
[2024-05-19 18:42:41] -rw------- 1 boinc boinc      4591 May 19 18:42 pilotlog.txt
[2024-05-19 18:42:41] -rw------- 1 boinc boinc    599247 May 19 18:42 log.38776104._017132.job.log.1
[2024-05-19 18:42:41] -rw------- 1 boinc boinc       357 May 19 18:42 output.list
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc       620 May 19 18:42 runtime_log
[2024-05-19 18:42:41] -rw------- 1 boinc boinc   1013760 May 19 18:42 result.tar.gz
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc     11286 May 19 18:42 runtime_log.err
[2024-05-19 18:42:41] -rw------- 1 boinc boinc       654 May 19 18:42 2TNODmAvXS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmoyLKDm5ShWPo.diag
[2024-05-19 18:42:41] -rw-r--r-- 1 boinc boinc     21631 May 19 18:42 stderr.txt
[2024-05-19 18:42:41] HITS file was successfully produced:
[2024-05-19 18:42:41] -rw------- 1 boinc boinc 236836639 May 19 18:41 shared/HITS.pool.root.1
[2024-05-19 18:42:41]  *** Contents of shared directory: ***
[2024-05-19 18:42:41] total 817852
[2024-05-19 18:42:41] -rw-r--r-- 2 boinc boinc 599113645 May 19 16:43 ATLAS.root_0
[2024-05-19 18:42:41] -rw-r--r-- 2 boinc boinc     17537 May 19 16:43 start_atlas.sh
[2024-05-19 18:42:41] -rw-r--r-- 2 boinc boinc    481394 May 19 16:43 input.tar.gz
[2024-05-19 18:42:41] -rw------- 1 boinc boinc 236836639 May 19 18:41 HITS.pool.root.1
[2024-05-19 18:42:41] -rw------- 1 boinc boinc   1013760 May 19 18:42 result.tar.gz
18:42:42 (79394): run_atlas exited; CPU time 28189.260787
18:42:42 (79394): called boinc_finish(0)

</stderr_txt>
]]>

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