Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:29:48 (2615445): wrapper (7.7.26015): starting
10:29:48 (2615445): wrapper: running run_atlas (--nthreads 12)
[2024-05-20 10:29:48] Arguments: --nthreads 12
[2024-05-20 10:29:48] Threads: 12
[2024-05-20 10:29:48] Checking for CVMFS
[2024-05-20 10:29:49] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-20 10:29:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-20 10:29:49] Running cvmfs_config stat atlas.cern.ch
[2024-05-20 10:29:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-20 10:29:49] 2.11.3.0 11199 15761 110508 132943 2 56 44741594 46080000 911 130560 0 21860429 99.965 2351931 37908 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2024-05-20 10:29:49] CVMFS is ok
[2024-05-20 10:29:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-20 10:29:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-20 10:29:49] Further information can be found at the LHC@home message board.
[2024-05-20 10:29:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-20 10:29:49] Checking for apptainer binary...
[2024-05-20 10:29:49] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-20 10:29:49] Running /usr/bin/apptainer --version
[2024-05-20 10:29:49] apptainer version 1.3.1-1.el7
[2024-05-20 10:29:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-20 10:29:49] minis01.farm.particle.cz
[2024-05-20 10:29:49] apptainer works
[2024-05-20 10:29:49] Set ATHENA_PROC_NUMBER=12
[2024-05-20 10:29:49] Set ATHENA_CORE_NUMBER=12
[2024-05-20 10:29:49] Starting ATLAS job with PandaID=6208719170
[2024-05-20 10:29:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-20 12:26:06]  *** The last 200 lines of the pilot log: ***
[2024-05-20 12:26:06] 2024-05-20 10:25:54,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-20 12:26:06] 2024-05-20 10:25:54,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-20 12:26:06] 2024-05-20 10:25:54,011 | INFO     | fitting pss+swap vs Time
[2024-05-20 12:26:06] 2024-05-20 10:25:54,012 | INFO     | model: linear, x: [1716193826.0, 1716193887.0, 1716193948.0, 1716194009.0, 1716194070.0, 1716194131.0, 1716194192.0, 1716194253.0, 1716194314.0, 1716194375.0, 1716
[2024-05-20 12:26:06] 2024-05-20 10:25:54,012 | INFO     | sum of square deviations: 459366752.5
[2024-05-20 12:26:06] 2024-05-20 10:25:54,013 | INFO     | sum of deviations: 45133712516.50001
[2024-05-20 12:26:06] 2024-05-20 10:25:54,013 | INFO     | mean x: 1716197272.5
[2024-05-20 12:26:06] 2024-05-20 10:25:54,013 | INFO     | mean y: 2624544.0614035088
[2024-05-20 12:26:06] 2024-05-20 10:25:54,013 | INFO     | -- intersect: -168617228540.79245
[2024-05-20 12:26:06] 2024-05-20 10:25:54,013 | INFO     | intersect: -168617228540.79245
[2024-05-20 12:26:06] 2024-05-20 10:25:54,013 | INFO     | chi2: 5.132007875992693
[2024-05-20 12:26:06] 2024-05-20 10:25:54,014 | INFO     | model: linear, x: [1716193826.0, 1716193887.0, 1716193948.0, 1716194009.0, 1716194070.0, 1716194131.0, 1716194192.0, 1716194253.0, 1716194314.0, 1716194375.0, 1716
[2024-05-20 12:26:06] 2024-05-20 10:25:54,014 | INFO     | sum of square deviations: 401533110.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,014 | INFO     | sum of deviations: 51438933322.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,014 | INFO     | mean x: 1716197120.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,015 | INFO     | mean y: 2640360.4954128442
[2024-05-20 12:26:06] 2024-05-20 10:25:54,015 | INFO     | -- intersect: -219853075206.9915
[2024-05-20 12:26:06] 2024-05-20 10:25:54,015 | INFO     | intersect: -219853075206.9915
[2024-05-20 12:26:06] 2024-05-20 10:25:54,015 | INFO     | chi2: 4.310506961385441
[2024-05-20 12:26:06] 2024-05-20 10:25:54,015 | INFO     | current chi2=4.310506961385441 (change=16.007397776028316 %)
[2024-05-20 12:26:06] 2024-05-20 10:25:54,015 | INFO     | right removable region: 108
[2024-05-20 12:26:06] 2024-05-20 10:25:54,015 | INFO     | model: linear, x: [1716194131.0, 1716194192.0, 1716194253.0, 1716194314.0, 1716194375.0, 1716194436.0, 1716194497.0, 1716194558.0, 1716194619.0, 1716194680.0, 1716
[2024-05-20 12:26:06] 2024-05-20 10:25:54,016 | INFO     | sum of square deviations: 401533110.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,016 | INFO     | sum of deviations: 15080969610.000004
[2024-05-20 12:26:06] 2024-05-20 10:25:54,016 | INFO     | mean x: 1716197425.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,016 | INFO     | mean y: 2703394.1743119266
[2024-05-20 12:26:06] 2024-05-20 10:25:54,017 | INFO     | -- intersect: -64455047577.30912
[2024-05-20 12:26:06] 2024-05-20 10:25:54,017 | INFO     | intersect: -64455047577.30912
[2024-05-20 12:26:06] 2024-05-20 10:25:54,017 | INFO     | chi2: 2.591638914968328
[2024-05-20 12:26:06] 2024-05-20 10:25:54,017 | INFO     | current chi2=2.591638914968328 (change=49.500488354823055 %)
[2024-05-20 12:26:06] 2024-05-20 10:25:54,017 | INFO     | model: linear, x: [1716194436.0, 1716194497.0, 1716194558.0, 1716194619.0, 1716194680.0, 1716194741.0, 1716194802.0, 1716194863.0, 1716194924.0, 1716194985.0, 1716
[2024-05-20 12:26:06] 2024-05-20 10:25:54,017 | INFO     | sum of square deviations: 348769330.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,018 | INFO     | sum of deviations: -8648185269.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,018 | INFO     | mean x: 1716197577.5
[2024-05-20 12:26:06] 2024-05-20 10:25:54,018 | INFO     | mean y: 2772012.403846154
[2024-05-20 12:26:06] 2024-05-20 10:25:54,018 | INFO     | -- intersect: 42558103951.79481
[2024-05-20 12:26:06] 2024-05-20 10:25:54,018 | INFO     | intersect: 42558103951.79481
[2024-05-20 12:26:06] 2024-05-20 10:25:54,019 | INFO     | chi2: 1.099842497997257
[2024-05-20 12:26:06] 2024-05-20 10:25:54,019 | INFO     | current chi2=1.099842497997257 (change=57.561892914750516 %)
[2024-05-20 12:26:06] 2024-05-20 10:25:54,019 | INFO     | model: linear, x: [1716194741.0, 1716194802.0, 1716194863.0, 1716194924.0, 1716194985.0, 1716195046.0, 1716195107.0, 1716195168.0, 1716195229.0, 1716195290.0, 1716
[2024-05-20 12:26:06] 2024-05-20 10:25:54,019 | INFO     | sum of square deviations: 300842850.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,020 | INFO     | sum of deviations: -15439658638.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,020 | INFO     | mean x: 1716197730.0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,020 | INFO     | mean y: 2793453.9696969697
[2024-05-20 12:26:06] 2024-05-20 10:25:54,020 | INFO     | -- intersect: 88080363210.10814
[2024-05-20 12:26:06] 2024-05-20 10:25:54,020 | INFO     | intersect: 88080363210.10814
[2024-05-20 12:26:06] 2024-05-20 10:25:54,020 | INFO     | chi2: 0.919990887128664
[2024-05-20 12:26:06] 2024-05-20 10:25:54,020 | INFO     | current chi2=0.919990887128664 (change=16.352487851314287 %)
[2024-05-20 12:26:06] 2024-05-20 10:25:54,020 | INFO     | left removable region: 30
[2024-05-20 12:26:06] 2024-05-20 10:25:54,021 | INFO     | model: linear, x: [1716195656.0, 1716195717.0, 1716195778.0, 1716195839.0, 1716195900.0, 1716195961.0, 1716196022.0, 1716196083.0, 1716196144.0, 1716196205.0, 1716
[2024-05-20 12:26:06] 2024-05-20 10:25:54,021 | INFO     | sum of square deviations: 147126479.5
[2024-05-20 12:26:06] 2024-05-20 10:25:54,021 | INFO     | sum of deviations: -2665238382.4999995
[2024-05-20 12:26:06] 2024-05-20 10:25:54,021 | INFO     | mean x: 1716198004.5
[2024-05-20 12:26:06] 2024-05-20 10:25:54,021 | INFO     | mean y: 2799563.576923077
[2024-05-20 12:26:06] 2024-05-20 10:25:54,021 | INFO     | -- intersect: 31092218742.966087
[2024-05-20 12:26:06] 2024-05-20 10:25:54,022 | INFO     | intersect: 31092218742.966087
[2024-05-20 12:26:06] 2024-05-20 10:25:54,022 | INFO     | chi2: 0.01840277375938087
[2024-05-20 12:26:06] 2024-05-20 10:25:54,022 | INFO     | -- intersect: 31092218742.966087
[2024-05-20 12:26:06] 2024-05-20 10:25:54,022 | INFO     | current memory leak: -18.12 B/s (using 78 data points, chi2=0.02)
[2024-05-20 12:26:06] 2024-05-20 10:25:54,022 | INFO     | ..............................
[2024-05-20 12:26:06] 2024-05-20 10:25:54,023 | INFO     | . Timing measurements:
[2024-05-20 12:26:06] 2024-05-20 10:25:54,023 | INFO     | . get job = 0 s
[2024-05-20 12:26:06] 2024-05-20 10:25:54,023 | INFO     | . initial setup = 1 s
[2024-05-20 12:26:06] 2024-05-20 10:25:54,023 | INFO     | . payload setup = 5 s
[2024-05-20 12:26:06] 2024-05-20 10:25:54,023 | INFO     | . stage-in = 0 s
[2024-05-20 12:26:06] 2024-05-20 10:25:54,023 | INFO     | . payload execution = 6918 s
[2024-05-20 12:26:06] 2024-05-20 10:25:54,023 | INFO     | . stage-out = 1 s
[2024-05-20 12:26:06] 2024-05-20 10:25:54,023 | INFO     | . log creation = 0 s
[2024-05-20 12:26:06] 2024-05-20 10:25:54,023 | INFO     | ..............................
[2024-05-20 12:26:06] 2024-05-20 10:25:54,134 | INFO     | 
[2024-05-20 12:26:06] 2024-05-20 10:25:54,134 | INFO     | job summary report
[2024-05-20 12:26:06] 2024-05-20 10:25:54,135 | INFO     | --------------------------------------------------
[2024-05-20 12:26:06] 2024-05-20 10:25:54,135 | INFO     | PanDA job id: 6208719170
[2024-05-20 12:26:06] 2024-05-20 10:25:54,135 | INFO     | task id: 38920982
[2024-05-20 12:26:06] 2024-05-20 10:25:54,135 | INFO     | errors: (none)
[2024-05-20 12:26:06] 2024-05-20 10:25:54,135 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-20 12:26:06] 2024-05-20 10:25:54,135 | INFO     | pilot state: finished 
[2024-05-20 12:26:06] 2024-05-20 10:25:54,136 | INFO     | transexitcode: 0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,136 | INFO     | exeerrorcode: 0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,136 | INFO     | exeerrordiag: 
[2024-05-20 12:26:06] 2024-05-20 10:25:54,136 | INFO     | exitcode: 0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,136 | INFO     | exitmsg: OK
[2024-05-20 12:26:06] 2024-05-20 10:25:54,136 | INFO     | cpuconsumptiontime: 70696 s
[2024-05-20 12:26:06] 2024-05-20 10:25:54,136 | INFO     | nevents: 400
[2024-05-20 12:26:06] 2024-05-20 10:25:54,136 | INFO     | neventsw: 0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,137 | INFO     | pid: 2627113
[2024-05-20 12:26:06] 2024-05-20 10:25:54,137 | INFO     | pgrp: 2627113
[2024-05-20 12:26:06] 2024-05-20 10:25:54,137 | INFO     | corecount: 12
[2024-05-20 12:26:06] 2024-05-20 10:25:54,137 | INFO     | event service: False
[2024-05-20 12:26:06] 2024-05-20 10:25:54,137 | INFO     | sizes: {0: 2392122, 1: 2392264, 5: 2392470, 11: 2392526, 6927: 2419760, 6928: 2419759, 6930: 2428905, 6931: 2428961, 6938: 2429131}
[2024-05-20 12:26:06] 2024-05-20 10:25:54,137 | INFO     | --------------------------------------------------
[2024-05-20 12:26:06] 2024-05-20 10:25:54,138 | INFO     | 
[2024-05-20 12:26:06] 2024-05-20 10:25:54,138 | INFO     | executing command: ls -lF /scratch/.boinc/slots/0
[2024-05-20 12:26:06] 2024-05-20 10:25:54,163 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,163 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,163 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,163 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,163 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,164 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,166 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-20 12:26:06] 2024-05-20 10:25:54,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,166 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-20 12:26:06] 2024-05-20 10:25:54,166 | INFO     | job 6208719170 has completed (purged errors)
[2024-05-20 12:26:06] 2024-05-20 10:25:54,166 | INFO     | overall cleanup function is called
[2024-05-20 12:26:06] 2024-05-20 10:25:55,175 | INFO     | --- collectZombieJob: --- 10, [2627113]
[2024-05-20 12:26:06] 2024-05-20 10:25:55,175 | INFO     | zombie collector waiting for pid 2627113
[2024-05-20 12:26:06] 2024-05-20 10:25:55,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-20 12:26:06] 2024-05-20 10:25:56,181 | INFO     | collected zombie processes
[2024-05-20 12:26:06] 2024-05-20 10:25:56,181 | INFO     | will now attempt to kill all subprocesses of pid=2627113
[2024-05-20 12:26:06] 2024-05-20 10:25:56,327 | INFO     | process IDs to be killed: [2627113] (in reverse order)
[2024-05-20 12:26:06] 2024-05-20 10:25:56,406 | WARNING  | found no corresponding commands to process id(s)
[2024-05-20 12:26:06] 2024-05-20 10:25:56,407 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-20 12:26:06] 2024-05-20 10:25:56,415 | INFO     | did not find any defunct processes belonging to 2627113
[2024-05-20 12:26:06] 2024-05-20 10:25:56,423 | INFO     | did not find any defunct processes belonging to 2627113
[2024-05-20 12:26:06] 2024-05-20 10:25:56,423 | INFO     | ready for new job
[2024-05-20 12:26:06] 2024-05-20 10:25:56,423 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-20 12:26:06] 2024-05-20 10:25:56,425 | INFO     | *************************************
[2024-05-20 12:26:06] 2024-05-20 10:25:56,425 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-20 12:26:06] 2024-05-20 10:25:56,425 | INFO     | *************************************
[2024-05-20 12:26:06] 2024-05-20 10:25:56,425 | INFO     | 
[2024-05-20 12:26:06] 2024-05-20 10:25:56,427 | INFO     | architecture information:
[2024-05-20 12:26:06] 2024-05-20 10:25:56,428 | INFO     | executing command: cat /etc/os-release
[2024-05-20 12:26:06] 2024-05-20 10:25:56,446 | INFO     | cat /etc/os-release:
[2024-05-20 12:26:06] NAME="CentOS Linux"
[2024-05-20 12:26:06] VERSION="7 (Core)"
[2024-05-20 12:26:06] ID="centos"
[2024-05-20 12:26:06] ID_LIKE="rhel fedora"
[2024-05-20 12:26:06] VERSION_ID="7"
[2024-05-20 12:26:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-20 12:26:06] ANSI_COLOR="0;31"
[2024-05-20 12:26:06] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-20 12:26:06] HOME_URL="https://www.centos.org/"
[2024-05-20 12:26:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-20 12:26:06] 
[2024-05-20 12:26:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-20 12:26:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-20 12:26:06] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-20 12:26:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-20 12:26:06] 
[2024-05-20 12:26:06] 2024-05-20 10:25:56,446 | INFO     | *************************************
[2024-05-20 12:26:06] 2024-05-20 10:25:56,949 | INFO     | executing command: df -mP /scratch/.boinc/slots/0
[2024-05-20 12:26:06] 2024-05-20 10:25:56,963 | INFO     | sufficient remaining disk space (709900632064 B)
[2024-05-20 12:26:06] 2024-05-20 10:25:56,963 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-20 12:26:06] 2024-05-20 10:25:56,963 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-20 12:26:06] 2024-05-20 10:25:56,964 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-20 12:26:06] 2024-05-20 10:25:56,964 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-20 12:26:06] 2024-05-20 10:25:56,964 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-20 12:26:06] 2024-05-20 10:25:56,964 | INFO     | aborting loop
[2024-05-20 12:26:06] 2024-05-20 10:25:56,965 | INFO     | found 0 job(s) in 20 queues
[2024-05-20 12:26:06] 2024-05-20 10:25:56,966 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-20 12:26:06] 2024-05-20 10:25:56,966 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-20 12:26:06] 2024-05-20 10:25:57,089 | INFO     | all data control threads have been joined
[2024-05-20 12:26:06] 2024-05-20 10:25:57,549 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-20 12:26:06] 2024-05-20 10:25:57,958 | INFO     | all payload control threads have been joined
[2024-05-20 12:26:06] 2024-05-20 10:25:57,964 | INFO     | all job control threads have been joined
[2024-05-20 12:26:06] 2024-05-20 10:25:57,969 | INFO     | [job] retrieve thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:57,970 | INFO     | [job] job monitor thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,057 | INFO     | [data] copytool_in thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,095 | INFO     | [data] control thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,118 | INFO     | [payload] failed_post thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,462 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,776 | INFO     | [job] validate thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,885 | INFO     | [payload] execute_payloads thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,945 | INFO     | [payload] validate_post thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,964 | INFO     | [payload] control thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,969 | INFO     | [job] control thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:58,970 | INFO     | [data] copytool_out thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:59,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-20 12:26:06] 2024-05-20 10:25:59,229 | INFO     | [job] create_data_payload thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:25:59,291 | INFO     | [payload] validate_pre thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:26:00,150 | INFO     | [job] queue monitor thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:26:01,555 | INFO     | [data] queue_monitor thread has finished
[2024-05-20 12:26:06] 2024-05-20 10:26:01,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104251602752)>', '<ExcThread(monitor, started 140103821281024)>']
[2024-05-20 12:26:06] 2024-05-20 10:26:01,991 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-20 12:26:06] 2024-05-20 10:26:01,991 | INFO     | [monitor] control thread has ended
[2024-05-20 12:26:06] 2024-05-20 10:26:06,638 | INFO     | all workflow threads have been joined
[2024-05-20 12:26:06] 2024-05-20 10:26:06,638 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-20 12:26:06] 2024-05-20 10:26:06,638 | INFO     | traces error code: 0
[2024-05-20 12:26:06] 2024-05-20 10:26:06,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-20 12:26:06] 2024-05-20 10:26:06,738 [wrapper] ==== pilot stdout END ====
[2024-05-20 12:26:06] 2024-05-20 10:26:06,742 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-20 12:26:06] 2024-05-20 10:26:06,745 [wrapper] pilotpid: 2619845
[2024-05-20 12:26:06] 2024-05-20 10:26:06,749 [wrapper] Pilot exit status: 0
[2024-05-20 12:26:06] 2024-05-20 10:26:06,762 [wrapper] pandaids: 6208719170
[2024-05-20 12:26:06] 2024-05-20 10:26:06,836 [wrapper] cleanup: SIGTERM to supervisor_pilot 2732060 2619846
[2024-05-20 12:26:06] 2024-05-20 10:26:06,840 [wrapper] Test setup, not cleaning
[2024-05-20 12:26:06] 2024-05-20 10:26:06,843 [wrapper] ==== wrapper stdout END ====
[2024-05-20 12:26:06] 2024-05-20 10:26:06,846 [wrapper] ==== wrapper stderr END ====
[2024-05-20 12:26:06] 2024-05-20 10:26:06,853 [wrapper] apfmon messages muted
[2024-05-20 12:26:06]  *** Error codes and diagnostics ***
[2024-05-20 12:26:06]     "exeErrorCode": 0,
[2024-05-20 12:26:06]     "exeErrorDiag": "",
[2024-05-20 12:26:06]     "pilotErrorCode": 0,
[2024-05-20 12:26:06]     "pilotErrorDiag": "",
[2024-05-20 12:26:06]  *** Listing of results directory ***
[2024-05-20 12:26:06] total 920984
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc    467845 May 18 13:34 pilot3.tar.gz
[2024-05-20 12:26:06] -rwx------ 1 boinc boinc     32251 May 18 13:37 runpilot2-wrapper.sh
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc      5633 May 18 13:37 queuedata.json
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc       100 May 20 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-20 12:26:06] -rwxr-xr-x 1 boinc boinc      7986 May 20 10:29 run_atlas
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc       105 May 20 10:29 job.xml
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc      6528 May 20 10:29 init_data.xml
[2024-05-20 12:26:06] -rw-r--r-- 2 boinc boinc 628777249 May 20 10:29 EVNT.38776160._000110.pool.root.1
[2024-05-20 12:26:06] -rw-r--r-- 2 boinc boinc     17537 May 20 10:29 start_atlas.sh
[2024-05-20 12:26:06] drwxrwx--x 2 boinc boinc      4096 May 20 10:29 shared
[2024-05-20 12:26:06] -rw-r--r-- 2 boinc boinc    479999 May 20 10:29 input.tar.gz
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc         0 May 20 10:29 boinc_lockfile
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc      2625 May 20 10:29 pandaJob.out
[2024-05-20 12:26:06] -rw------- 1 boinc boinc       424 May 20 10:29 setup.sh.local
[2024-05-20 12:26:06] -rw------- 1 boinc boinc   1013891 May 20 10:29 agis_schedconf.cvmfs.json
[2024-05-20 12:26:06] -rw------- 1 boinc boinc         0 May 20 10:29 agis_ddmendpoints.agis.ALL.json
[2024-05-20 12:26:06] -rw------- 1 boinc boinc   1324701 May 20 10:29 cric_ddmendpoints.json
[2024-05-20 12:26:06] drwx------ 4 boinc boinc      4096 May 20 10:29 pilot3
[2024-05-20 12:26:06] -rw------- 1 boinc boinc 308580456 May 20 12:25 HITS.38920982._003822.pool.root.1
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc       530 May 20 12:25 boinc_task_state.xml
[2024-05-20 12:26:06] -rw------- 1 boinc boinc        95 May 20 12:25 pilot_heartbeat.json
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc      8192 May 20 12:25 boinc_mmap_file
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc        27 May 20 12:25 wrapper_checkpoint.txt
[2024-05-20 12:26:06] -rw------- 1 boinc boinc      1035 May 20 12:25 memory_monitor_summary.json
[2024-05-20 12:26:06] -rw------- 1 boinc boinc    403503 May 20 12:25 log.38920982._003822.job.log.tgz.1
[2024-05-20 12:26:06] -rw------- 1 boinc boinc      7710 May 20 12:25 heartbeat.json
[2024-05-20 12:26:06] -rw------- 1 boinc boinc      4336 May 20 12:26 pilotlog.txt
[2024-05-20 12:26:06] -rw------- 1 boinc boinc    694708 May 20 12:26 log.38920982._003822.job.log.1
[2024-05-20 12:26:06] -rw------- 1 boinc boinc       357 May 20 12:26 output.list
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc       620 May 20 12:26 runtime_log
[2024-05-20 12:26:06] -rw------- 1 boinc boinc   1116160 May 20 12:26 result.tar.gz
[2024-05-20 12:26:06] -rw------- 1 boinc boinc       661 May 20 12:26 wq3NDmsYXS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmkxLKDmTEV4om.diag
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc     11064 May 20 12:26 runtime_log.err
[2024-05-20 12:26:06] -rw-r--r-- 1 boinc boinc     21585 May 20 12:26 stderr.txt
[2024-05-20 12:26:06] HITS file was successfully produced:
[2024-05-20 12:26:06] -rw------- 1 boinc boinc 308580456 May 20 12:25 shared/HITS.pool.root.1
[2024-05-20 12:26:06]  *** Contents of shared directory: ***
[2024-05-20 12:26:06] total 916988
[2024-05-20 12:26:06] -rw-r--r-- 2 boinc boinc 628777249 May 20 10:29 ATLAS.root_0
[2024-05-20 12:26:06] -rw-r--r-- 2 boinc boinc     17537 May 20 10:29 start_atlas.sh
[2024-05-20 12:26:06] -rw-r--r-- 2 boinc boinc    479999 May 20 10:29 input.tar.gz
[2024-05-20 12:26:06] -rw------- 1 boinc boinc 308580456 May 20 12:25 HITS.pool.root.1
[2024-05-20 12:26:06] -rw------- 1 boinc boinc   1116160 May 20 12:26 result.tar.gz
12:26:08 (2615445): run_atlas exited; CPU time 70133.375022
12:26:08 (2615445): called boinc_finish(0)

</stderr_txt>
]]>

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