Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
12:14:28 (260644): wrapper (7.7.26015): starting
12:14:28 (260644): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 12:14:28] Arguments: --nthreads 12
[2024-05-18 12:14:28] Threads: 12
[2024-05-18 12:14:28] Checking for CVMFS
[2024-05-18 12:14:29] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 12:14:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 12:14:29] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 12:14:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 12:14:29] 2.10.1.0 2798 174066 178716 132888 1 176 31883075 45568001 11696 130560 0 1099248206 99.772 640166247 17733 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 12:14:29] CVMFS is ok
[2024-05-18 12:14:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 12:14:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 12:14:29] Further information can be found at the LHC@home message board.
[2024-05-18 12:14:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 12:14:29] Checking for apptainer binary...
[2024-05-18 12:14:29] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 12:14:29] Running /usr/bin/apptainer --version
[2024-05-18 12:14:29] apptainer version 1.1.8-1.el7
[2024-05-18 12:14:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 12:14:30] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0093.triumf.lcg
[2024-05-18 12:14:30] apptainer works
[2024-05-18 12:14:30] Set ATHENA_PROC_NUMBER=12
[2024-05-18 12:14:30] Set ATHENA_CORE_NUMBER=12
[2024-05-18 12:14:30] Starting ATLAS job with PandaID=6208713873
[2024-05-18 12:14:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 13:18:05]  *** The last 200 lines of the pilot log: ***
[2024-05-18 13:18:05]  direct_access_lan=False
[2024-05-18 13:18:05]  direct_access_wan=False
[2024-05-18 13:18:05]  domain=
[2024-05-18 13:18:05]  filesize=353407
[2024-05-18 13:18:05]  filetype=log
[2024-05-18 13:18:05]  guid=a16e93bf-ed53-4c81-b761-35e4eb7b61b4
[2024-05-18 13:18:05]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 13:18:05]  is_tar=False
[2024-05-18 13:18:05]  lfn=log.38744235._001732.job.log.tgz.1
[2024-05-18 13:18:05]  mtime=0
[2024-05-18 13:18:05]  protocol_id=None
[2024-05-18 13:18:05]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 13:18:05]  replicas=None
[2024-05-18 13:18:05]  scope=mc23_13p6TeV
[2024-05-18 13:18:05]  status=None
[2024-05-18 13:18:05]  status_code=0
[2024-05-18 13:18:05]  storage_token=
[2024-05-18 13:18:05]  surl=/home/boinc/slots/0/PanDA_Pilot-6208713873/log.38744235._001732.job.log.tgz.1
[2024-05-18 13:18:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/9e/log.38744235._001732.job.log.tgz.1
[2024-05-18 13:18:05]  workdir=None
[2024-05-18 13:18:05] ]
[2024-05-18 13:18:05] 2024-05-18 20:17:40,856 | INFO     | transferring file log.38744235._001732.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208713873/log.38744235._001732.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 13:18:05] 2024-05-18 20:17:40,856 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208713873/log.38744235._001732.job.log.tgz.1 /home/boinc/slots/0/log.38744235._001732.job.log.t
[2024-05-18 13:18:05] 2024-05-18 20:17:40,880 | INFO     | adding to output.list: log.38744235._001732.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0a/9e/log.38744235._001732.job.log.tg
[2024-05-18 13:18:05] 2024-05-18 20:17:40,881 | INFO     | summary of transferred files:
[2024-05-18 13:18:05] 2024-05-18 20:17:40,881 | INFO     |  -- lfn=log.38744235._001732.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 13:18:05] 2024-05-18 20:17:40,881 | INFO     | stage-out finished correctly
[2024-05-18 13:18:05] 2024-05-18 20:17:44,246 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 13:18:05] 2024-05-18 20:17:44,335 | INFO     | job 6208713873 has state=finished
[2024-05-18 13:18:05] 2024-05-18 20:17:44,336 | INFO     | preparing for final server update for job 6208713873 in state='finished'
[2024-05-18 13:18:05] 2024-05-18 20:17:44,673 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2024-05-18 13:18:05] 2024-05-18 20:17:44,673 | INFO     | this job has now completed (state=finished)
[2024-05-18 13:18:05] 2024-05-18 20:17:44,674 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 13:18:05] 2024-05-18 20:17:44,674 | INFO     | job 6208713873 has finished - writing final server update
[2024-05-18 13:18:05] 2024-05-18 20:17:44,674 | INFO     | total number of processed events: 400 (read)
[2024-05-18 13:18:05] 2024-05-18 20:17:44,681 | INFO     | executing command: lscpu
[2024-05-18 13:18:05] 2024-05-18 20:17:44,745 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 13:18:05] 2024-05-18 20:17:44,745 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 13:18:05] 2024-05-18 20:17:44,801 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 13:18:05] 2024-05-18 20:17:51,145 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 13:18:05] 2024-05-18 20:17:51,145 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208713873/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 13:18:05] 2024-05-18 20:17:51,150 | INFO     | extracted standard info from prmon json
[2024-05-18 13:18:05] 2024-05-18 20:17:51,150 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 13:18:05] 2024-05-18 20:17:51,150 | WARNING  | GPU info not found in prmon json
[2024-05-18 13:18:05] 2024-05-18 20:17:51,151 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 13:18:05] 2024-05-18 20:17:51,151 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 13:18:05] 2024-05-18 20:17:51,153 | INFO     | fitting pss+swap vs Time
[2024-05-18 13:18:05] 2024-05-18 20:17:51,153 | INFO     | model: linear, x: [1716060010.0, 1716060071.0, 1716060132.0, 1716060193.0, 1716060254.0, 1716060315.0, 1716060376.0, 1716060437.0, 1716060498.0, 1716060559.0, 1716
[2024-05-18 13:18:05] 2024-05-18 20:17:51,153 | INFO     | sum of square deviations: 51575256.98181818
[2024-05-18 13:18:05] 2024-05-18 20:17:51,153 | INFO     | sum of deviations: 21575375720.818184
[2024-05-18 13:18:05] 2024-05-18 20:17:51,153 | INFO     | mean x: 1716061657.0181818
[2024-05-18 13:18:05] 2024-05-18 20:17:51,153 | INFO     | mean y: 2760911.1818181816
[2024-05-18 13:18:05] 2024-05-18 20:17:51,153 | INFO     | -- intersect: -717873933785.8395
[2024-05-18 13:18:05] 2024-05-18 20:17:51,153 | INFO     | intersect: -717873933785.8395
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | chi2: 1.9823300068431615
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | -- intersect: -717873933785.8395
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | current memory leak: 418.33 B/s (using 55 data points, chi2=1.98)
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | ..............................
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | . Timing measurements:
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | . get job = 0 s
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | . initial setup = 2 s
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | . payload setup = 4 s
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | . stage-in = 0 s
[2024-05-18 13:18:05] 2024-05-18 20:17:51,154 | INFO     | . payload execution = 3756 s
[2024-05-18 13:18:05] 2024-05-18 20:17:51,155 | INFO     | . stage-out = 0 s
[2024-05-18 13:18:05] 2024-05-18 20:17:51,155 | INFO     | . log creation = 0 s
[2024-05-18 13:18:05] 2024-05-18 20:17:51,155 | INFO     | ..............................
[2024-05-18 13:18:05] 2024-05-18 20:17:51,213 | INFO     | 
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | job summary report
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | --------------------------------------------------
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | PanDA job id: 6208713873
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | task id: 38744235
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | errors: (none)
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | pilot state: finished 
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | transexitcode: 0
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | exeerrorcode: 0
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | exeerrordiag: 
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | exitcode: 0
[2024-05-18 13:18:05] 2024-05-18 20:17:51,214 | INFO     | exitmsg: OK
[2024-05-18 13:18:05] 2024-05-18 20:17:51,215 | INFO     | cpuconsumptiontime: 33073 s
[2024-05-18 13:18:05] 2024-05-18 20:17:51,215 | INFO     | nevents: 400
[2024-05-18 13:18:05] 2024-05-18 20:17:51,215 | INFO     | neventsw: 0
[2024-05-18 13:18:05] 2024-05-18 20:17:51,215 | INFO     | pid: 271286
[2024-05-18 13:18:05] 2024-05-18 20:17:51,215 | INFO     | pgrp: 271286
[2024-05-18 13:18:05] 2024-05-18 20:17:51,215 | INFO     | corecount: 12
[2024-05-18 13:18:05] 2024-05-18 20:17:51,215 | INFO     | event service: False
[2024-05-18 13:18:05] 2024-05-18 20:17:51,215 | INFO     | sizes: {0: 2391887, 1: 2392086, 4: 2392292, 11: 2392320, 3764: 2418018, 3765: 2426972, 3768: 2427156, 3775: 2427326}
[2024-05-18 13:18:05] 2024-05-18 20:17:51,216 | INFO     | --------------------------------------------------
[2024-05-18 13:18:05] 2024-05-18 20:17:51,216 | INFO     | 
[2024-05-18 13:18:05] 2024-05-18 20:17:51,216 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 13:18:05] 2024-05-18 20:17:51,279 | WARNING  | process 271286 is no longer using CPU - aborting
[2024-05-18 13:18:05] 2024-05-18 20:17:51,279 | INFO     | aborting job monitoring since job object (job id=6208713873) has expired
[2024-05-18 13:18:05] 2024-05-18 20:17:51,299 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,300 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,300 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,300 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,301 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 13:18:05] 2024-05-18 20:17:51,302 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,302 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 13:18:05] 2024-05-18 20:17:51,302 | INFO     | job 6208713873 has completed (purged errors)
[2024-05-18 13:18:05] 2024-05-18 20:17:51,302 | INFO     | overall cleanup function is called
[2024-05-18 13:18:05] 2024-05-18 20:17:52,311 | INFO     | --- collectZombieJob: --- 10, [271286]
[2024-05-18 13:18:05] 2024-05-18 20:17:52,311 | INFO     | zombie collector waiting for pid 271286
[2024-05-18 13:18:05] 2024-05-18 20:17:52,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 13:18:05] 2024-05-18 20:17:53,314 | INFO     | collected zombie processes
[2024-05-18 13:18:05] 2024-05-18 20:17:53,314 | INFO     | will now attempt to kill all subprocesses of pid=271286
[2024-05-18 13:18:05] 2024-05-18 20:17:53,450 | INFO     | process IDs to be killed: [271286] (in reverse order)
[2024-05-18 13:18:05] 2024-05-18 20:17:53,562 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 13:18:05] 2024-05-18 20:17:53,562 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 13:18:05] 2024-05-18 20:17:53,568 | INFO     | did not find any defunct processes belonging to 271286
[2024-05-18 13:18:05] 2024-05-18 20:17:53,574 | INFO     | did not find any defunct processes belonging to 271286
[2024-05-18 13:18:05] 2024-05-18 20:17:53,574 | INFO     | ready for new job
[2024-05-18 13:18:05] 2024-05-18 20:17:53,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 13:18:05] 2024-05-18 20:17:53,576 | INFO     | *************************************
[2024-05-18 13:18:05] 2024-05-18 20:17:53,576 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 13:18:05] 2024-05-18 20:17:53,576 | INFO     | *************************************
[2024-05-18 13:18:05] 2024-05-18 20:17:53,576 | INFO     | 
[2024-05-18 13:18:05] 2024-05-18 20:17:53,578 | INFO     | architecture information:
[2024-05-18 13:18:05] 2024-05-18 20:17:53,579 | INFO     | executing command: cat /etc/os-release
[2024-05-18 13:18:05] 2024-05-18 20:17:53,598 | INFO     | cat /etc/os-release:
[2024-05-18 13:18:05] NAME="CentOS Linux"
[2024-05-18 13:18:05] VERSION="7 (Core)"
[2024-05-18 13:18:05] ID="centos"
[2024-05-18 13:18:05] ID_LIKE="rhel fedora"
[2024-05-18 13:18:05] VERSION_ID="7"
[2024-05-18 13:18:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 13:18:05] ANSI_COLOR="0;31"
[2024-05-18 13:18:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 13:18:05] HOME_URL="https://www.centos.org/"
[2024-05-18 13:18:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 13:18:05] 
[2024-05-18 13:18:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 13:18:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 13:18:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 13:18:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 13:18:05] 
[2024-05-18 13:18:05] 2024-05-18 20:17:53,598 | INFO     | *************************************
[2024-05-18 13:18:05] 2024-05-18 20:17:54,101 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 13:18:05] 2024-05-18 20:17:54,371 | INFO     | sufficient remaining disk space (2057860808704 B)
[2024-05-18 13:18:05] 2024-05-18 20:17:54,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 13:18:05] 2024-05-18 20:17:54,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 13:18:05] 2024-05-18 20:17:54,372 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 13:18:05] 2024-05-18 20:17:54,372 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 13:18:05] 2024-05-18 20:17:54,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 13:18:05] 2024-05-18 20:17:54,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 13:18:05] 2024-05-18 20:17:54,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 13:18:05] 2024-05-18 20:17:54,679 | INFO     | all payload control threads have been joined
[2024-05-18 13:18:05] 2024-05-18 20:17:54,712 | INFO     | all data control threads have been joined
[2024-05-18 13:18:05] 2024-05-18 20:17:54,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 13:18:05] 2024-05-18 20:17:54,788 | INFO     | aborting loop
[2024-05-18 13:18:05] 2024-05-18 20:17:54,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 13:18:05] 2024-05-18 20:17:55,377 | INFO     | [job] retrieve thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:55,437 | INFO     | [payload] validate_post thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:55,680 | INFO     | [payload] control thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:55,693 | INFO     | [data] copytool_in thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:55,718 | INFO     | [data] control thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:55,736 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:55,793 | INFO     | [job] job monitor thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:55,835 | INFO     | all job control threads have been joined
[2024-05-18 13:18:05] 2024-05-18 20:17:55,859 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:55,972 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:56,223 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 13:18:05] 2024-05-18 20:17:56,374 | INFO     | [data] copytool_out thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:56,420 | INFO     | [payload] failed_post thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:56,776 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:56,825 | INFO     | [job] validate thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:56,841 | INFO     | [job] control thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:57,228 | INFO     | [job] queue monitor thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:58,845 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 13:18:05] 2024-05-18 20:17:59,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511477745472)>', '<ExcThread(monitor, started 140510903650048)>']
[2024-05-18 13:18:05] 2024-05-18 20:17:59,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 13:18:05] 2024-05-18 20:17:59,398 | INFO     | [monitor] control thread has ended
[2024-05-18 13:18:05] 2024-05-18 20:18:04,176 | INFO     | all workflow threads have been joined
[2024-05-18 13:18:05] 2024-05-18 20:18:04,176 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 13:18:05] 2024-05-18 20:18:04,177 | INFO     | traces error code: 0
[2024-05-18 13:18:05] 2024-05-18 20:18:04,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 13:18:05] 2024-05-18 20:18:04,292 [wrapper] ==== pilot stdout END ====
[2024-05-18 13:18:05] 2024-05-18 20:18:04,296 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 13:18:05] 2024-05-18 20:18:04,303 [wrapper] pilotpid: 264796
[2024-05-18 13:18:05] 2024-05-18 20:18:04,306 [wrapper] Pilot exit status: 0
[2024-05-18 13:18:05] 2024-05-18 20:18:04,315 [wrapper] pandaids: 6208713873
[2024-05-18 13:18:05] 2024-05-18 20:18:04,390 [wrapper] cleanup: SIGTERM to supervisor_pilot  97467 264797
[2024-05-18 13:18:05] 2024-05-18 20:18:04,393 [wrapper] Test setup, not cleaning
[2024-05-18 13:18:05] 2024-05-18 20:18:04,395 [wrapper] ==== wrapper stdout END ====
[2024-05-18 13:18:05] 2024-05-18 20:18:04,398 [wrapper] ==== wrapper stderr END ====
[2024-05-18 13:18:05] 2024-05-18 20:18:04,404 [wrapper] apfmon messages muted
[2024-05-18 13:18:05]  *** Error codes and diagnostics ***
[2024-05-18 13:18:05]     "exeErrorCode": 0,
[2024-05-18 13:18:05]     "exeErrorDiag": "",
[2024-05-18 13:18:05]     "pilotErrorCode": 0,
[2024-05-18 13:18:05]     "pilotErrorDiag": "",
[2024-05-18 13:18:05]  *** Listing of results directory ***
[2024-05-18 13:18:05] total 851648
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc    467845 May 18 04:19 pilot3.tar.gz
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc      5633 May 18 04:22 queuedata.json
[2024-05-18 13:18:05] -rwx------ 1 boinc boinc     32251 May 18 04:24 runpilot2-wrapper.sh
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc       100 May 18 12:14 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 13:18:05] -rwxr-xr-x 1 boinc boinc      7986 May 18 12:14 run_atlas
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc       105 May 18 12:14 job.xml
[2024-05-18 13:18:05] -rw-r--r-- 2 boinc boinc 624771584 May 18 12:14 EVNT.38744233._000004.pool.root.1
[2024-05-18 13:18:05] -rw-r--r-- 2 boinc boinc     17537 May 18 12:14 start_atlas.sh
[2024-05-18 13:18:05] drwxrwx--x 2 boinc boinc      4096 May 18 12:14 shared
[2024-05-18 13:18:05] -rw-r--r-- 2 boinc boinc    479981 May 18 12:14 input.tar.gz
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc      6627 May 18 12:14 init_data.xml
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc         0 May 18 12:14 boinc_lockfile
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc      2536 May 18 12:14 pandaJob.out
[2024-05-18 13:18:05] -rw------- 1 boinc boinc       424 May 18 12:14 setup.sh.local
[2024-05-18 13:18:05] -rw------- 1 boinc boinc   1019083 May 18 12:14 agis_schedconf.cvmfs.json
[2024-05-18 13:18:05] -rw------- 1 boinc boinc         0 May 18 12:14 agis_ddmendpoints.agis.ALL.json
[2024-05-18 13:18:05] -rw------- 1 boinc boinc   1324701 May 18 12:14 cric_ddmendpoints.json
[2024-05-18 13:18:05] drwx------ 4 boinc boinc      4096 May 18 12:14 pilot3
[2024-05-18 13:18:05] -rw------- 1 boinc boinc 242307454 May 18 13:17 HITS.38744235._001732.pool.root.1
[2024-05-18 13:18:05] -rw------- 1 boinc boinc      1042 May 18 13:17 memory_monitor_summary.json
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc       530 May 18 13:17 boinc_task_state.xml
[2024-05-18 13:18:05] -rw------- 1 boinc boinc    353407 May 18 13:17 log.38744235._001732.job.log.tgz.1
[2024-05-18 13:18:05] -rw------- 1 boinc boinc      7751 May 18 13:17 heartbeat.json
[2024-05-18 13:18:05] -rw------- 1 boinc boinc        95 May 18 13:17 pilot_heartbeat.json
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc        27 May 18 13:17 wrapper_checkpoint.txt
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc      8192 May 18 13:17 boinc_mmap_file
[2024-05-18 13:18:05] -rw------- 1 boinc boinc      4333 May 18 13:18 pilotlog.txt
[2024-05-18 13:18:05] -rw------- 1 boinc boinc    380114 May 18 13:18 log.38744235._001732.job.log.1
[2024-05-18 13:18:05] -rw------- 1 boinc boinc       357 May 18 13:18 output.list
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc       620 May 18 13:18 runtime_log
[2024-05-18 13:18:05] -rw------- 1 boinc boinc    757760 May 18 13:18 result.tar.gz
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc     11286 May 18 13:18 runtime_log.err
[2024-05-18 13:18:05] -rw------- 1 boinc boinc       651 May 18 13:18 liUKDm9LXS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmoXSKDmK1C4dn.diag
[2024-05-18 13:18:05] -rw-r--r-- 1 boinc boinc     21404 May 18 13:18 stderr.txt
[2024-05-18 13:18:05] HITS file was successfully produced:
[2024-05-18 13:18:05] -rw------- 1 boinc boinc 242307454 May 18 13:17 shared/HITS.pool.root.1
[2024-05-18 13:18:05]  *** Contents of shared directory: ***
[2024-05-18 13:18:05] total 848004
[2024-05-18 13:18:05] -rw-r--r-- 2 boinc boinc 624771584 May 18 12:14 ATLAS.root_0
[2024-05-18 13:18:05] -rw-r--r-- 2 boinc boinc     17537 May 18 12:14 start_atlas.sh
[2024-05-18 13:18:05] -rw-r--r-- 2 boinc boinc    479981 May 18 12:14 input.tar.gz
[2024-05-18 13:18:05] -rw------- 1 boinc boinc 242307454 May 18 13:17 HITS.pool.root.1
[2024-05-18 13:18:05] -rw------- 1 boinc boinc    757760 May 18 13:18 result.tar.gz
13:18:07 (260644): run_atlas exited; CPU time 32970.090684
13:18:07 (260644): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN