Name wq9NDm6CWS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmjuLKDm8qssXo_0
Workunit 223089438
Created 18 May 2024, 10:11:27 UTC
Sent 18 May 2024, 14:00:55 UTC
Report deadline 26 May 2024, 14:00:55 UTC
Received 19 May 2024, 12:20:17 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 10803501
Run time 1 hours 30 min 50 sec
CPU time 3 hours 56 min 54 sec
Validate state Valid
Credit 986.84
Device peak FLOPS 23.97 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
x86_64-pc-linux-gnu
Peak working set size 3.52 GB
Peak swap size 4.89 GB
Peak disk usage 2.43 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2024-05-19 11:07:34 (14293): Detected: vboxwrapper 26206
2024-05-19 11:07:34 (14293): Detected: BOINC client v7.24.1
2024-05-19 11:07:34 (14293): Detected: VirtualBox VboxManage Interface (Version: 7.0.18)
2024-05-19 11:07:34 (14293): Successfully copied 'init_data.xml' to the shared directory.
2024-05-19 11:07:34 (14293): Create VM. (boinc_285bda6b978e7e0c, slot#1)
2024-05-19 11:07:34 (14293): Setting Memory Size for VM. (4300MB)
2024-05-19 11:07:34 (14293): Setting CPU Count for VM. (3)
2024-05-19 11:07:34 (14293): Setting Chipset Options for VM.
2024-05-19 11:07:34 (14293): Setting Graphics Controller Options for VM.
2024-05-19 11:07:35 (14293): Setting Boot Options for VM.
2024-05-19 11:07:35 (14293): Setting Network Configuration for NAT.
2024-05-19 11:07:35 (14293): Enabling VM Network Access.
2024-05-19 11:07:35 (14293): Disabling USB Support for VM.
2024-05-19 11:07:35 (14293): Disabling COM Port Support for VM.
2024-05-19 11:07:35 (14293): Disabling LPT Port Support for VM.
2024-05-19 11:07:35 (14293): Disabling Audio Support for VM.
2024-05-19 11:07:35 (14293): Disabling Clipboard Support for VM.
2024-05-19 11:07:35 (14293): Disabling Drag and Drop Support for VM.
2024-05-19 11:07:35 (14293): Adding storage controller(s) to VM.
2024-05-19 11:07:35 (14293): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2024-05-19 11:07:37 (14293): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2024-05-19 11:07:37 (14293): forwarding host port 57507 to guest port 80
2024-05-19 11:07:37 (14293): Enabling remote desktop for VM.
2024-05-19 11:07:37 (14293): Required extension pack not installed, remote desktop not enabled.
2024-05-19 11:07:37 (14293): Enabling shared directory for VM.
2024-05-19 11:07:37 (14293): Starting VM using VBoxManage interface. (boinc_285bda6b978e7e0c, slot#1)
2024-05-19 11:07:38 (14293): Successfully started VM. (PID = '14557')
2024-05-19 11:07:38 (14293): Reporting VM Process ID to BOINC.
2024-05-19 11:07:38 (14293): Guest Log: BIOS: VirtualBox 7.0.18
2024-05-19 11:07:38 (14293): Guest Log: CPUID EDX: 0x178bfbff
2024-05-19 11:07:38 (14293): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2024-05-19 11:07:38 (14293): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2024-05-19 11:07:38 (14293): VM state change detected. (old = 'poweredoff', new = 'running')
2024-05-19 11:07:38 (14293): Detected: Web Application Enabled (http://localhost:57507)
2024-05-19 11:07:38 (14293): Preference change detected
2024-05-19 11:07:38 (14293): Setting CPU throttle for VM. (100%)
2024-05-19 11:07:38 (14293): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2024-05-19 11:07:40 (14293): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2024-05-19 11:07:40 (14293): Guest Log: BIOS: Booting from Hard Disk...
2024-05-19 11:07:43 (14293): Guest Log: BIOS: KBD: unsupported int 16h function 03
2024-05-19 11:07:43 (14293): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2024-05-19 11:07:43 (14293): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2024-05-19 11:07:51 (14293): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2024-05-19 11:07:51 (14293): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2024-05-19 11:07:54 (14293): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2024-05-19 11:07:54 (14293): Guest Log: 00:00:00.000069 main     Log opened 2024-05-19T09:07:52.530416000Z
2024-05-19 11:07:54 (14293): Guest Log: 00:00:00.000129 main     OS Product: Linux
2024-05-19 11:07:54 (14293): Guest Log: 00:00:00.000141 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2024-05-19 11:07:54 (14293): Guest Log: 00:00:00.000151 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2024-05-19 11:07:54 (14293): Guest Log: 00:00:00.000162 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2024-05-19 11:07:54 (14293): Guest Log: 00:00:00.000162 main     Process ID: 1275
2024-05-19 11:07:54 (14293): Guest Log: 00:00:00.000162 main     Package type: LINUX_64BITS_GENERIC
2024-05-19 11:07:54 (14293): Guest Log: 00:00:00.005333 main     5.2.32 r132073 started. Verbose level = 0
2024-05-19 11:07:54 (14293): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2024-05-19 11:07:54 (14293): Guest Log: [INFO] Mounting shared directory
2024-05-19 11:07:54 (14293): Guest Log: [INFO] Checking for init_data.xml
2024-05-19 11:07:57 (14293): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2024-05-19 11:07:57 (14293): Guest Log: [INFO] Detected branch: prod
2024-05-19 11:07:57 (14293): Guest Log: This is the prod version of the ATLAS job wrapper
2024-05-19 11:07:57 (14293): Guest Log: Copying input files
2024-05-19 11:07:58 (14293): Guest Log: Copied input files into RunAtlas.
2024-05-19 11:07:58 (14293): Guest Log: This VM did not configure a local http proxy via BOINC.
2024-05-19 11:07:58 (14293): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2024-05-19 11:07:58 (14293): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2024-05-19 11:07:58 (14293): Guest Log: Further information can be found at the LHC@home message board.
2024-05-19 11:08:05 (14293): Guest Log: Running cvmfs_config stat atlas.cern.ch
2024-05-19 11:08:05 (14293): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2024-05-19 11:08:05 (14293): Guest Log: 2.6.3.0 1549 0 32220 132906 4 1 3116989 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2024-05-19 11:08:06 (14293): Guest Log: copied the webapp to /var/www
2024-05-19 11:08:06 (14293): Guest Log: ATHENA_PROC_NUMBER=3
2024-05-19 11:08:06 (14293): Guest Log: ATHENA_CORE_NUMBER=3
2024-05-19 11:08:06 (14293): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2024-05-19 11:08:06 (14293): Guest Log:  *** Starting ATLAS job. (PandaID=6208654846 taskID=38776104) ***
2024-05-19 12:37:57 (14293): VM state change detected. (old = 'running', new = 'paused')
2024-05-19 13:19:24 (14293): VM state change detected. (old = 'paused', new = 'running')
2024-05-19 13:19:30 (14293): Guest Log: 01:34:13.794913 timesync vgsvcTimeSyncWorker: Radical host time change: 2 495 870 000 000ns (HostNow=1 716 117 522 659 000 000 ns HostLast=1 716 115 026 789 000 000 ns)
2024-05-19 13:19:39 (14293): Guest Log: 01:34:23.797398 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 206 364 985 000ns (GuestNow=1 716 117 532 675 735 000 ns GuestLast=1 716 115 326 310 750 000 ns fSetTimeLastLoop=true )
2024-05-19 13:19:43 (14293): Guest Log:  *** Job finished ***
2024-05-19 13:19:43 (14293): Guest Log:  *** The last 20 lines of the pilot log: ***
2024-05-19 13:19:43 (14293): Guest Log: exception has been put in bucket queue belonging to thread 'monitor'
2024-05-19 13:19:43 (14293): Guest Log: setting graceful stop in 10 s since there is no point in continuing
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:44,606 | INFO     | [data] queue_monitor thread has finished
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:48,508 | INFO     | job.realtimelogging is not enabled
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:49,521 | INFO     | [payload] run_realtimelog thread has finished
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:50,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594730125120)>', '<ExcThread(monitor, started 140593766311680)>']
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,022 | INFO     | all workflow threads have been joined
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,022 | INFO     | end of generic workflow (traces error code: 0)
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,022 | INFO     | traces error code: 0
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,086 [wrapper] ==== pilot stdout END ====
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,102 [wrapper] ==== wrapper stdout RESUME ====
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,105 [wrapper] pilotpid: 6417
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,111 [wrapper] Pilot exit status: 0
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,204 [wrapper] pandaids: 6208654846
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,309 [wrapper] cleanup: SIGTERM to supervisor_pilot  3239 6418
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,314 [wrapper] Test setup, not cleaning
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,334 [wrapper] ==== wrapper stdout END ====
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,357 [wrapper] ==== wrapper stderr END ====
2024-05-19 13:19:43 (14293): Guest Log: 2024-05-19 11:18:56,385 [wrapper] apfmon messages muted
2024-05-19 13:19:43 (14293): Guest Log:  *** Error codes and diagnostics ***
2024-05-19 13:19:43 (14293): Guest Log:     "exeErrorCode": 0,
2024-05-19 13:19:43 (14293): Guest Log:     "exeErrorDiag": "",
2024-05-19 13:19:43 (14293): Guest Log:     "pilotErrorCode": 0,
2024-05-19 13:19:43 (14293): Guest Log:     "pilotErrorDiag": "",
2024-05-19 13:19:43 (14293): Guest Log:  *** Listing of results directory ***
2024-05-19 13:19:43 (14293): Guest Log: total 233304
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 atlas atlas      5633 May 18 10:10 queuedata.json
2024-05-19 13:19:43 (14293): Guest Log: -rwx------. 1 atlas atlas     32251 May 18 10:11 runpilot2-wrapper.sh
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas    468593 May 18 10:11 pilot3.tar.gz
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 atlas atlas     17537 May 19 09:07 start_atlas.sh
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 atlas atlas    481393 May 19 09:07 input.tar.gz
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 atlas atlas      7115 May 19 09:07 init_data.xml
2024-05-19 13:19:43 (14293): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 May 19 09:07 EVNT.38776100._000549.pool.root.1 -> /data/./ATLAS.root_0
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 atlas atlas      2643 May 19 09:08 pandaJob.out
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas       424 May 19 09:08 setup.sh.local
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas   1014045 May 19 09:08 agis_schedconf.cvmfs.json
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas         0 May 19 09:08 agis_ddmendpoints.agis.ALL.json
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas   1324701 May 19 09:08 cric_ddmendpoints.json
2024-05-19 13:19:43 (14293): Guest Log: drwx------. 6 atlas atlas      4096 May 19 09:08 pilot3
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas 234031847 May 19 10:41 HITS.38776104._016925.pool.root.1
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas        95 May 19 10:41 pilot_heartbeat.json
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas      1036 May 19 10:41 memory_monitor_summary.json
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas    217939 May 19 10:41 log.38776104._016925.job.log.tgz.1
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas      7670 May 19 10:41 heartbeat.json
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas      4181 May 19 11:18 pilotlog.txt
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas    489176 May 19 11:18 log.38776104._016925.job.log.1
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas       357 May 19 11:18 output.list
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 atlas atlas       620 May 19 11:18 runtime_log
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas    727040 May 19 11:18 result.tar.gz
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas       648 May 19 11:18 wq9NDm6CWS5n9Rq4apoT9bVoABFKDmABFKDmlqFKDmjuLKDm8qssXo.diag
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 atlas atlas     10948 May 19 11:18 runtime_log.err
2024-05-19 13:19:43 (14293): Guest Log: Looking for outputfile HITS.38776104._016925.pool.root.1
2024-05-19 13:19:43 (14293): Guest Log: HITS file was successfully produced
2024-05-19 13:19:43 (14293): Guest Log: -rw-------. 1 atlas atlas 234031847 May 19 10:41 /home/atlas/RunAtlas/HITS.38776104._016925.pool.root.1
2024-05-19 13:19:43 (14293): Guest Log: Successfully finished the ATLAS job!
2024-05-19 13:19:43 (14293): Guest Log: Copying the results back to the shared directory!
2024-05-19 13:19:43 (14293): Guest Log:  *** Contents of shared directory: ***
2024-05-19 13:19:43 (14293): Guest Log: total 583808
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 root root 596577737 May 19 09:07 ATLAS.root_0
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 root root      7115 May 19 09:07 init_data.xml
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 root root    481393 May 19 09:07 input.tar.gz
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 root root    727040 May 19  2024 result.tar.gz
2024-05-19 13:19:43 (14293): Guest Log: -rw-r--r--. 1 root root     17537 May 19 09:07 start_atlas.sh
2024-05-19 13:19:43 (14293): Guest Log:  *** Success! Shutting down the machine. ***
2024-05-19 13:19:43 (14293): VM Completion File Detected.
2024-05-19 13:19:43 (14293): Powering off VM.
2024-05-19 13:19:44 (14293): Successfully stopped VM.
2024-05-19 13:19:44 (14293): Deregistering VM. (boinc_285bda6b978e7e0c, slot#1)
2024-05-19 13:19:44 (14293): Removing network bandwidth throttle group from VM.
2024-05-19 13:19:44 (14293): Removing VM from VirtualBox.
13:19:49 (14293): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN