Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
16:07:10 (273726): wrapper (7.7.26015): starting
16:07:10 (273726): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 16:07:10] Arguments: --nthreads 12
[2024-05-18 16:07:10] Threads: 12
[2024-05-18 16:07:10] Checking for CVMFS
[2024-05-18 16:07:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 16:07:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 16:07:10] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 16:07:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 16:07:10] 2.10.1.0 2805 174299 183080 132893 1 452 45283259 45568001 7563 130560 0 1111170984 99.771 654355224 18511 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2024-05-18 16:07:10] CVMFS is ok
[2024-05-18 16:07:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 16:07:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 16:07:10] Further information can be found at the LHC@home message board.
[2024-05-18 16:07:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 16:07:10] Checking for apptainer binary...
[2024-05-18 16:07:10] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 16:07:10] Running /usr/bin/apptainer --version
[2024-05-18 16:07:11] apptainer version 1.1.8-1.el7
[2024-05-18 16:07:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 16:07:12] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0087.triumf.lcg
[2024-05-18 16:07:12] apptainer works
[2024-05-18 16:07:12] Set ATHENA_PROC_NUMBER=12
[2024-05-18 16:07:12] Set ATHENA_CORE_NUMBER=12
[2024-05-18 16:07:12] Starting ATLAS job with PandaID=6208654500
[2024-05-18 16:07:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 17:22:26]  *** The last 200 lines of the pilot log: ***
[2024-05-18 17:22:26]  guid=bfffd2be-8697-40cb-aa19-32646b6cb746
[2024-05-18 17:22:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 17:22:26]  is_tar=False
[2024-05-18 17:22:26]  lfn=log.38776146._016299.job.log.tgz.1
[2024-05-18 17:22:26]  mtime=0
[2024-05-18 17:22:26]  protocol_id=None
[2024-05-18 17:22:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 17:22:26]  replicas=None
[2024-05-18 17:22:26]  scope=mc23_13p6TeV
[2024-05-18 17:22:26]  status=None
[2024-05-18 17:22:26]  status_code=0
[2024-05-18 17:22:26]  storage_token=
[2024-05-18 17:22:26]  surl=/home/boinc/slots/0/PanDA_Pilot-6208654500/log.38776146._016299.job.log.tgz.1
[2024-05-18 17:22:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/98/log.38776146._016299.job.log.tgz.1
[2024-05-18 17:22:26]  workdir=None
[2024-05-18 17:22:26] ]
[2024-05-18 17:22:26] 2024-05-19 00:21:57,060 | INFO     | transferring file log.38776146._016299.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208654500/log.38776146._016299.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 17:22:26] 2024-05-19 00:21:57,060 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208654500/log.38776146._016299.job.log.tgz.1 /home/boinc/slots/0/log.38776146._016299.job.log.t
[2024-05-18 17:22:26] 2024-05-19 00:21:57,090 | INFO     | adding to output.list: log.38776146._016299.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/94/98/log.38776146._016299.job.log.tg
[2024-05-18 17:22:26] 2024-05-19 00:21:57,090 | INFO     | summary of transferred files:
[2024-05-18 17:22:26] 2024-05-19 00:21:57,090 | INFO     |  -- lfn=log.38776146._016299.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 17:22:26] 2024-05-19 00:21:57,090 | INFO     | stage-out finished correctly
[2024-05-18 17:22:26] 2024-05-19 00:21:57,807 | WARNING  | process 8226 is no longer using CPU - aborting
[2024-05-18 17:22:26] 2024-05-19 00:21:57,808 | INFO     | will not send any job update
[2024-05-18 17:22:26] 2024-05-19 00:21:58,533 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 17:22:26] 2024-05-19 00:22:00,312 | INFO     | monitor loop #347: job 0:6208654500 is in state 'finished'
[2024-05-18 17:22:26] 2024-05-19 00:22:00,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 17:22:26] 2024-05-19 00:22:01,170 | INFO     | job 6208654500 has state=finished
[2024-05-18 17:22:26] 2024-05-19 00:22:01,170 | INFO     | preparing for final server update for job 6208654500 in state='finished'
[2024-05-18 17:22:26] 2024-05-19 00:22:01,171 | INFO     | this job has now completed (state=finished)
[2024-05-18 17:22:26] 2024-05-19 00:22:01,171 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 17:22:26] 2024-05-19 00:22:01,171 | INFO     | job 6208654500 has finished - writing final server update
[2024-05-18 17:22:26] 2024-05-19 00:22:01,171 | INFO     | total number of processed events: 400 (read)
[2024-05-18 17:22:26] 2024-05-19 00:22:01,176 | INFO     | executing command: lscpu
[2024-05-18 17:22:26] 2024-05-19 00:22:01,220 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 17:22:26] 2024-05-19 00:22:01,221 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 17:22:26] 2024-05-19 00:22:01,275 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 17:22:26] 2024-05-19 00:22:02,815 | INFO     | monitor loop #348: job 0:6208654500 is in state 'finished'
[2024-05-18 17:22:26] 2024-05-19 00:22:02,815 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 17:22:26] 2024-05-19 00:22:04,639 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 17:22:26] 2024-05-19 00:22:04,639 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208654500/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 17:22:26] 2024-05-19 00:22:04,641 | INFO     | extracted standard info from prmon json
[2024-05-18 17:22:26] 2024-05-19 00:22:04,641 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 17:22:26] 2024-05-19 00:22:04,641 | WARNING  | GPU info not found in prmon json
[2024-05-18 17:22:26] 2024-05-19 00:22:04,641 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 17:22:26] 2024-05-19 00:22:04,642 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 17:22:26] 2024-05-19 00:22:04,644 | INFO     | fitting pss+swap vs Time
[2024-05-18 17:22:26] 2024-05-19 00:22:04,644 | INFO     | model: linear, x: [1716073970.0, 1716074031.0, 1716074092.0, 1716074153.0, 1716074214.0, 1716074275.0, 1716074336.0, 1716074397.0, 1716074458.0, 1716074519.0, 1716
[2024-05-18 17:22:26] 2024-05-19 00:22:04,644 | INFO     | sum of square deviations: 89127252.5
[2024-05-18 17:22:26] 2024-05-19 00:22:04,644 | INFO     | sum of deviations: 25769884503.000004
[2024-05-18 17:22:26] 2024-05-19 00:22:04,645 | INFO     | mean x: 1716075952.5
[2024-05-18 17:22:26] 2024-05-19 00:22:04,645 | INFO     | mean y: 2582326.6363636362
[2024-05-18 17:22:26] 2024-05-19 00:22:04,645 | INFO     | -- intersect: -496176508286.5374
[2024-05-18 17:22:26] 2024-05-19 00:22:04,645 | INFO     | intersect: -496176508286.5374
[2024-05-18 17:22:26] 2024-05-19 00:22:04,645 | INFO     | chi2: 2.343825321455137
[2024-05-18 17:22:26] 2024-05-19 00:22:04,645 | INFO     | -- intersect: -496176508286.5374
[2024-05-18 17:22:26] 2024-05-19 00:22:04,645 | INFO     | current memory leak: 289.14 B/s (using 66 data points, chi2=2.34)
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | ..............................
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | . Timing measurements:
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | . get job = 0 s
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | . initial setup = 2 s
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | . payload setup = 5 s
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | . stage-in = 0 s
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | . payload execution = 4451 s
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | . stage-out = 0 s
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | . log creation = 0 s
[2024-05-18 17:22:26] 2024-05-19 00:22:04,646 | INFO     | ..............................
[2024-05-18 17:22:26] 2024-05-19 00:22:04,726 | INFO     | 
[2024-05-18 17:22:26] 2024-05-19 00:22:04,726 | INFO     | job summary report
[2024-05-18 17:22:26] 2024-05-19 00:22:04,726 | INFO     | --------------------------------------------------
[2024-05-18 17:22:26] 2024-05-19 00:22:04,726 | INFO     | PanDA job id: 6208654500
[2024-05-18 17:22:26] 2024-05-19 00:22:04,727 | INFO     | task id: 38776146
[2024-05-18 17:22:26] 2024-05-19 00:22:04,727 | INFO     | errors: (none)
[2024-05-18 17:22:26] 2024-05-19 00:22:04,727 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 17:22:26] 2024-05-19 00:22:04,727 | INFO     | pilot state: finished 
[2024-05-18 17:22:26] 2024-05-19 00:22:04,727 | INFO     | transexitcode: 0
[2024-05-18 17:22:26] 2024-05-19 00:22:04,727 | INFO     | exeerrorcode: 0
[2024-05-18 17:22:26] 2024-05-19 00:22:04,727 | INFO     | exeerrordiag: 
[2024-05-18 17:22:26] 2024-05-19 00:22:04,727 | INFO     | exitcode: 0
[2024-05-18 17:22:26] 2024-05-19 00:22:04,727 | INFO     | exitmsg: OK
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | cpuconsumptiontime: 40901 s
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | nevents: 400
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | neventsw: 0
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | pid: 8226
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | pgrp: 8226
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | corecount: 12
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | event service: False
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | sizes: {0: 2392172, 4: 2392378, 11: 2392406, 4459: 2418474, 4460: 2427428, 4462: 2427484, 4468: 2427782}
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | --------------------------------------------------
[2024-05-18 17:22:26] 2024-05-19 00:22:04,728 | INFO     | 
[2024-05-18 17:22:26] 2024-05-19 00:22:04,729 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 17:22:26] 2024-05-19 00:22:04,759 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,760 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,760 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,760 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,762 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,762 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 17:22:26] 2024-05-19 00:22:04,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,762 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 17:22:26] 2024-05-19 00:22:04,762 | INFO     | job 6208654500 has completed (purged errors)
[2024-05-18 17:22:26] 2024-05-19 00:22:04,762 | INFO     | overall cleanup function is called
[2024-05-18 17:22:26] 2024-05-19 00:22:05,771 | INFO     | --- collectZombieJob: --- 10, [8226]
[2024-05-18 17:22:26] 2024-05-19 00:22:05,771 | INFO     | zombie collector waiting for pid 8226
[2024-05-18 17:22:26] 2024-05-19 00:22:05,771 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 17:22:26] 2024-05-19 00:22:06,777 | INFO     | collected zombie processes
[2024-05-18 17:22:26] 2024-05-19 00:22:06,777 | INFO     | will now attempt to kill all subprocesses of pid=8226
[2024-05-18 17:22:26] 2024-05-19 00:22:06,923 | INFO     | process IDs to be killed: [8226] (in reverse order)
[2024-05-18 17:22:26] 2024-05-19 00:22:07,041 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 17:22:26] 2024-05-19 00:22:07,042 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 17:22:26] 2024-05-19 00:22:07,049 | INFO     | did not find any defunct processes belonging to 8226
[2024-05-18 17:22:26] 2024-05-19 00:22:07,056 | INFO     | did not find any defunct processes belonging to 8226
[2024-05-18 17:22:26] 2024-05-19 00:22:07,056 | INFO     | ready for new job
[2024-05-18 17:22:26] 2024-05-19 00:22:07,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 17:22:26] 2024-05-19 00:22:07,058 | INFO     | *************************************
[2024-05-18 17:22:26] 2024-05-19 00:22:07,058 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 17:22:26] 2024-05-19 00:22:07,058 | INFO     | *************************************
[2024-05-18 17:22:26] 2024-05-19 00:22:07,058 | INFO     | 
[2024-05-18 17:22:26] 2024-05-19 00:22:07,061 | INFO     | architecture information:
[2024-05-18 17:22:26] 2024-05-19 00:22:07,062 | INFO     | executing command: cat /etc/os-release
[2024-05-18 17:22:26] 2024-05-19 00:22:07,084 | INFO     | cat /etc/os-release:
[2024-05-18 17:22:26] NAME="CentOS Linux"
[2024-05-18 17:22:26] VERSION="7 (Core)"
[2024-05-18 17:22:26] ID="centos"
[2024-05-18 17:22:26] ID_LIKE="rhel fedora"
[2024-05-18 17:22:26] VERSION_ID="7"
[2024-05-18 17:22:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 17:22:26] ANSI_COLOR="0;31"
[2024-05-18 17:22:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 17:22:26] HOME_URL="https://www.centos.org/"
[2024-05-18 17:22:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 17:22:26] 
[2024-05-18 17:22:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 17:22:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 17:22:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 17:22:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 17:22:26] 
[2024-05-18 17:22:26] 2024-05-19 00:22:07,084 | INFO     | *************************************
[2024-05-18 17:22:26] 2024-05-19 00:22:07,588 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 17:22:26] 2024-05-19 00:22:07,615 | INFO     | sufficient remaining disk space (2098528780288 B)
[2024-05-18 17:22:26] 2024-05-19 00:22:07,615 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 17:22:26] 2024-05-19 00:22:07,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 17:22:26] 2024-05-19 00:22:07,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 17:22:26] 2024-05-19 00:22:07,824 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-05-18 17:22:26] 2024-05-19 00:22:07,824 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-05-18 17:22:26] 2024-05-19 00:22:07,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 17:22:26] 2024-05-19 00:22:07,824 | INFO     | will abort loop
[2024-05-18 17:22:26] 2024-05-19 00:22:07,852 | INFO     | all job control threads have been joined
[2024-05-18 17:22:26] 2024-05-19 00:22:07,856 | INFO     | all payload control threads have been joined
[2024-05-18 17:22:26] 2024-05-19 00:22:08,127 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 17:22:26] 2024-05-19 00:22:08,127 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 17:22:26] 2024-05-19 00:22:08,127 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 17:22:26] 2024-05-19 00:22:08,371 | INFO     | all data control threads have been joined
[2024-05-18 17:22:26] 2024-05-19 00:22:08,621 | INFO     | [job] retrieve thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:08,703 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:08,726 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:08,827 | INFO     | [job] job monitor thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:08,855 | INFO     | [job] control thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:08,859 | INFO     | [payload] control thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:08,956 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:09,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 17:22:26] 2024-05-19 00:22:09,207 | INFO     | [job] validate thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:09,376 | INFO     | [data] control thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:09,662 | INFO     | [data] copytool_out thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:09,720 | INFO     | [data] copytool_in thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:09,737 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 17:22:26] 2024-05-19 00:22:09,790 | INFO     | [payload] failed_post thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:10,011 | INFO     | [payload] validate_post thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:10,743 | INFO     | [job] queue monitor thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:13,135 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:18,614 | INFO     | job.realtimelogging is not enabled
[2024-05-18 17:22:26] 2024-05-19 00:22:19,620 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 17:22:26] 2024-05-19 00:22:19,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140111909959488)>', '<ExcThread(monitor, started 140111362651904)>']
[2024-05-18 17:22:26] 2024-05-19 00:22:20,183 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 17:22:26] 2024-05-19 00:22:20,183 | INFO     | [monitor] control thread has ended
[2024-05-18 17:22:26] 2024-05-19 00:22:24,880 | INFO     | all workflow threads have been joined
[2024-05-18 17:22:26] 2024-05-19 00:22:24,880 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 17:22:26] 2024-05-19 00:22:24,881 | INFO     | traces error code: 0
[2024-05-18 17:22:26] 2024-05-19 00:22:24,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 17:22:26] 2024-05-19 00:22:24,980 [wrapper] ==== pilot stdout END ====
[2024-05-18 17:22:26] 2024-05-19 00:22:24,985 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 17:22:26] 2024-05-19 00:22:24,988 [wrapper] pilotpid: 1298
[2024-05-18 17:22:26] 2024-05-19 00:22:24,992 [wrapper] Pilot exit status: 0
[2024-05-18 17:22:26] 2024-05-19 00:22:25,003 [wrapper] pandaids: 6208654500
[2024-05-18 17:22:26] 2024-05-19 00:22:25,078 [wrapper] cleanup: SIGTERM to supervisor_pilot 119992 1299
[2024-05-18 17:22:26] 2024-05-19 00:22:25,082 [wrapper] Test setup, not cleaning
[2024-05-18 17:22:26] 2024-05-19 00:22:25,085 [wrapper] ==== wrapper stdout END ====
[2024-05-18 17:22:26] 2024-05-19 00:22:25,089 [wrapper] ==== wrapper stderr END ====
[2024-05-18 17:22:26] 2024-05-19 00:22:25,095 [wrapper] apfmon messages muted
[2024-05-18 17:22:26]  *** Error codes and diagnostics ***
[2024-05-18 17:22:26]     "exeErrorCode": 0,
[2024-05-18 17:22:26]     "exeErrorDiag": "",
[2024-05-18 17:22:26]     "pilotErrorCode": 0,
[2024-05-18 17:22:26]     "pilotErrorDiag": "",
[2024-05-18 17:22:26]  *** Listing of results directory ***
[2024-05-18 17:22:26] total 869540
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc    467845 May 18 02:37 pilot3.tar.gz
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc      5633 May 18 02:48 queuedata.json
[2024-05-18 17:22:26] -rwx------ 1 boinc boinc     32251 May 18 02:48 runpilot2-wrapper.sh
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc       100 May 18 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 17:22:26] -rwxr-xr-x 1 boinc boinc      7986 May 18 16:07 run_atlas
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc       105 May 18 16:07 job.xml
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc      6626 May 18 16:07 init_data.xml
[2024-05-18 17:22:26] -rw-r--r-- 2 boinc boinc 613449133 May 18 16:07 EVNT.38776140._000319.pool.root.1
[2024-05-18 17:22:26] -rw-r--r-- 2 boinc boinc     17537 May 18 16:07 start_atlas.sh
[2024-05-18 17:22:26] drwxrwx--x 2 boinc boinc      4096 May 18 16:07 shared
[2024-05-18 17:22:26] -rw-r--r-- 2 boinc boinc    480005 May 18 16:07 input.tar.gz
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc         0 May 18 16:07 boinc_lockfile
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc      2614 May 18 16:07 pandaJob.out
[2024-05-18 17:22:26] -rw------- 1 boinc boinc       424 May 18 16:07 setup.sh.local
[2024-05-18 17:22:26] -rw------- 1 boinc boinc   1013712 May 18 16:07 agis_schedconf.cvmfs.json
[2024-05-18 17:22:26] -rw------- 1 boinc boinc         0 May 18 16:07 agis_ddmendpoints.agis.ALL.json
[2024-05-18 17:22:26] -rw------- 1 boinc boinc   1324701 May 18 16:07 cric_ddmendpoints.json
[2024-05-18 17:22:26] drwx------ 4 boinc boinc      4096 May 18 16:07 pilot3
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc       530 May 18 17:21 boinc_task_state.xml
[2024-05-18 17:22:26] -rw------- 1 boinc boinc 271813541 May 18 17:21 HITS.38776146._016299.pool.root.1
[2024-05-18 17:22:26] -rw------- 1 boinc boinc        95 May 18 17:21 pilot_heartbeat.json
[2024-05-18 17:22:26] -rw------- 1 boinc boinc      1052 May 18 17:21 memory_monitor_summary.json
[2024-05-18 17:22:26] -rw------- 1 boinc boinc    364742 May 18 17:21 log.38776146._016299.job.log.tgz.1
[2024-05-18 17:22:26] -rw------- 1 boinc boinc      7764 May 18 17:22 heartbeat.json
[2024-05-18 17:22:26] -rw------- 1 boinc boinc      4468 May 18 17:22 pilotlog.txt
[2024-05-18 17:22:26] -rw------- 1 boinc boinc    441070 May 18 17:22 log.38776146._016299.job.log.1
[2024-05-18 17:22:26] -rw------- 1 boinc boinc       357 May 18 17:22 output.list
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc       620 May 18 17:22 runtime_log
[2024-05-18 17:22:26] -rw------- 1 boinc boinc    829440 May 18 17:22 result.tar.gz
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc     11286 May 18 17:22 runtime_log.err
[2024-05-18 17:22:26] -rw------- 1 boinc boinc       654 May 18 17:22 nEnNDmErVS5n7Olcko1bjSoqABFKDmABFKDmOtvXDmQAaKDmkMriZn.diag
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc        27 May 18 17:22 wrapper_checkpoint.txt
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc      8192 May 18 17:22 boinc_mmap_file
[2024-05-18 17:22:26] -rw-r--r-- 1 boinc boinc     21683 May 18 17:22 stderr.txt
[2024-05-18 17:22:26] HITS file was successfully produced:
[2024-05-18 17:22:26] -rw------- 1 boinc boinc 271813541 May 18 17:21 shared/HITS.pool.root.1
[2024-05-18 17:22:26]  *** Contents of shared directory: ***
[2024-05-18 17:22:26] total 865828
[2024-05-18 17:22:26] -rw-r--r-- 2 boinc boinc 613449133 May 18 16:07 ATLAS.root_0
[2024-05-18 17:22:26] -rw-r--r-- 2 boinc boinc     17537 May 18 16:07 start_atlas.sh
[2024-05-18 17:22:26] -rw-r--r-- 2 boinc boinc    480005 May 18 16:07 input.tar.gz
[2024-05-18 17:22:26] -rw------- 1 boinc boinc 271813541 May 18 17:21 HITS.pool.root.1
[2024-05-18 17:22:26] -rw------- 1 boinc boinc    829440 May 18 17:22 result.tar.gz
17:22:28 (273726): run_atlas exited; CPU time 40745.381993
17:22:28 (273726): called boinc_finish(0)

</stderr_txt>
]]>

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