Stderr output

<core_client_version>7.16.11</core_client_version>
<![CDATA[
<stderr_txt>
10:29:07 (93491): wrapper (7.7.26015): starting
10:29:07 (93491): wrapper: running run_atlas (--nthreads 12)
[2024-05-18 10:29:07] Arguments: --nthreads 12
[2024-05-18 10:29:07] Threads: 12
[2024-05-18 10:29:07] Checking for CVMFS
[2024-05-18 10:29:08] Probing /cvmfs/atlas.cern.ch... OK
[2024-05-18 10:29:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-05-18 10:29:08] Running cvmfs_config stat atlas.cern.ch
[2024-05-18 10:29:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-05-18 10:29:08] 2.10.1.0 2741 173961 160548 132886 3 72 25180697 45568001 7432 130560 0 1161681019 99.773 692010448 16121 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2024-05-18 10:29:08] CVMFS is ok
[2024-05-18 10:29:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-05-18 10:29:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-05-18 10:29:08] Further information can be found at the LHC@home message board.
[2024-05-18 10:29:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-05-18 10:29:08] Checking for apptainer binary...
[2024-05-18 10:29:08] Using apptainer found in PATH at /usr/bin/apptainer
[2024-05-18 10:29:08] Running /usr/bin/apptainer --version
[2024-05-18 10:29:08] apptainer version 1.1.8-1.el7
[2024-05-18 10:29:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-05-18 10:29:09] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0079.triumf.lcg
[2024-05-18 10:29:09] apptainer works
[2024-05-18 10:29:09] Set ATHENA_PROC_NUMBER=12
[2024-05-18 10:29:09] Set ATHENA_CORE_NUMBER=12
[2024-05-18 10:29:09] Starting ATLAS job with PandaID=6208653884
[2024-05-18 10:29:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-05-18 11:26:59]  *** The last 200 lines of the pilot log: ***
[2024-05-18 11:26:59]  filetype=log
[2024-05-18 11:26:59]  guid=16ca39fb-6436-4888-8976-9aea80bfcac5
[2024-05-18 11:26:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-05-18 11:26:59]  is_tar=False
[2024-05-18 11:26:59]  lfn=log.38776125._016311.job.log.tgz.1
[2024-05-18 11:26:59]  mtime=0
[2024-05-18 11:26:59]  protocol_id=None
[2024-05-18 11:26:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-05-18 11:26:59]  replicas=None
[2024-05-18 11:26:59]  scope=mc23_13p6TeV
[2024-05-18 11:26:59]  status=None
[2024-05-18 11:26:59]  status_code=0
[2024-05-18 11:26:59]  storage_token=
[2024-05-18 11:26:59]  surl=/home/boinc/slots/0/PanDA_Pilot-6208653884/log.38776125._016311.job.log.tgz.1
[2024-05-18 11:26:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/f5/log.38776125._016311.job.log.tgz.1
[2024-05-18 11:26:59]  workdir=None
[2024-05-18 11:26:59] ]
[2024-05-18 11:26:59] 2024-05-18 18:26:31,639 | INFO     | transferring file log.38776125._016311.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6208653884/log.38776125._016311.job.log.tgz.1 to /home/boinc/slots/0/log.
[2024-05-18 11:26:59] 2024-05-18 18:26:31,639 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6208653884/log.38776125._016311.job.log.tgz.1 /home/boinc/slots/0/log.38776125._016311.job.log.t
[2024-05-18 11:26:59] 2024-05-18 18:26:31,659 | INFO     | adding to output.list: log.38776125._016311.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/f5/log.38776125._016311.job.log.tg
[2024-05-18 11:26:59] 2024-05-18 18:26:31,660 | INFO     | summary of transferred files:
[2024-05-18 11:26:59] 2024-05-18 18:26:31,660 | INFO     |  -- lfn=log.38776125._016311.job.log.tgz.1, status_code=0, status=transferred
[2024-05-18 11:26:59] 2024-05-18 18:26:31,660 | INFO     | stage-out finished correctly
[2024-05-18 11:26:59] 2024-05-18 18:26:31,668 | INFO     | monitor loop #271: job 0:6208653884 is in state 'finished'
[2024-05-18 11:26:59] 2024-05-18 18:26:31,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 11:26:59] 2024-05-18 18:26:32,237 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-05-18 11:26:59] 2024-05-18 18:26:33,403 | INFO     | job 6208653884 has state=finished
[2024-05-18 11:26:59] 2024-05-18 18:26:33,403 | INFO     | preparing for final server update for job 6208653884 in state='finished'
[2024-05-18 11:26:59] 2024-05-18 18:26:33,404 | INFO     | this job has now completed (state=finished)
[2024-05-18 11:26:59] 2024-05-18 18:26:33,404 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-05-18 11:26:59] 2024-05-18 18:26:33,404 | INFO     | job 6208653884 has finished - writing final server update
[2024-05-18 11:26:59] 2024-05-18 18:26:33,404 | INFO     | total number of processed events: 400 (read)
[2024-05-18 11:26:59] 2024-05-18 18:26:33,409 | INFO     | executing command: lscpu
[2024-05-18 11:26:59] 2024-05-18 18:26:33,447 | INFO     | found 48 cores (24 cores per socket, 2 sockets)
[2024-05-18 11:26:59] 2024-05-18 18:26:33,448 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-05-18 11:26:59] 2024-05-18 18:26:33,494 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-05-18 11:26:59] 2024-05-18 18:26:34,198 | INFO     | monitor loop #272: job 0:6208653884 is in state 'finished'
[2024-05-18 11:26:59] 2024-05-18 18:26:34,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 11:26:59] 2024-05-18 18:26:36,701 | INFO     | monitor loop #273: job 0:6208653884 is in state 'finished'
[2024-05-18 11:26:59] 2024-05-18 18:26:36,701 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-05-18 11:26:59] 2024-05-18 18:26:36,739 | INFO     | CPU arch script returned: x86-64-v4
[2024-05-18 11:26:59] 2024-05-18 18:26:36,740 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6208653884/memory_monitor_summary.json (trf name=prmon)
[2024-05-18 11:26:59] 2024-05-18 18:26:36,741 | INFO     | extracted standard info from prmon json
[2024-05-18 11:26:59] 2024-05-18 18:26:36,741 | INFO     | extracted standard memory fields from prmon json
[2024-05-18 11:26:59] 2024-05-18 18:26:36,741 | WARNING  | GPU info not found in prmon json
[2024-05-18 11:26:59] 2024-05-18 18:26:36,741 | WARNING  | format EVNTtoHITS has no such key: dbData
[2024-05-18 11:26:59] 2024-05-18 18:26:36,741 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2024-05-18 11:26:59] 2024-05-18 18:26:36,742 | INFO     | fitting pss+swap vs Time
[2024-05-18 11:26:59] 2024-05-18 18:26:36,742 | INFO     | model: linear, x: [1716053687.0, 1716053748.0, 1716053809.0, 1716053870.0, 1716053931.0, 1716053992.0, 1716054053.0, 1716054114.0, 1716054175.0, 1716054236.0, 1716
[2024-05-18 11:26:59] 2024-05-18 18:26:36,742 | INFO     | sum of square deviations: 36465800.0
[2024-05-18 11:26:59] 2024-05-18 18:26:36,742 | INFO     | sum of deviations: 14207786391.0
[2024-05-18 11:26:59] 2024-05-18 18:26:36,742 | INFO     | mean x: 1716055151.0
[2024-05-18 11:26:59] 2024-05-18 18:26:36,742 | INFO     | mean y: 2675381.3061224488
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | -- intersect: -668605857012.9714
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | intersect: -668605857012.9714
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | chi2: 2.2112825364399398
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | -- intersect: -668605857012.9714
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | current memory leak: 389.62 B/s (using 49 data points, chi2=2.21)
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | ..............................
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | . Timing measurements:
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | . get job = 0 s
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | . initial setup = 2 s
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | . payload setup = 5 s
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | . stage-in = 0 s
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | . payload execution = 3407 s
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | . stage-out = 0 s
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | . log creation = 0 s
[2024-05-18 11:26:59] 2024-05-18 18:26:36,743 | INFO     | ..............................
[2024-05-18 11:26:59] 2024-05-18 18:26:36,791 | INFO     | 
[2024-05-18 11:26:59] 2024-05-18 18:26:36,792 | INFO     | job summary report
[2024-05-18 11:26:59] 2024-05-18 18:26:36,792 | INFO     | --------------------------------------------------
[2024-05-18 11:26:59] 2024-05-18 18:26:36,792 | INFO     | PanDA job id: 6208653884
[2024-05-18 11:26:59] 2024-05-18 18:26:36,792 | INFO     | task id: 38776125
[2024-05-18 11:26:59] 2024-05-18 18:26:36,792 | INFO     | errors: (none)
[2024-05-18 11:26:59] 2024-05-18 18:26:36,792 | INFO     | status: LOG_TRANSFER = DONE 
[2024-05-18 11:26:59] 2024-05-18 18:26:36,792 | INFO     | pilot state: finished 
[2024-05-18 11:26:59] 2024-05-18 18:26:36,793 | INFO     | transexitcode: 0
[2024-05-18 11:26:59] 2024-05-18 18:26:36,793 | INFO     | exeerrorcode: 0
[2024-05-18 11:26:59] 2024-05-18 18:26:36,793 | INFO     | exeerrordiag: 
[2024-05-18 11:26:59] 2024-05-18 18:26:36,793 | INFO     | exitcode: 0
[2024-05-18 11:26:59] 2024-05-18 18:26:36,793 | INFO     | exitmsg: OK
[2024-05-18 11:26:59] 2024-05-18 18:26:36,793 | INFO     | cpuconsumptiontime: 30003 s
[2024-05-18 11:26:59] 2024-05-18 18:26:36,793 | INFO     | nevents: 400
[2024-05-18 11:26:59] 2024-05-18 18:26:36,793 | INFO     | neventsw: 0
[2024-05-18 11:26:59] 2024-05-18 18:26:36,793 | INFO     | pid: 104168
[2024-05-18 11:26:59] 2024-05-18 18:26:36,794 | INFO     | pgrp: 104168
[2024-05-18 11:26:59] 2024-05-18 18:26:36,794 | INFO     | corecount: 12
[2024-05-18 11:26:59] 2024-05-18 18:26:36,794 | INFO     | event service: False
[2024-05-18 11:26:59] 2024-05-18 18:26:36,794 | INFO     | sizes: {0: 2392195, 4: 2392401, 11: 2392429, 3416: 2418045, 3418: 2426999, 3419: 2427055, 3424: 2427353}
[2024-05-18 11:26:59] 2024-05-18 18:26:36,794 | INFO     | --------------------------------------------------
[2024-05-18 11:26:59] 2024-05-18 18:26:36,794 | INFO     | 
[2024-05-18 11:26:59] 2024-05-18 18:26:36,794 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2024-05-18 11:26:59] 2024-05-18 18:26:36,817 | INFO     | queue jobs had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,817 | INFO     | queue payloads had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,817 | INFO     | queue data_in had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,817 | INFO     | queue data_out had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,819 | INFO     | queue completed_jobids has 1 job(s)
[2024-05-18 11:26:59] 2024-05-18 18:26:36,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,819 | INFO     | queue messages had 0 job(s) [purged]
[2024-05-18 11:26:59] 2024-05-18 18:26:36,819 | INFO     | job 6208653884 has completed (purged errors)
[2024-05-18 11:26:59] 2024-05-18 18:26:36,819 | INFO     | overall cleanup function is called
[2024-05-18 11:26:59] 2024-05-18 18:26:37,826 | INFO     | --- collectZombieJob: --- 10, [104168]
[2024-05-18 11:26:59] 2024-05-18 18:26:37,826 | INFO     | zombie collector waiting for pid 104168
[2024-05-18 11:26:59] 2024-05-18 18:26:37,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-05-18 11:26:59] 2024-05-18 18:26:38,832 | INFO     | collected zombie processes
[2024-05-18 11:26:59] 2024-05-18 18:26:38,832 | INFO     | will now attempt to kill all subprocesses of pid=104168
[2024-05-18 11:26:59] 2024-05-18 18:26:38,990 | INFO     | process IDs to be killed: [104168] (in reverse order)
[2024-05-18 11:26:59] 2024-05-18 18:26:39,107 | WARNING  | found no corresponding commands to process id(s)
[2024-05-18 11:26:59] 2024-05-18 18:26:39,108 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-05-18 11:26:59] 2024-05-18 18:26:39,115 | INFO     | did not find any defunct processes belonging to 104168
[2024-05-18 11:26:59] 2024-05-18 18:26:39,120 | INFO     | did not find any defunct processes belonging to 104168
[2024-05-18 11:26:59] 2024-05-18 18:26:39,121 | INFO     | ready for new job
[2024-05-18 11:26:59] 2024-05-18 18:26:39,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-05-18 11:26:59] 2024-05-18 18:26:39,122 | INFO     | *************************************
[2024-05-18 11:26:59] 2024-05-18 18:26:39,122 | INFO     | ***  PanDA Pilot version 3.7.5.4  ***
[2024-05-18 11:26:59] 2024-05-18 18:26:39,122 | INFO     | *************************************
[2024-05-18 11:26:59] 2024-05-18 18:26:39,122 | INFO     | 
[2024-05-18 11:26:59] 2024-05-18 18:26:39,125 | INFO     | architecture information:
[2024-05-18 11:26:59] 2024-05-18 18:26:39,125 | INFO     | executing command: cat /etc/os-release
[2024-05-18 11:26:59] 2024-05-18 18:26:39,144 | INFO     | cat /etc/os-release:
[2024-05-18 11:26:59] NAME="CentOS Linux"
[2024-05-18 11:26:59] VERSION="7 (Core)"
[2024-05-18 11:26:59] ID="centos"
[2024-05-18 11:26:59] ID_LIKE="rhel fedora"
[2024-05-18 11:26:59] VERSION_ID="7"
[2024-05-18 11:26:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-05-18 11:26:59] ANSI_COLOR="0;31"
[2024-05-18 11:26:59] CPE_NAME="cpe:/o:centos:centos:7"
[2024-05-18 11:26:59] HOME_URL="https://www.centos.org/"
[2024-05-18 11:26:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-05-18 11:26:59] 
[2024-05-18 11:26:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-05-18 11:26:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-05-18 11:26:59] REDHAT_SUPPORT_PRODUCT="centos"
[2024-05-18 11:26:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-05-18 11:26:59] 
[2024-05-18 11:26:59] 2024-05-18 18:26:39,144 | INFO     | *************************************
[2024-05-18 11:26:59] 2024-05-18 18:26:39,647 | INFO     | executing command: df -mP /home/boinc/slots/0
[2024-05-18 11:26:59] 2024-05-18 18:26:39,670 | INFO     | sufficient remaining disk space (2208368164864 B)
[2024-05-18 11:26:59] 2024-05-18 18:26:39,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-05-18 11:26:59] 2024-05-18 18:26:39,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-05-18 11:26:59] 2024-05-18 18:26:39,671 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-05-18 11:26:59] 2024-05-18 18:26:39,671 | INFO     | found 0 job(s) in 20 queues
[2024-05-18 11:26:59] 2024-05-18 18:26:39,671 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-05-18 11:26:59] 2024-05-18 18:26:39,671 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-05-18 11:26:59] 2024-05-18 18:26:39,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-05-18 11:26:59] 2024-05-18 18:26:39,886 | INFO     | all payload control threads have been joined
[2024-05-18 11:26:59] 2024-05-18 18:26:40,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-05-18 11:26:59] 2024-05-18 18:26:40,209 | INFO     | aborting loop
[2024-05-18 11:26:59] 2024-05-18 18:26:40,608 | INFO     | all data control threads have been joined
[2024-05-18 11:26:59] 2024-05-18 18:26:40,676 | INFO     | [job] retrieve thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:40,788 | INFO     | [job] validate thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:40,831 | INFO     | all job control threads have been joined
[2024-05-18 11:26:59] 2024-05-18 18:26:40,880 | INFO     | [job] create_data_payload thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:40,892 | INFO     | [payload] control thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:41,084 | INFO     | [payload] failed_post thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:41,151 | INFO     | [payload] validate_pre thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:41,174 | INFO     | [payload] execute_payloads thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:41,215 | INFO     | [job] job monitor thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:41,614 | INFO     | [data] control thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:41,726 | INFO     | [data] copytool_out thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:41,799 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-05-18 11:26:59] 2024-05-18 18:26:41,836 | INFO     | [job] control thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:41,964 | INFO     | [payload] validate_post thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:42,002 | INFO     | [data] copytool_in thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:42,804 | INFO     | [job] queue monitor thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:42,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-05-18 11:26:59] 2024-05-18 18:26:46,811 | INFO     | [data] queue_monitor thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:50,338 | INFO     | job.realtimelogging is not enabled
[2024-05-18 11:26:59] 2024-05-18 18:26:51,340 | INFO     | [payload] run_realtimelog thread has finished
[2024-05-18 11:26:59] 2024-05-18 18:26:53,136 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110251788096)>', '<ExcThread(monitor, started 140109978511104)>']
[2024-05-18 11:26:59] 2024-05-18 18:26:53,735 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-05-18 11:26:59] 2024-05-18 18:26:53,736 | INFO     | [monitor] control thread has ended
[2024-05-18 11:26:59] 2024-05-18 18:26:58,139 | INFO     | all workflow threads have been joined
[2024-05-18 11:26:59] 2024-05-18 18:26:58,139 | INFO     | end of generic workflow (traces error code: 0)
[2024-05-18 11:26:59] 2024-05-18 18:26:58,139 | INFO     | traces error code: 0
[2024-05-18 11:26:59] 2024-05-18 18:26:58,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-05-18 11:26:59] 2024-05-18 18:26:58,228 [wrapper] ==== pilot stdout END ====
[2024-05-18 11:26:59] 2024-05-18 18:26:58,233 [wrapper] ==== wrapper stdout RESUME ====
[2024-05-18 11:26:59] 2024-05-18 18:26:58,237 [wrapper] pilotpid: 97694
[2024-05-18 11:26:59] 2024-05-18 18:26:58,240 [wrapper] Pilot exit status: 0
[2024-05-18 11:26:59] 2024-05-18 18:26:58,252 [wrapper] pandaids: 6208653884
[2024-05-18 11:26:59] 2024-05-18 18:26:58,333 [wrapper] cleanup: SIGTERM to supervisor_pilot  37253 97695
[2024-05-18 11:26:59] 2024-05-18 18:26:58,337 [wrapper] Test setup, not cleaning
[2024-05-18 11:26:59] 2024-05-18 18:26:58,342 [wrapper] ==== wrapper stdout END ====
[2024-05-18 11:26:59] 2024-05-18 18:26:58,345 [wrapper] ==== wrapper stderr END ====
[2024-05-18 11:26:59] 2024-05-18 18:26:58,352 [wrapper] apfmon messages muted
[2024-05-18 11:26:59]  *** Error codes and diagnostics ***
[2024-05-18 11:26:59]     "exeErrorCode": 0,
[2024-05-18 11:26:59]     "exeErrorDiag": "",
[2024-05-18 11:26:59]     "pilotErrorCode": 0,
[2024-05-18 11:26:59]     "pilotErrorDiag": "",
[2024-05-18 11:26:59]  *** Listing of results directory ***
[2024-05-18 11:26:59] total 823976
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc      5633 May 18 02:06 queuedata.json
[2024-05-18 11:26:59] -rwx------ 1 boinc boinc     32251 May 18 02:07 runpilot2-wrapper.sh
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc    467845 May 18 02:07 pilot3.tar.gz
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc       100 May 18 10:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-05-18 11:26:59] -rwxr-xr-x 1 boinc boinc      7986 May 18 10:29 run_atlas
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc       105 May 18 10:29 job.xml
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc      6626 May 18 10:29 init_data.xml
[2024-05-18 11:26:59] -rw-r--r-- 2 boinc boinc 597756049 May 18 10:29 EVNT.38776119._000469.pool.root.1
[2024-05-18 11:26:59] -rw-r--r-- 2 boinc boinc     17537 May 18 10:29 start_atlas.sh
[2024-05-18 11:26:59] drwxrwx--x 2 boinc boinc      4096 May 18 10:29 shared
[2024-05-18 11:26:59] -rw-r--r-- 2 boinc boinc    480004 May 18 10:29 input.tar.gz
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc         0 May 18 10:29 boinc_lockfile
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc      2635 May 18 10:29 pandaJob.out
[2024-05-18 11:26:59] -rw------- 1 boinc boinc       424 May 18 10:29 setup.sh.local
[2024-05-18 11:26:59] -rw------- 1 boinc boinc   1019065 May 18 10:29 agis_schedconf.cvmfs.json
[2024-05-18 11:26:59] -rw------- 1 boinc boinc         0 May 18 10:29 agis_ddmendpoints.agis.ALL.json
[2024-05-18 11:26:59] -rw------- 1 boinc boinc   1324701 May 18 10:29 cric_ddmendpoints.json
[2024-05-18 11:26:59] drwx------ 4 boinc boinc      4096 May 18 10:29 pilot3
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc       530 May 18 11:25 boinc_task_state.xml
[2024-05-18 11:26:59] -rw------- 1 boinc boinc 241062401 May 18 11:25 HITS.38776125._016311.pool.root.1
[2024-05-18 11:26:59] -rw------- 1 boinc boinc        95 May 18 11:26 pilot_heartbeat.json
[2024-05-18 11:26:59] -rw------- 1 boinc boinc      1053 May 18 11:26 memory_monitor_summary.json
[2024-05-18 11:26:59] -rw------- 1 boinc boinc    344701 May 18 11:26 log.38776125._016311.job.log.tgz.1
[2024-05-18 11:26:59] -rw------- 1 boinc boinc      7781 May 18 11:26 heartbeat.json
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc      8192 May 18 11:26 boinc_mmap_file
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc        27 May 18 11:26 wrapper_checkpoint.txt
[2024-05-18 11:26:59] -rw------- 1 boinc boinc      4405 May 18 11:26 pilotlog.txt
[2024-05-18 11:26:59] -rw------- 1 boinc boinc    354073 May 18 11:26 log.38776125._016311.job.log.1
[2024-05-18 11:26:59] -rw------- 1 boinc boinc       357 May 18 11:26 output.list
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc       620 May 18 11:26 runtime_log
[2024-05-18 11:26:59] -rw------- 1 boinc boinc    716800 May 18 11:26 result.tar.gz
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc     11286 May 18 11:26 runtime_log.err
[2024-05-18 11:26:59] -rw------- 1 boinc boinc       651 May 18 11:26 DxpMDm8CVS5nsSi4apGgGQJmABFKDmABFKDm4ySLDmeOSKDmAMZUom.diag
[2024-05-18 11:26:59] -rw-r--r-- 1 boinc boinc     21708 May 18 11:26 stderr.txt
[2024-05-18 11:26:59] HITS file was successfully produced:
[2024-05-18 11:26:59] -rw------- 1 boinc boinc 241062401 May 18 11:25 shared/HITS.pool.root.1
[2024-05-18 11:26:59]  *** Contents of shared directory: ***
[2024-05-18 11:26:59] total 820364
[2024-05-18 11:26:59] -rw-r--r-- 2 boinc boinc 597756049 May 18 10:29 ATLAS.root_0
[2024-05-18 11:26:59] -rw-r--r-- 2 boinc boinc     17537 May 18 10:29 start_atlas.sh
[2024-05-18 11:26:59] -rw-r--r-- 2 boinc boinc    480004 May 18 10:29 input.tar.gz
[2024-05-18 11:26:59] -rw------- 1 boinc boinc 241062401 May 18 11:25 HITS.pool.root.1
[2024-05-18 11:26:59] -rw------- 1 boinc boinc    716800 May 18 11:26 result.tar.gz
11:27:00 (93491): run_atlas exited; CPU time 29901.997473
11:27:00 (93491): called boinc_finish(0)

</stderr_txt>
]]>

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